Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : G1 | Genbank acc : NC_007066 | Aclame index mge :1577

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 214

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	12	lcl\|Aclame:protein:vir:95603\|NCBI_annot:ORF016\|genbank:acc:YP_240903;genbank:gi:66394965;genbank:Gen	HHsearch (proba=100.00%)
Portal	9	lcl\|Aclame:protein:vir:95599\|NCBI_annot:ORF014\|genbank:acc:YP_240900;genbank:gi:66394963;genbank:Gen	HHsearch (proba=100.00%)
TermL	1	lcl\|Aclame:protein:vir:95547\|NCBI_annot:ORF010\|genbank:acc:YP_240892;genbank:gi:66394959;genbank:Gen	Blast (e-value=0)
MTP	20	lcl\|Aclame:protein:vir:95739\|NCBI_annot:ORF105\|genbank:acc:YP_240911;genbank:gi:66395051;genbank:Gen	Blast (e-value=5e-82)
Sheath	19	lcl\|Aclame:protein:vir:95741\|NCBI_annot:ORF011\|genbank:acc:YP_240910;genbank:gi:66394960;genbank:Gen	HHsearch (proba=100.00%)
Ad1	14	lcl\|Aclame:protein:vir:95760\|NCBI_annot:ORF030\|genbank:acc:YP_240905;genbank:gi:66394979;genbank:Gen	HHsearch (proba=98.23%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:99311 protein:vir:95603 protein:vir:96666	K G1 Twort	100 % 100 % 82 %
Portal	protein:vir:99312 protein:vir:95599 protein:vir:96579	K G1 Twort	100 % 100 % 77 %
TermL	protein:vir:99333 protein:vir:95547 protein:vir:80755	K G1 phiEF24C	100 % 100 % 56 %
MTP	protein:vir:99300 protein:vir:95739 protein:vir:96672	K G1 Twort	100 % 100 % 84 %
Sheath	protein:vir:99306 protein:vir:95741 protein:vir:96586	K G1 Twort	100 % 100 % 75 %
Ad1	protein:vir:80320 protein:vir:1435 protein:vir:8104	phi644-2 phiE125 Che9c	13 % 15 % 10 %