Virfam_CNT_anal:NC

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : BTCU-1 | Genbank acc : NC_021533

Category to which the Query Phage was assigned : Siphoviridae of Type1 (Cluster 10) (Read more about that category)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 73

Classification of the Query Phage with respect to other related Phages in Aclame (Query Phage in text box with red border and white background):

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Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	14	lcl\|NC_021533.1_cdsid_YP_008126105.1	HHsearch (proba=100.00%)
Portal	10	lcl\|NC_021533.1_cdsid_YP_008126101.1	HHsearch (proba=100.00%)
TermL	9	lcl\|NC_021533.1_cdsid_YP_008126100.1	Blast (e-value=0)
MTP	19	lcl\|NC_021533.1_cdsid_YP_008126110.1	Blast (e-value=1e-84)
Sheath	NOT FOUND
Ad1	15	lcl\|NC_021533.1_cdsid_YP_008126106.1	HHsearch (proba=100.00%)
Hc1	16	lcl\|NC_021533.1_cdsid_YP_008126107.1	HHsearch (proba=100.00%)
Ne1	17	lcl\|NC_021533.1_cdsid_YP_008126108.1	HHsearch (proba=100.00%)
Tc1	18	lcl\|NC_021533.1_cdsid_YP_008126109.1	HHsearch (proba=100.00%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.

This page has some unexpected intergene distance(s) with respect to those observed in Reference Phages from Aclame (Obs_InterGeneDist > Mean_InterGeneDist+2*Std_Dev) (Help):

No unsual intergene distance were detected.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:7771 protein:vir:4226 protein:vir:2344	Bxz2 L5 Bxb1	83 % 57 % 56 %
Portal	protein:vir:7768 protein:vir:4223 protein:vir:2427	Bxz2 L5 D29	67 % 58 % 57 %
TermL	protein:vir:7767 protein:vir:4222 protein:vir:2340	Bxz2 L5 Bxb1	72 % 68 % 68 %
MTP	protein:vir:7778 protein:vir:2437 protein:vir:4232	Bxz2 D29 L5	77 % 66 % 64 %
Ad1	protein:vir:7773 protein:vir:2432 protein:vir:104088	Bxz2 D29 Che12	62 % 53 % 51 %
Hc1	protein:vir:7775 protein:vir:104090 protein:vir:4229	Bxz2 Che12 L5	67 % 58 % 58 %
Ne1	protein:vir:7776 protein:vir:78503 protein:vir:78298	Bxz2 U2 Bethlehem	65 % 52 % 52 %
Tc1	protein:vir:7777 protein:vir:4231 protein:vir:2436	Bxz2 L5 D29	73 % 64 % 64 %