Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : wV8 | Genbank acc : NC_012749

Category to which the Query Phage was assigned : Myoviridae of Type1 (Cluster 7) (Read more about that category)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 140

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	66	lcl\|NC_012749.1_cdsid_YP_002922847.1	HHsearch (proba=100.00%)
Portal	60	lcl\|NC_012749.1_cdsid_YP_002922841.1	HHsearch (proba=100.00%)
TermL	59	lcl\|NC_012749.1_cdsid_YP_002922840.1	Blast (e-value=0)
MTP	41	lcl\|NC_012749.1_cdsid_YP_002922822.1	Blast (e-value=4e-11)
Sheath	71	lcl\|NC_012749.1_cdsid_YP_002922852.1	HHsearch (proba=100.00%)
Ad1	67	lcl\|NC_012749.1_cdsid_YP_002922848.1	HHsearch (proba=100.00%)
Hc1	69	lcl\|NC_012749.1_cdsid_YP_002922850.1	HHsearch (proba=100.00%)
Ne1	68	lcl\|NC_012749.1_cdsid_YP_002922849.1	HHsearch (proba=100.00%)
Tc1	70	lcl\|NC_012749.1_cdsid_YP_002922851.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:95258 protein:vir:10324 protein:vir:2736	Felix 01 VHML O1205	97 % 29 % 15 %
Portal	protein:vir:95254 protein:vir:78161 protein:vir:108215	Felix 01 Min1 Giles	100 % 21 % 19 %
TermL	protein:vir:95253 protein:vir:97250 protein:vir:103223	Felix 01 M6 JK06	100 % 21 % 21 %
MTP	protein:vir:105771 protein:vir:93600 protein:vir:196	ES18 phi 4795 HK97	30 % 18 % 17 %
Sheath	protein:vir:95263 protein:vir:80052 protein:vir:5260	Felix 01 B054 Aaphi23	94 % 23 % 18 %
Ad1	protein:vir:95259	Felix 01	100 %
Hc1	protein:vir:95261 protein:vir:5258 protein:vir:99571	Felix 01 Aaphi23 BcepF1	97 % 21 % 15 %
Ne1	protein:vir:95260 protein:vir:107757 protein:vir:5257	Felix 01 BcepB1A Aaphi23	82 % 23 % 22 %
Tc1	protein:vir:95262	Felix 01	99 %