Virfam_CNT_anal:NC_012663

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : P087 | Genbank acc : NC_012663

Category to which the Query Phage was assigned :

The queried phage could not be assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 88

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	62	lcl\|NC_012663.1_cdsid_YP_002875730.1	HHsearch (proba=100.00%)
Portal	57	lcl\|NC_012663.1_cdsid_YP_002875725.1	HHsearch (proba=98.89%)
TermL	NOT FOUND
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	64	lcl\|NC_012663.1_cdsid_YP_002875732.1	HHsearch (proba=78.87%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:79548 protein:vir:95512	cdtI F10	17 % 15 %
Portal	protein:vir:104259 protein:vir:6210 protein:vir:97060	T5 phBC6A52 OP1	16 % 18 % 15 %