Virfam_CNT_anal:NC_020880

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : P793 | Genbank acc : NC_020880

Category to which the Query Phage was assigned :

The queried phage could not be assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 38

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	11	lcl\|NC_020880.1_cdsid_YP_007677971.1	HHsearch (proba=100.00%)
Portal	10	lcl\|NC_020880.1_cdsid_YP_007677970.1	HHsearch (proba=100.00%)
TermL	9	lcl\|NC_020880.1_cdsid_YP_007677969.1	Blast (e-value=4e-45)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	14	lcl\|NC_020880.1_cdsid_YP_007677974.1	HHsearch (proba=70.72%)
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:93616 protein:vir:96762 protein:vir:4074	phi 4795 VP882 c2	21 % 20 % 18 %
Portal	protein:vir:98643 protein:vir:9641 protein:vir:94002	phi3396 315.1 jj50	19 % 19 % 17 %
TermL	protein:vir:2682 protein:vir:9358 protein:vir:78630	phiSLT phi 12 tp310-2	25 % 25 % 24 %
Hc1	protein:vir:395	N15	18 %