Virfam_CNT_anal:NC_018860

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : BCP78 | Genbank acc : NC_018860

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 227

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	221	lcl\|NC_018860.1_cdsid_YP_006908056.1	HHsearch (proba=100.00%)
Portal	225	lcl\|NC_018860.1_cdsid_YP_006908060.1	HHsearch (proba=100.00%)
TermL	12	lcl\|NC_018860.1_cdsid_YP_006907847.1	Blast (e-value=0)
MTP	213	lcl\|NC_018860.1_cdsid_YP_006908048.1	Blast (e-value=5e-58)
Sheath	214	lcl\|NC_018860.1_cdsid_YP_006908049.1	HHsearch (proba=100.00%)
Ad1	219	lcl\|NC_018860.1_cdsid_YP_006908054.1	HHsearch (proba=97.72%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	158	lcl\|NC_018860.1_cdsid_YP_006907993.1	HHsearch (proba=72.15%)
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:63741 protein:vir:80491 protein:vir:80835	P100 A511 phiEF24C	59 % 59 % 57 %
Portal	protein:vir:80644 protein:vir:63755 protein:vir:80796	A511 P100 phiEF24C	53 % 53 % 51 %
TermL	protein:vir:80755 protein:vir:99333 protein:vir:95547	phiEF24C K G1	54 % 49 % 49 %
MTP	protein:vir:80620 protein:vir:80710 protein:vir:63764	A511 phiEF24C P100	69 % 68 % 66 %
Sheath	protein:vir:80779 protein:vir:80488 protein:vir:63742	phiEF24C A511 P100	47 % 47 % 47 %
Ad1	protein:vir:80320 protein:vir:1435 protein:vir:101652	phi644-2 phiE125 244	15 % 15 % 18 %
Tc1	protein:vir:1580	phig1e	15 %