Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 8 lcl|Aclame:protein:vir:4856|NCBI_annot:major HHsearch (proba=100.00%)
Portal 6 lcl|Aclame:protein:vir:4854|NCBI_annot:putative HHsearch (proba=100.00%)
TermL 4 lcl|Aclame:protein:vir:4852|NCBI_annot:putative Blast (e-value=0)
MTP 13 lcl|Aclame:protein:vir:4861|NCBI_annot:major Blast (e-value=1e-117)
Sheath NOT FOUND
Ad1 9 lcl|Aclame:protein:vir:4857|NCBI_annot:putative HHsearch (proba=100.00%)
Hc1 10 lcl|Aclame:protein:vir:4858|NCBI_annot:putative HHsearch (proba=100.00%)
Ne1 11 lcl|Aclame:protein:vir:4859|NCBI_annot:putative HHsearch (proba=100.00%)
Tc1 12 lcl|Aclame:protein:vir:4860|NCBI_annot:putative HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:4856
protein:vir:4953
protein:vir:4830
DT1
Sfi19
7201
100 %
93 %
90 %
Portal protein:vir:4854
protein:vir:4828
protein:vir:4995
DT1
7201
Sfi21
100 %
89 %
87 %
TermL protein:vir:4852
protein:vir:4950
protein:vir:4993
DT1
Sfi19
Sfi21
100 %
94 %
92 %
MTP protein:vir:4861
protein:vir:4835
protein:vir:4957
DT1
7201
Sfi19
100 %
93 %
92 %
Ad1 protein:vir:4857
protein:vir:4954
protein:vir:4831
DT1
Sfi19
7201
100 %
91 %
82 %
Hc1 protein:vir:4858
protein:vir:4955
protein:vir:4832
DT1
Sfi19
7201
100 %
92 %
91 %
Ne1 protein:vir:4859
protein:vir:4833
protein:vir:4956
DT1
7201
Sfi19
100 %
93 %
91 %
Tc1 protein:vir:4860
protein:vir:4834
protein:vir:5001
DT1
7201
Sfi21
100 %
94 %
86 %