Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 11 lcl|Aclame:protein:vir:96666|NCBI_annot:ORF016|genbank:acc:YP_238545;genbank:gi:66391271;genbank:Gen HHsearch (proba=100.00%)
Portal 8 lcl|Aclame:protein:vir:96579|NCBI_annot:ORF012|genbank:acc:YP_238542;genbank:gi:66391267;genbank:Gen HHsearch (proba=100.00%)
TermL 2 lcl|Aclame:protein:vir:96515|NCBI_annot:ORF036|genbank:acc:YP_238536;genbank:gi:66391291;genbank:Gen Blast (e-value=1e-123)
MTP 21 lcl|Aclame:protein:vir:96672|NCBI_annot:ORF106|genbank:acc:YP_238555;genbank:gi:66391358;genbank:Gen Blast (e-value=8e-69)
Sheath 19 lcl|Aclame:protein:vir:96586|NCBI_annot:ORF011|genbank:acc:YP_238553;genbank:gi:66391266;genbank:Gen HHsearch (proba=100.00%)
Ad1 14 lcl|Aclame:protein:vir:96671|NCBI_annot:ORF032|genbank:acc:YP_238548;genbank:gi:66391287;genbank:Gen HHsearch (proba=98.21%)
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.





Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:96666
protein:vir:99311
protein:vir:95603
Twort
K
G1
100 %
82 %
82 %
Portal protein:vir:96579
protein:vir:99312
protein:vir:95599
Twort
K
G1
100 %
78 %
78 %
TermL protein:vir:99333
protein:vir:95547
protein:vir:80633
K
G1
A511
72 %
72 %
53 %
MTP protein:vir:96672
protein:vir:99300
protein:vir:95739
Twort
K
G1
100 %
84 %
84 %
Sheath protein:vir:96586
protein:vir:99306
protein:vir:95741
Twort
K
G1
100 %
75 %
75 %
Ad1 protein:vir:80320
protein:vir:1435
protein:vir:8104
phi644-2
phiE125
Che9c
15 %
15 %
13 %