Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : EPS7 | Genbank acc : NC_010583

Category to which the Query Phage was assigned : Siphoviridae of Type1 (Cluster 4) (Read more about that category)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 170

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	160	lcl\|NC_010583.1_cdsid_YP_001837083.1	HHsearch (proba=100.00%)
Portal	163	lcl\|NC_010583.1_cdsid_YP_001837086.1	HHsearch (proba=100.00%)
TermL	165	lcl\|NC_010583.1_cdsid_YP_001837088.1	Blast (e-value=0)
MTP	162	lcl\|NC_010583.1_cdsid_YP_001837085.1	Blast (e-value=1e-20)
Sheath	NOT FOUND
Ad1	159	lcl\|NC_010583.1_cdsid_YP_001837082.1	HHsearch (proba=100.00%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	157	lcl\|NC_010583.1_cdsid_YP_001837080.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:104256 protein:vir:485 protein:vir:81227	T5 P27 BFK20	90 % 19 % 19 %
Portal	protein:vir:104259 protein:vir:81152 protein:vir:102118	T5 Geobacillus virus E2 phiSM101	97 % 21 % 20 %
TermL	protein:vir:104262 protein:vir:9870 protein:vir:102238	T5 315.5 PBI1	96 % 24 % 22 %
MTP	protein:vir:93600 protein:vir:196 protein:vir:105771	phi 4795 HK97 ES18	35 % 34 % 21 %
Ad1	protein:vir:104255 protein:vir:4512 protein:vir:1271	T5 V phi-105	88 % 21 % 22 %
Tc1	protein:vir:104224 protein:vir:79571 protein:vir:3428	T5 cdtI lambda	93 % 24 % 28 %