Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : P23-45 | Genbank acc : NC_009803 | Aclame index mge :1843

Category to which the Query Phage was assigned :

The queried phage could not be assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 117

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	89	lcl\|Aclame:protein:vir:78006\|NCBI_annot:major	HHsearch (proba=100.00%)
Portal	86	lcl\|Aclame:protein:vir:77981\|NCBI_annot:portal	HHsearch (proba=100.00%)
TermL	85	lcl\|Aclame:protein:vir:78016\|NCBI_annot:terminase	Blast (e-value=0)
MTP	94	lcl\|Aclame:protein:vir:77982\|NCBI_annot:conserved	Blast (e-value=0)
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:79503 protein:vir:78006 protein:vir:4902	P74-26 P23-45 Sfi11	100 % 100 % 18 %
Portal	protein:vir:77981 protein:vir:79511 protein:vir:78161	P23-45 P74-26 Min1	98 % 96 % 22 %
TermL	protein:vir:79447 protein:vir:78016 protein:vir:108053	P74-26 P23-45 JS98	100 % 100 % 21 %
MTP	protein:vir:79424 protein:vir:77982 protein:vir:95133	P74-26 P23-45 PA73	100 % 100 % 20 %