Virfam_CNT_anal:NC_019928

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : KHP30 | Genbank acc : NC_019928

Category to which the Query Phage was assigned :

The queried phage was recognized as a Podoviridae of Type3 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 30

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	14	lcl\|NC_019928.1_cdsid_YP_007237634.1	HHsearch (proba=100.00%)
Portal	17	lcl\|NC_019928.1_cdsid_YP_007237637.1	HHsearch (proba=100.00%)
TermL	18	lcl\|NC_019928.1_cdsid_YP_007237638.1	Blast (e-value=5e-24)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	12	lcl\|NC_019928.1_cdsid_YP_007237632.1	HHsearch (proba=98.50%)
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:93696 protein:vir:104439 protein:vir:10123	Bcep22 86 Stx2 converting bacteriophage II	18 % 16 % 16 %
Portal	protein:vir:93630 protein:vir:10117 protein:vir:9950	Bcep22 Stx2 converting bacteriophage II Stx1 converting bacteriophage	19 % 18 % 18 %
TermL	protein:vir:104336 protein:vir:3963 protein:vir:3608	RTP ul36 TP901-1	23 % 23 % 23 %
Ad3	protein:vir:3302 protein:vir:2779 protein:vir:823	933W Stx2 converting bacteriophage I VT2-Sa	18 % 18 % 18 %