Virfam_CNT_anal:NC_020842

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : phiST | Genbank acc : NC_020842

Category to which the Query Phage was assigned :

The queried phage could not be assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 104

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	79	lcl\|NC_020842.1_cdsid_YP_007673461.1	HHsearch (proba=99.74%)
Portal	80	lcl\|NC_020842.1_cdsid_YP_007673462.1	HHsearch (proba=100.00%)
TermL	20	lcl\|NC_020842.1_cdsid_YP_007673402.1	Blast (e-value=2e-19)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:99424 protein:vir:5739 protein:vir:485	BJ1 PY54 P27	11 % 16 % 16 %
Portal	protein:vir:96068 protein:vir:99563 protein:vir:79548	F8 BcepF1 cdtI	38 % 28 % 20 %
TermL	protein:vir:94525 protein:vir:78831 protein:vir:96370	phiJL-1 80alpha 53	26 % 24 % 24 %