Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 5 lcl|NC_019544.1_cdsid_YP_007010926.1 HHsearch (proba=100.00%)
Portal 3 lcl|NC_019544.1_cdsid_YP_007010924.1 HHsearch (proba=100.00%)
TermL 2 lcl|NC_019544.1_cdsid_YP_007010923.1 Blast (e-value=1e-156)
MTP NOT FOUND
Sheath 8 lcl|NC_019544.1_cdsid_YP_007010929.1 HHsearch (proba=100.00%)
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 7 lcl|NC_019544.1_cdsid_YP_007010928.1 HHsearch (proba=100.00%)
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:102605
protein:vir:105822
protein:vir:7990
Llij
PMC
Che8
31 %
31 %
31 %
Portal protein:vir:105889
protein:vir:94101
protein:vir:9871
phiETA3
96
315.5
39 %
39 %
29 %
TermL protein:vir:106551
protein:vir:102941
protein:vir:4897
Lj965
EJ-1
Sfi11
59 %
58 %
25 %
Sheath protein:vir:95263
protein:vir:80052
protein:vir:5260
Felix 01
B054
Aaphi23
24 %
23 %
19 %
Ne1 protein:vir:80037
protein:vir:5257
protein:vir:96105
B054
Aaphi23
F8
35 %
27 %
24 %