Query lcl|NC_019931.1_cdsid_YP_007237990.1 [gene=G177_gp12] [protein=hypothetical protein] [protein_id=YP_007237990.1] [location=13471..14058] Match_columns 195 No_of_seqs 12 out of 14 Neff 2.9 Searched_HMMs 1612 Date Thu Nov 7 17:32:06 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_12 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_12_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3302 Length: 216 # 98.6 8.1E-09 5E-12 64.9 14.8 185 1-192 1-216 (216) 2 protein:vir:2779 Length: 216 # 98.6 8.1E-09 5E-12 64.9 14.8 185 1-192 1-216 (216) 3 protein:vir:823 Length: 216 # 98.6 8.1E-09 5E-12 64.9 14.8 185 1-192 1-216 (216) 4 protein:vir:5111 Length: 234 # 98.4 1.5E-08 9.5E-12 63.4 12.3 182 1-191 1-234 (234) 5 protein:vir:105573 Length: 225 97.9 8.4E-07 5.2E-10 53.9 12.7 189 2-195 1-220 (225) 6 protein:vir:93692 Length: 197 97.3 5.4E-06 3.4E-09 49.5 9.9 163 1-173 2-197 (197) 7 protein:vir:8841 Length: 208 # 83.1 0.071 4.4E-05 26.9 14.6 182 1-195 1-205 (208) 8 protein:vir:10130 Length: 223 69.8 0.22 0.00014 24.2 12.5 171 1-195 37-219 (223) 9 protein:vir:9964 Length: 223 # 69.8 0.22 0.00014 24.2 12.5 171 1-195 37-219 (223) 10 protein:vir:95880 Length: 236 29.3 1.7 0.001 19.4 10.6 177 1-195 1-230 (236) No 1 >protein:vir:3302 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049518;genbank:gi:9632524;genbank:GeneID:1262013 Probab=98.57 E-value=8.1e-09 Score=64.94 Aligned_cols=185 Identities=17% Similarity=0.112 Sum_probs=119.9 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc-----chhhhhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT-----INNLLGIESVK 75 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq-----~~nlLgi~~a~ 75 (195) |+.+.+||+++|..|+|. ..++|+|.|++|-+|-|.-+.|+- |=--+-+...+....--.| .-.++++... T Consensus 1 ~~t~~~lI~r~~~~l~D~--~~~rW~~~el~~~lNdAv~e~~l~-rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~- 76 (216) T protein:vir:33 1 MTTITEIIGRVNTQLVDP--MMVRWPLQELCDYYNDAVRAVILA-RPDAGASLETISCVPGARQVLPDGVIQLLDVICL- 76 (216) T ss_pred CccHHHHHHHHHHhhhcc--cccccChHHHHHHHHHHHHHHHhh-cCCCCcceeeEeccccccccccchhhhhhhhhhh- Confidence 999999999999999996 589999999999999999999965 2100111122222221112 1233444333 Q ss_pred hCCcchhhhccc----------ccCCCcEEEEEeCC---e---EEEcccccceEEEEEEeecc-c---c-chhhccCchH Q lcl|NC_019931. 76 LDKKEIESRNTI----------EKDTGELELLILSD---K---ISVTPFKNGELEVVYYTYEE-I---S-NILDTIKLPK 134 (195) Q Consensus 76 fN~kel~~r~s~----------ek~sgel~LlI~~D---k---lsvtPfk~G~LeVvy~~y~~-l---~-~~~~sl~lP~ 134 (195) -||+.+. +++. |..+|.-.-.|++| + +.=.|..+|.++.+|++-+. + . +-++.+++|. T Consensus 77 ~~g~a~~-~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:33 77 SDGSAVR-PLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCcee-eecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 2566653 1222 33567766789988 3 44478889999999998752 1 1 2233579999 Q ss_pred HHHHHHHHHHHHHHhcCCCCc-chhHHHHHHHHHHHHH---HHHHHHHHHHhh-ccCcceEEE Q lcl|NC_019931. 135 ICLDVLVYSVLCNLLEIPNNE-TNFSVLANYKQLLKLA---KDNLTNYLNLMY-SKNIHFSKV 192 (195) Q Consensus 135 i~~naLvy~~L~~LLEiptnE-~N~~~ia~YkqL~k~a---kn~L~~YLn~~y-sk~~~fskv 192 (195) +-.++|+..+|+.-+-+|..+ .|.|+=+..-|.+..+ |-...+-.|.+= +.+.. -| T Consensus 156 ~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~--~~ 216 (216) T protein:vir:33 156 AYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG--GV 216 (216) T ss_pred hhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC--CC Confidence 999999999999999999885 8888888887777653 222222222221 22222 11 No 2 >protein:vir:2779 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612896;genbank:gi:20065813;genbank:GeneID:935638 Probab=98.57 E-value=8.1e-09 Score=64.94 Aligned_cols=185 Identities=17% Similarity=0.112 Sum_probs=119.9 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc-----chhhhhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT-----INNLLGIESVK 75 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq-----~~nlLgi~~a~ 75 (195) |+.+.+||+++|..|+|. ..++|+|.|++|-+|-|.-+.|+- |=--+-+...+....--.| .-.++++... T Consensus 1 ~~t~~~lI~r~~~~l~D~--~~~rW~~~el~~~lNdAv~e~~l~-rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~- 76 (216) T protein:vir:27 1 MTTITEIIGRVNTQLVDP--MMVRWPLQELCDYYNDAVRAVILA-RPDAGASLETISCVPGARQVLPDGVIQLLDVICL- 76 (216) T ss_pred CccHHHHHHHHHHhhhcc--cccccChHHHHHHHHHHHHHHHhh-cCCCCcceeeEeccccccccccchhhhhhhhhhh- Confidence 999999999999999996 589999999999999999999965 2100111122222221112 1233444333 Q ss_pred hCCcchhhhccc----------ccCCCcEEEEEeCC---e---EEEcccccceEEEEEEeecc-c---c-chhhccCchH Q lcl|NC_019931. 76 LDKKEIESRNTI----------EKDTGELELLILSD---K---ISVTPFKNGELEVVYYTYEE-I---S-NILDTIKLPK 134 (195) Q Consensus 76 fN~kel~~r~s~----------ek~sgel~LlI~~D---k---lsvtPfk~G~LeVvy~~y~~-l---~-~~~~sl~lP~ 134 (195) -||+.+. +++. |..+|.-.-.|++| + +.=.|..+|.++.+|++-+. + . +-++.+++|. T Consensus 77 ~~g~a~~-~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:27 77 SDGSAVR-PLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCcee-eecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 2566653 1222 33567766789988 3 44478889999999998752 1 1 2233579999 Q ss_pred HHHHHHHHHHHHHHhcCCCCc-chhHHHHHHHHHHHHH---HHHHHHHHHHhh-ccCcceEEE Q lcl|NC_019931. 135 ICLDVLVYSVLCNLLEIPNNE-TNFSVLANYKQLLKLA---KDNLTNYLNLMY-SKNIHFSKV 192 (195) Q Consensus 135 i~~naLvy~~L~~LLEiptnE-~N~~~ia~YkqL~k~a---kn~L~~YLn~~y-sk~~~fskv 192 (195) +-.++|+..+|+.-+-+|..+ .|.|+=+..-|.+..+ |-...+-.|.+= +.+.. -| T Consensus 156 ~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~--~~ 216 (216) T protein:vir:27 156 AYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG--GV 216 (216) T ss_pred hhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC--CC Confidence 999999999999999999885 8888888887777653 222222222221 22222 11 No 3 >protein:vir:823 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050556;genbank:gi:9633453;genbank:GeneID:1262282 Probab=98.57 E-value=8.1e-09 Score=64.94 Aligned_cols=185 Identities=17% Similarity=0.112 Sum_probs=119.9 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc-----chhhhhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT-----INNLLGIESVK 75 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq-----~~nlLgi~~a~ 75 (195) |+.+.+||+++|..|+|. ..++|+|.|++|-+|-|.-+.|+- |=--+-+...+....--.| .-.++++... T Consensus 1 ~~t~~~lI~r~~~~l~D~--~~~rW~~~el~~~lNdAv~e~~l~-rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~- 76 (216) T protein:vir:82 1 MTTITEIIGRVNTQLVDP--MMVRWPLQELCDYYNDAVRAVILA-RPDAGASLETISCVPGARQVLPDGVIQLLDVICL- 76 (216) T ss_pred CccHHHHHHHHHHhhhcc--cccccChHHHHHHHHHHHHHHHhh-cCCCCcceeeEeccccccccccchhhhhhhhhhh- Confidence 999999999999999996 589999999999999999999965 2100111122222221112 1233444333 Q ss_pred hCCcchhhhccc----------ccCCCcEEEEEeCC---e---EEEcccccceEEEEEEeecc-c---c-chhhccCchH Q lcl|NC_019931. 76 LDKKEIESRNTI----------EKDTGELELLILSD---K---ISVTPFKNGELEVVYYTYEE-I---S-NILDTIKLPK 134 (195) Q Consensus 76 fN~kel~~r~s~----------ek~sgel~LlI~~D---k---lsvtPfk~G~LeVvy~~y~~-l---~-~~~~sl~lP~ 134 (195) -||+.+. +++. |..+|.-.-.|++| + +.=.|..+|.++.+|++-+. + . +-++.+++|. T Consensus 77 ~~g~a~~-~vsre~LD~~~P~W~~~~g~p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:82 77 SDGSAVR-PLSREVLDAQYPEWPTMKGIPECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCcee-eecHHHhcccCCCcCCCCCCceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 2566653 1222 33567766789988 3 44478889999999998752 1 1 2233579999 Q ss_pred HHHHHHHHHHHHHHhcCCCCc-chhHHHHHHHHHHHHH---HHHHHHHHHHhh-ccCcceEEE Q lcl|NC_019931. 135 ICLDVLVYSVLCNLLEIPNNE-TNFSVLANYKQLLKLA---KDNLTNYLNLMY-SKNIHFSKV 192 (195) Q Consensus 135 i~~naLvy~~L~~LLEiptnE-~N~~~ia~YkqL~k~a---kn~L~~YLn~~y-sk~~~fskv 192 (195) +-.++|+..+|+.-+-+|..+ .|.|+=+..-|.+..+ |-...+-.|.+= +.+.. -| T Consensus 156 ~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~--~~ 216 (216) T protein:vir:82 156 AYVNPLVEWMLFRAFSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG--GV 216 (216) T ss_pred hhhHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC--CC Confidence 999999999999999999885 8888888887777653 222222222221 22222 11 No 4 >protein:vir:5111 Length: 234 # NCBI annotation: unknown # Family: family:all:1423 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542268;genbank:gi:18071240;genbank:GeneID:929347 Probab=98.40 E-value=1.5e-08 Score=63.43 Aligned_cols=182 Identities=15% Similarity=0.101 Sum_probs=106.8 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc-ch------hhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT-IN------NLLGIES 73 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq-~~------nlLgi~~ 73 (195) |+-+.+||+++|..|+|. ..|+|+|.|++|-+|-|.-+.|+- |---.-+...+..+.-.-| .+ -.+.+.. T Consensus 1 m~t~~~lI~r~~~~l~D~--~~~rW~~~el~~~lNdAv~e~~l~-rp~a~~~~~~i~l~~Gt~q~lP~d~~~~~~l~li~ 77 (234) T protein:vir:51 1 MPKASEIMRLAGIQLLDE--DHIRWPLIELADWVNEGVKAIVLA-KPSASSKSAAIQLVKGTHQTLPGTIDGKATLQLIG 77 (234) T ss_pred CccHHHHHHHHHHHhccc--cccccChHHHHHHHHHHHHHHHhh-cCCCCccceeEeeccCCccccccccccchheehhh Confidence 999999999999999995 779999999999999999999965 3211222233332222211 11 1233333 Q ss_pred hhhCC----------cchh---------hhcccccCCCc-----EEEEEeCC----eEEE--cccccceEEEEEEeecc- Q lcl|NC_019931. 74 VKLDK----------KEIE---------SRNTIEKDTGE-----LELLILSD----KISV--TPFKNGELEVVYYTYEE- 122 (195) Q Consensus 74 a~fN~----------kel~---------~r~s~ek~sge-----l~LlI~~D----klsv--tPfk~G~LeVvy~~y~~- 122 (195) +.+|. +.+. +.-.=|..+|. ..=.|.++ ++.+ .|...|.++.+|++-.. T Consensus 78 i~rn~~s~~~~~~~grav~~vsre~LD~~~P~W~~~tg~P~~~~v~~y~~d~~~p~~~~l~P~p~~~g~v~~~~~r~P~~ 157 (234) T protein:vir:51 78 INRNLVSAAEPRQGLRAIRTCARDVLDAQEPNWHTASYVPFRKEVRQVIYDENLPTEFYVYPGNDGSGFVEAAFSFLPTS 157 (234) T ss_pred hhhhhccccccccCcceeeecCHHHhcccCCCccccCCCCchhhhhhhhccCCCCeEEEEeccCCCCceEEEEEEeecch Confidence 44322 1111 00001111221 11113333 1222 57779999999997764 Q ss_pred -----------ccchhhccCchHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHH---HHHHHHHHHhhccCcc Q lcl|NC_019931. 123 -----------ISNILDTIKLPKICLDVLVYSVLCNLLEIPNNETNFSVLANYKQLLKLAK---DNLTNYLNLMYSKNIH 188 (195) Q Consensus 123 -----------l~~~~~sl~lP~i~~naLvy~~L~~LLEiptnE~N~~~ia~YkqL~k~ak---n~L~~YLn~~ysk~~~ 188 (195) +.+-.+-+++|.+-.++|+..+|+--+-.-.+-.|.|+=+...|.+..+= ....+ +.+-. T Consensus 158 v~~~~~~d~~~~a~~~~~~~i~~~y~~~Lvdw~lyRa~skD~e~~d~~rA~~h~q~F~~~lG~k~~~d~------~~~pn 231 (234) T protein:vir:51 158 VKVANGADPEKIASWDIDVGLPEPYSVPLLDYVLYRCHQKDDTAADLGKATSHYQLFATAVGIKVQSEG------TSNPN 231 (234) T ss_pred hhhhhcCCccccccccccCCccchhhHHHHHHHhhhhcCccccccchHHHHHHHHHHHHHhCCcchhhh------hcccc Confidence 22223357899999999999999999997666677777777776665431 11110 11111 Q ss_pred eEE Q lcl|NC_019931. 189 FSK 191 (195) Q Consensus 189 fsk 191 (195) +.+ T Consensus 232 ~r~ 234 (234) T protein:vir:51 232 RRR 234 (234) T ss_pred ccC Confidence 112 No 5 >protein:vir:105573 Length: 225 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164310;genbank:gi:56692957;genbank:GeneID:3197184 Probab=97.91 E-value=8.4e-07 Score=53.90 Aligned_cols=189 Identities=15% Similarity=0.102 Sum_probs=114.4 Q ss_pred hhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhh---hhccccCccc--chh-hhhhhhhh Q lcl|NC_019931. 2 IGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRA---LITEEERFLT--INN-LLGIESVK 75 (195) Q Consensus 2 l~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~---~lt~e~~fiq--~~n-lLgi~~a~ 75 (195) |-+.+||+++|..|+|+--- |+|+|.|++|-||-|.-+.|..=||=|--.+. .+..+.--.| ++- +--|.-+- T Consensus 1 m~~~~lI~r~~~~l~D~~~~-~rW~~~el~~~lNdAv~e~~~r~rL~rpda~~~~~~i~l~~Gt~q~~~~~~~~~I~~~~ 79 (225) T protein:vir:10 1 MTLADLIRRVRTDANDMVEP-YFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLG 79 (225) T ss_pred CCHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHHHHHHhcccccccCCCceeeeeecCccccccCchHHHHHHHHh Confidence 99999999999999998322 89999999999999999999764442222222 2222222222 221 22244444 Q ss_pred hCCcc-------------h--hhhcccccCCCcEEEEEeCC-eEEEcccc--cceEEEEEEeeccccch----hh-ccCc Q lcl|NC_019931. 76 LDKKE-------------I--ESRNTIEKDTGELELLILSD-KISVTPFK--NGELEVVYYTYEEISNI----LD-TIKL 132 (195) Q Consensus 76 fN~ke-------------l--~~r~s~ek~sgel~LlI~~D-klsvtPfk--~G~LeVvy~~y~~l~~~----~~-sl~l 132 (195) +.+.. . .++-.=|..+|.-.-.++++ ++.|-|-- .|.++++|++-+-.... ++ -..+ T Consensus 80 ~~~~~~~~~~~~~~~s~e~LD~~~P~W~~~tg~p~~~~~d~~~~~l~P~p~~~~~vel~~~r~P~~~~~~~~~D~~~p~i 159 (225) T protein:vir:10 80 FYPADMSRPTMPVLKSAEVLDVELPEWRACTGKPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQPEI 159 (225) T ss_pred hcCcccCCceecccccHHHhcccCCCcccCCCCceEEEeCCcEEEEEecCCCceEEEEEEEeecchhhhccccccccCcc Confidence 42221 1 11111123356655667766 56665544 88899988887532222 22 3459 Q ss_pred hHHHHHHHHHHHHHHHhcCCC-CcchhHHHHHHHHHHHHHHH-HHHHHHHHhhccCcceEEEEeC Q lcl|NC_019931. 133 PKICLDVLVYSVLCNLLEIPN-NETNFSVLANYKQLLKLAKD-NLTNYLNLMYSKNIHFSKVVRV 195 (195) Q Consensus 133 P~i~~naLvy~~L~~LLEipt-nE~N~~~ia~YkqL~k~akn-~L~~YLn~~ysk~~~fskvvrv 195 (195) |.+-.++|+..+|+.-+-+|. +..|.|+=+..-|.+..|=. +..-=+++.=+++- ..++ T Consensus 160 ~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~alG~k~~ad~~r~~r~~~----p~~~ 220 (225) T protein:vir:10 160 HAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLRRITREDV----PHHV 220 (225) T ss_pred chhhHHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchhHHHHHhccccC----cccc Confidence 999999999999999999994 77888998888887765420 00001111112211 1122 No 6 >protein:vir:93692 Length: 197 # NCBI annotation: Bcep22gp58 # Family: family:all:1423 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944287;genbank:gi:38640364;genbank:GeneID:2658345 Probab=97.34 E-value=5.4e-06 Score=49.46 Aligned_cols=163 Identities=15% Similarity=0.113 Sum_probs=96.9 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc--chhhhhhhhhhhC- Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT--INNLLGIESVKLD- 77 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq--~~nlLgi~~a~fN- 77 (195) =|.+.++|+++|.-|.|. ..|||++.|++|-+|-|.-+.++. |=--+-+..++..+.---| +.-.+....|.+| T Consensus 2 ~~t~~~lI~r~~~~L~D~--~~~rW~~~el~dwlNdAv~ei~l~-rPda~~~~~~i~l~aGt~q~LP~~~~~Li~vvrn~ 78 (197) T protein:vir:93 2 PIAATDLIARAGNVLQDE--DHIRWEVPELIEWINDAARETIVR-RPAARSVAAVLELAAGTRQAIPERGVELLDVVRNM 78 (197) T ss_pred cccHHHHHHHHHHhhccc--cccccCcHHHHHHHHHHHHHHHhh-CCCCCcceeEEeeccCcccccchhHHHHHHHHHhh Confidence 247999999999999995 679999999999999999999876 3211122222222221111 1112222222322 Q ss_pred -------Ccchhhhccc----------c--cCCCcEEEEE---eCC-eEEEccc--ccceEEEEEEeecc-ccchhhccC Q lcl|NC_019931. 78 -------KKEIESRNTI----------E--KDTGELELLI---LSD-KISVTPF--KNGELEVVYYTYEE-ISNILDTIK 131 (195) Q Consensus 78 -------~kel~~r~s~----------e--k~sgel~LlI---~~D-klsvtPf--k~G~LeVvy~~y~~-l~~~~~sl~ 131 (195) |+.+ ..++. | ..+|+..=.+ +++ ++.|-|- ..|.++.+|+.-.+ +....+..+ T Consensus 79 ~~~~~~~gr~v-r~vsre~LD~~~P~W~~~~~~~~v~~y~~~e~~p~~~~vyP~p~~~~~ve~~~~r~P~~v~~~~~~~~ 157 (197) T protein:vir:93 79 GADGVTPGRIV-RRVDRQLLDDQNPDWHAARAKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPAIAASGDTLD 157 (197) T ss_pred hhcccCCCccc-ccccHHHhcccCCCCccCCCCCceEEEEeecCCCcEEEEeecCCCCceEEEEEeeCChhhhccCCCCC Confidence 3333 11111 1 3355532223 333 5666554 48999999988765 778889999 Q ss_pred chHHHHHHHH-HHHHHHHhcCCCCcchh---HHHHHHHHHHHHHHH Q lcl|NC_019931. 132 LPKICLDVLV-YSVLCNLLEIPNNETNF---SVLANYKQLLKLAKD 173 (195) Q Consensus 132 lP~i~~naLv-y~~L~~LLEiptnE~N~---~~ia~YkqL~k~akn 173 (195) +|.+-.++|| +.+|+--+..+.....= -.|.- ..+- T Consensus 158 ipeiy~~~lv~~~~lyRa~sKd~~~~a~a~~~~~~~------~~~~ 197 (197) T protein:vir:93 158 MGAEYMNVLVSTSATARCRRTASSRTARSPPCTIRR------SSTP 197 (197) T ss_pred CchhhhhhhHHhhhhhhhcCCCCCCcccCCcccccc------CCCC Confidence 9999999999 69998888775432210 00000 0000 No 7 >protein:vir:8841 Length: 208 # NCBI annotation: constituent protein # Family: family:all:6621 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775249;genbank:gi:27476047;genbank:GeneID:2700595 Probab=83.11 E-value=0.071 Score=26.87 Aligned_cols=182 Identities=13% Similarity=0.071 Sum_probs=107.5 Q ss_pred Ch---hHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccCccc-chhhhhhhhhhh Q lcl|NC_019931. 1 MI---GVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEERFLT-INNLLGIESVKL 76 (195) Q Consensus 1 Ml---~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~fiq-~~nlLgi~~a~f 76 (195) |= ...++.+.+-.=|+-+|.. ++-+=|-|+.|-..+....|.=..-++..++..+--+. +.+++.+.+++. T Consensus 1 ~~~i~~Y~~L~~~~~~~l~R~Dlt-----~~~~p~FI~lAE~~inr~Lr~~~~e~~vtl~~~~g~~~LP~Df~e~r~i~~ 75 (208) T protein:vir:88 1 MATINNVTDLAIAAIQWSDRQDLT-----QELLMLFIGNTTDRLNRLLRVRENEHFETLMAFGGGIEIPEHFVALRSITG 75 (208) T ss_pred CCCcCCHHHHHHHHHHhhccccch-----hhhhhHHHHHHHHHHHHHhcccccceEEEEEecCceeeCChhHHHHHHHhh Confidence 43 3456777776656554443 33477788888666655555422222223333222222 678898999887 Q ss_pred CC----cchhh---------hcccccCCCcEEEEEeCCeEEEcccccceE--EEEEEeeccccchhhccCc---hHHHHH Q lcl|NC_019931. 77 DK----KEIES---------RNTIEKDTGELELLILSDKISVTPFKNGEL--EVVYYTYEEISNILDTIKL---PKICLD 138 (195) Q Consensus 77 N~----kel~~---------r~s~ek~sgel~LlI~~DklsvtPfk~G~L--eVvy~~y~~l~~~~~sl~l---P~i~~n 138 (195) .+ -.+.. +...+.+.|-..-.+.||++.|-|..+|.. +++|+. .+..+.++-+. =.-+-| T Consensus 76 ~~~~~g~~l~~v~~~~~~~~~~~~~~~g~p~~yti~g~~i~~~P~p~~~~~~~i~Yy~--~iP~LS~~n~tNwLl~~aPD 153 (208) T protein:vir:88 76 DALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWT--VLPELSLDNPTTWALTKYPQ 153 (208) T ss_pred cCCCCCceecccCHHHhhhhhhhccCccccceEEEEcCeEEEeeecCCCceEEEEeee--ccCCCCCCCchhHHhhcchh Confidence 65 22211 111122223356889999999999987664 777665 44444444443 333456 Q ss_pred HHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HhhccCcceEEEEeC Q lcl|NC_019931. 139 VLVYSVLCNLLEIPNNETNFSVLANYKQLLKLAKDNLTNYLN-LMYSKNIHFSKVVRV 195 (195) Q Consensus 139 aLvy~~L~~LLEiptnE~N~~~ia~YkqL~k~akn~L~~YLn-~~ysk~~~fskvvrv 195 (195) +.+||+| .|+---+.+.++...++|++++|-..|..==+ .=||.... |+|= T Consensus 154 ~YLy~~L---~ea~~f~~D~~ra~~~~~~~~~al~~L~~~d~~~~~~~~~l---~i~~ 205 (208) T protein:vir:88 154 IYLYGVL---EQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRL---AIKD 205 (208) T ss_pred HHHHHHH---HHHHhcccCHhHHHHHHHHHHHHHHHHHhhhhhHHhcCCce---eeec Confidence 6777764 67788899999999999999999888764221 22333322 3333 No 8 >protein:vir:10130 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859260;genbank:gi:32171016;genbank:GeneID:2653415 Probab=69.81 E-value=0.22 Score=24.21 Aligned_cols=171 Identities=13% Similarity=0.112 Sum_probs=111.3 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccC----ccc---chhhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEER----FLT---INNLLGIES 73 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~----fiq---~~nlLgi~~ 73 (195) |..+.+.+-.||-= .. .=.+.-+-++|.+|+-+.|.|=.+=|. +.++....+ -+. -.++-.|+. T Consensus 37 Mv~~d~fLP~Vr~~-----vp--~~l~~~~~~aLr~AAieFCReS~~~R~--t~~~~~~~~~~~~~~~~~~~~~~~rI~~ 107 (223) T protein:vir:10 37 MAELSDFLPYVRRH-----IS--GPLNIMMTDALSMAAVAFSRQSLVCRR--EVTVVPVAGKEIVLPYDKDDEECVHIIR 107 (223) T ss_pred hccHHHHHHHHhhh-----CC--CchhHHHHHHHHHHHHHHHhhccceee--cccccCCCCcceEEeeccccccceeeEE Confidence 99999999999853 23 335788999999999999999876332 222211111 111 124557889 Q ss_pred hhhCCcchhhhcccccCCCcEEEEEeCCeEEEcccccceEEEEEEeeccccchhhccCchHHHH---HHHHHHHHHHHhc Q lcl|NC_019931. 74 VKLDKKEIESRNTIEKDTGELELLILSDKISVTPFKNGELEVVYYTYEEISNILDTIKLPKICL---DVLVYSVLCNLLE 150 (195) Q Consensus 74 a~fN~kel~~r~s~ek~sgel~LlI~~DklsvtPfk~G~LeVvy~~y~~l~~~~~sl~lP~i~~---naLvy~~L~~LLE 150 (195) |..||++|.. |.=--....|+|.++|-. |.++| +++=+|= .+.=.+|+... +|+-+|++-.||= T Consensus 108 v~~~g~~L~~--------G~~~t~~s~d~l~l~~~~-~tl~V-~~alkPs---~~a~~lPD~L~dy~eaI~~GA~arLlm 174 (223) T protein:vir:10 108 ISDDNHELFV--------GRDVDISSGRSLRFACSP-GEVSV-LYAVAPK---AGRSQIPDELLTWPEEVAAGALERLFM 174 (223) T ss_pred eecCCeeeec--------ccceeecCCceEEEEeCC-CeEEE-EEEeccC---cchhhhhHHHHHHHHHHHHHHHHHHHh Confidence 9999998864 221122344799999844 66654 5555663 23334555553 6899999999998 Q ss_pred CC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCcceEEEEeC Q lcl|NC_019931. 151 IP-NNETNFSVLANYKQLLKLAKDNLTNYLNLMY-SKNIHFSKVVRV 195 (195) Q Consensus 151 ip-tnE~N~~~ia~YkqL~k~akn~L~~YLn~~y-sk~~~fskvvrv 195 (195) .| ..=+|.|.=+.|.|.+-++=..= +=+++= +....||+=||= T Consensus 175 mP~kpWsNP~lA~y~~~~F~eg~r~A--kr~ale~~~~~~~~nP~R~ 219 (223) T protein:vir:10 175 QTGVSWSDPLRAQYFSVQFSEGIRRA--YRHTLATSPYSSYRNPVRR 219 (223) T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH--HHHHHhhcCccccCCCccc Confidence 88 66799999999999665442221 112222 345678888877 No 9 >protein:vir:9964 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859094;genbank:gi:32170849;genbank:GeneID:2653173 Probab=69.81 E-value=0.22 Score=24.21 Aligned_cols=171 Identities=13% Similarity=0.112 Sum_probs=111.3 Q ss_pred ChhHHHHHHHHHHhhccCccccceechHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccC----ccc---chhhhhhhh Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEILDSVLVENINQALLKICLEFKLNKAITRALITEEER----FLT---INNLLGIES 73 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fsD~ellD~iN~a~~~L~leFkLN~~~~~~~lt~e~~----fiq---~~nlLgi~~ 73 (195) |..+.+.+-.||-= .. .=.+.-+-++|.+|+-+.|.|=.+=|. +.++....+ -+. -.++-.|+. T Consensus 37 Mv~~d~fLP~Vr~~-----vp--~~l~~~~~~aLr~AAieFCReS~~~R~--t~~~~~~~~~~~~~~~~~~~~~~~rI~~ 107 (223) T protein:vir:99 37 MAELSDFLPYVRRH-----IS--GPLNIMMTDALSMAAVAFSRQSLVCRR--EVTVVPVAGKEIVLPYDKDDEECVHIIR 107 (223) T ss_pred hccHHHHHHHHhhh-----CC--CchhHHHHHHHHHHHHHHHhhccceee--cccccCCCCcceEEeeccccccceeeEE Confidence 99999999999853 23 335788999999999999999876332 222211111 111 124557889 Q ss_pred hhhCCcchhhhcccccCCCcEEEEEeCCeEEEcccccceEEEEEEeeccccchhhccCchHHHH---HHHHHHHHHHHhc Q lcl|NC_019931. 74 VKLDKKEIESRNTIEKDTGELELLILSDKISVTPFKNGELEVVYYTYEEISNILDTIKLPKICL---DVLVYSVLCNLLE 150 (195) Q Consensus 74 a~fN~kel~~r~s~ek~sgel~LlI~~DklsvtPfk~G~LeVvy~~y~~l~~~~~sl~lP~i~~---naLvy~~L~~LLE 150 (195) |..||++|.. |.=--....|+|.++|-. |.++| +++=+|= .+.=.+|+... +|+-+|++-.||= T Consensus 108 v~~~g~~L~~--------G~~~t~~s~d~l~l~~~~-~tl~V-~~alkPs---~~a~~lPD~L~dy~eaI~~GA~arLlm 174 (223) T protein:vir:99 108 ISDDNHELFV--------GRDVDISSGRSLRFACSP-GEVSV-LYAVAPK---AGRSQIPDELLTWPEEVAAGALERLFM 174 (223) T ss_pred eecCCeeeec--------ccceeecCCceEEEEeCC-CeEEE-EEEeccC---cchhhhhHHHHHHHHHHHHHHHHHHHh Confidence 9999998864 221122344799999844 66654 5555663 23334555553 6899999999998 Q ss_pred CC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCcceEEEEeC Q lcl|NC_019931. 151 IP-NNETNFSVLANYKQLLKLAKDNLTNYLNLMY-SKNIHFSKVVRV 195 (195) Q Consensus 151 ip-tnE~N~~~ia~YkqL~k~akn~L~~YLn~~y-sk~~~fskvvrv 195 (195) .| ..=+|.|.=+.|.|.+-++=..= +=+++= +....||+=||= T Consensus 175 mP~kpWsNP~lA~y~~~~F~eg~r~A--kr~ale~~~~~~~~nP~R~ 219 (223) T protein:vir:99 175 QTGVSWSDPLRAQYFSVQFSEGIRRA--YRHTLATSPYSSYRNPVRR 219 (223) T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH--HHHHHhhcCccccCCCccc Confidence 88 66799999999999665442221 112222 345678888877 No 10 >protein:vir:95880 Length: 236 # NCBI annotation: 30 kDa protein # Family: family:all:31944 # MgeID: mge:1586 # MgeName: N4 # Cross-refs: genbank:acc:YP_950545;genbank:gi:119952236;genbank:GeneID:5075707 Probab=29.31 E-value=1.7 Score=19.36 Aligned_cols=177 Identities=13% Similarity=0.144 Sum_probs=103.5 Q ss_pred ChhHHHHHHHHHHhhccCccccceec-----------hHHHHHHHHHHHHHHHHHHhhhh-----------hhhh----- Q lcl|NC_019931. 1 MIGVSKVIAKVRERLNDNQAGNYEIL-----------DSVLVENINQALLKICLEFKLNK-----------AITR----- 53 (195) Q Consensus 1 Ml~V~evi~~iR~RL~D~~~~n~~fs-----------D~ellD~iN~a~~~L~leFkLN~-----------~~~~----- 53 (195) |.-+-||+.+ |-|-..+|-..- -+-|+.++|+++++|--.|+|=- ..+. T Consensus 1 ~~~lkev~~~----La~gqL~N~~~V~~d~g~i~~~~~p~ii~a~N~gl~~Lh~Rf~lk~~~i~vem~eg~~~Y~L~~~y 76 (236) T protein:vir:95 1 MYYIEELFCR----LANGVLNNTGIVTDDRGDIEDDSKPFIIVAANEALTRLHGRFNMRNNNVVVEMQEGRTNYPLLAKY 76 (236) T ss_pred CchHHHHHHH----HhcceecceeeeecccccccccccchHHHHHhHHHHHHhhhhhhccCcEEEEEeeCceecccchhh Confidence 8777777664 444444444332 34689999999999999998811 0000 Q ss_pred --hhhc---cccCccc-------chhhhhhhhhh--------hCCcchhhhcccccCCCcEEEEEeCCeEEEc-ccccce Q lcl|NC_019931. 54 --ALIT---EEERFLT-------INNLLGIESVK--------LDKKEIESRNTIEKDTGELELLILSDKISVT-PFKNGE 112 (195) Q Consensus 54 --~~lt---~e~~fiq-------~~nlLgi~~a~--------fN~kel~~r~s~ek~sgel~LlI~~Dklsvt-Pfk~G~ 112 (195) |..+ .--|||. ..-++-|+||+ +|+..=-+..+.++++ .|-++ |-..-+ T Consensus 77 ~v~~~~p~~~~~~fI~d~~~~~~~~~ilri~~V~dd~G~~~~Lnd~~~~~sv~~P~~n----------vLqi~~~~~~~~ 146 (236) T protein:vir:95 77 AVQSYDPNEVKCPFIMDLAGEKFAEDVIRILEVYDDKGRRRPLNDRNNPCSLFTPRPN----------VLQNNAPKAWEV 146 (236) T ss_pred hhccCCCCCcccchhhccccchhHHHHHHHHhhccCCCcccccCCCCCCceeeeCCCc----------ceeeecCCCcce Confidence 0111 1124554 34567788888 3322223334444441 22222 333446 Q ss_pred EEEEEEeecccc----chhhccCchHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|NC_019931. 113 LEVVYYTYEEIS----NILDTIKLPKICLDVLVYSVLCNLLEIPNNETNFSVLANYKQLLKLAKDNLTNYLNLMYSKNIH 188 (195) Q Consensus 113 LeVvy~~y~~l~----~~~~sl~lP~i~~naLvy~~L~~LLEiptnE~N~~~ia~YkqL~k~akn~L~~YLn~~ysk~~~ 188 (195) |+|-|-.=.|.- |---.++||.-..+||.|.+-+.-.--=.-+.|--+=|+|-++|...=+++-.|= + .+.+ T Consensus 147 l~vkyq~~~~~l~~~eD~~~~idlP~t~~~aL~~yVA~r~~T~ig~~EnTAk~~~y~~~Yes~c~~v~~~~--l--~s~~ 222 (236) T protein:vir:95 147 LNVMYQAKHPKLSTAEDGYNEIDIPDTLDPALDAYIAYRYYTSLNTPESSAKAAEYLSFYDSICREVVEYD--L--TSDT 222 (236) T ss_pred EEEEeecCCCceeeeeCCcccccCCcchHHHHHHHHHHHhhccCCCcccchhhhhHHHHHHHHHhhHHhhc--c--cccc Confidence 888887655543 3334689999999999999987654322334455666799999999988877651 1 2222 Q ss_pred -eEEEEeC Q lcl|NC_019931. 189 -FSKVVRV 195 (195) Q Consensus 189 -fskvvrv 195 (195) ---++|+ T Consensus 223 ~v~~~~~f 230 (236) T protein:vir:95 223 EVDTNTLF 230 (236) T ss_pred cccccccc Confidence 2345566 Done!