Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : Butters | Genbank acc : NC_021061

Category to which the Query Phage was assigned : Siphoviridae of Type1 (Cluster 4) (Read more about that category)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 66

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	6	lcl\|NC_021061.1_cdsid_YP_007869817.1	HHsearch (proba=100.00%)
Portal	4	lcl\|NC_021061.1_cdsid_YP_007869815.1	HHsearch (proba=100.00%)
TermL	2	lcl\|NC_021061.1_cdsid_YP_007869813.1	Blast (e-value=1e-180)
MTP	13	lcl\|NC_021061.1_cdsid_YP_007869824.1	Blast (e-value=4e-33)
Sheath	NOT FOUND
Ad1	8	lcl\|NC_021061.1_cdsid_YP_007869819.1	HHsearch (proba=100.00%)
Hc1	9	lcl\|NC_021061.1_cdsid_YP_007869820.1	HHsearch (proba=100.00%)
Ne1	11	lcl\|NC_021061.1_cdsid_YP_007869822.1	HHsearch (proba=99.93%)
Tc1	12	lcl\|NC_021061.1_cdsid_YP_007869823.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:4339 protein:vir:1886 protein:vir:191	D3 HK022 HK97	29 % 29 % 29 %
Portal	protein:vir:81218 protein:vir:80333 protein:vir:1431	BFK20 phi644-2 phiE125	35 % 27 % 26 %
TermL	protein:vir:8098 protein:vir:99915 protein:vir:99071	Che9c Halo Wildcat	62 % 28 % 27 %
MTP	protein:vir:8332 protein:vir:102610 protein:vir:105827	Corndog Llij PMC	40 % 32 % 32 %
Ad1	protein:vir:8104 protein:vir:8326 protein:vir:8430	Che9c Corndog Omega	42 % 37 % 32 %
Hc1	protein:vir:8328 protein:vir:8431 protein:vir:8105	Corndog Omega Che9c	50 % 46 % 44 %
Ne1	protein:vir:8330 protein:vir:8106 protein:vir:7993	Corndog Che9c Che8	37 % 34 % 29 %
Tc1	protein:vir:8331 protein:vir:102609 protein:vir:105826	Corndog Llij PMC	43 % 34 % 34 %