Virfam_CNT_anal:NC_019544

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : D6E | Genbank acc : NC_019544

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 49

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	5	lcl\|NC_019544.1_cdsid_YP_007010926.1	HHsearch (proba=100.00%)
Portal	3	lcl\|NC_019544.1_cdsid_YP_007010924.1	HHsearch (proba=100.00%)
TermL	2	lcl\|NC_019544.1_cdsid_YP_007010923.1	Blast (e-value=1e-156)
MTP	NOT FOUND
Sheath	8	lcl\|NC_019544.1_cdsid_YP_007010929.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	7	lcl\|NC_019544.1_cdsid_YP_007010928.1	HHsearch (proba=100.00%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:102605 protein:vir:105822 protein:vir:7990	Llij PMC Che8	31 % 31 % 31 %
Portal	protein:vir:105889 protein:vir:94101 protein:vir:9871	phiETA3 96 315.5	39 % 39 % 29 %
TermL	protein:vir:106551 protein:vir:102941 protein:vir:4897	Lj965 EJ-1 Sfi11	59 % 58 % 25 %
Sheath	protein:vir:95263 protein:vir:80052 protein:vir:5260	Felix 01 B054 Aaphi23	24 % 23 % 19 %
Ne1	protein:vir:80037 protein:vir:5257 protein:vir:96105	B054 Aaphi23 F8	35 % 27 % 24 %