Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : phiEL | Genbank acc : NC_007623 | Aclame index mge :1500

Category to which the Query Phage was assigned :

The queried phage was recognized as a Myoviridae
but could not be further assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

Click on the image to download it as png (download in pdf or svg format)

ERROR_IN_GENERATING_GENECONTEXT_FIGURE. Contact Webmaster.

Number of sequences analyzed : 201

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	NOT FOUND
Portal	198	lcl\|Aclame:protein:vir:94230\|NCBI_annot:hypothetical	HHsearch (proba=97.04%)
TermL	11	lcl\|Aclame:protein:vir:94185\|NCBI_annot:putative	Blast (e-value=0)
MTP	NOT FOUND
Sheath	6	lcl\|Aclame:protein:vir:94259\|NCBI_annot:hypothetical	HHsearch (proba=100.00%)
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
Portal	protein:vir:101541 protein:vir:3648 protein:vir:78589	Bcep43 Bcep781 BcepNY3	19 % 19 % 19 %
TermL	protein:vir:94185 protein:vir:8929 protein:vir:106989	phiEL phiKZ S-PM2	100 % 30 % 16 %
Sheath	protein:vir:94259 protein:vir:8933	phiEL phiKZ	100 % 25 %