Virfam_CNT_anal:NC_012530

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : Lb338-1 | Genbank acc : NC_012530

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 199

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	109	lcl\|NC_012530.1_cdsid_YP_002790788.1	HHsearch (proba=100.00%)
Portal	106	lcl\|NC_012530.1_cdsid_YP_002790785.1	HHsearch (proba=100.00%)
TermL	91	lcl\|NC_012530.1_cdsid_YP_002790770.1	Blast (e-value=1e-71)
MTP	116	lcl\|NC_012530.1_cdsid_YP_002790795.1	Blast (e-value=8e-32)
Sheath	115	lcl\|NC_012530.1_cdsid_YP_002790794.1	HHsearch (proba=100.00%)
Ad1	111	lcl\|NC_012530.1_cdsid_YP_002790790.1	HHsearch (proba=98.21%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:80491 protein:vir:63741 protein:vir:96666	A511 P100 Twort	37 % 37 % 37 %
Portal	protein:vir:80644 protein:vir:63755 protein:vir:80796	A511 P100 phiEF24C	46 % 45 % 43 %
TermL	protein:vir:80755 protein:vir:80633 protein:vir:63747	phiEF24C A511 P100	53 % 51 % 51 %
MTP	protein:vir:80710 protein:vir:63764 protein:vir:80620	phiEF24C P100 A511	46 % 46 % 44 %
Sheath	protein:vir:80779 protein:vir:99306 protein:vir:95741	phiEF24C K G1	39 % 39 % 39 %
Ad1	protein:vir:80320 protein:vir:1435 protein:vir:8104	phi644-2 phiE125 Che9c	16 % 15 % 11 %