Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : phiE12-2 | Genbank acc : NC_009236 | Aclame index mge :1848

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae of Type1 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 50

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	2	lcl\|Aclame:protein:vir:78186\|NCBI_annot:gp2,	HHsearch (proba=100.00%)
Portal	5	lcl\|Aclame:protein:vir:78191\|NCBI_annot:gp5,	HHsearch (proba=100.00%)
TermL	4	lcl\|Aclame:protein:vir:78195\|NCBI_annot:gp4,	Blast (e-value=0)
MTP	32	lcl\|Aclame:protein:vir:78189\|NCBI_annot:gp32,	Blast (e-value=2e-98)
Sheath	33	lcl\|Aclame:protein:vir:78206\|NCBI_annot:gp33,	HHsearch (proba=100.00%)
Ad1	50	lcl\|Aclame:protein:vir:78179\|NCBI_annot:gp50,	HHsearch (proba=100.00%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:78186 protein:vir:104011 protein:vir:79171	phiE12-2 phi52237 phiE202	100 % 100 % 99 %
Portal	protein:vir:78191 protein:vir:79207 protein:vir:103971	phiE12-2 phiE202 phi52237	100 % 99 % 99 %
TermL	protein:vir:78195 protein:vir:103970 protein:vir:79177	phiE12-2 phi52237 phiE202	100 % 100 % 99 %
MTP	protein:vir:79203 protein:vir:78189 protein:vir:103992	phiE202 phiE12-2 phi52237	100 % 100 % 100 %
Sheath	protein:vir:78206 protein:vir:103993 protein:vir:79181	phiE12-2 phi52237 phiE202	100 % 100 % 99 %
Ad1	protein:vir:79188 protein:vir:79124 protein:vir:1155	phiE202 RSA1 phi CTX	99 % 55 % 46 %