Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 64 lcl|NC_018854.1_cdsid_YP_006908833.1 HHsearch (proba=100.00%)
Portal 67 lcl|NC_018854.1_cdsid_YP_006908836.1 HHsearch (proba=100.00%)
TermL 75 lcl|NC_018854.1_cdsid_YP_006908844.1 Blast (e-value=0)
MTP 21 lcl|NC_018854.1_cdsid_YP_006908790.1 Blast (e-value=0.0001)
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 74 lcl|NC_018854.1_cdsid_YP_006908843.1 HHsearch (proba=100.00%)
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:95875
protein:vir:105334
protein:vir:97433
N4
PH15
92
90 %
15 %
16 %
Portal protein:vir:95821
protein:vir:8846
protein:vir:94599
N4
PaP3
Pf-WMP4
71 %
16 %
15 %
TermL protein:vir:95873
protein:vir:103223
protein:vir:79222
N4
JK06
Phage MP22
86 %
19 %
18 %
MTP protein:vir:196
protein:vir:93600
protein:vir:105771
HK97
phi 4795
ES18
22 %
18 %
13 %
Ad3 protein:vir:95880
protein:vir:5111
protein:vir:3302
N4
PBC5
933W
53 %
17 %
17 %