Virfam_CNT_anal:NC_019515

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : BCD7 | Genbank acc : NC_019515

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 140

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	100	lcl\|NC_019515.1_cdsid_YP_007005951.1	HHsearch (proba=100.00%)
Portal	103	lcl\|NC_019515.1_cdsid_YP_007005954.1	HHsearch (proba=100.00%)
TermL	104	lcl\|NC_019515.1_cdsid_YP_007005955.1	Blast (e-value=2e-07)
MTP	NOT FOUND
Sheath	93	lcl\|NC_019515.1_cdsid_YP_007005944.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	96	lcl\|NC_019515.1_cdsid_YP_007005947.1	HHsearch (proba=97.89%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	80	lcl\|NC_019515.1_cdsid_YP_007005931.1	HHsearch (proba=72.25%)
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:93696 protein:vir:95107 protein:vir:80930	Bcep22 X2 A500	21 % 19 % 17 %
Portal	protein:vir:7430 protein:vir:2732 protein:vir:97447	Barnyard O1205 92	17 % 17 % 17 %
TermL	protein:vir:79447 protein:vir:78016 protein:vir:105086	P74-26 P23-45 phiKO2	18 % 18 % 18 %
Sheath	protein:vir:6594 protein:vir:80984 protein:vir:79092	RB49 Phi1 phiE255	23 % 22 % 21 %
Ne1	protein:vir:194 protein:vir:1273 protein:vir:80362	HK97 phi-105 phi644-2	22 % 20 % 17 %
Ad3	protein:vir:103305	Era103	19 %