Virfam_CNT_anal:NC_021347

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : E3 | Genbank acc : NC_021347

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 220

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	82	lcl\|NC_021347.1_cdsid_YP_008061120.1	HHsearch (proba=98.86%)
Portal	75	lcl\|NC_021347.1_cdsid_YP_008061113.1	HHsearch (proba=99.84%)
TermL	5	lcl\|NC_021347.1_cdsid_YP_008061043.1	Blast (e-value=0)
MTP	NOT FOUND
Sheath	115	lcl\|NC_021347.1_cdsid_YP_008061153.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	113	lcl\|NC_021347.1_cdsid_YP_008061151.1	HHsearch (proba=96.56%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:100247 protein:vir:96123 protein:vir:96833	Bcep176 37 EW	17 % 15 % 17 %
Portal	protein:vir:105154 protein:vir:79538 protein:vir:95542	C-St cdtI F10	14 % 13 % 15 %
TermL	protein:vir:7745 protein:vir:107279 protein:vir:98727	Bxz1 Catera Ma-LMM01	49 % 42 % 19 %
Sheath	protein:vir:107310 protein:vir:7653 protein:vir:100829	Catera Bxz1 LP65	45 % 45 % 18 %
Ne1	protein:vir:106041 protein:vir:97982 protein:vir:107545	Cooper Orion PG1	25 % 16 % 16 %