Virfam_CNT_anal:NC_015157

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : ICP1 | Genbank acc : NC_015157

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

Click on the image to download it as png (download in pdf or svg format)

ERROR_IN_GENERATING_GENECONTEXT_FIGURE. Contact Webmaster.

Number of sequences analyzed : 230

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	123	lcl\|NC_015157.1_cdsid_YP_004251064.1	HHsearch (proba=100.00%)
Portal	128	lcl\|NC_015157.1_cdsid_YP_004251069.1	HHsearch (proba=100.00%)
TermL	129	lcl\|NC_015157.1_cdsid_YP_004251070.1	Blast (e-value=6e-62)
MTP	NOT FOUND
Sheath	84	lcl\|NC_015157.1_cdsid_YP_004251025.1	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	87	lcl\|NC_015157.1_cdsid_YP_004251028.1	HHsearch (proba=100.00%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:10324 protein:vir:95258 protein:vir:96490	VHML Felix 01 2972	19 % 18 % 13 %
Portal	protein:vir:95254 protein:vir:77981 protein:vir:79511	Felix 01 P23-45 P74-26	19 % 16 % 16 %
TermL	protein:vir:95253 protein:vir:94970 protein:vir:105897	Felix 01 Xp15 phiETA3	33 % 20 % 18 %
Sheath	protein:vir:95263 protein:vir:5260 protein:vir:80052	Felix 01 Aaphi23 B054	23 % 19 % 17 %
Ne1	protein:vir:95260 protein:vir:99546 protein:vir:5257	Felix 01 BcepF1 Aaphi23	24 % 22 % 21 %