Virfam_CNT_anal:NC_019931

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : KHP40 | Genbank acc : NC_019931

Category to which the Query Phage was assigned :

The queried phage was recognized as a Podoviridae of Type3 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

Click on the image to download it as png (download in pdf or svg format)

ERROR_IN_GENERATING_GENECONTEXT_FIGURE. Contact Webmaster.

Number of sequences analyzed : 32

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	15	lcl\|NC_019931.1_cdsid_YP_007237993.1	HHsearch (proba=100.00%)
Portal	18	lcl\|NC_019931.1_cdsid_YP_007237996.1	HHsearch (proba=100.00%)
TermL	20	lcl\|NC_019931.1_cdsid_YP_007237998.1	Blast (e-value=9e-24)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	12	lcl\|NC_019931.1_cdsid_YP_007237990.1	HHsearch (proba=98.57%)
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:93696 protein:vir:104439 protein:vir:10123	Bcep22 86 Stx2 converting bacteriophage II	18 % 16 % 16 %
Portal	protein:vir:93630 protein:vir:104437 protein:vir:10117	Bcep22 86 Stx2 converting bacteriophage II	18 % 18 % 18 %
TermL	protein:vir:2600 protein:vir:79648 protein:vir:104336	SIO1 TLS RTP	23 % 22 % 22 %
Ad3	protein:vir:3302 protein:vir:2779 protein:vir:823	933W Stx2 converting bacteriophage I VT2-Sa	17 % 17 % 17 %