Virfam_CNT_anal:NC_020871

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : vB_LmoM_AG20 | Genbank acc : NC_020871

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 178

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	77	lcl\|NC_020871.1_cdsid_YP_007676745.1	HHsearch (proba=100.00%)
Portal	74	lcl\|NC_020871.1_cdsid_YP_007676742.1	HHsearch (proba=100.00%)
TermL	65	lcl\|NC_020871.1_cdsid_YP_007676733.1	Blast (e-value=0)
MTP	85	lcl\|NC_020871.1_cdsid_YP_007676753.1	Blast (e-value=1e-79)
Sheath	84	lcl\|NC_020871.1_cdsid_YP_007676752.1	HHsearch (proba=100.00%)
Ad1	79	lcl\|NC_020871.1_cdsid_YP_007676747.1	HHsearch (proba=97.91%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:80491 protein:vir:63741 protein:vir:80835	A511 P100 phiEF24C	100 % 100 % 72 %
Portal	protein:vir:80644 protein:vir:63755 protein:vir:80796	A511 P100 phiEF24C	99 % 99 % 63 %
TermL	protein:vir:80633 protein:vir:63747 protein:vir:80755	A511 P100 phiEF24C	100 % 100 % 60 %
MTP	protein:vir:80620 protein:vir:63764 protein:vir:80710	A511 P100 phiEF24C	100 % 100 % 75 %
Sheath	protein:vir:80488 protein:vir:63742 protein:vir:80779	A511 P100 phiEF24C	99 % 99 % 65 %
Ad1	protein:vir:80320 protein:vir:1435 protein:vir:8104	phi644-2 phiE125 Che9c	16 % 16 % 11 %