Virfam_CNT_anal:NC_011273

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : Myrna | Genbank acc : NC_011273

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 229

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	92	lcl\|NC_011273.1_cdsid_YP_002225010.1	HHsearch (proba=98.79%)
Portal	82	lcl\|NC_011273.1_cdsid_YP_002225000.1	HHsearch (proba=99.94%)
TermL	205	lcl\|NC_011273.1_cdsid_YP_002225123.1	Blast (e-value=0)
MTP	NOT FOUND
Sheath	115	lcl\|NC_011273.1_cdsid_YP_002225033.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	113	lcl\|NC_011273.1_cdsid_YP_002225031.1	HHsearch (proba=78.46%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:9820 protein:vir:3033 protein:vir:96833	315.4 PhiNIH1.1 EW	17 % 17 % 18 %
Portal	protein:vir:105154 protein:vir:95542 protein:vir:79538	C-St F10 cdtI	14 % 17 % 15 %
TermL	protein:vir:7745 protein:vir:107279 protein:vir:98727	Bxz1 Catera Ma-LMM01	55 % 51 % 20 %
Sheath	protein:vir:7653 protein:vir:107310 protein:vir:80779	Bxz1 Catera phiEF24C	72 % 71 % 20 %
Ne1	protein:vir:94654 protein:vir:102441 protein:vir:99101	mu1/6 Pipefish Qyrzula	21 % 19 % 18 %