Virfam_CNT_anal:NC_011421

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : SPO1 | Genbank acc : NC_011421

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 204

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	73	lcl\|NC_011421.1_cdsid_YP_002300349.1	HHsearch (proba=100.00%)
Portal	70	lcl\|NC_011421.1_cdsid_YP_002300346.1	HHsearch (proba=100.00%)
TermL	54	lcl\|NC_011421.1_cdsid_YP_002300330.1	Blast (e-value=5e-99)
MTP	81	lcl\|NC_011421.1_cdsid_YP_002300357.1	Blast (e-value=4e-32)
Sheath	80	lcl\|NC_011421.1_cdsid_YP_002300356.1	HHsearch (proba=100.00%)
Ad1	75	lcl\|NC_011421.1_cdsid_YP_002300351.1	HHsearch (proba=99.31%)
Hc1	48	lcl\|NC_011421.1_cdsid_YP_002300324.1	HHsearch (proba=72.71%)
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:99311 protein:vir:95603 protein:vir:96666	K G1 Twort	29 % 29 % 28 %
Portal	protein:vir:63755 protein:vir:80796 protein:vir:80644	P100 phiEF24C A511	38 % 37 % 37 %
TermL	protein:vir:99333 protein:vir:95547 protein:vir:80755	K G1 phiEF24C	34 % 34 % 32 %
MTP	protein:vir:80620 protein:vir:99300 protein:vir:95739	A511 K G1	45 % 45 % 45 %
Sheath	protein:vir:80488 protein:vir:63742 protein:vir:80779	A511 P100 phiEF24C	30 % 30 % 28 %
Ad1	protein:vir:80320 protein:vir:101652 protein:vir:7857	phi644-2 244 CJW1	11 % 17 % 17 %
Hc1	protein:vir:102607 protein:vir:105824 protein:vir:7992	Llij PMC Che8	24 % 24 % 24 %