Virfam_CNT_anal:NC_020865

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : KBS-P-1A | Genbank acc : NC_020865

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 57

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	55	lcl\|NC_020865.1_cdsid_YP_007676377.1	HHsearch (proba=100.00%)
Portal	48	lcl\|NC_020865.1_cdsid_YP_007676370.1	HHsearch (proba=100.00%)
TermL	21	lcl\|NC_020865.1_cdsid_YP_007676343.1	Blast (e-value=0)
MTP	NOT FOUND
Sheath	12	lcl\|NC_020865.1_cdsid_YP_007676334.1	HHsearch (proba=97.84%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	56	lcl\|NC_020865.1_cdsid_YP_007676378.1	HHsearch (proba=100.00%)
Hc3	1	lcl\|NC_020865.1_cdsid_YP_007676323.1	HHsearch (proba=100.00%)
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:100057 protein:vir:78739 protein:vir:1781	P-SSP7 Syn5 P60	69 % 41 % 36 %
Portal	protein:vir:100039 protein:vir:1785 protein:vir:78696	P-SSP7 P60 Syn5	69 % 53 % 52 %
TermL	protein:vir:100065 protein:vir:78718 protein:vir:10462	P-SSP7 Syn5 phiA1122	84 % 60 % 44 %
Sheath	protein:vir:4517 protein:vir:489 protein:vir:1996	V P27 Mu	22 % 22 % 19 %
Ad3	protein:vir:100027 protein:vir:78741 protein:vir:1780	P-SSP7 Syn5 P60	47 % 42 % 37 %
Hc3	protein:vir:100022 protein:vir:78703 protein:vir:1778	P-SSP7 Syn5 P60	31 % 28 % 26 %