Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 91 lcl|NC_011272.1_cdsid_YP_002224789.1 HHsearch (proba=98.89%)
Portal 83 lcl|NC_011272.1_cdsid_YP_002224781.1 HHsearch (proba=100.00%)
TermL 207 lcl|NC_011272.1_cdsid_YP_002224905.1 Blast (e-value=0)
MTP NOT FOUND
Sheath 117 lcl|NC_011272.1_cdsid_YP_002224815.1 HHsearch (proba=100.00%)
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 115 lcl|NC_011272.1_cdsid_YP_002224813.1 HHsearch (proba=76.27%)
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:96833
protein:vir:9820
protein:vir:3033
EW
315.4
PhiNIH1.1
18 %
17 %
17 %
Portal protein:vir:105154
protein:vir:95542
protein:vir:79538
C-St
F10
cdtI
14 %
16 %
15 %
TermL protein:vir:107279
protein:vir:7745
protein:vir:98727
Catera
Bxz1
Ma-LMM01
99 %
99 %
19 %
Sheath protein:vir:107310
protein:vir:7653
protein:vir:80488
Catera
Bxz1
A511
100 %
100 %
18 %
Ne1 protein:vir:97982
protein:vir:107545
protein:vir:94654
Orion
PG1
mu1/6
22 %
22 %
30 %