Virfam_CNT_anal:NC_010811

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : RSL1 | Genbank acc : NC_010811

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 343

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	136	lcl\|NC_010811.2_cdsid_YP_001950011.1	HHsearch (proba=98.95%)
Portal	109	lcl\|NC_010811.2_cdsid_YP_001949983.1	HHsearch (proba=99.86%)
TermL	NOT FOUND
MTP	142	lcl\|NC_010811.2_cdsid_YP_001950017.1	Blast (e-value=3e-07)
Sheath	140	lcl\|NC_010811.2_cdsid_YP_001950015.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	198	lcl\|NC_010811.2_cdsid_YP_001950077.1	HHsearch (proba=98.77%)
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:9820 protein:vir:3033 protein:vir:99749	315.4 PhiNIH1.1 phiETA2	11 % 11 % 13 %
Portal	protein:vir:78589 protein:vir:101541 protein:vir:3648	BcepNY3 Bcep43 Bcep781	27 % 27 % 27 %
MTP	protein:vir:103457 protein:vir:7207 protein:vir:6895	RB32 T4 RB69	23 % 23 % 23 %
Sheath	protein:vir:101187 protein:vir:100539 protein:vir:106427	44RR2.8t 25 Aeh1	23 % 23 % 23 %
Hc3	protein:vir:107802 protein:vir:98487 protein:vir:107423	BIP-1 BMP-1 BPP-1	17 % 17 % 17 %