Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : Breezona | Genbank acc : NC_021296

Category to which the Query Phage was assigned : Siphoviridae of Type1 (Cluster 10) (Read more about that category)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 132

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	8	lcl\|NC_021296.1_cdsid_YP_008050641.1	HHsearch (proba=100.00%)
Portal	5	lcl\|NC_021296.1_cdsid_YP_008050638.1	HHsearch (proba=100.00%)
TermL	4	lcl\|NC_021296.1_cdsid_YP_008050637.1	Blast (e-value=1e-64)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	9	lcl\|NC_021296.1_cdsid_YP_008050642.1	HHsearch (proba=100.00%)
Hc1	NOT FOUND
Ne1	11	lcl\|NC_021296.1_cdsid_YP_008050644.1	HHsearch (proba=94.69%)
Tc1	12	lcl\|NC_021296.1_cdsid_YP_008050645.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:99075 protein:vir:102605 protein:vir:105822	Wildcat Llij PMC	41 % 21 % 21 %
Portal	protein:vir:99072 protein:vir:2500 protein:vir:104082	Wildcat TM4 Che12	34 % 29 % 21 %
TermL	protein:vir:99071 protein:vir:8098 protein:vir:80678	Wildcat Che9c PA6	33 % 27 % 26 %
Ad1	protein:vir:99002 protein:vir:94761 protein:vir:1640	Wildcat phi LC3 r1t	35 % 24 % 24 %
Ne1	protein:vir:99004 protein:vir:95062 protein:vir:97327	Wildcat X2 52A	24 % 12 % 14 %
Tc1	protein:vir:99005 protein:vir:98426 protein:vir:102609	Wildcat VWB Llij	35 % 19 % 19 %