Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 38 lcl|NC_015463.1_cdsid_YP_004421492.1 HHsearch (proba=100.00%)
Portal 89 lcl|NC_015463.1_cdsid_YP_004421543.1 HHsearch (proba=100.00%)
TermL 76 lcl|NC_015463.1_cdsid_YP_004421530.1 Blast (e-value=1e-75)
MTP NOT FOUND
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 14 lcl|NC_015463.1_cdsid_YP_004421468.1 HHsearch (proba=100.00%)
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 20 lcl|NC_015463.1_cdsid_YP_004421474.1 HHsearch (proba=96.79%)
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:97255
protein:vir:94933
protein:vir:95318
M6
Xp15
phiV10
28 %
25 %
24 %
Portal protein:vir:97265
protein:vir:95149
protein:vir:80453
M6
PA73
BcepGomr
23 %
21 %
19 %
TermL protein:vir:80106
protein:vir:5248
protein:vir:103223
B054
Aaphi23
JK06
35 %
33 %
31 %
Ne1 protein:vir:79091
protein:vir:107851
protein:vir:1988
phiE255
BcepMu
Mu
21 %
21 %
19 %
Hc2 protein:vir:103005Syn917 %