Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 5 lcl|Aclame:protein:vir:107593|NCBI_annot:major HHsearch (proba=100.00%)
Portal 3 lcl|Aclame:protein:vir:107605|NCBI_annot:phage HHsearch (proba=100.00%)
TermL 2 lcl|Aclame:protein:vir:107576|NCBI_annot:phage Blast (e-value=0)
MTP 10 lcl|Aclame:protein:vir:107619|NCBI_annot:major Blast (e-value=1e-115)
Sheath NOT FOUND
Ad1 6 lcl|Aclame:protein:vir:107614|NCBI_annot:conserved HHsearch (proba=100.00%)
Hc1 7 lcl|Aclame:protein:vir:107606|NCBI_annot:head-tail HHsearch (proba=100.00%)
Ne1 8 lcl|Aclame:protein:vir:107568|NCBI_annot:conserved HHsearch (proba=100.00%)
Tc1 9 lcl|Aclame:protein:vir:107581|NCBI_annot:conserved HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:102082
protein:vir:102873
protein:vir:107593
Fah
Cherry
Gamma
100 %
100 %
100 %
Portal protein:vir:102855
protein:vir:107605
protein:vir:105002
Cherry
Gamma
W Beta
100 %
100 %
100 %
TermL protein:vir:102079
protein:vir:102883
protein:vir:107576
Fah
Cherry
Gamma
100 %
100 %
100 %
MTP protein:vir:102037
protein:vir:102845
protein:vir:107619
Fah
Cherry
Gamma
100 %
100 %
100 %
Ad1 protein:vir:102083
protein:vir:102863
protein:vir:107614
Fah
Cherry
Gamma
100 %
100 %
100 %
Hc1 protein:vir:102084
protein:vir:102856
protein:vir:107606
Fah
Cherry
Gamma
100 %
100 %
100 %
Ne1 protein:vir:102085
protein:vir:102875
protein:vir:107568
Fah
Cherry
Gamma
100 %
100 %
100 %
Tc1 protein:vir:102086
protein:vir:102888
protein:vir:107581
Fah
Cherry
Gamma
100 %
100 %
100 %