Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 10 lcl|NC_019423.1_cdsid_YP_006990615.1 HHsearch (proba=100.00%)
Portal 7 lcl|NC_019423.1_cdsid_YP_006990612.1 HHsearch (proba=100.00%)
TermL 88 lcl|NC_019423.1_cdsid_YP_006990693.1 Blast (e-value=0)
MTP 56 lcl|NC_019423.1_cdsid_YP_006990661.1 Blast (e-value=0.0001)
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 89 lcl|NC_019423.1_cdsid_YP_006990694.1 HHsearch (proba=100.00%)
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:95875
protein:vir:3613
protein:vir:97433
N4
TP901-1
92
90 %
16 %
16 %
Portal protein:vir:95821
protein:vir:8846
protein:vir:94599
N4
PaP3
Pf-WMP4
71 %
17 %
16 %
TermL protein:vir:95873
protein:vir:103223
protein:vir:78718
N4
JK06
Syn5
83 %
20 %
18 %
MTP protein:vir:196
protein:vir:93600
protein:vir:105771
HK97
phi 4795
ES18
20 %
16 %
12 %
Ad3 protein:vir:95880
protein:vir:5111
protein:vir:105573
N4
PBC5
F116
56 %
15 %
13 %