Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 56 lcl|Aclame:protein:vir:93616|NCBI_annot:putative HHsearch (proba=100.00%)
Portal 58 lcl|Aclame:protein:vir:93610|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 55 lcl|Aclame:protein:vir:93598|NCBI_annot:putative Blast (e-value=0)
MTP 64 lcl|Aclame:protein:vir:93600|NCBI_annot:putative Blast (e-value=1e-170)
Sheath NOT FOUND
Ad1 60 lcl|Aclame:protein:vir:93592|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Hc1 61 lcl|Aclame:protein:vir:93599|NCBI_annot:putative HHsearch (proba=100.00%)
Ne1 62 lcl|Aclame:protein:vir:93617|NCBI_annot:putative HHsearch (proba=100.00%)
Tc1 63 lcl|Aclame:protein:vir:93602|NCBI_annot:putative HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:93616
protein:vir:80376
protein:vir:1433
phi 4795
phi644-2
phiE125
100 %
24 %
23 %
Portal protein:vir:93610
protein:vir:100150
protein:vir:105064
phi 4795
phi1026b
phiKO2
100 %
25 %
24 %
TermL protein:vir:93598
protein:vir:100250
protein:vir:97071
phi 4795
Bcep176
OP1
100 %
58 %
48 %
MTP protein:vir:93600
protein:vir:196
protein:vir:80349
phi 4795
HK97
phi644-2
100 %
67 %
32 %
Ad1 protein:vir:93592
protein:vir:4458
protein:vir:81159
phi 4795
ST64B
Geobacillus virus E2
100 %
25 %
24 %
Hc1 protein:vir:93599
protein:vir:193
protein:vir:1890
phi 4795
HK97
HK022
100 %
45 %
25 %
Ne1 protein:vir:93617
protein:vir:194
protein:vir:100243
phi 4795
HK97
Bcep176
100 %
76 %
43 %
Tc1 protein:vir:93602
protein:vir:195
protein:vir:100242
phi 4795
HK97
Bcep176
100 %
49 %
27 %