Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : ENT47670 | Genbank acc : NC_019927

Category to which the Query Phage was assigned : Siphoviridae of Type1 (No Cluster Assigned)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 46

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	35	lcl\|NC_019927.1_cdsid_YP_007237609.1	HHsearch (proba=100.00%)
Portal	31	lcl\|NC_019927.1_cdsid_YP_007237605.1	HHsearch (proba=100.00%)
TermL	NOT FOUND
MTP	39	lcl\|NC_019927.1_cdsid_YP_007237613.1	Blast (e-value=7e-07)
Sheath	NOT FOUND
Ad1	36	lcl\|NC_019927.1_cdsid_YP_007237610.1	HHsearch (proba=100.00%)
Hc1	NOT FOUND
Ne1	37	lcl\|NC_019927.1_cdsid_YP_007237611.1	HHsearch (proba=100.00%)
Tc1	38	lcl\|NC_019927.1_cdsid_YP_007237612.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:105778 protein:vir:80068 protein:vir:107687	ES18 B054 T1	22 % 14 % 10 %
Portal	protein:vir:105782 protein:vir:79647 protein:vir:5249	ES18 TLS Aaphi23	32 % 17 % 16 %
MTP	protein:vir:105771 protein:vir:9881 protein:vir:79536	ES18 315.5 cdtI	24 % 17 % 19 %
Ad1	protein:vir:105776 protein:vir:107756 protein:vir:104344	ES18 BcepB1A RTP	40 % 12 % 21 %
Ne1	protein:vir:105773 protein:vir:96829 protein:vir:3617	ES18 EW TP901-1	30 % 22 % 20 %
Tc1	protein:vir:105772 protein:vir:96894 protein:vir:101303	ES18 EW phiNM3	22 % 10 % 9 %