Query lcl|Aclame:protein:vir:107605|NCBI_annot:phage portal protein, HK97 family|genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Match_columns 432 No_of_seqs 130 out of 1111 Neff 10.1 Searched_HMMs 1612 Date Mon Dec 2 04:30:03 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_38 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_38_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:102855 Length: 432 100.0 2E-112 1E-115 633.5 47.9 432 1-432 1-432 (432) 2 protein:vir:107605 Length: 432 100.0 2E-112 1E-115 633.5 47.9 432 1-432 1-432 (432) 3 protein:vir:105002 Length: 432 100.0 2E-112 1E-115 633.5 47.9 432 1-432 1-432 (432) 4 protein:vir:102080 Length: 429 100.0 5E-110 3E-113 619.8 47.1 429 1-432 1-429 (429) 5 protein:vir:81152 Length: 411 100.0 2E-103 1E-106 584.1 44.9 409 1-420 1-411 (411) 6 protein:vir:1380 Length: 422 # 100.0 2E-101 1E-104 572.3 44.0 418 1-423 1-422 (422) 7 protein:vir:102118 Length: 409 100.0 1E-99 6E-103 563.3 44.8 408 1-420 1-409 (409) 8 protein:vir:4509 Length: 424 # 100.0 6.7E-99 4E-102 558.8 44.8 408 1-432 16-424 (424) 9 protein:vir:4454 Length: 414 # 100.0 1.7E-98 1E-101 556.6 44.9 411 1-430 1-414 (414) 10 protein:vir:6240 Length: 457 # 100.0 2.9E-98 2E-101 555.3 44.9 429 1-432 1-445 (457) 11 protein:vir:1326 Length: 457 # 100.0 3.1E-98 2E-101 555.2 45.0 429 1-432 1-445 (457) 12 protein:vir:100249 Length: 431 100.0 1E-97 6E-101 552.3 43.6 408 1-428 1-431 (431) 13 protein:vir:1884 Length: 424 # 100.0 3.9E-97 2E-100 549.1 44.5 406 1-421 14-424 (424) 14 protein:vir:97060 Length: 432 100.0 4.2E-97 3E-100 549.0 44.0 419 1-432 7-431 (432) 15 protein:vir:10362 Length: 432 100.0 5.9E-97 4E-100 548.1 43.9 419 1-432 7-431 (432) 16 protein:vir:105064 Length: 421 100.0 9.2E-97 6E-100 547.1 44.1 409 1-432 1-416 (421) 17 protein:vir:81072 Length: 432 100.0 1.1E-96 7E-100 546.6 43.9 419 1-432 7-431 (432) 18 protein:vir:1266 Length: 416 # 100.0 1.7E-96 1.1E-99 545.6 44.6 414 2-431 1-416 (416) 19 protein:vir:189 Length: 424 # 100.0 1.4E-96 8E-100 546.2 44.0 406 1-429 14-424 (424) 20 protein:vir:93610 Length: 454 100.0 1.8E-96 1.1E-99 545.5 42.8 422 3-432 1-433 (454) 21 protein:vir:483 Length: 413 # 100.0 5.2E-96 3.2E-99 543.0 44.4 410 1-428 1-413 (413) 22 protein:vir:4337 Length: 434 # 100.0 2E-95 1.3E-98 539.7 43.9 417 3-428 1-434 (434) 23 protein:vir:100150 Length: 437 100.0 2.8E-95 1.7E-98 539.0 44.6 419 1-432 1-430 (437) 24 protein:vir:5737 Length: 419 # 100.0 4.5E-95 2.8E-98 537.8 42.6 413 1-432 1-419 (419) 25 protein:vir:1431 Length: 419 # 100.0 8.4E-95 5.2E-98 536.3 43.4 408 2-432 1-415 (419) 26 protein:vir:96980 Length: 409 100.0 1.8E-93 1.1E-96 529.1 43.4 404 1-425 4-409 (409) 27 protein:vir:80333 Length: 419 100.0 8.6E-94 5.4E-97 530.8 41.4 409 1-432 1-415 (419) 28 protein:vir:2683 Length: 412 # 100.0 1.4E-93 8.7E-97 529.6 41.4 407 1-425 1-412 (412) 29 protein:vir:8418 Length: 409 # 100.0 3.3E-93 2.1E-96 527.6 43.0 405 1-432 1-408 (409) 30 protein:vir:7853 Length: 518 # 100.0 2E-92 1.2E-95 523.3 42.9 416 1-432 1-433 (518) 31 protein:vir:93943 Length: 409 100.0 2.9E-92 1.8E-95 522.5 43.7 404 1-425 4-409 (409) 32 protein:vir:101648 Length: 518 100.0 2.9E-92 1.8E-95 522.4 43.1 417 1-432 1-433 (518) 33 protein:vir:94426 Length: 409 100.0 3.5E-92 2.2E-95 522.0 43.4 404 1-425 4-409 (409) 34 protein:vir:81218 Length: 423 100.0 2.3E-91 1.4E-94 517.5 42.4 409 1-423 1-423 (423) 35 protein:vir:79984 Length: 441 100.0 4.1E-91 2.5E-94 516.1 43.3 416 1-432 11-440 (441) 36 protein:vir:9408 Length: 441 # 100.0 4.1E-91 2.5E-94 516.1 43.3 416 1-432 11-440 (441) 37 protein:vir:3868 Length: 417 # 100.0 3.3E-91 2.1E-94 516.6 42.8 404 1-432 1-414 (417) 38 protein:vir:81095 Length: 416 100.0 4E-91 2.5E-94 516.2 43.0 408 1-432 1-415 (416) 39 protein:vir:4598 Length: 416 # 100.0 4E-91 2.5E-94 516.2 43.0 408 1-432 1-415 (416) 40 protein:vir:98396 Length: 441 100.0 5.9E-91 3.7E-94 515.2 43.4 413 1-432 23-440 (441) 41 protein:vir:9702 Length: 406 # 100.0 5.5E-89 3.4E-92 504.4 42.6 397 1-427 1-406 (406) 42 protein:vir:101647 Length: 460 100.0 4.9E-89 3.1E-92 504.7 41.7 411 3-423 1-460 (460) 43 protein:vir:95378 Length: 406 100.0 1.4E-87 8.6E-91 496.8 42.8 399 1-428 1-406 (406) 44 protein:vir:8100 Length: 466 # 100.0 3.3E-87 2.1E-90 494.7 42.6 419 1-432 1-464 (466) 45 protein:vir:80134 Length: 403 100.0 1.2E-85 7.3E-89 486.2 39.8 394 1-428 1-403 (403) 46 protein:vir:8317 Length: 409 # 100.0 5.2E-86 3.3E-89 488.1 37.5 378 1-420 1-409 (409) 47 protein:vir:960 Length: 413 # 100.0 3.7E-85 2.3E-88 483.5 40.8 394 1-420 1-413 (413) 48 protein:vir:94666 Length: 723 100.0 2.3E-85 1.5E-88 484.6 39.1 402 1-432 1-443 (723) 49 protein:vir:3843 Length: 397 # 100.0 5.4E-84 3.4E-87 477.1 42.2 396 1-432 1-396 (397) 50 protein:vir:104259 Length: 403 100.0 1.2E-83 7.3E-87 475.2 41.2 391 1-432 1-403 (403) 51 protein:vir:102727 Length: 945 100.0 2.5E-83 1.6E-86 473.4 43.0 417 1-432 62-538 (945) 52 protein:vir:9359 Length: 348 # 100.0 6.4E-84 4E-87 476.7 39.1 346 66-425 1-348 (348) 53 protein:vir:6210 Length: 394 # 100.0 2.6E-82 1.6E-85 467.8 39.3 384 1-423 1-394 (394) 54 protein:vir:80796 Length: 574 100.0 5.1E-80 3.1E-83 455.3 41.5 427 1-432 27-524 (574) 55 protein:vir:80644 Length: 551 100.0 7.7E-80 4.8E-83 454.3 40.7 426 1-432 5-525 (551) 56 protein:vir:100187 Length: 385 100.0 8E-80 5E-83 454.2 40.6 377 1-423 1-385 (385) 57 protein:vir:9507 Length: 395 # 100.0 4.6E-79 2.8E-82 450.1 39.7 386 1-432 1-395 (395) 58 protein:vir:101289 Length: 395 100.0 4.6E-79 2.8E-82 450.1 39.7 386 1-432 1-395 (395) 59 protein:vir:100650 Length: 395 100.0 4.6E-79 2.8E-82 450.1 39.7 386 1-432 1-395 (395) 60 protein:vir:4854 Length: 386 # 100.0 6.5E-79 4E-82 449.2 40.5 382 1-424 1-386 (386) 61 protein:vir:4089 Length: 395 # 100.0 1.7E-79 1E-82 452.5 36.6 387 1-427 1-395 (395) 62 protein:vir:100882 Length: 383 100.0 8.5E-79 5.3E-82 448.6 39.8 377 1-421 1-383 (383) 63 protein:vir:95965 Length: 385 100.0 3.1E-79 1.9E-82 451.0 37.2 374 1-423 1-385 (385) 64 protein:vir:63755 Length: 547 100.0 3.1E-78 1.9E-81 445.5 41.4 426 1-432 1-513 (547) 65 protein:vir:7407 Length: 392 # 100.0 3.2E-78 2E-81 445.4 40.7 383 1-425 3-392 (392) 66 protein:vir:100691 Length: 535 100.0 3.4E-78 2.1E-81 445.3 40.5 425 1-432 1-513 (535) 67 protein:vir:94002 Length: 378 100.0 2.9E-78 1.8E-81 445.7 36.1 361 1-432 1-376 (378) 68 protein:vir:3989 Length: 392 # 100.0 6.7E-77 4.2E-80 438.2 40.7 383 1-425 3-392 (392) 69 protein:vir:1023 Length: 392 # 100.0 6.7E-77 4.2E-80 438.2 40.7 383 1-425 3-392 (392) 70 protein:vir:4995 Length: 384 # 100.0 4.3E-77 2.7E-80 439.2 37.4 373 1-399 1-384 (384) 71 protein:vir:93867 Length: 378 100.0 3.3E-77 2E-80 439.9 36.5 361 1-432 1-376 (378) 72 protein:vir:1082 Length: 359 # 100.0 9.2E-77 5.7E-80 437.4 38.7 352 1-393 1-359 (359) 73 protein:vir:1661 Length: 378 # 100.0 4.9E-77 3E-80 439.0 36.6 361 1-432 1-376 (378) 74 protein:vir:9641 Length: 395 # 100.0 1.5E-77 9.4E-81 441.7 33.8 381 1-426 1-395 (395) 75 protein:vir:78310 Length: 376 100.0 1.1E-76 6.6E-80 437.1 35.9 368 1-422 1-376 (376) 76 protein:vir:96579 Length: 576 100.0 1.9E-75 1.2E-78 430.2 40.7 422 1-432 32-522 (576) 77 protein:vir:99312 Length: 563 100.0 7.9E-75 4.9E-78 426.8 42.1 423 1-432 2-523 (563) 78 protein:vir:95599 Length: 563 100.0 7.9E-75 4.9E-78 426.8 42.1 423 1-432 2-523 (563) 79 protein:vir:94869 Length: 378 100.0 1.6E-75 9.8E-79 430.7 36.3 361 1-432 1-376 (378) 80 protein:vir:98643 Length: 395 100.0 1.9E-75 1.2E-78 430.3 36.7 383 1-426 1-395 (395) 81 protein:vir:4952 Length: 386 # 100.0 1.1E-74 6.6E-78 426.1 40.5 383 1-424 1-386 (386) 82 protein:vir:858 Length: 378 # 100.0 2.8E-75 1.8E-78 429.3 36.6 361 1-432 1-376 (378) 83 protein:vir:4828 Length: 382 # 100.0 4.9E-74 3E-77 422.5 41.1 373 1-424 1-382 (382) 84 protein:vir:3153 Length: 467 # 100.0 5.3E-74 3.3E-77 422.3 38.7 386 45-432 1-443 (467) 85 protein:vir:4194 Length: 540 # 100.0 1.7E-73 1E-76 419.6 38.5 407 1-432 6-461 (540) 86 protein:vir:4156 Length: 542 # 100.0 1.2E-73 7.4E-77 420.4 36.0 407 3-432 1-450 (542) 87 protein:vir:79772 Length: 648 100.0 2.2E-67 1.4E-70 386.0 40.4 418 1-432 8-497 (648) 88 protein:vir:99452 Length: 651 100.0 2.3E-68 1.4E-71 391.4 34.1 425 1-432 1-536 (651) 89 protein:vir:78641 Length: 278 100.0 9.5E-63 5.9E-66 360.6 31.9 278 66-357 1-278 (278) 90 protein:vir:79150 Length: 368 100.0 1.3E-54 8.2E-58 316.0 27.7 344 1-375 1-368 (368) 91 protein:vir:103971 Length: 376 100.0 1.8E-52 1.1E-55 304.3 32.6 321 1-364 26-376 (376) 92 protein:vir:267 Length: 348 # 100.0 6.2E-52 3.8E-55 301.3 31.2 323 1-365 1-348 (348) 93 protein:vir:79207 Length: 351 100.0 1.5E-51 9E-55 299.3 31.3 321 1-364 1-351 (351) 94 protein:vir:78191 Length: 351 100.0 2.8E-51 1.7E-54 297.7 31.5 321 1-364 1-351 (351) 95 protein:vir:100328 Length: 346 100.0 2.4E-51 1.5E-54 298.1 29.8 329 1-362 1-346 (346) 96 protein:vir:98567 Length: 340 100.0 6.2E-51 3.8E-54 295.8 30.9 323 1-361 1-340 (340) 97 protein:vir:1150 Length: 350 # 100.0 4.3E-50 2.7E-53 291.2 30.7 323 1-357 1-350 (350) 98 protein:vir:78749 Length: 337 100.0 3.1E-50 1.9E-53 292.0 29.4 321 1-358 1-337 (337) 99 protein:vir:5691 Length: 344 # 100.0 7.8E-50 4.9E-53 289.8 30.2 324 1-362 1-344 (344) 100 protein:vir:3780 Length: 345 # 100.0 6.7E-50 4.1E-53 290.2 29.8 332 1-359 1-345 (345) 101 protein:vir:6058 Length: 344 # 100.0 1.1E-49 7E-53 288.9 30.8 322 1-362 1-344 (344) 102 protein:vir:3743 Length: 345 # 100.0 1.8E-49 1.1E-52 287.8 31.2 330 1-359 1-345 (345) 103 protein:vir:4698 Length: 251 # 100.0 3.6E-50 2.2E-53 291.6 26.2 249 1-266 1-251 (251) 104 protein:vir:2013 Length: 344 # 100.0 1.7E-49 1E-52 288.0 29.2 324 1-362 1-344 (344) 105 protein:vir:98853 Length: 219 100.0 3.6E-42 2.2E-45 247.8 21.6 211 143-361 1-219 (219) 106 protein:vir:5249 Length: 437 # 100.0 8.1E-29 5E-32 174.6 30.4 401 1-430 1-437 (437) 107 protein:vir:107742 Length: 537 99.9 1.9E-24 1.2E-27 150.6 30.2 410 1-431 25-537 (537) 108 protein:vir:94049 Length: 532 99.9 1.1E-24 7.1E-28 151.9 28.0 414 1-432 17-510 (532) 109 protein:vir:79647 Length: 435 99.9 2.5E-24 1.5E-27 150.0 25.0 385 1-432 1-435 (435) 110 protein:vir:99563 Length: 862 99.9 7.2E-23 4.5E-26 142.0 30.2 407 1-432 66-564 (862) 111 protein:vir:107662 Length: 427 99.9 4.2E-23 2.6E-26 143.2 25.0 380 1-431 1-427 (427) 112 protein:vir:96068 Length: 765 99.9 7.2E-22 4.5E-25 136.5 30.7 408 1-432 37-535 (765) 113 protein:vir:104338 Length: 422 99.9 3.7E-22 2.3E-25 138.1 27.9 381 1-432 1-422 (422) 114 protein:vir:99232 Length: 526 99.8 4.3E-20 2.6E-23 126.8 34.4 413 1-432 1-448 (526) 115 protein:vir:79538 Length: 502 99.8 5.7E-22 3.5E-25 137.1 23.8 428 1-431 1-502 (502) 116 protein:vir:103860 Length: 528 99.8 7.4E-20 4.6E-23 125.5 35.0 413 1-432 1-449 (528) 117 protein:vir:79233 Length: 526 99.8 1.6E-19 1E-22 123.6 34.0 415 1-432 1-448 (526) 118 protein:vir:80040 Length: 461 99.8 1.6E-20 9.9E-24 129.1 24.9 392 1-431 1-461 (461) 119 protein:vir:108215 Length: 469 99.8 9.7E-19 6E-22 119.3 32.0 417 3-432 1-464 (469) 120 protein:vir:96738 Length: 505 99.8 5.3E-20 3.3E-23 126.3 21.2 423 1-431 8-505 (505) 121 protein:vir:95542 Length: 548 99.8 5.8E-20 3.6E-23 126.0 21.4 428 1-432 1-513 (548) 122 protein:vir:1986 Length: 512 # 99.8 1.3E-17 8.1E-21 113.1 32.6 406 1-432 1-439 (512) 123 protein:vir:99853 Length: 488 99.7 2.7E-17 1.7E-20 111.4 31.4 381 1-432 14-409 (488) 124 protein:vir:79063 Length: 491 99.7 2.2E-17 1.4E-20 111.9 30.3 399 1-432 3-422 (491) 125 protein:vir:389 Length: 530 # 99.7 4.3E-18 2.6E-21 115.8 24.7 427 1-432 1-529 (530) 126 protein:vir:10321 Length: 495 99.7 2.1E-18 1.3E-21 117.5 22.0 425 1-432 1-494 (495) 127 protein:vir:107880 Length: 491 99.7 6.4E-16 4E-19 103.9 33.2 395 1-432 3-422 (491) 128 protein:vir:3420 Length: 533 # 99.7 2.3E-17 1.4E-20 111.8 25.0 432 1-432 3-533 (533) 129 protein:vir:95254 Length: 488 99.7 6.8E-16 4.2E-19 103.7 32.7 411 1-432 1-487 (488) 130 protein:vir:106491 Length: 646 99.7 1.8E-18 1.1E-21 117.8 18.5 421 1-432 1-498 (646) 131 protein:vir:6382 Length: 553 # 99.7 2.9E-17 1.8E-20 111.3 22.4 429 3-432 1-551 (553) 132 protein:vir:79511 Length: 448 99.6 7.4E-16 4.6E-19 103.5 27.6 403 1-432 1-439 (448) 133 protein:vir:77981 Length: 448 99.6 2.1E-15 1.3E-18 101.0 30.0 400 1-432 1-438 (448) 134 protein:vir:98816 Length: 446 99.6 1.5E-15 9.4E-19 101.8 27.6 378 1-396 1-446 (446) 135 protein:vir:78589 Length: 695 99.6 6.1E-16 3.8E-19 104.0 23.8 411 1-432 52-550 (695) 136 protein:vir:101541 Length: 694 99.6 9.3E-16 5.8E-19 103.0 23.8 411 1-432 51-549 (694) 137 protein:vir:8654 Length: 629 # 99.6 1.4E-16 8.5E-20 107.5 19.2 413 1-432 1-519 (629) 138 protein:vir:102426 Length: 631 99.6 3.4E-16 2.1E-19 105.4 20.2 421 1-432 1-524 (631) 139 protein:vir:3648 Length: 695 # 99.6 1.2E-15 7.7E-19 102.3 23.3 411 1-432 52-550 (695) 140 protein:vir:107517 Length: 639 99.6 3.1E-16 1.9E-19 105.6 19.7 415 1-432 1-525 (639) 141 protein:vir:97900 Length: 639 99.6 3.1E-16 1.9E-19 105.6 19.7 415 1-432 1-525 (639) 142 protein:vir:99088 Length: 629 99.6 3.7E-16 2.3E-19 105.2 18.8 413 1-432 1-519 (629) 143 protein:vir:106716 Length: 698 99.6 2.3E-15 1.4E-18 100.8 22.8 413 1-432 52-553 (698) 144 protein:vir:106027 Length: 629 99.5 2.4E-15 1.5E-18 100.7 21.2 415 1-432 1-514 (629) 145 protein:vir:105782 Length: 449 99.5 4E-14 2.5E-17 94.0 25.7 374 1-432 23-448 (449) 146 protein:vir:78161 Length: 355 99.4 1.2E-12 7.5E-16 85.9 26.8 302 121-432 1-333 (355) 147 protein:vir:98883 Length: 517 99.1 2.2E-10 1.3E-13 73.6 25.2 409 1-425 1-517 (517) 148 protein:vir:79703 Length: 505 99.1 1.3E-09 7.8E-13 69.4 26.1 398 1-430 1-505 (505) 149 protein:vir:98444 Length: 434 99.1 3.7E-10 2.3E-13 72.3 23.0 364 41-431 1-434 (434) 150 protein:vir:7768 Length: 484 # 99.1 2E-09 1.2E-12 68.3 26.9 396 1-432 14-483 (484) 151 protein:vir:3028 Length: 500 # 99.0 6E-09 3.7E-12 65.7 26.9 402 1-430 1-500 (500) 152 protein:vir:9815 Length: 500 # 99.0 6E-09 3.7E-12 65.7 26.9 402 1-430 1-500 (500) 153 protein:vir:2427 Length: 485 # 99.0 8.1E-09 5E-12 65.0 27.3 396 1-432 6-484 (485) 154 protein:vir:4782 Length: 522 # 99.0 5.4E-09 3.3E-12 65.9 25.7 409 1-432 1-522 (522) 155 protein:vir:5839 Length: 533 # 99.0 2.7E-09 1.7E-12 67.5 23.9 413 1-432 4-508 (533) 156 protein:vir:99916 Length: 504 99.0 3.6E-09 2.2E-12 66.9 24.5 408 1-432 23-501 (504) 157 protein:vir:5961 Length: 503 # 98.9 1.1E-08 6.7E-12 64.2 28.5 406 1-432 13-497 (503) 158 protein:vir:80959 Length: 499 98.9 4.7E-09 2.9E-12 66.2 24.8 399 3-423 1-499 (499) 159 protein:vir:104082 Length: 485 98.9 7.8E-09 4.8E-12 65.0 25.8 398 1-432 8-483 (485) 160 protein:vir:94742 Length: 409 98.9 1E-08 6.4E-12 64.4 26.3 357 1-393 3-409 (409) 161 protein:vir:1587 Length: 508 # 98.9 8.9E-09 5.5E-12 64.7 25.5 401 1-432 1-508 (508) 162 protein:vir:2341 Length: 488 # 98.9 3.3E-09 2E-12 67.1 23.0 406 1-428 10-488 (488) 163 protein:vir:38 Length: 496 # N 98.9 7.6E-09 4.7E-12 65.1 24.7 402 3-432 1-496 (496) 164 protein:vir:7987 Length: 456 # 98.9 1.2E-09 7.4E-13 69.5 19.5 384 1-426 7-456 (456) 165 protein:vir:105819 Length: 456 98.9 1.4E-09 8.4E-13 69.2 19.3 385 1-426 7-456 (456) 166 protein:vir:102602 Length: 456 98.9 1.4E-09 8.4E-13 69.2 19.3 385 1-426 7-456 (456) 167 protein:vir:99072 Length: 479 98.9 1.2E-08 7.7E-12 63.9 24.0 391 1-432 15-470 (479) 168 protein:vir:8184 Length: 474 # 98.8 8.9E-09 5.6E-12 64.7 23.0 398 1-423 17-474 (474) 169 protein:vir:96494 Length: 501 98.8 1.6E-08 1E-11 63.3 24.1 407 1-432 38-497 (501) 170 protein:vir:105889 Length: 474 98.8 3.1E-08 2E-11 61.7 28.1 403 1-430 1-474 (474) 171 protein:vir:94101 Length: 474 98.8 3.1E-08 2E-11 61.7 28.1 403 1-430 1-474 (474) 172 protein:vir:4898 Length: 502 # 98.8 3.4E-08 2.1E-11 61.5 26.3 411 1-432 31-498 (502) 173 protein:vir:78907 Length: 518 98.8 2.2E-08 1.3E-11 62.6 23.8 405 1-429 1-518 (518) 174 protein:vir:103219 Length: 201 98.8 2.2E-10 1.4E-13 73.5 12.2 179 225-432 1-201 (201) 175 protein:vir:9306 Length: 511 # 98.8 5.7E-08 3.6E-11 60.3 25.0 409 1-432 39-506 (511) 176 protein:vir:1634 Length: 409 # 98.7 7.4E-08 4.6E-11 59.7 25.7 349 1-393 3-409 (409) 177 protein:vir:4223 Length: 486 # 98.7 1.3E-07 7.8E-11 58.4 25.5 395 1-431 6-486 (486) 178 protein:vir:93747 Length: 472 98.7 1.3E-07 7.9E-11 58.4 28.2 386 1-430 23-472 (472) 179 protein:vir:79043 Length: 479 98.6 1.7E-07 1.1E-10 57.7 24.2 386 1-428 22-479 (479) 180 protein:vir:103951 Length: 511 98.6 1.8E-07 1.1E-10 57.5 26.4 411 1-432 39-507 (511) 181 protein:vir:2732 Length: 501 # 98.6 2.7E-07 1.7E-10 56.6 26.3 406 1-432 38-496 (501) 182 protein:vir:99522 Length: 470 98.6 2.7E-07 1.7E-10 56.6 27.1 384 1-432 39-470 (470) 183 protein:vir:96240 Length: 511 98.6 2.8E-07 1.7E-10 56.5 26.0 410 1-432 39-511 (511) 184 protein:vir:95806 Length: 440 98.6 3E-07 1.9E-10 56.3 25.7 390 3-428 1-440 (440) 185 protein:vir:97171 Length: 512 98.5 3.9E-07 2.4E-10 55.7 26.2 408 1-432 42-508 (512) 186 protein:vir:105292 Length: 478 98.5 4.4E-07 2.7E-10 55.4 29.7 384 1-432 2-475 (478) 187 protein:vir:94805 Length: 492 98.5 5E-07 3.1E-10 55.1 29.4 391 1-430 43-492 (492) 188 protein:vir:106639 Length: 481 98.5 5.7E-07 3.5E-10 54.8 27.2 409 1-432 6-480 (481) 189 protein:vir:4073 Length: 279 # 98.4 2E-09 1.3E-12 68.3 8.5 278 54-396 1-279 (279) 190 protein:vir:97336 Length: 492 98.4 7.7E-07 4.8E-10 54.1 28.0 388 1-430 43-492 (492) 191 protein:vir:9751 Length: 422 # 98.4 8.9E-07 5.5E-10 53.7 29.1 364 1-417 4-422 (422) 192 protein:vir:80680 Length: 441 98.4 9E-07 5.6E-10 53.7 27.1 376 1-432 6-439 (441) 193 protein:vir:78805 Length: 511 98.3 1.2E-06 7.7E-10 53.0 26.2 412 1-432 39-511 (511) 194 protein:vir:96366 Length: 511 98.3 1.2E-06 7.7E-10 53.0 26.2 412 1-432 39-511 (511) 195 protein:vir:3964 Length: 453 # 98.3 1.3E-06 8.1E-10 52.8 27.7 393 1-431 19-453 (453) 196 protein:vir:95113 Length: 474 98.3 1.4E-06 8.4E-10 52.8 29.4 387 1-432 33-473 (474) 197 protein:vir:9871 Length: 429 # 98.3 1.5E-06 9.3E-10 52.5 23.8 371 1-431 1-429 (429) 198 protein:vir:9568 Length: 410 # 98.3 1.7E-06 1E-09 52.3 27.1 352 1-419 1-410 (410) 199 protein:vir:1236 Length: 483 # 98.3 1.7E-06 1E-09 52.3 29.2 388 1-430 34-483 (483) 200 protein:vir:96266 Length: 474 98.3 1.8E-06 1.1E-09 52.1 25.9 386 1-432 26-471 (474) 201 protein:vir:95899 Length: 474 98.3 1.8E-06 1.1E-09 52.1 25.9 386 1-432 26-471 (474) 202 protein:vir:2500 Length: 501 # 98.3 1.9E-06 1.1E-09 52.0 23.6 393 1-432 23-498 (501) 203 protein:vir:99781 Length: 511 98.2 2.2E-06 1.4E-09 51.6 26.2 408 1-432 39-511 (511) 204 protein:vir:78537 Length: 480 98.2 2.5E-06 1.5E-09 51.3 26.7 396 1-432 1-475 (480) 205 protein:vir:96839 Length: 474 98.2 2.6E-06 1.6E-09 51.2 29.3 388 1-432 2-474 (474) 206 protein:vir:78083 Length: 537 98.2 3.2E-06 2E-09 50.7 32.9 404 1-432 8-524 (537) 207 protein:vir:78227 Length: 480 98.2 3.4E-06 2.1E-09 50.5 27.2 402 1-432 1-476 (480) 208 protein:vir:94498 Length: 474 98.1 3.9E-06 2.4E-09 50.2 28.5 394 1-430 13-474 (474) 209 protein:vir:97447 Length: 474 98.1 3.9E-06 2.4E-09 50.2 28.5 394 1-430 13-474 (474) 210 protein:vir:105461 Length: 470 98.0 6.8E-06 4.2E-09 48.9 24.6 378 1-424 18-470 (470) 211 protein:vir:3609 Length: 452 # 98.0 8E-06 5E-09 48.5 24.7 386 1-432 17-450 (452) 212 protein:vir:106571 Length: 499 97.9 1.4E-05 8.7E-09 47.2 27.4 397 1-432 1-490 (499) 213 protein:vir:733 Length: 453 # 97.8 1.8E-05 1.1E-08 46.6 26.3 396 1-432 1-452 (453) 214 protein:vir:107112 Length: 478 97.8 2.1E-05 1.3E-08 46.2 29.4 384 1-432 2-475 (478) 215 protein:vir:94546 Length: 506 97.7 2.5E-05 1.6E-08 45.8 25.2 402 1-432 1-502 (506) 216 protein:vir:102950 Length: 471 97.6 3.9E-05 2.4E-08 44.8 25.1 384 1-425 1-471 (471) 217 protein:vir:9922 Length: 489 # 97.2 0.00013 8E-08 41.9 27.3 403 1-431 13-489 (489) 218 protein:vir:96179 Length: 468 97.1 0.00017 1E-07 41.3 28.3 381 1-425 14-468 (468) 219 protein:vir:98265 Length: 524 96.9 0.00029 1.8E-07 40.0 23.7 411 1-432 4-523 (524) 220 protein:vir:101494 Length: 527 96.3 0.00072 4.4E-07 37.8 22.6 403 1-432 1-523 (527) 221 protein:vir:102239 Length: 527 96.3 0.00078 4.9E-07 37.6 22.7 403 1-432 1-523 (527) 222 protein:vir:104500 Length: 537 95.9 0.0013 8.4E-07 36.3 22.3 414 1-431 1-537 (537) 223 protein:vir:104892 Length: 558 95.8 0.0014 8.5E-07 36.3 24.1 422 1-432 1-546 (558) 224 protein:vir:97265 Length: 513 95.1 0.0027 1.7E-06 34.6 30.5 394 1-432 20-500 (513) 225 protein:vir:97376 Length: 320 95.0 0.0012 7.3E-07 36.6 10.3 310 1-423 1-320 (320) 226 protein:vir:108049 Length: 524 94.7 0.0037 2.3E-06 33.9 21.8 411 1-432 1-523 (524) 227 protein:vir:101806 Length: 516 94.2 0.0052 3.3E-06 33.1 19.5 411 1-424 1-516 (516) 228 protein:vir:101189 Length: 516 94.2 0.0052 3.3E-06 33.1 19.5 411 1-424 1-516 (516) 229 protein:vir:5665 Length: 511 # 93.8 0.0062 3.8E-06 32.7 18.9 407 1-432 1-510 (511) 230 protein:vir:94956 Length: 452 93.5 0.0074 4.6E-06 32.3 25.2 379 1-431 1-452 (452) 231 protein:vir:105154 Length: 525 92.3 0.012 7.5E-06 31.1 14.7 393 1-432 51-513 (525) 232 protein:vir:6596 Length: 521 # 92.2 0.012 7.6E-06 31.1 21.7 411 1-432 2-520 (521) 233 protein:vir:106999 Length: 564 91.9 0.014 8.6E-06 30.8 23.8 422 1-432 1-562 (564) 234 protein:vir:102330 Length: 451 91.5 0.016 9.7E-06 30.5 24.4 373 1-430 1-451 (451) 235 protein:vir:100598 Length: 516 91.2 0.017 1.1E-05 30.3 20.6 411 1-424 1-516 (516) 236 protein:vir:106282 Length: 521 91.1 0.017 1.1E-05 30.2 22.5 409 1-432 1-520 (521) 237 protein:vir:78393 Length: 489 90.4 0.021 1.3E-05 29.8 25.0 394 1-432 22-488 (489) 238 protein:vir:103177 Length: 533 88.9 0.029 1.8E-05 29.0 23.6 422 1-432 1-530 (533) 239 protein:vir:81017 Length: 521 88.9 0.03 1.8E-05 29.0 22.0 411 1-432 2-520 (521) 240 protein:vir:95149 Length: 501 85.6 0.052 3.2E-05 27.6 25.2 393 1-425 1-501 (501) 241 protein:vir:80453 Length: 535 85.3 0.054 3.3E-05 27.5 24.1 398 1-429 32-535 (535) 242 protein:vir:7208 Length: 524 # 83.2 0.07 4.4E-05 26.9 22.0 410 1-432 1-523 (524) 243 protein:vir:103458 Length: 524 82.9 0.073 4.5E-05 26.8 22.1 410 1-432 1-523 (524) 244 protein:vir:95014 Length: 491 82.1 0.08 4.9E-05 26.6 24.2 392 1-427 22-491 (491) 245 protein:vir:6896 Length: 523 # 79.6 0.1 6.4E-05 26.0 20.9 410 1-432 1-522 (523) 246 protein:vir:94709 Length: 522 67.5 0.25 0.00016 23.9 18.6 405 1-432 1-521 (522) 247 protein:vir:1538 Length: 535 # 59.8 0.39 0.00024 22.9 13.3 394 1-432 1-523 (535) 248 protein:vir:3361 Length: 535 # 41.0 0.95 0.00059 20.7 14.3 392 1-432 1-523 (535) 249 protein:vir:7430 Length: 563 # 38.8 1 0.00065 20.5 24.3 410 1-432 1-541 (563) 250 protein:vir:96783 Length: 488 27.9 1.8 0.0011 19.2 25.8 383 1-417 14-488 (488) 251 protein:vir:572 Length: 506 # 26.5 1.9 0.0012 19.0 8.1 403 1-432 34-504 (506) 252 protein:vir:103765 Length: 549 22.6 2.4 0.0015 18.5 17.2 406 1-432 1-546 (549) No 1 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=1.6e-112 Score=633.53 Aligned_cols=432 Identities=100% Similarity=1.425 Sum_probs=419.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||||||+++|++.++++.+....+...+.+..|+|.+.+...++.++|+++++|++||++||++||++|++++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999999999999998888888899999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88889999999999999999999999999999999999999999999999999999999999999999888877777888 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) |.+..+|..+.|+++||||+|++++.++++|.||+..+..++....+++++..++|+||++|+++++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88999999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.++|..|+|+++++++|++|+++++++.|+|+++.+++++++||++|||||.+||..+.+++++.+++.+.|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||+|+++.|+++|++++|++.++..|++++||.+.|++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+|++|++..++...+||+++++.+++++|+| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999889999999999999999999 No 2 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=1.6e-112 Score=633.53 Aligned_cols=432 Identities=100% Similarity=1.425 Sum_probs=419.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||||||+++|++.++++.+....+...+.+..|+|.+.+...++.++|+++++|++||++||++||++|++++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999999999999998888888899999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88889999999999999999999999999999999999999999999999999999999999999999888877777888 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) |.+..+|..+.|+++||||+|++++.++++|.||+..+..++....+++++..++|+||++|+++++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88999999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.++|..|+|+++++++|++|+++++++.|+|+++.+++++++||++|||||.+||..+.+++++.+++.+.|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||+|+++.|+++|++++|++.++..|++++||.+.|++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+|++|++..++...+||+++++.+++++|+| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999889999999999999999999 No 3 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=1.6e-112 Score=633.53 Aligned_cols=432 Identities=100% Similarity=1.425 Sum_probs=419.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||||||+++|++.++++.+....+...+.+..|+|.+.+...++.++|+++++|++||++||++||++|++++++++++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999999999999998888888899999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..++.+........+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88889999999999999999999999999999999999999999999999999999999999999999888877777888 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) |.+..+|..+.|+++||||+|++++.++++|.||+..+..++....+++++..++|+||++|+++++++..+++++.+++ T Consensus 161 y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~ 240 (432) T protein:vir:10 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) T ss_pred EEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88999999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.++|..|+|+++++++|++|+++++++.|+|+++.+++++++||++|||||.+||..+.+++++.+++.+.|++ T Consensus 241 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~~ 320 (432) T protein:vir:10 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) T ss_pred HHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||+|+++.|+++|++++|++.++..|++++||.+.|++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 321 ~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~~~ 400 (432) T protein:vir:10 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+|++|++..++...+||+++++.+++++|+| T Consensus 401 ~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999999889999999999999999999 No 4 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=5e-110 Score=619.82 Aligned_cols=429 Identities=98% Similarity=1.401 Sum_probs=411.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|.+ +.++.+.+....+...+.+..|+|.+.+...++.++||++++|++||++||++||++||+++++++++ T Consensus 1 M~~~~~~f~---~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~ 77 (429) T protein:vir:10 1 MDSVKKFFN---FEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) T ss_pred Cchhhhhhc---ccccCcccccccCCChHHHHHHhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 999987654 45666677777888888999999999999999999999999999999999999999999999999999 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|++|++..++.+........+ T Consensus 78 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~ 157 (429) T protein:vir:10 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 88889999999999999999999999999999999999999999999999999999999999999999888877777888 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) |.+..+|..+.|+++||||+|++++.++++|.||+..+...+....+++++..++|+||++|+++++++..+++++.+++ T Consensus 158 ~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~ 237 (429) T protein:vir:10 158 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 237 (429) T ss_pred EEEccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHH Confidence 88999999999999999999988889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.++|..|+|+++|+++|++|+++++++.|+|++|.+++.+++||++|||||.+|+..+.+++++.+++.+.|++ T Consensus 238 ~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~f~~ 317 (429) T protein:vir:10 238 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 317 (429) T ss_pred HHHHHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||.|+++.|+++|++++|++.++..+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++ T Consensus 318 ~~l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~ 397 (429) T protein:vir:10 318 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 397 (429) T ss_pred HHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+|++|++..++.+.+||+.+++..++++||| T Consensus 398 ~~n~~~~d~~~~~~~k~g~~~~~~~~~~~e~~ 429 (429) T protein:vir:10 398 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 429 (429) T ss_pred cccccchhhccccccCCCCCCCCCCCCCCCCC Confidence 99999999998889999999999999999999 No 5 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=1.6e-103 Score=584.13 Aligned_cols=409 Identities=42% Similarity=0.754 Sum_probs=376.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|+++|..... . ....++.+..|+|.. .++.+.++++++|++||++||++||++|++++++++++ T Consensus 1 MG~~~~~~~~~~~~~~----~--~~~~~~~~~~~~g~~----~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~ 70 (411) T protein:vir:81 1 MGWWSRLTRFFRPRNE----T--VDMTNPLLLQWLGVD----PDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERG 70 (411) T ss_pred CchHHHHHhhccCccc----c--cccchHHHHHHhcCc----ccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCc Confidence 9999999888753321 2 222345667777754 36788999999999999999999999999999999999 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .+...+|+++++|+.+||++||+++||+.++.+++++||+|++++++ .|.+.+|+|++|+.|++..++.+........+ T Consensus 71 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~ 149 (411) T protein:vir:81 71 IVKSDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLGEKNAIW 149 (411) T ss_pred eeeecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCcccccccceEE Confidence 88888999999999999999999999999999999999999999998 58999999999999999998876554444444 Q ss_pred EE--ecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 161 YV--VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 161 ~~--~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) |. ...+|....|+++||||+|++++.++++|+||+.++..++.+..+++++..++|+||+.|+|+++++..+++++.+ T Consensus 150 ~~~~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~ 229 (411) T protein:vir:81 150 YRYNDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARD 229 (411) T ss_pred EEEEecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHH Confidence 43 3457788889999999999888889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~ 318 (432) +++++|.+.++|.+|+|+++++++|++|+++++++.|+|++|.+++.+++||++|||||.+||..+.++++|.+++.+.| T Consensus 230 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f 309 (411) T protein:vir:81 230 RLVKGFEQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAF 309 (411) T ss_pred HHHHHHHHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee Q lcl|Aclame:pro 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 398 (432) Q Consensus 319 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~ 398 (432) +++||.|+++.|+++|++++|++.++..+++++||.+.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++ T Consensus 310 ~~~~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggD~~ 389 (411) T protein:vir:81 310 YVDTLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPADDYGNNL 389 (411) T ss_pred HHHHHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccccccccccccccCCCCCC Q lcl|Aclame:pro 399 LVNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 399 ~~~~n~~~~~~~~~~~~~gg~~ 420 (432) ++++|++|++..+++..+|||. T Consensus 390 ~~~~n~~pl~~~~~~~~kgGd~ 411 (411) T protein:vir:81 390 MANGNYIPLSMLGANYGKGGDS 411 (411) T ss_pred eeccCccchhhhhhhhccCCCC Confidence 9999999999888777777777 No 6 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=2.3e-101 Score=572.29 Aligned_cols=418 Identities=54% Similarity=0.902 Sum_probs=375.0 Q ss_pred CchHHHHHHhcccccccccc---ccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQ---VIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) ||||++|.+.........+. ..........+..++|.. ....++.+.||++++|++||++||++||++|+++++.+ T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~~~ 79 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFGIK-LNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYKDK 79 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhcccc-CCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEecC Confidence 99999885433211111111 111222334455666654 45578999999999999999999999999999999865 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) ++ ..+|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|++|++..+.++...... T Consensus 80 ~~----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~~~~~~~~~ 155 (422) T protein:vir:13 80 EE----YKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDDDNFLSSLS 155 (422) T ss_pred cc----cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcCCcceeccc Confidence 43 34699999999999999999999999999999999999999999999999999999999999998877655444 Q ss_pred eeEEEe-cccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 158 KMWYVV-NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 158 ~~~~~~-~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) ..+|.+ ..+|....+++++|||++.+++.++++|.||+..+..++.+..++++++.++|+||++|+|++++++.+++++ T Consensus 156 ~~~y~~~~~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~ 235 (422) T protein:vir:13 156 KVWYVVTDKNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDEKA 235 (422) T ss_pred eEEEEEEeCCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHH Confidence 444443 4667888899999999998888899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) .+++++.|++.++|.+|+|+++|+++|++|+++++++.|+|++|.+++.+++||++|||||.+|+..+.++++|.+++.+ T Consensus 236 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~~~ 315 (422) T protein:vir:13 236 KKIFKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQQK 315 (422) T ss_pred HHHHHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 396 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd 396 (432) .|+++||.|++++||++|++++|++.++..|++++||.+.+++.|.+++++.+.+++++|+||+||+|+++|+||+|||| T Consensus 316 ~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD 395 (422) T protein:vir:13 316 DFYVTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPVEGGD 395 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcC Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999 Q ss_pred eeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 397 RLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 397 ~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) ++++++|++|++..+++..+||+++++ T Consensus 396 ~~~~~~n~~~l~~~~~~~~~~g~~~g~ 422 (422) T protein:vir:13 396 RLLVNGNMIPIEMAGEQYKKGGEKGGK 422 (422) T ss_pred eeeeccCccchhhcccccccCCCcCCC Confidence 999999999999999888888888877 No 7 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=1e-99 Score=563.29 Aligned_cols=408 Identities=56% Similarity=0.999 Sum_probs=373.1 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |-|...++ + .....+..+..+..|+|.+.+...|+.++||++++|++||++||++||++||++++.++ + T Consensus 1 m~f~~~~~------~----~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-~ 69 (409) T protein:vir:10 1 MLFRKGFK------N----QSQEISIDDKKILEWLGINPSETYVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKD-G 69 (409) T ss_pred Cccccccc------C----cCCCCCCChHHHHHHhcCCcCcceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecC-C Confidence 66442221 1 12234455667889999988888999999999999999999999999999999998754 4 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .+...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+..+......... T Consensus 70 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~ 149 (409) T protein:vir:10 70 IKRVPDHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVW 149 (409) T ss_pred eeeccCchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCccccccceEE Confidence 55667899999999999999999999999999999999999999999999999999999999999998876665544444 Q ss_pred EE-ecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 161 YV-VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) Q Consensus 161 ~~-~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 239 (432) |. ....|..+.|+++||||+|+++ .++++|.||+..+...+....++++++.++|+||++|++++++++.+++++.++ T Consensus 150 y~~~~~~g~~~~~~~~evih~r~~~-~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~ 228 (409) T protein:vir:10 150 YLYTDDLGQRHKFMSDEILHFKGLT-ADGLAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAEEV 228 (409) T ss_pred EEEEeCCceeEEeccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHHHH Confidence 44 3456778899999999999664 567999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) Q Consensus 240 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~ 319 (432) +++.|++.++|..|+|+++++++|++|++++.++.|+|++|++++++++||++|||||.+|+..+.+++++.+++.+.|+ T Consensus 229 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~f~ 308 (409) T protein:vir:10 229 FKENFERMSSGLKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNREFY 308 (409) T ss_pred HHHHHHHHhccccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 399 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~ 399 (432) ++||.|++++|+++|+++++.+.++..+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||+||||+++ T Consensus 309 ~~~l~P~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~ggD~~~ 388 (409) T protein:vir:10 309 IDTLQSILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPLEGGDVLL 388 (409) T ss_pred HHHHHHHHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeee Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccccCCCCCC Q lcl|Aclame:pro 400 VNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 400 ~~~n~~~~~~~~~~~~~gg~~ 420 (432) +|+|++|++..+++..+||++ T Consensus 389 ~~~n~~~~~~~~~~~~kgGe~ 409 (409) T protein:vir:10 389 INGNMIPVKMAGEQYSKGGEK 409 (409) T ss_pred eccCccchhhccccccccCCC Confidence 999999999988888888887 No 8 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=6.7e-99 Score=558.81 Aligned_cols=408 Identities=24% Similarity=0.381 Sum_probs=356.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) +.||++|.+. +. ...+..+. ......+.+.+.+...|+.+.||++++|++||++||++||++|++++++++++ T Consensus 16 ~~~~~~lf~~---~~-~~~~~~~~---~~~~~~~~~~~~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~~~ 88 (424) T protein:vir:45 16 RVLLDALFRS---KS-LENPSTPI---TGDAVDTDGLFRADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHKGK 88 (424) T ss_pred hHHHHhhccc---cC-CCCCcccc---chhhhhhhccccCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecCCc Confidence 7777776321 11 11111111 22334556667777889999999999999999999999999999999998888 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++...+||++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|..|++..++. ... T Consensus 89 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~~~-------~~~ 161 (424) T protein:vir:45 89 VEPARDHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNTGG-------RYT 161 (424) T ss_pred eeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEcCC-------eEE Confidence 8888899999999999999999999999999999999999999999999999999999999999877653 233 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) |.+...+....|++++|||+|++ ..++.+|.||+..+.+.+.+..++++++.++|+||++|+++++++..+++++.+++ T Consensus 162 y~~~~~~~~~~~~~~eVih~r~~-~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~ 240 (424) T protein:vir:45 162 YGLYNEYGAFAISPDDMIHIRAL-GNNQKMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGWL 240 (424) T ss_pred EEEEecCceEEECcccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHH Confidence 44445555678999999999965 45789999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhccc-ccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGL-QNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) Q Consensus 241 ~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~ 319 (432) ++.|++.++|. +|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++++|.+++.+.|+ T Consensus 241 ~~~~~~~~~g~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f~ 320 (424) T protein:vir:45 241 KDQWQKASQALRRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQFV 320 (424) T ss_pred HHHHHHHhccccccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999885 58999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 399 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~ 399 (432) ++||.|+++.||++|+++||++.++..|++++||.+.+++.|.+++++.+.+++++|+||+||+|+++|+||+||||+++ T Consensus 321 ~~tL~P~~~~ie~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi~ggD~~~ 400 (424) T protein:vir:45 321 RYTMMPWVTNWEQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPVEGLDEML 400 (424) T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 VNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 400 ~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +|.|+.+.......... +++.+++ T Consensus 401 ~~~n~~~~~~~~~~~~~---------~~~~~~~ 424 (424) T protein:vir:45 401 VSVNAANPAGDFKPPKN---------DEGKTNE 424 (424) T ss_pred ecccccccccccCCCCC---------CCCCCCC Confidence 99998764422111111 1111111 No 9 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=1.7e-98 Score=556.61 Aligned_cols=411 Identities=30% Similarity=0.484 Sum_probs=356.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc---CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG---ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) ||||++|.+. +...... .. ..+..+++ .+.+...|+.+.++++++|++||++||++||++|+++++.+ T Consensus 1 Mg~f~~lf~r-----~~~~~~~-~~---~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~ 71 (414) T protein:vir:44 1 MVFFSGLFQR-----KSDAPVT-TP---AELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLN 71 (414) T ss_pred Cchhhhhhcc-----CccCccc-ch---hhHhHhhccCccccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEec Confidence 9999987321 1111111 11 12233333 34456678999999999999999999999999999999999 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) +++++...+|+++++|+.+||++|++++||+.++.+++++||+|++++++ .|.+.+|+|++|..|++..+..+. T Consensus 72 ~~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~----- 145 (414) T protein:vir:44 72 GSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSWE----- 145 (414) T ss_pred CCceeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCCc----- Confidence 99988889999999999999999999999999999999999999999886 699999999999999998876532 Q ss_pred eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 158 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) ..|+....+|....|++++|||+|++ +.++++|.||+..+..++.+..+++++..++|+||++|+|+++++..+++++. T Consensus 146 ~~y~~~~~~g~~~~~~~~evih~~~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~ 224 (414) T protein:vir:44 146 PVYQVTFPDGSTDVLSQEDIWHVRTL-TLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAY 224 (414) T ss_pred EEEEEEecCceEEEEccccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHH Confidence 23445556778889999999999965 56889999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~ 317 (432) ++++++|.+.++|..|+|+++++++|++|++++.++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.+. T Consensus 225 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~ 304 (414) T protein:vir:44 225 ERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLG 304 (414) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) |+++||.|++++|+++|+++++.+.+. .+++++||.+.|++.|.+++++.+++++++|++|+||+|+++|+||+||||+ T Consensus 305 ~~~~~l~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~ 383 (414) T protein:vir:44 305 FINYSLVPYLTRIEQRINTGLVRKSKQ-GVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDV 383 (414) T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccc-CceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Confidence 999999999999999999999988775 4789999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) +++|+|+++....+....++++.. .+++.+. T Consensus 384 ~~~~~n~~~~~~~~~~~~~~~~~~--~~d~~~~ 414 (414) T protein:vir:44 384 YLTPMNMTTKPSDGSKAGKQKDNA--NADETTS 414 (414) T ss_pred ecccccccccCCccccCCCCCCCC--CCCCCCC Confidence 999999976654332211111111 1111111 No 10 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=2.9e-98 Score=555.33 Aligned_cols=429 Identities=22% Similarity=0.332 Sum_probs=357.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++...............+...+.+..+.+.+.+...|+.+.||++++|++||++||++||++|+++++.++++ T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYNLGATASSGERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGT 80 (457) T ss_pred CchhhhhhccccccccccccccccccchhhhhhccccccCCceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecCCc Confidence 99999885432222212222233344444555556667778899999999999999999999999999999999987766 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++. .+|+.+..|+.+||++|++++||+.++.+++++||+|+++.++ .|.+.+|+|++|.+|++..+............ T Consensus 81 ~~~-~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:62 81 RKE-IDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred ccc-ccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEeccCCccceeEEE Confidence 554 4555555555689999999999999999999999999998665 68999999999999999887654433344444 Q ss_pred EEecccCce---EEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 161 YVVNTGGQQ---RVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 161 ~~~~~~~~~---~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) |.+..+|.. ..|++++|||||++++.+.++|+||+.++...+.+..++++++.++|+||++|+|+++++..+++++. T Consensus 159 y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:62 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHHHH Confidence 555544433 45899999999988887779999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 315 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~ 315 (432) +++++.|++.++|.+|+|++++|++|++|+++++++.|+|++|++++++++||++|||||.+||..+.+++ +|.+++. T Consensus 239 ~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:62 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998877765 7899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.|+++.|+++|+++++++.+. .+++++||++.|++.|.+++++.+.+++++|+||+||+|+++||||+||| T Consensus 319 ~~f~~~~l~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g 397 (457) T protein:vir:62 319 IAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988764 57899999999999999999999999999999999999999999999986 Q ss_pred --ceeeeccccccccccccccCCCCCCCC--------CCCC-CCCCCC Q lcl|Aclame:pro 396 --DRLLVNGNMLPIDMAGQAYLKGGDTNG--------EVSK-EGNEGN 432 (432) Q Consensus 396 --d~~~~~~n~~~~~~~~~~~~~gg~~~~--------~~~~-~~~e~~ 432 (432) |++++|+|+.+++...+........+. ++++ ++.+++ T Consensus 398 ~~D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (457) T protein:vir:62 398 LGEKYRVPLNLGEIGEEPEPEPAPAPPAIDPPAEEPADDEEPDNAEGD 445 (457) T ss_pred CcceeeeccccccccccccccccCCCccCCCCccCCCCCCCCCCCCCC Confidence 999999999887765443322111110 0111 111111 No 11 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=3.1e-98 Score=555.18 Aligned_cols=429 Identities=22% Similarity=0.354 Sum_probs=367.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++.+.............+..++.+..+.+.+.+...|+.+.||++++|++||++||++||++|+++++.++++ T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNLGAVAASGETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGS 80 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhhcccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999987765544434444444555666777788888888999999999999999999999999999999999998888 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ++....|++..+|+..|| +|++++||+.++.+++++||+|+++.++ .|.+.+|+|++|.+|++..+............ T Consensus 81 ~~~~~~~~l~~~ln~~~n-~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:13 81 RKEIVTPEWLDYPNAEPG-GMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred ccccccchHHHhccccCC-CCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEEecCCCccceeEEE Confidence 888888999999986666 6999999999999999999999999776 58999999999999999877654333333344 Q ss_pred EEecccCce---EEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 161 YVVNTGGQQ---RVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 161 ~~~~~~~~~---~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) |.+..++.. ..|++++|||++++++.+.++|+||+..+...+.+..++++++.++|+||++|+++++++..++++++ T Consensus 159 y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:13 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHHHH Confidence 555544433 45899999999988887789999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 315 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~ 315 (432) +++++.|++.++|.+|+|+++||++|++|+++++++.|+|++|++++.+++||++|||||.+||..+.+++ +|.+++. T Consensus 239 ~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:13 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999998777655 7899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.|+++.|+++|+++++++.+. .+++++||.+.|++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 319 ~~f~~~tl~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~~g 397 (457) T protein:vir:13 319 IAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccc-CceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999987764 67889999999999999999999999999999999999999999999886 Q ss_pred --ceeeeccccccccccccccCC---------CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 --DRLLVNGNMLPIDMAGQAYLK---------GGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 --d~~~~~~n~~~~~~~~~~~~~---------gg~~~~~~~~~~~e~~ 432 (432) |++++|+|+.+++..++.... .++.+++.+.++..++ T Consensus 398 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 445 (457) T protein:vir:13 398 LGEKYRVPLNLGEVGEEPEPEPAPAPPAIEPPAEEPDEEPEPEGKPDD 445 (457) T ss_pred cccceeeccccccccccccccccCCCCCCCCCccccCCCCCCCCCCcc Confidence 999999999887653332211 1111111111111111 No 12 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=1e-97 Score=552.30 Aligned_cols=408 Identities=21% Similarity=0.290 Sum_probs=352.8 Q ss_pred CchHHHHHHhccccccccccc----------------cccCCchHHHHHhhc-CCcCcccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV----------------IELNKDDEKLLEWLG-ISPSTISVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~g-~~~~~~~v~~~~a~~~~~v~~~i~~ia 63 (432) |||||+|++....++...... ......++.+..|++ .+.+...++.+.|+++++|++||++|| T Consensus 1 Mgl~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~ci~~Ia 80 (431) T protein:vir:10 1 MGLFDFIRREKQPEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYIRRGELNGGTGRETRALRNMAVLRCVTLIS 80 (431) T ss_pred CcchhhhhcCcccccccccccccccccccccccccccccccccchHHHHhhccCccCcceechhhhhccHHHHHHHHHHH Confidence 999999987543322111110 000112234455553 445666789999999999999999999 Q ss_pred HhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcce Q lcl|Aclame:pro 64 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKV 143 (432) Q Consensus 64 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v 143 (432) ++||++|+++++.+ ++++...+||++++|+.+||++|++++||+.++.+++++||+|+++.++. |.+.+|+|++|.+| T Consensus 81 ~~iA~lp~~v~~~~-~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-g~~~~L~pl~~~~v 158 (431) T protein:vir:10 81 GTIGMLPMNLISSD-DSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWSG-NRPIRLIPMDRGSA 158 (431) T ss_pred HhhccCceEEEEec-CceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-CceEEEEEEcCcee Confidence 99999999999875 45567788999999999999999999999999999999999999999985 88999999999999 Q ss_pred EEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 144 TVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVK 223 (432) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 223 (432) ++..+..+. ..|+....+|..+.|+++||||||++ ..++++|+||+..+...+.+..+++++..++|+||++|+ T Consensus 159 ~~~~~~~~~-----~~y~~~~~~g~~~~~~~~dViHir~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~ 232 (431) T protein:vir:10 159 KGRLTSTWQ-----IVYDYTTPTGDKIELPAREVFHLRDL-SIDGVSGVSRVKLSGNALELAEQAERAASRTFRTGVMAG 232 (431) T ss_pred EEEEcCCCe-----EEEEEEeCCceEEEEchhhEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 998876532 23344556778889999999999965 567899999999999999999999999999999999999 Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc Q lcl|Aclame:pro 224 GLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL 303 (432) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~ 303 (432) |++++++.+++++.+++++.|.+.++|.+|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||++|+.. T Consensus 233 gil~~~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~ 312 (431) T protein:vir:10 233 GAIEVPKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMD 312 (431) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC----CcC Q lcl|Aclame:pro 304 SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG----FLK 379 (432) Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g----~~t 379 (432) +.++++|.+++.+.|+++||.||++.||++|++++|++.+. .+++++||++.|++.|.+++++.+.+++++| ||| T Consensus 313 ~~~t~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT 391 (431) T protein:vir:10 313 DTSWGSGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKML-GQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMK 391 (431) T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhc-CCceEEEechhhhccCHHHHHHHHHHHHhcccccCccC Confidence 88999999999999999999999999999999999986554 5789999999999999999999999998765 599 Q ss_pred HHHHHHHhCCCCCCC--cceeeeccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 380 PNEARSKEDLPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 380 ~nE~R~~~gl~p~~~--gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~ 428 (432) +||+|+++||||+++ ||++++|.|..+.+...+ ++..+ T Consensus 392 ~NE~R~~~gl~p~~~~~gD~~~~p~n~~~~~~~~~-----------~p~~~ 431 (431) T protein:vir:10 392 QNEVREMLDLPRADDPVADQLRNPMTQKQKGSGDE-----------PPATT 431 (431) T ss_pred HHHHHHHhCCCCCCCccccceecccccccCCCCCC-----------CCCCC Confidence 999999999999955 999999999876543222 11112 No 13 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=3.9e-97 Score=549.13 Aligned_cols=406 Identities=22% Similarity=0.382 Sum_probs=354.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) =|||++|+++|...++.......... +. .+. .+.+...|+.+.|+++++|++||++||++||++||++++.++++ T Consensus 14 ~g~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~-~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~~~ 88 (424) T protein:vir:18 14 NGWWARLQSWFVGGRLVTPNQGSQTG--PV--SAH-GHLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQND 88 (424) T ss_pred CchHHHHHhhhccccccccccccccc--cc--ccc-cccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeecCC Confidence 68999999998755543332222211 11 111 12344568999999999999999999999999999999988766 Q ss_pred cee--eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 81 IQR--GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 81 ~~~--~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) ... ..+||++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..++. . T Consensus 89 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~~~-------~ 161 (424) T protein:vir:18 89 NRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLVGK-------K 161 (424) T ss_pred ceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEcCC-------e Confidence 433 4589999999999999999999999999999999999999999999999999999999999877653 3 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAK 237 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~ 237 (432) ..|.+..+|+.+.|+++||||+|+++ .++.+|+||+..+...+.++.++++++.++|+||++|+++++++.. +++++. T Consensus 162 ~~y~~~~~g~~~~~~~~eIih~r~~~-~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~ 240 (424) T protein:vir:18 162 VVYRYQRDSEYADFSQKEIFHLKGFG-FTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQR 240 (424) T ss_pred EEEEEEeCCeEEEeccccEEEecCcC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHH Confidence 34566778888899999999999654 5789999999999999999999999999999999999999999875 699999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 315 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~ 315 (432) +++++.|++.++| .|+|++++|++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+++ +|.+++. T Consensus 241 ~~~~~~~~~~~~g-~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~ 319 (424) T protein:vir:18 241 SQVEENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQN 319 (424) T ss_pred HHHHHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHHH Confidence 9999999988876 688999999999999999999999999999999999999999999999998877664 8999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) ..|+++||.|+++.||++|+++|+++.+. .+++++||.+.+++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 320 ~~f~~~tl~P~~~~ie~~l~~~L~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gG 398 (424) T protein:vir:18 320 LGFLQYTLQPYISRWENSIQRWLIPAKDV-GRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPLPGG 398 (424) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Confidence 99999999999999999999999988775 57899999999999999999999999999999999999999999999999 Q ss_pred ceeeeccccccccccccccCCCCCCC Q lcl|Aclame:pro 396 DRLLVNGNMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 396 d~~~~~~n~~~~~~~~~~~~~gg~~~ 421 (432) |++++++|++|++..++...+..+.. T Consensus 399 D~~~~~~n~~~l~~~~~~~~p~~~ga 424 (424) T protein:vir:18 399 DVAMRQSQYVPITDLGTNKEPRNNGA 424 (424) T ss_pred CeeeeccCccchHhhhccCCCccCCC Confidence 99999999999986654322111111 No 14 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=4.2e-97 Score=548.98 Aligned_cols=419 Identities=23% Similarity=0.355 Sum_probs=352.5 Q ss_pred CchHHHHHHhcccccccccc-ccccCCchHHHHHh-hcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQ-VIELNKDDEKLLEW-LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||++++.+|......... ....+........+ ...+.+...|+.++|+++++|++||++||++||++|+++|++++ T Consensus 7 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:97 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMMYMRTP 86 (432) T ss_pred CchhhhhHhhcCCccccccccccccccCchhhhhhcccccccCcccchHhhhcchHHHHHHHHHHHhhccCceEEEEecC Confidence 99999999998654432111 11111111111111 22456677899999999999999999999999999999999999 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +|++...+||++++|+.+||++||+++||+.++.+++++||+|++++++ .|++.+|+|++|+.|++..+..+. . T Consensus 87 ~g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~~~g~-----~ 160 (432) T protein:vir:97 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGN-----T 160 (432) T ss_pred CCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEcCCCc-----E Confidence 9988889999999999999999999999999999999999999999997 589999999999999999876532 2 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) .|+....+|..+.|++++|||+|+ ++.++++|+||+..+...+.+..+++++..++|+||++|+|++++++.+++++++ T Consensus 161 ~y~~~~~~g~~~~~~~~~iih~r~-~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~ 239 (432) T protein:vir:97 161 AYRYRRTDGQMIDIPRQQIWKIMG-YSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYD 239 (432) T ss_pred EEEEEecCceEEEEccccEEEecC-cCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCHHHHH Confidence 233445678888999999999995 4668899999999999999999999999999999999999999999999999988 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc---ccHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL---NNIEQQQ 315 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~---~~~~~~~ 315 (432) +++++| .|..|+|++++|++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+++ ++.+++. T Consensus 240 ~~~~~~----~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~e~~~ 315 (432) T protein:vir:97 240 SFSKKV----SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQ 315 (432) T ss_pred HHHHHH----hhhhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhHHHHH Confidence 776655 466788999999999999999999999999999999999999999999999998766544 7899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.||++.||++|+++++.+.+. .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||++|| T Consensus 316 ~~f~~~tl~P~~~~ie~~ln~kLl~~~e~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~~g~ 394 (432) T protein:vir:97 316 LGFLTMTLSPWLRRIEQSIALNLLTPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGN 394 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988774 57899999999999999999999999999999999999999999999987 Q ss_pred cee-eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 DRL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d~~-~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |.+ .++.|++|++..+.+..+.. ..++++.+.+++. T Consensus 395 ~~~~~~~~~~~pl~~~~~~~~~~~-~~~~~~~~~~~~~ 431 (432) T protein:vir:97 395 AAVLTVQSAMVPLDSIGLQASPEP-ASGLGNQQQDKVS 431 (432) T ss_pred cceEeecccccchhhhcccCCCCC-CCCCCCccccccc Confidence 654 58999999887654322211 1111111111111 No 15 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=5.9e-97 Score=548.15 Aligned_cols=419 Identities=22% Similarity=0.348 Sum_probs=352.8 Q ss_pred CchHHHHHHhccccccccc-cccccCCchHHHHH-hhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTS-QVIELNKDDEKLLE-WLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||++++.+|........ .....+........ ....+.+...|+.+.||++++||+||++||++||++||++|++++ T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:10 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhHhhcCCccccccccccccccCcchhhhhcccccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEEEecC Confidence 9999999999865433211 11111111111111 123456677899999999999999999999999999999999999 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +|++...+||++++|+.+||++||+++||+.++.+++++||+|++++++ .|++.+|+|++|++|++..+..+. . T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~~~g~-----~ 160 (432) T protein:vir:10 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGN-----T 160 (432) T ss_pred CCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEcCCCc-----E Confidence 9988888999999999999999999999999999999999999999997 599999999999999999876542 2 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) .|+....+|..+.|++++|||+|++ +.++++|+||+..+.+.+.+..+++++..++|+||++|++++++++.+++++++ T Consensus 161 ~y~~~~~~g~~~~~~~~~iih~~~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~ 239 (432) T protein:vir:10 161 AYRYRRTDGQMIDIPKQQIWKIMGY-SLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYD 239 (432) T ss_pred EEEEEecCceEEEEcCccEEEecCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHH Confidence 3334456788889999999999954 678899999999999999999999999999999999999999999999999988 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccc---cccHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT---LNNIEQQQ 315 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~---~~~~~~~~ 315 (432) +++++|. |..|+|++++|++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++ ++|.+++. T Consensus 240 ~~~~~~~----~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e~~~ 315 (432) T protein:vir:10 240 SFAKKVS----GSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQ 315 (432) T ss_pred HHHHHHh----hhhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHHHHH Confidence 8777664 5578899999999999999999999999999999999999999999999999876544 48899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.|+++.||++|+++++.+.+. .+++++||.+.+++.|.+++++.+.+++++|+||+||+|+++||||++|| T Consensus 316 ~~f~~~tl~P~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~g~ 394 (432) T protein:vir:10 316 LGFLSMTLSPWLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGN 394 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988764 56899999999999999999999999999999999999999999999977 Q ss_pred ce-eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 DR-LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d~-~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +. +.++.|++|++..+.+..+. +..+++..+.+++. T Consensus 395 ~~~~~~~~~~~pl~~~~~~~~~~-~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 395 AAVLTVQSAMVPLDSIGLQASPE-PASGLGNQQQDKVS 431 (432) T ss_pred cceEeecCcccchhhhcccCCCC-CCCCCCCccccccc Confidence 64 55899999988765432221 11111111111111 No 16 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=9.2e-97 Score=547.08 Aligned_cols=409 Identities=29% Similarity=0.438 Sum_probs=353.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh--cCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL--GISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) |.+++++++ ++++. .....|. .+.... +.+.+...|+.+.|+++++||+||++||++||++||+++++++ T Consensus 1 m~~~~~~~~----~~~~~---s~~~~w~-~~~~~~~~~~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~ 72 (421) T protein:vir:10 1 MFIPQMFEG----KKRSV---SGGGFWE-AMLGGVRSSHSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDK 72 (421) T ss_pred CCCcchhcc----ccccc---CcchhhH-HHhhhhccCcccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcC Confidence 888776632 12211 1112222 222222 2344567899999999999999999999999999999999887 Q ss_pred Ccc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 79 YGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 79 ~~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) +|. +...+|+++++|+.+||++||+++||+.++.+++++||+|++++++..|++.+|||++|..|++..+.++ T Consensus 73 ~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~g------ 146 (421) T protein:vir:10 73 NGGRQRATDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGPDG------ 146 (421) T ss_pred CCceeecccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECCCc------ Confidence 664 4567899999999999999999999999999999999999999999999999999999999999887653 Q ss_pred eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC----C Q lcl|Aclame:pro 158 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----N 233 (432) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~ 233 (432) ..+|.+...| ..+++++|||++++ +.++++|.||+..+..++.+..++++++.++|+||++|+|+++.+... + T Consensus 147 ~~~y~~~~~g--~~~~~~eiih~~~~-~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~ 223 (421) T protein:vir:10 147 MPYYEIPEIG--ETLPMRMMHHVKVF-SLDGYIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKS 223 (421) T ss_pred eEEEEEcCCC--cEEchhhEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCC Confidence 2344444444 36899999999964 578899999999999999999999999999999999999999998755 8 Q ss_pred HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 234 EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 234 ~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) +++.+++++.|++.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.++ T Consensus 224 ~e~~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~ 303 (421) T protein:vir:10 224 QEKIDQLLAKWTDRYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEH 303 (421) T ss_pred HHHHHHHHHHHHHHhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) +.+.|+++||.|++.+||++|+++++++.+. .+++++||.+.+++.|.+++++.+.+++++|+||+||+|+++|+||+| T Consensus 304 ~~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~-~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ 382 (421) T protein:vir:10 304 QGLQFVMYTLLAWLKRHEGALQRDLLLPSER-RDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIA 382 (421) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999988774 588999999999999999999999999999999999999999999999 Q ss_pred CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 394 ~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |||++++|+|+++++... .++.....++.+.+|+ T Consensus 383 ggD~~~~~~n~~~~~~~~-----~~~~~~~~~~~~e~d~ 416 (421) T protein:vir:10 383 GGDKYLTPLNMVDSAQII-----PGDKKPTAQQMAEIDT 416 (421) T ss_pred Ccceeeeccccccccccc-----cCCCCcccccCccccc Confidence 999999999998776442 1222233333333344 No 17 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=1.1e-96 Score=546.56 Aligned_cols=419 Identities=23% Similarity=0.348 Sum_probs=352.0 Q ss_pred CchHHHHHHhccccccc-cccccccCCchHHHH-HhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQ-TSQVIELNKDDEKLL-EWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||+|++.+|...... .......+....... .....+.+...|+.+.|+++++|++||++||++||++|+++|++++ T Consensus 7 mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:81 7 LGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhhhhcccccccccccccccccCccchhhhcccccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeEEecC Confidence 99999999887643321 111111111111111 1223456677899999999999999999999999999999999999 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +|++...+||++++|+.+||++||+++||+.++.+++++||+|+++.++ .|++.+|+|++|..|++..+..+. . T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v~~~~~g~-----~ 160 (432) T protein:vir:81 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDPKGN-----T 160 (432) T ss_pred CcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEECCCCc-----E Confidence 9988888999999999999999999999999999999999999999986 589999999999999999876542 2 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) .|+.+..+|..+.|++++|||+|+ .+.++++|+||+..+...+....+++++..++|+||++|+++++++..+++++++ T Consensus 161 ~y~~~~~~g~~~~~~~~~iih~r~-~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~ 239 (432) T protein:vir:81 161 AYRYRRTDGQMIDIPKQQIWKIMG-YSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYD 239 (432) T ss_pred EEEEEecCceEEEEccccEEEecC-CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHH Confidence 233445678888999999999995 4677899999999999999999999999999999999999999999999999988 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc---ccHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL---NNIEQQQ 315 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~---~~~~~~~ 315 (432) +++++|. |..|+|++++|++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+++ ++.||+. T Consensus 240 ~~~~~~~----~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~eq~~ 315 (432) T protein:vir:81 240 SFAKKVS----GSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQ 315 (432) T ss_pred HHHHHHh----hhhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHHHHH Confidence 8877664 55788999999999999999999999999999999999999999999999998776544 7899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.||++.||++|+++|+.+.+. .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||++|| T Consensus 316 ~~f~~~tl~P~~~~ie~~l~~kLl~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~g~ 394 (432) T protein:vir:81 316 LGFLTMTLSPWLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGN 394 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCC Confidence 99999999999999999999999988774 57899999999999999999999999999999999999999999999976 Q ss_pred c-eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 D-RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d-~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) + .+++++|++|++..+++..+. +..++..++.++.. T Consensus 395 ~~~~~~~~~~~pl~~~~~~~~~~-~~~~~~n~~~~~~~ 431 (432) T protein:vir:81 395 AAVLTVQSAMVPLDSIGLQASPE-PASGLGNQQQDKVS 431 (432) T ss_pred cceEeecCcccchhhhccCCCCC-CCCCCCCccccccc Confidence 5 456899999988765433221 11111111111111 No 18 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=1.7e-96 Score=545.58 Aligned_cols=414 Identities=29% Similarity=0.497 Sum_probs=359.3 Q ss_pred chHHHHHHhccccccccccccccCCchHHHHHhhcCC--cCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 2 KIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS--PSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 2 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) =||++ +|.. +... ..........+..++|.. .+...|+...++++|+|++||++||++||++|+++++.+++ T Consensus 1 m~~~~---~f~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~ 74 (416) T protein:vir:12 1 MLLER---MFEK--RSGS-SDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) T ss_pred Cccch---hccc--ccCc-cccCccchhHHHHhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCC Confidence 13333 3322 2111 122223344566677643 44567889999999999999999999999999999999998 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) +.+...+|+++++|+.+||++||+++||+.++.+++++||+|+++.++..|.+.+|+|++|.+|++..+.. .... T Consensus 75 ~~~~~~~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~-----~~~~ 149 (416) T protein:vir:12 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT-----TGML 149 (416) T ss_pred ccccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCC-----CcEE Confidence 98888899999999999999999999999999999999999999999999999999999999999987664 2345 Q ss_pred EEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) Q Consensus 160 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 239 (432) +|.+..+|..+.+++++|||+|++ +.++.+|.||+.++..++.+..+++++..++|+||+.|+++++++..+++++.++ T Consensus 150 ~~~~~~~g~~~~~~~~eiih~~~~-~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~ 228 (416) T protein:vir:12 150 WYQTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKEN 228 (416) T ss_pred EEEEecCCeEEEecCccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHHHHHH Confidence 667777888899999999999965 5678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) Q Consensus 240 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~ 319 (432) ++++|+... ++++++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++.+.|+ T Consensus 229 ~~~~~~~~~----~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~ 304 (416) T protein:vir:12 229 VRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYV 304 (416) T ss_pred HHHHHHHHh----cCCCeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHH Confidence 999998653 5688999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 399 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~ 399 (432) ++||.|++++|+++|+++++++.+...|++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||+++ T Consensus 305 ~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi~ggd~~~ 384 (416) T protein:vir:12 305 RNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYI 384 (416) T ss_pred HHHHHHHHHHHHHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999 Q ss_pred eccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 VNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 400 ~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) +|+|++|++..+++.........+.-++.+|| T Consensus 385 ~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~g 416 (416) T protein:vir:12 385 SSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) T ss_pred eccccccccccchhhccccccccCCCCCcCCC Confidence 99999999877654332111111111122222 No 19 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=1.4e-96 Score=546.16 Aligned_cols=406 Identities=23% Similarity=0.390 Sum_probs=352.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) =|||++|+++|...+........... + ..+ ..+.....|+.+.|+++++|++||++||++||++|+++|+.++++ T Consensus 14 ~g~~~~~~~~f~~~~~~~~~~~~~~~--~--~~~-~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~~ 88 (424) T protein:vir:18 14 NGWWARLKSWFVGGRLVTPNQGSQTG--P--VSA-HGYLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQND 88 (424) T ss_pred CchHHHHHhhccccccccccchhhcc--c--ccc-ccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccCC Confidence 68999999998654433222111111 1 011 112234468999999999999999999999999999999988766 Q ss_pred ce--eeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 81 IQ--RGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 81 ~~--~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) .. ...+||++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|.+|++..++. . T Consensus 89 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~-------~ 161 (424) T protein:vir:18 89 NRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLVGK-------K 161 (424) T ss_pred ceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEcCC-------e Confidence 43 34689999999999999999999999999999999999999999999999999999999999877653 3 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAK 237 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~ 237 (432) .+|.+..+|....|+++||||+|++ ..++.+|+||+..+...+.++.++++++.++|+||++|+|+++++.. .++++. T Consensus 162 ~~y~~~~~g~~~~~~~~eVihir~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~ 240 (424) T protein:vir:18 162 VVYRYQRDSEYADFSQKEIFHLKGF-GFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQR 240 (424) T ss_pred EEEEEEeCCeEEEeccccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHH Confidence 3456677888889999999999965 46789999999999999999999999999999999999999999876 699999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ 315 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~ 315 (432) +++++.|++.++| .|+|+++||++|++|+++++++.|+|++|++++++++||++|||||++||..+.+++ ++.+++. T Consensus 241 ~~~~~~~~~~~~~-~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~ 319 (424) T protein:vir:18 241 SQVEENFKEIAGG-PVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQN 319 (424) T ss_pred HHHHHHHHHHhCC-cccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHH Confidence 9999999987766 688999999999999999999999999999999999999999999999998877665 8899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) ..|+++||.|++++||++|+++++++.+. .+++++||++.|++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 320 ~~f~~~tl~P~~~~ie~~ln~~L~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gg 398 (424) T protein:vir:18 320 LGFLQYTLQPYISRWENSIQRWLIPSKDV-GRLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLPGG 398 (424) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Confidence 99999999999999999999999988776 47899999999999999999999999999999999999999999999999 Q ss_pred ceeeeccccccccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGN 429 (432) Q Consensus 396 d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~ 429 (432) |++++++|++|++..++...+. +++- T Consensus 399 D~~~~~~n~~~l~~~~~~~~~~--------~n~a 424 (424) T protein:vir:18 399 DVAMRQAQYVPITDLGTNKEPR--------NNGA 424 (424) T ss_pred CeeeeccCccchhhhhccCCcc--------ccCC Confidence 9999999999998665432211 1111 No 20 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=1.8e-96 Score=545.49 Aligned_cols=422 Identities=21% Similarity=0.344 Sum_probs=355.2 Q ss_pred hHHHHHHhccccccccccccccCCchHHH---H-HhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 3 IVDSVKKFFNFEKRQTSQVIELNKDDEKL---L-EWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) |||.|++.- +............+...+ . .+.|.+.+...|+.+.||++++|++||++||++||++||++|+.++ T Consensus 1 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~ 78 (454) T protein:vir:93 1 MWNLLRRTR--KNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDA 78 (454) T ss_pred CCCccccCc--ccccccccccchhhhhhhhhhhhhhcchhhcCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecc Confidence 777665421 111222222223333221 2 2446677888999999999999999999999999999999999998 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +|......++.+++|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+.++...+... T Consensus 79 ~g~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~y~~~ 158 (454) T protein:vir:93 79 QGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDGEVFYRIT 158 (454) T ss_pred CCccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCCcEEEEEE Confidence 88777666776777788999999999999999999999999999999999999999999999999999887643322111 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) . ......+....++++||||+|++.+.++.+|+||+..+...+.+..+++++..++|+||++|+|++++++.+++++.+ T Consensus 159 ~-~~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~ 237 (454) T protein:vir:93 159 P-DRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAK 237 (454) T ss_pred e-ccccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHHHH Confidence 1 011122346679999999999888889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~ 318 (432) ++++.|++.++| .|+|+++|+++|++|+++++++.|+|++|++++.+++||++|||||.+||..++++++|.+++.+.| T Consensus 238 ~~~~~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f 316 (454) T protein:vir:93 238 KLKSNWDSGYTG-ENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQY 316 (454) T ss_pred HHHHHHHHHhcc-cccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHHHH Confidence 999999999988 6899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee Q lcl|Aclame:pro 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 398 (432) Q Consensus 319 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~ 398 (432) +++||.|+++.|+++|+++++... +.+++||++.|++.|.+++++.+.+++++|+||+||+|+++|+||+||||++ T Consensus 317 ~~~~l~P~~~~ie~~ln~~L~~~~----~~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~ 392 (454) T protein:vir:93 317 YSQCLQTLIESIELLLDEALETGE----NESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDAL 392 (454) T ss_pred HHHHHHHHHHHHHHHHHHhhcCCC----CcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCee Confidence 999999999999999999988653 5689999999999999999999999999999999999999999999999999 Q ss_pred eeccccccccccccccCCC------CCCCCC-CCCCCCCCC Q lcl|Aclame:pro 399 LVNGNMLPIDMAGQAYLKG------GDTNGE-VSKEGNEGN 432 (432) Q Consensus 399 ~~~~n~~~~~~~~~~~~~g------g~~~~~-~~~~~~e~~ 432 (432) +++.|+.|++..++.+... +....+ .+.+++++| T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 433 (454) T protein:vir:93 393 YLQQQNYSLEALSRRDAREDPFASSGKTASVPQAVAASDGN 433 (454) T ss_pred eeccCccchHhhhccCcccCCCCCCccCCCCCCCCCCCCCC Confidence 9999998887655433211 111111 112222333 No 21 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=5.2e-96 Score=542.98 Aligned_cols=410 Identities=29% Similarity=0.480 Sum_probs=354.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc---CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG---ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) |-|..+|++ ++.. ..... ..+..++| .+.+...|+.+.|+++++|++||++||++||++|+++++.+ T Consensus 1 ~~f~~~f~r------~~~~-~~~~~---~~~~~~~~~~~~~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~ 70 (413) T protein:vir:48 1 MFFSGLFQR------KSDA-PVTTP---AELAEAIGLSYDTYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKIS 70 (413) T ss_pred Cccchhhcc------CccC-Cccch---HHHHHhhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEec Confidence 554433321 1111 11111 12333333 34456678999999999999999999999999999999999 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) +++++...+|+++++|+.+||++|++++||+.++.+++++||+|++++++ .|++.+|+|++|++|++..+.... T Consensus 71 ~~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~----- 144 (413) T protein:vir:48 71 GTLKTRVVDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLNSQWQ----- 144 (413) T ss_pred CCcceeecccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEcCCce----- Confidence 98888888999999999999999999999999999999999999999886 689999999999999998876532 Q ss_pred eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 158 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) ..|+....+|....|++++|||+|++ +.++++|.||+..+..++....++++++.++|+||++|+|+++++..+++++. T Consensus 145 ~~y~~~~~~g~~~~~~~~evih~~~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~ 223 (413) T protein:vir:48 145 PVYQVTFPDGSVDVLTQDEIWHVRTL-TLDGLVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAY 223 (413) T ss_pred EEEEEEecCceEEEEccccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Confidence 23344556777888999999999965 45779999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~ 317 (432) +++++.|++.++|..|+|+++++++|++|++++.++.|+|++|.+++.+++||++|||||.+|+..+.++++|.+++... T Consensus 224 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~ 303 (413) T protein:vir:48 224 ERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLG 303 (413) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) |++.||.|++++|+++|+++++++.+. .+++++||++.|++.|.+++++.+.+++++|++|+||+|+++|+||+||||+ T Consensus 304 f~~~~i~P~~~~ie~~l~~~L~~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~ggD~ 382 (413) T protein:vir:48 304 FINYSLVPYLTRIEQRINTGLVRESKQ-GKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDV 382 (413) T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Confidence 999999999999999999999988775 5889999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~ 428 (432) +++|+|+++++..++...+.++..++.+..+ T Consensus 383 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (413) T protein:vir:48 383 YLTPMNMTTSPSAGDDNGKKKESGDADKTAS 413 (413) T ss_pred eeccccccccccccccCCCCCCCCCccccCC Confidence 9999999988765443322222111111111 No 22 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=2e-95 Score=539.72 Aligned_cols=417 Identities=28% Similarity=0.409 Sum_probs=353.7 Q ss_pred hHHHHHHhcccccccccc------ccccCCch-HHHHHhhcC-CcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 3 IVDSVKKFFNFEKRQTSQ------VIELNKDD-EKLLEWLGI-SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIY 74 (432) Q Consensus 3 ~~~~l~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~g~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 74 (432) |++.|.+.....+..... ....+..+ ..+..|+|. +.+...|+.+.||++++|++||++||++||++||++| T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~ 80 (434) T protein:vir:43 1 MSKSLGKVLSSATSAPRSSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVY 80 (434) T ss_pred CccchhhhhhhcccccchhhhcccccccccCchHHHHHHhcCCccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEE Confidence 445554443322211111 12222223 334445554 3466789999999999999999999999999999999 Q ss_pred eecCCc-ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccce Q lcl|Aclame:pro 75 QEDEYG-IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 153 (432) Q Consensus 75 ~~~~~~-~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~ 153 (432) +++.+| ++...+|+++++|+.+||++||+++||+.++.+++++||+|+++.++ .|++.+|+|++|.+|++..+.++. T Consensus 81 ~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v~~~~~~~g~- 158 (434) T protein:vir:43 81 ERKADGSRVDARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRVDLECDENGR- 158 (434) T ss_pred EEcCCCccccccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEcCCCe- Confidence 988766 45567899999999999999999999999999999999999998776 699999999999999999877533 Q ss_pred eccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC Q lcl|Aclame:pro 154 NSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN 233 (432) Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 233 (432) ..|+.+..+|..+.|++++|||+|++ +.++.+|+||+..+...+.+..++++++.++|+||++|+|+++++..++ T Consensus 159 ----~~y~~~~~~g~~~~~~~~eVih~~~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~ 233 (434) T protein:vir:43 159 ----LKYFYTTKKGARREIERTNMLHIPAF-TLDGRIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQ 233 (434) T ss_pred ----EEEEEEecCceEEEEccccEEEecCc-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCC Confidence 33455667788899999999999965 6788999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccc--cccH Q lcl|Aclame:pro 234 EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT--LNNI 311 (432) Q Consensus 234 ~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~--~~~~ 311 (432) +++.+++++.|++ +.|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++ +++. T Consensus 234 ~e~~~~~r~~~~~-~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~ 312 (434) T protein:vir:43 234 PAQREEFREYVKS-VSGAMNSGRSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGL 312 (434) T ss_pred HHHHHHHHHHHHH-hcCccccCCccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchH Confidence 9999999999975 567789999999999999999999999999999999999999999999999999876554 7899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 391 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p 391 (432) +++...|+++||.|++.+||++|+++++++.+. .+++++||.+.+++.|.+++++.+.+++++|++|+||+|+++|+|| T Consensus 313 e~~~~~f~~~~L~P~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p 391 (434) T protein:vir:43 313 EQQMLAFLTFSISSITNQIQQCVNKRLLTAPER-IRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPE 391 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhh-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Confidence 999999999999999999999999999988774 4689999999999999999999999999999999999999999999 Q ss_pred CCCcceeeeccccccccccccccCCCCC----CC--CCCCCCC Q lcl|Aclame:pro 392 EAGGDRLLVNGNMLPIDMAGQAYLKGGD----TN--GEVSKEG 428 (432) Q Consensus 392 ~~~gd~~~~~~n~~~~~~~~~~~~~gg~----~~--~~~~~~~ 428 (432) +||||++++++|++|++..++.+..... .+ ++++-+. T Consensus 392 ~~ggD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (434) T protein:vir:43 392 LPGGDILTVQSNLVPIDQLGQSNKSQAVRAALMNWFSQPEPQE 434 (434) T ss_pred CCCCCeEeeccCccchhhhhccCCCcchhhhhhccCCCCCCCC Confidence 9999999999999999877654433211 11 1111111 No 23 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=2.8e-95 Score=538.97 Aligned_cols=419 Identities=27% Similarity=0.418 Sum_probs=354.5 Q ss_pred Cc-----hHHHHHHhccccccccccccccCCchHHHHHhhcC--CcCcccccHHHHhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MK-----IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) |+ +|++++..+. .....+.+..+..+.++++. +.+...|+.+.|+++++|++||++||++||++||++ T Consensus 1 ~~~~~~~~~~~~~~~~~-----~~~g~~~s~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~ 75 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFL-----KWLGVPISLTDGSFWSAWGGMGSSSGETVTADSALQLSAVWSCVRLIAETIATLPLNL 75 (437) T ss_pred CCcchhhhhhhhHHhhh-----hhcCCcccCCchhHHHhhcccccCCCceechHhhhccHHHHHHHHHHHHHHhhCceeE Confidence 77 4444433221 01111233334444454442 445567899999999999999999999999999999 Q ss_pred EeecCCcc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 74 YQEDEYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 74 ~~~~~~~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) ++.+++|. +...+|+++++|+.+||++|++++||+.++.+++++||+|++++++ .|++.+|+|++|..|++..+..+. T Consensus 76 ~~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~g~~~~L~~l~p~~v~i~~~~~g~ 154 (437) T protein:vir:10 76 YQTKPDGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRS-AGVLIGLELMLPQRTTVKRLTSGA 154 (437) T ss_pred EEEcCCCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEECCCCe Confidence 99888775 4557899999999999999999999999999999999999999998 599999999999999998876432 Q ss_pred eeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL 232 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 232 (432) ..|+....+|....|+++||||+|++ ..++++|+||+..+..++.+..+++++..++|+||++|+|+++.+..+ T Consensus 155 -----~~y~~~~~~g~~~~~~~~dIih~r~~-~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l 228 (437) T protein:vir:10 155 -----LQYTYRNVDGTVSTLAEDDVFHVRGF-SLDGLMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQIL 228 (437) T ss_pred -----EEEEEEecCceEEEEccccEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCC Confidence 22334456778889999999999965 468899999999999999999999999999999999999999999999 Q ss_pred CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--cc Q lcl|Aclame:pro 233 NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NN 310 (432) Q Consensus 233 ~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~ 310 (432) ++++.+++++.|.++++|..|+|+++|+++|++|+++++++.|+|++|++++++++||++|||||.+||..+.+++ +| T Consensus 229 ~~e~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn 308 (437) T protein:vir:10 229 QKEKRAEIRTDLAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTG 308 (437) T ss_pred CHHHHHHHHHHHHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccch Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877654 88 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Q lcl|Aclame:pro 311 IEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLP 390 (432) Q Consensus 311 ~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~ 390 (432) .+++.+.|++.||.|++..|+++|++++|++.+.. +++++||++.+++.|.+++++++.+++++|++|+||+|+++|+| T Consensus 309 ~e~~~~~f~~~tl~P~~~~ie~~l~~kll~~~e~~-~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~ 387 (437) T protein:vir:10 309 IEQQTLGFLTFTLRPWLTRIEQAARRSLLRPGERD-QFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLP 387 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccC-ceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Confidence 99999999999999999999999999999887654 57899999999999999999999999999999999999999999 Q ss_pred CCCCccee-eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 391 PEAGGDRL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 391 p~~~gd~~-~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+||||.+ ++++|++|++..+++....+..+.....+.++.+ T Consensus 388 pi~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (437) T protein:vir:10 388 PMGGNAAVLTVQSALLPIDKLGEHTTATAAQDALKAWLYQEEK 430 (437) T ss_pred CCCCCcceEeecCcccchhhccCcCCCcchhccccccCCCCCC Confidence 99987764 5789999988776654443322211111111111 No 24 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=4.5e-95 Score=537.82 Aligned_cols=413 Identities=26% Similarity=0.386 Sum_probs=350.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-cCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) |+|++++++.- . .....+......+. +.+.+...|+.+.||++++|++||++||++||++|+++++.+++ T Consensus 1 m~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~ 71 (419) T protein:vir:57 1 MFIPQFWKGRP-------S--ENRVNWQVVPGGMRSSSSQAGVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTEN 71 (419) T ss_pred CcchhhhccCC-------c--cccccccccccccccccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCC Confidence 99998775421 1 11111111111222 34556678999999999999999999999999999999998877 Q ss_pred cc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 80 GI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 80 ~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) |. +...+|+++++|+.+||++|++++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..+.++. T Consensus 72 g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g~------ 145 (419) T protein:vir:57 72 GGREIAFDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDGM------ 145 (419) T ss_pred CceeccccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCce------ Confidence 75 44578999999999999999999999999999999999999999999999999999999999998876532 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC----CCCH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG----DLNE 234 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~----~~~~ 234 (432) .+|.+...+ ..++.++|||+|++ +.++.+|.||+..+...+....++++++.++|+||++|+|+++.+. ..++ T Consensus 146 ~~y~~~~~~--~~~~~~~vih~r~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~ 222 (419) T protein:vir:57 146 PYYDIPSIG--EILPMRMVHHIKSF-SLDGYIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQ 222 (419) T ss_pred EEEEEcCCc--eEEchhhEEEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCH Confidence 344444444 56899999999965 5778999999999999999999999999999999999999999864 3578 Q ss_pred HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) ++.+++++.|.+.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++ T Consensus 223 e~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~ 302 (419) T protein:vir:57 223 AAVDAILAKWTERYGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQ 302 (419) T ss_pred HHHHHHHHHHHHHhccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) .+.|+++||+|+++.|+++|++++|.+.+. .+++++||++.+++.|.+++++.+.+++++|+||+||+|+++|+||+|| T Consensus 303 ~~~f~~~~l~P~~~~ie~~l~~~ll~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~g 381 (419) T protein:vir:57 303 GLQYVIYTMLAILKRHESAMMRDLLLPSER-RDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPIPG 381 (419) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 999999999999999999999999988765 5899999999999999999999999999999999999999999999999 Q ss_pred cceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ||++++|+|+++.+.+........+...+.+...-.-| T Consensus 382 gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (419) T protein:vir:57 382 GDKYLTPLNMVDSKALTGIGKATPQQLKDIEAILCTRN 419 (419) T ss_pred cCeeeeccccccccccccccCCCcccCcchhhhhhccC Confidence 99999999998876543321111111111111111111 No 25 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=8.4e-95 Score=536.33 Aligned_cols=408 Identities=26% Similarity=0.419 Sum_probs=349.7 Q ss_pred chHHHHHHhccccccccccccccCCchHHHHHhhcC--CcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 2 KIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 2 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) =||+|. ..........+ ....+..++|. +.+...||.+.||++++|++||++||++||++|+++++++++ T Consensus 1 ~~~~r~-------~~~~~~~~~~~-~~~~~~~~~g~~~s~~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~ 72 (419) T protein:vir:14 1 MFFSRQ-------LLSNLGQTQMS-AGGWVSALLGSSRSDSGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGE 72 (419) T ss_pred Cccccc-------ccccccccccC-cchhhHHhhcCCCccCCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCC Confidence 122221 11111111122 22344455543 455678999999999999999999999999999999999999 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) +++...+|+++++|+.+||++||+++||+.++.+++++||+|+++.++..|++.+|+|++|.+|++..+.++. . T Consensus 73 ~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~~------~ 146 (419) T protein:vir:14 73 DRKPATDHPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDLK------P 146 (419) T ss_pred ccccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCce------E Confidence 9888899999999999999999999999999999999999999999999999999999999999998876532 2 Q ss_pred EEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC----CHH Q lcl|Aclame:pro 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----NED 235 (432) Q Consensus 160 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~ 235 (432) +|.+... ..++.++|+|++++ +.++++|.||+..+...+....++++++.++|+||++|+|+++.+... +++ T Consensus 147 ~y~~~~~---~~~~~~~i~h~~~~-~~dg~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~ 222 (419) T protein:vir:14 147 VYRVRGS---DPMPQRLVHHVRWM-SINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQA 222 (419) T ss_pred EEEEccC---cccchhheeEecCc-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHH Confidence 3333322 24789999999954 568899999999999999999999999999999999999999998765 588 Q ss_pred HHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 315 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~ 315 (432) +.+++++.|++.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.+++++.|++. T Consensus 223 ~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~ 302 (419) T protein:vir:14 223 SVDRITDGWNAKFGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQS 302 (419) T ss_pred HHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) +.|+++||.|++++|+++|++++|++.+. .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||+||| T Consensus 303 ~~f~~~~L~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gG 381 (419) T protein:vir:14 303 LQFVIYTLLPWVKRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGG 381 (419) T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Confidence 99999999999999999999999988775 57899999999999999999999999999999999999999999999999 Q ss_pred ceeeeccccccccccccccCCCCCCCCCCCCC-CCCCC Q lcl|Aclame:pro 396 DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKE-GNEGN 432 (432) Q Consensus 396 d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~-~~e~~ 432 (432) |++++|+|+++++.+++.+. + ..++++. .+|.. T Consensus 382 D~~~~~~n~~~~~~~~~~~~--~--~~~~~~~~~~e~~ 415 (419) T protein:vir:14 382 DIYLSPMNMVDASKPQQLPV--G--KSEPTKAAIDEIG 415 (419) T ss_pred CeeeeccccccccccccccC--C--CCCCccccccchh Confidence 99999999998775543211 1 1122222 22222 No 26 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=1.8e-93 Score=529.09 Aligned_cols=404 Identities=26% Similarity=0.405 Sum_probs=348.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |+||.|+|+.+-..- ..+..... . .+..|.+. +...++.+.|+++++|++||++||++||++|++++++++ T Consensus 4 ~~~~~~~k~~~~~~~--~~~~~~~~-~--~~~~~~~~--~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~-- 74 (409) T protein:vir:96 4 ENIVTRIKKKLIDNW--IDQSASKL-Y--DFSPWKNK--SFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK-- 74 (409) T ss_pred ccchhhhhhHHhhhh--hccccccc-c--ccccccCc--cccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeeccc-- Confidence 999999988642111 11111100 0 11233333 445678889999999999999999999999999998654 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..+|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|..|++..++... ...| T Consensus 75 ---~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~----~~~y 147 (409) T protein:vir:96 75 ---VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR----ELYY 147 (409) T ss_pred ---ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc----EEEE Confidence 346999999999999999999999999999999999999999999999999999999999998876532 2233 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) ..+..+|....|+++||||+|++++.++++|.||+..+...+.+..+++++. ++.++..+++++..+..+++++++++ T Consensus 148 ~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~ 225 (409) T protein:vir:96 148 SIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQV 225 (409) T ss_pred EEEcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHH Confidence 4445667788999999999998888999999999999999999999988875 44445555678888899999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) +++|.+.++ |+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||+.+.+++++.+++.+.|++ T Consensus 226 ~~~~~~~~~---n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~ 302 (409) T protein:vir:96 226 LEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQ 302 (409) T ss_pred HHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 999999875 56889999999999999999999999999999999999999999999999988999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) +||.|+++.|+++|++++|++.++..+++++||.+.+++.|.+++++++.+++++|++|+||+|+++|+||+||||++++ T Consensus 303 ~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi~ggD~~~~ 382 (409) T protein:vir:96 303 HTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLI 382 (409) T ss_pred HHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeee Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQA--YLKGGDTNGEVS 425 (432) Q Consensus 401 ~~n~~~~~~~~~~--~~~gg~~~~~~~ 425 (432) ++|++|++...+. ..+||++++++. T Consensus 383 ~~n~~~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:96 383 SGDLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred cccccccccchhhcccccCCCCCcCCC Confidence 9999999866543 456666655544 No 27 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=8.6e-94 Score=530.79 Aligned_cols=409 Identities=26% Similarity=0.427 Sum_probs=349.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc--CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) |-|..+. ++...+.. +....++..++| .+.+...|+.++||++++|++||++||++||++|++++++++ T Consensus 1 m~~~~~~-------~~~~~~~~--~~~~~~~~~~~g~~~s~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~ 71 (419) T protein:vir:80 1 MFFSRQL-------LSNLGQTQ--PGSGGWVSALLGSARSEAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSG 71 (419) T ss_pred CCccccc-------ccccCcCC--CCcchhhHHhhcccccccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 5443221 11111111 222334445554 344567899999999999999999999999999999999999 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) ++++...+|+++++|+.+||++|++++||+.++.+++++||+|++++|+..|++.+|+|++|.+|++..+.++. T Consensus 72 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~------ 145 (419) T protein:vir:80 72 DDRKPATDHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLK------ 145 (419) T ss_pred CCcccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCce------ Confidence 99888889999999999999999999999999999999999999999999999999999999999998877532 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC----CH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL----NE 234 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~ 234 (432) ..|.+.. ...++.++|+|+++ ++.++++|.||+..+...+....+++++..++|+||+.|+|+++.+... ++ T Consensus 146 ~~y~~~~---~~~~~~~~i~h~~~-~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~ 221 (419) T protein:vir:80 146 PMYRVAG---ADPLPQRLVHHVRW-MSINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQ 221 (419) T ss_pred EEEEEcC---ccccchhheEEecC-CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCH Confidence 2233322 13589999999995 4668899999999999999999999999999999999999999987644 68 Q ss_pred HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) ++.+++++.|++.++|..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..+.++++|.+++ T Consensus 222 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~ 301 (419) T protein:vir:80 222 ASVDRITDGWNAKFGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQ 301 (419) T ss_pred HHHHHHHHHHHHHhcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHH Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) .+.|+++||.|+++.|+++|++++|.+.+. .+++++||.+.|++.|.+++++.+++++++|++|+||+|+++|+||+|| T Consensus 302 ~~~f~~~~l~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~g 380 (419) T protein:vir:80 302 SLQFVIYTLLPWVKRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKG 380 (419) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 999999999999999999999999988764 5789999999999999999999999999999999999999999999999 Q ss_pred cceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ||++++|+|+++++.+.. .++|+.+... +..+|-+ T Consensus 381 GD~~~~~~n~~~~~~~~~--~~~~~~~~~~-~~~~~~~ 415 (419) T protein:vir:80 381 GDIYLSPMNMVDASKPQP--IPMGKTEPTK-AALDEIG 415 (419) T ss_pred cceeeecccccccccccc--ccCCCCCchh-hhHHHHH Confidence 999999999987765432 2222222111 1112222 No 28 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=1.4e-93 Score=529.65 Aligned_cols=407 Identities=25% Similarity=0.415 Sum_probs=346.5 Q ss_pred CchHHH--HHHhcccccccccccc-ccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDS--VKKFFNFEKRQTSQVI-ELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~--l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) |+||.+ +..... +....... ........+..|.+ .+...++.+.|+++|+|++||++||++||++||++++++ T Consensus 1 m~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~ 76 (412) T protein:vir:26 1 MNVIAKENIVTRIK--KKLIDNWIDQSTSKLYDFSPWKN--RSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDY 76 (412) T ss_pred Cccchhhhhhhhhh--hhHhhhhhcccccccccccccCC--ccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeecc Confidence 999954 221110 00000000 00000011223332 244567889999999999999999999999999999865 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) + ..+|+++++|+.+||++|++++||+.++.+++++||+|++++|+..|.+.+|+|++|..|++..+.+.. . T Consensus 77 ~-----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~----~ 147 (412) T protein:vir:26 77 K-----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR----E 147 (412) T ss_pred c-----cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc----E Confidence 4 346999999999999999999999999999999999999999999999999999999999998876532 2 Q ss_pred eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 158 KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) ..|.....+|....|+++||||+|++++.++++|+||+.++...+.+..+++++. ++.++..++++++.+..+++++. T Consensus 148 ~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~ 225 (412) T protein:vir:26 148 LYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKR 225 (412) T ss_pred EEEEEEcCCceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHH Confidence 2334445667778899999999998888899999999999999999999998885 55566667788899999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~ 317 (432) ++++++|++.+. ++|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|++.+.+++++.+++.+. T Consensus 226 ~~~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~ 302 (412) T protein:vir:26 226 QQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRF 302 (412) T ss_pred HHHHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHH Confidence 999999998765 56889999999999999999999999999999999999999999999999888999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) |+++||.|++++|+++|++++|++.++..+++++||.+.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||+ T Consensus 303 f~~~~l~P~~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~ 382 (412) T protein:vir:26 303 YLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDK 382 (412) T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCe Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQA--YLKGGDTNGEVS 425 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~--~~~gg~~~~~~~ 425 (432) +++++|++|++.+.+. ..+||+++++++ T Consensus 383 ~~~~~n~~~~~~~~~~~~~~~gG~~n~~e~ 412 (412) T protein:vir:26 383 PLISGDLYPIDTPLELRKSLKGGDKNVNES 412 (412) T ss_pred eeecccccccccchhhcccccCCCCCcCCC Confidence 9999999999876543 456666665554 No 29 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=3.3e-93 Score=527.58 Aligned_cols=405 Identities=23% Similarity=0.326 Sum_probs=339.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++.+..... +.. .... ... ....+.+.....++.+.|+++++|++||++||++||++||+++++++++ T Consensus 1 Mgl~~~~f~~~~~~-~~~--~~~~-~~~---~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~ 73 (409) T protein:vir:84 1 MSLFTRIFSGPSEE-RTL--TKIS-GIP---SPAEDWAMHGDRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNV 73 (409) T ss_pred CchhhhhhcCCCcc-ccc--cccc-ccc---cccchhhccCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc Confidence 99999874432111 111 1111 111 1111222344567889999999999999999999999999999987665 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEe-eCCCCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~-~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) + ...|+++++|+.+||++|++++||+.++.+++++||+|+++. ++..|.+.+|+|++|..|++....+.. .... T Consensus 74 ~--~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~---~~~~ 148 (409) T protein:vir:84 74 R--IPVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDED---GDWI 148 (409) T ss_pred c--cccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCc---ceEE Confidence 4 456999999999999999999999999999999999999875 678899999999999999987654322 2223 Q ss_pred EEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) Q Consensus 160 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 239 (432) ++.+..+| +.|+++||||++++++.+..+|+||+..+...+.+..++++++.++|+||++|+|+++++..+++++.++ T Consensus 149 ~~~~~~~g--~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 226 (409) T protein:vir:84 149 EPVYRIDG--KVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQVKQ 226 (409) T ss_pred EEEecCCc--eEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHH Confidence 33344454 4689999999998888888899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccc--cccHHHHHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT--LNNIEQQQQQ 317 (432) Q Consensus 240 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~--~~~~~~~~~~ 317 (432) ++++|.+.+ .|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.++ +++.+++... T Consensus 227 ~~~~~~~~~---~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~ 303 (409) T protein:vir:84 227 TQKQWIQSH---HNRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGIN 303 (409) T ss_pred HHHHHHHHh---ccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHH Confidence 999998876 46789999999999999999999999999999999999999999999999876665 4889999999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) |+++||.|+++.||++|++++ ..|++++||++.|++.|.+++++++.+++++|++|+||+|+++|+||+||||+ T Consensus 304 f~~~~l~P~~~~ie~~l~~~L------~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~ggD~ 377 (409) T protein:vir:84 304 FVRHTLLPWLRCIEQALDTFL------PRGQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPIPEGDI 377 (409) T ss_pred HHHHHHHHHHHHHHHHHHHhc------cCCCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Confidence 999999999999999999876 23678999999999999999999999999999999999999999999999999 Q ss_pred eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +++|+|++|++..+..+.. .+..++.++++| T Consensus 378 ~~~~~n~~~~~~~~~~~~~----~~~~~~~~~~gn 408 (409) T protein:vir:84 378 HLQPMNFVPLGYVPPEEPA----QEPQPNSATEGN 408 (409) T ss_pred eeecccccccccCCccccC----cCCCCCCccCCC Confidence 9999999999865443222 222233444444 No 30 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=2e-92 Score=523.35 Aligned_cols=416 Identities=19% Similarity=0.277 Sum_probs=342.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcC-CcC------cccccHHHHhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI-SPS------TISVKGKNALKVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~------~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) |= ..+.+..+.+.....+.+ +.+.++. +.. ...+....++++|+|++||++||++||++||++ T Consensus 1 ~~-------~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l 70 (518) T protein:vir:78 1 ML-------LANGQTLSAPAMAELSPQ---MQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKC 70 (518) T ss_pred Cc-------ccCceeeccchhhhhhhh---hhhcccccceeceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEE Confidence 21 123333333222222222 2221111 111 123445668899999999999999999999999 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccce Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 153 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~ 153 (432) +++++++......|+ +.+|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..+..... T Consensus 71 ~~~~~~~~~~~~~~~-~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~~~~~~~~ 149 (518) T protein:vir:78 71 MFTSGDTETEEHDTG-YAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR 149 (518) T ss_pred EEEcCCccccccchH-HHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEEEcCCCCE Confidence 999888866655445 5556679999999999999999999999999999999999999999999999999988764221 Q ss_pred eccceeEEEe--cccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC Q lcl|Aclame:pro 154 NSKTKMWYVV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD 231 (432) Q Consensus 154 ~~~~~~~~~~--~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 231 (432) . .+++.. ..++..+.|++++|||||++++.+..+|+||+.++...+....++++++.++|+||++|+|++++++. T Consensus 150 ~---~y~~~~~~~~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ 226 (518) T protein:vir:78 150 Y---EYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKR 226 (518) T ss_pred E---EEEEEecCCccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCC Confidence 1 111111 13345678999999999987776667899999999999999999999999999999999999999999 Q ss_pred CCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 232 LNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 232 ~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) +++++.+++++.|++.++|..|+|+++||++|++|+++++++.|+|++|.+++++++||++|||||.+||..+.+|++|. T Consensus 227 ls~e~~~~~k~~~~~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~ 306 (518) T protein:vir:78 227 LSPEAQQRLREQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNI 306 (518) T ss_pred CCHHHHHHHHHHHHHHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 391 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p 391 (432) +++...|+++||.|++..|+++|+++++...+ .+++++||.+.|+++|.+++++.+.+++++|++|+||+|+++|||| T Consensus 307 e~~~~~f~~~tL~P~~~~ie~eln~~L~~~~~--~~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~p 384 (518) T protein:vir:78 307 SAQMRAFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPR 384 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--CcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Confidence 99999999999999999999999999886644 4678999999999999999999999999999999999999999999 Q ss_pred CC--CcceeeeccccccccccccccCCCCCCCCC-CCC-----CCCCCC Q lcl|Aclame:pro 392 EA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGE-VSK-----EGNEGN 432 (432) Q Consensus 392 ~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~-~~~-----~~~e~~ 432 (432) ++ |||++++++|+.|++.......+|++.... .+. +++++. T Consensus 385 ie~~~gD~~~v~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 433 (518) T protein:vir:78 385 SDDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) T ss_pred CCCCCCceeeecccceecccccccccCCCCCCCCCCCCcccccccccCc Confidence 86 899999999999988765554444332111 111 111111 No 31 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=2.9e-92 Score=522.46 Aligned_cols=404 Identities=26% Similarity=0.415 Sum_probs=347.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) =+|+.|+++.+...-.. ....... .+..|.+ .+...++.+.|+++++|++||++||++||++|++++++++. T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~--~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~~- 75 (409) T protein:vir:93 4 ENIVTRIKKKLIDNWID-QSTSKLY----DFSPWKN--RSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV- 75 (409) T ss_pred cchhhhhhhhhhhhhhc-ccccccc----ccccccC--ccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc- Confidence 46777776654211111 1111111 1122332 23446788899999999999999999999999999986643 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|.+.+|+|++|+.|++..+.+.. ...| T Consensus 76 ----~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~~----~~~y 147 (409) T protein:vir:93 76 ----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR----ELYY 147 (409) T ss_pred ----ccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc----EEEE Confidence 36999999999999999999999999999999999999999999999999999999999998876432 2223 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) .....+|..+.|+++||||+|++++.++.+|.||+.++...+.+..+++++. ++.++..++++++.+..+++++.+++ T Consensus 148 ~~~~~~g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~ 225 (409) T protein:vir:93 148 SIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQV 225 (409) T ss_pred EEEcCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHH Confidence 4445667778899999999998888999999999999999999999998885 55556666788889999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.+. ++|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+||+.+.+++++.+++.+.|++ T Consensus 226 ~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~ 302 (409) T protein:vir:93 226 LEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQ 302 (409) T ss_pred HHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 999998775 56889999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||.|++++|+++|++++|++.++..+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++ T Consensus 303 ~~l~P~~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~ 382 (409) T protein:vir:93 303 HTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLI 382 (409) T ss_pred HHHHHHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeee Confidence 99999999999999999999998888999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQA--YLKGGDTNGEVS 425 (432) Q Consensus 401 ~~n~~~~~~~~~~--~~~gg~~~~~~~ 425 (432) ++|++|++...+. ..+||++++++. T Consensus 383 ~~n~~~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:93 383 SGDLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred cccccccccchhhcccccCCCCCcCCC Confidence 9999999876643 456666555444 No 32 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=2.9e-92 Score=522.39 Aligned_cols=417 Identities=20% Similarity=0.286 Sum_probs=342.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHh--h-cCC-cCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEW--L-GIS-PSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-g~~-~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) |= ..+.+..+.+.......+....+.+ . |.. .....+....++++++|++||++||++||++||+++++ T Consensus 1 ~~-------~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~ 73 (518) T protein:vir:10 1 ML-------LANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFT 73 (518) T ss_pred Cc-------ccCceeecCchhhhhhhhhhcccccccccceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEE Confidence 21 1223332222222222221111111 0 110 11123344668899999999999999999999999999 Q ss_pred cCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecc Q lcl|Aclame:pro 77 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 156 (432) Q Consensus 77 ~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~ 156 (432) ++++.....+|++ ++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|..|++..+..... T Consensus 74 ~~~~~~~~~~~~~-~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~~~~~~~~--- 149 (518) T protein:vir:10 74 SGDTETEESDTGY-AKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGR--- 149 (518) T ss_pred cCCCceeccchHH-HHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEEEcCCCCE--- Confidence 9888776666665 556679999999999999999999999999999999999999999999999999988764221 Q ss_pred ceeEEEec----ccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC Q lcl|Aclame:pro 157 TKMWYVVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL 232 (432) Q Consensus 157 ~~~~~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 232 (432) ..|.+. .++..+.|++++|||+|++++.+..+|+||+..+...+....++++++.++|+||++|+|+++.++.+ T Consensus 150 --~~y~~~~~~~~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~l 227 (518) T protein:vir:10 150 --YEYYFQAGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRL 227 (518) T ss_pred --EEEEEEecCCccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCC Confidence 122222 33456789999999999887766679999999999999999999999999999999999999999999 Q ss_pred CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH Q lcl|Aclame:pro 233 NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE 312 (432) Q Consensus 233 ~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~ 312 (432) ++++.+++++.|++.++|..|+|+++||++|++|+++++++.|+|++|.+++.+++||++|||||.+||..+.+|++|.+ T Consensus 228 s~e~~~~~k~~~~~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~e 307 (518) T protein:vir:10 228 SEAAQQRLREQFDRAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNIS 307 (518) T ss_pred CHHHHHHHHHHHHHHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 313 QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE 392 (432) Q Consensus 313 ~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~ 392 (432) ++...|+++||.|++..|+++|+++++...+ .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++|+||+ T Consensus 308 q~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~--~~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pi 385 (518) T protein:vir:10 308 AQMRAFYRDTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRS 385 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccc--CCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Confidence 9999999999999999999999999887654 46789999999999999999999999999999999999999999998 Q ss_pred C--CcceeeeccccccccccccccCCCCCCCC-CCCCC-----CCCCC Q lcl|Aclame:pro 393 A--GGDRLLVNGNMLPIDMAGQAYLKGGDTNG-EVSKE-----GNEGN 432 (432) Q Consensus 393 ~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~-~~~~~-----~~e~~ 432 (432) + |||++++++|+.|++.......++++... +.+.. .+++. T Consensus 386 e~~~gD~~~~~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 433 (518) T protein:vir:10 386 DDPKADELYANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) T ss_pred CCCCCCeeeecccceecccccccccCCCCCCCCCCCCccccccccccc Confidence 5 89999999999998866555444433211 11111 11111 No 33 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=3.5e-92 Score=521.97 Aligned_cols=404 Identities=26% Similarity=0.412 Sum_probs=347.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) =+|++|+|+.+-..- ..... +.. ..+..|.+. +...++.+.|+++++|++||++||++||++|++++++++. T Consensus 4 ~~~~~~~k~~~~~~~--~~~~~--~~~-~~~~~~~~~--~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~~- 75 (409) T protein:vir:94 4 ENIVTRIKKKLIDNW--IDQSA--SKL-YDFSPWKNK--SFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV- 75 (409) T ss_pred cccchhhhhHHhhhh--hcCCc--ccc-cccccccCc--cccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc- Confidence 357777777642111 11111 110 011223332 3456788899999999999999999999999999986643 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|.+.+|+|++|+.|++..+.+.. ...| T Consensus 76 ----~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~----~~~y 147 (409) T protein:vir:94 76 ----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSR----ELYY 147 (409) T ss_pred ----cchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCCc----EEEE Confidence 45999999999999999999999999999999999999999999999999999999999998876432 2223 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) .....+|..+.|+++||||+|++++.++.+|.||+..+...+.+..+++++. ++.++..++++++.+..+++++.+++ T Consensus 148 ~~~~~~g~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~ 225 (409) T protein:vir:94 148 SIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQV 225 (409) T ss_pred EEEcCCceEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHHH Confidence 4445667788899999999998888899999999999999999999998885 44555566788889999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|++.++ ++|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|++.+.+++++.+++.+.|++ T Consensus 226 ~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~ 302 (409) T protein:vir:94 226 LEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQ 302 (409) T ss_pred HHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHH Confidence 999999875 56889999999999999999999999999999999999999999999999888999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) +||.|+++.|+++|++++|++.++..+++++||.+.+++.|.+++++.+.+++++|++|+||+|+++|+||+||||++++ T Consensus 303 ~~l~P~~~~ie~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~ 382 (409) T protein:vir:94 303 HTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLI 382 (409) T ss_pred HHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeEee Confidence 99999999999999999999998888999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccc--cCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQA--YLKGGDTNGEVS 425 (432) Q Consensus 401 ~~n~~~~~~~~~~--~~~gg~~~~~~~ 425 (432) ++|++|++...+. ..+||++++++. T Consensus 383 ~~n~~~~~~~~~~~~~~kGG~~n~~e~ 409 (409) T protein:vir:94 383 SGDLYPIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred cccccccccchhhcccccCCCCCcCCC Confidence 9999999876543 356666554444 No 34 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=2.3e-91 Score=517.47 Aligned_cols=409 Identities=18% Similarity=0.204 Sum_probs=337.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHH-h-hcCCcCccccc-HHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLE-W-LGISPSTISVK-GKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~~~~~v~-~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) ||||++|+..- ... ......+ +.. . .+...+...++ ...++++|+|++||++||++||++|+++++++ T Consensus 1 Mg~~~~~~~~~--~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~ 71 (423) T protein:vir:81 1 MGFLQKLGLAP--SVV----ATPEPIE---LVGPIFESLKLSTKNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERV 71 (423) T ss_pred CchhHhhcccc--ccc----cCccccc---cccccccccccccchhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEe Confidence 99999985321 111 1111111 111 1 11222222333 34456799999999999999999999999887 Q ss_pred CCcc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC--CCceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 78 EYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR--KGKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 78 ~~~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~--~g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) ++|. +...+|+++.+|. +||++||+++||+.++.+++++||+|+++.++. .+.+..|+|+++..+++....+.... T Consensus 72 ~dg~~~~~~~~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~ 150 (423) T protein:vir:81 72 EDGGRERVREGHLARVCK-LANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGS 150 (423) T ss_pred cCCceeeeccchHHHHhh-cCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcc Confidence 7664 5567889888875 899999999999999999999999999999875 35677899999988887665443322 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC---- Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG---- 230 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~---- 230 (432) ..+..+.....+|....+++++|||+|.+++.+..+|+||+..+++++....++++++.++|+||+.|+|+++.+. T Consensus 151 ~~Y~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~ 230 (423) T protein:vir:81 151 LDYIIIESGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKA 230 (423) T ss_pred eEEEEEEecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccC Confidence 2222333334567788899999999998888888899999999999999999999999999999999999998764 Q ss_pred -CCCHHHHHHHHHHHHHHhc-ccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 231 -DLNEDAKKVFRENFESMSS-GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 231 -~~~~~~~~~~~~~~~~~~~-g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) .+++++.++++++|++.+. +..|+|++++|++|++|+++++++.|+|++|.+++.+++||++|||||.+||..+.++| T Consensus 231 ~~l~~e~~~~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~ 310 (423) T protein:vir:81 231 GKWDAESRTRFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANY 310 (423) T ss_pred ccCCHHHHHHHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCc Confidence 4689999999999999984 67889999999999999999999999999999999999999999999999999989999 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh-cchhhhhhhhhhhhhhhHHHHHHHHHHHHh-CCCcCHHHHHHH Q lcl|Aclame:pro 309 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-DKGFYSKFNVDAILRADIKTRYEAYRTGIQ-GGFLKPNEARSK 386 (432) Q Consensus 309 ~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~-~g~~t~nE~R~~ 386 (432) +|.|++.+.|+++||.|+++.||++|+++++++.+. ..+++++||.+.|++.|.+++++.+.+++. +||+|+||+|++ T Consensus 311 sn~e~~~~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~ 390 (423) T protein:vir:81 311 SNVREFRKALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAM 390 (423) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHH Confidence 999999999999999999999999999999988765 468899999999999999999999999885 699999999999 Q ss_pred hCCCCCCCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 387 EDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 387 ~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) +||||+||||++++|.|+.+.+.. .+.+++.+. T Consensus 391 ~gl~p~~gGD~~~~p~n~~~~~~~----~~~~~~~~t 423 (423) T protein:vir:81 391 DNLPSIDGGDDLARPLNTEFGDSE----DAPGEEVET 423 (423) T ss_pred hCCCCCCCcceeecccccccCccC----CCCCCCCCC Confidence 999999999999999998775432 111222211 No 35 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=4.1e-91 Score=516.13 Aligned_cols=416 Identities=23% Similarity=0.356 Sum_probs=333.5 Q ss_pred CchHHHH--------HHhc-cccccccccccccCCchHHHHHhh-c-CCcCcccccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVDSV--------KKFF-NFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~~l--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~ 69 (432) |++++|= .+.| ..+++... . ...+...+...+ + ...+...++.+.||++++||+||++||++||++ T Consensus 11 ~~~~~~~~~~~~~~~~~lf~~~e~R~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~l 87 (441) T protein:vir:79 11 VDFKSRKQSRKELVVVGIFYKNEKRDLQ--Y-NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARM 87 (441) T ss_pred ccccccccchhhhhcccccccccccccc--C-CCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccC Confidence 2222110 0011 11122111 1 111112222222 1 122344688899999999999999999999999 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcC Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 149 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~ 149 (432) |+++++++ +....|+++++|+.+||++|++++||+.++.+++++||+|++++|+..|++.+|+|++|+.|++..++ T Consensus 88 p~~~~~~~----~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~ 163 (441) T protein:vir:79 88 PIRVTVNG----QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDA 163 (441) T ss_pred ceeeecCc----cccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECC Confidence 99998643 34567999999999999999999999999999999999999999999999999999999999999887 Q ss_pred ccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 150 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) .+...+... .......+..+.+++++|||+|+ ++.++++|+||+.++.+++.+..+++++..++|+||++|+|+++++ T Consensus 164 ~g~~~~~~~-~~~~~~~~~~~~~~~~dvih~k~-~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~ 241 (441) T protein:vir:79 164 RGRLYYFHQ-RIDSNGNNIERNVKFEDMLDIKF-YSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMK 241 (441) T ss_pred CccEEEEEE-EeccCCceeEEEEccccEEEecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcC Confidence 644322110 01112234457899999999995 4677899999999999999999999999999999999999999999 Q ss_pred CCC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 230 GDL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 230 ~~~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) +.. ++++.+++++.|.++++|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||... .++ T Consensus 242 ~~~~~~e~~e~~r~~~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~ 320 (441) T protein:vir:79 242 GVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-ANM 320 (441) T ss_pred CCCCCHHHHHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CCc Confidence 887 578889999999999999999999999999999999999999999999999999999999999999998643 233 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhC Q lcl|Aclame:pro 309 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 388 (432) Q Consensus 309 ~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~g 388 (432) +.+++.. ++..||.|++++|+++|+++++.+. .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++| T Consensus 321 -s~~q~~~-~~~~tl~P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~g 395 (441) T protein:vir:79 321 -SITDANL-DYLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDG 395 (441) T ss_pred -cHHHHHH-HHHHHHHHHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 4455554 4567999999999999999987653 4688999999999999999999999999999999999999999 Q ss_pred CCCCCCcce--eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 389 LPPEAGGDR--LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 389 l~p~~~gd~--~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |||+||||. +++++|++|++..++.+...... .+.+.+++|+| T Consensus 396 l~Pi~ggd~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~~ 440 (441) T protein:vir:79 396 LAPIPGGNGSIHRVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred CCCCCCCCcceEeecccccccccccccccccccc-cccccCCCCCC Confidence 999999884 78999999999876544332222 23445666666 No 36 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=4.1e-91 Score=516.13 Aligned_cols=416 Identities=23% Similarity=0.356 Sum_probs=333.5 Q ss_pred CchHHHH--------HHhc-cccccccccccccCCchHHHHHhh-c-CCcCcccccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVDSV--------KKFF-NFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~~l--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~ 69 (432) |++++|= .+.| ..+++... . ...+...+...+ + ...+...++.+.||++++||+||++||++||++ T Consensus 11 ~~~~~~~~~~~~~~~~~lf~~~e~R~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~l 87 (441) T protein:vir:94 11 VDFKSRKQSRKELVVVGIFYKNEKRDLQ--Y-NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARM 87 (441) T ss_pred ccccccccchhhhhcccccccccccccc--C-CCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccC Confidence 2222110 0011 11122111 1 111112222222 1 122344688899999999999999999999999 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcC Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 149 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~ 149 (432) |+++++++ +....|+++++|+.+||++|++++||+.++.+++++||+|++++|+..|++.+|+|++|+.|++..++ T Consensus 88 p~~~~~~~----~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~ 163 (441) T protein:vir:94 88 PIRVTVNG----QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDA 163 (441) T ss_pred ceeeecCc----cccccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECC Confidence 99998643 34567999999999999999999999999999999999999999999999999999999999999887 Q ss_pred ccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 150 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) .+...+... .......+..+.+++++|||+|+ ++.++++|+||+.++.+++.+..+++++..++|+||++|+|+++++ T Consensus 164 ~g~~~~~~~-~~~~~~~~~~~~~~~~dvih~k~-~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~ 241 (441) T protein:vir:94 164 RGRLYYFHQ-RIDSNGNNIERNVKFEDMLDIKF-YSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMK 241 (441) T ss_pred CccEEEEEE-EeccCCceeEEEEccccEEEecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcC Confidence 644322110 01112234457899999999995 4677899999999999999999999999999999999999999999 Q ss_pred CCC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 230 GDL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 230 ~~~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) +.. ++++.+++++.|.++++|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||... .++ T Consensus 242 ~~~~~~e~~e~~r~~~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~ 320 (441) T protein:vir:94 242 GVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-ANM 320 (441) T ss_pred CCCCCHHHHHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CCc Confidence 887 578889999999999999999999999999999999999999999999999999999999999999998643 233 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhC Q lcl|Aclame:pro 309 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 388 (432) Q Consensus 309 ~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~g 388 (432) +.+++.. ++..||.|++++|+++|+++++.+. .+++++||.+.|++.|.+++++.+.+++++|++|+||+|+++| T Consensus 321 -s~~q~~~-~~~~tl~P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~g 395 (441) T protein:vir:94 321 -SITDANL-DYLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDG 395 (441) T ss_pred -cHHHHHH-HHHHHHHHHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 4455554 4567999999999999999987653 4688999999999999999999999999999999999999999 Q ss_pred CCCCCCcce--eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 389 LPPEAGGDR--LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 389 l~p~~~gd~--~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |||+||||. +++++|++|++..++.+...... .+.+.+++|+| T Consensus 396 l~Pi~ggd~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~kgGe~~ 440 (441) T protein:vir:94 396 LAPIPGGNGSIHRVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred CCCCCCCCcceEeecccccccccccccccccccc-cccccCCCCCC Confidence 999999884 78999999999876544332222 23445666666 No 37 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=3.3e-91 Score=516.60 Aligned_cols=404 Identities=21% Similarity=0.274 Sum_probs=337.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHh-hcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEW-LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) |+||..+... ..+.|...+..+ ..++.. ..++..+||++++||+||++||++||++|+++++.+++ T Consensus 1 m~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-g~~~~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~ 67 (417) T protein:vir:38 1 MKLFRGLATE------------VDPHWADHLLDSGVIPSFR-GGYLGISALRNSDVLTAVSIVSGDVSRFPLVITDSSTD 67 (417) T ss_pred CccccccccC------------CCccchhhhcccccccccC-CceechhhcccHHHHHHHHHHHHhhccCeeEEEEcCCc Confidence 9998432110 111121111111 111111 12345679999999999999999999999999998776 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-CceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +. ...|+++++|+.+||++||+++||+.++.+++++||+|++++|+.. |.+.+|+|++|+.|++..+..+. .. T Consensus 68 ~~--~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~~----~~ 141 (417) T protein:vir:38 68 EV--IDLANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPDN----II 141 (417) T ss_pred ce--eccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCCe----EE Confidence 64 4468999999999999999999999999999999999999999865 67999999999999988765432 22 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) +.+....++....++++||||||++ +.++++|+||+.++..++.+..+++++..++|+||++|+++++.+..+++++.+ T Consensus 142 y~~~~~~~~~~~~~~~~dviH~r~~-~~d~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~ 220 (417) T protein:vir:38 142 YRFTPYNSSMQKVCGFEDVIHWKFF-SYDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQ 220 (417) T ss_pred EEEEEcCCcEEEEecCcceEEecCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHH Confidence 2333344555677999999999965 678899999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~ 318 (432) +++++|++.++|. |+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+|+. ..++++.+++.+.| T Consensus 221 ~~~~~~~~~~~g~-n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~--~~~~s~~e~~~~~~ 297 (417) T protein:vir:38 221 KIREDFERAQAGA-DAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQ--NSPNQSVKQLADDY 297 (417) T ss_pred HHHHHHHHHhccc-ccCCceeccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCC--CCcchhHHHHHHHH Confidence 9999999999885 89999999999999999999999999999999999999999999999974 55889999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc--c Q lcl|Aclame:pro 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG--D 396 (432) Q Consensus 319 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g--d 396 (432) +++||.|+++.|+++|++++|++.+. .+++++||.+.+.+.+. ..+++++++|++|+||+|+++|+||+||| | T Consensus 298 ~~~tl~P~~~~ie~~l~~~Ll~~~~~-~~~~~~fd~~~l~~~~~----~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d 372 (417) T protein:vir:38 298 IRNDLPFYFEPITSEFELKLLDDAQR-HQYCIGFDTKSVNGLPI----ADVNTAVNGGLWTGNEGRAELGKKPLKDPNMD 372 (417) T ss_pred HHHHHHHHHHHHHHHHHhhhcChhhc-ccceEEechhhhhHHHH----HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCC Confidence 99999999999999999999988765 46889999888765443 34678899999999999999999999876 8 Q ss_pred eeeeccccccccccccc------cCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 397 RLLVNGNMLPIDMAGQA------YLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 397 ~~~~~~n~~~~~~~~~~------~~~gg~~~~~~~~~~~e~~ 432 (432) ++++|+|++|++..++. ..+||+.+.+..+++++.| T Consensus 373 ~~~~~~n~~~~d~~~~~~~~~~~~~kgg~~~~~~~~~~~~~~ 414 (417) T protein:vir:38 373 RIQSTLNTVFLDQKEAYQAEHAAELKGGDTNAKGNQNGSGTN 414 (417) T ss_pred eeeecccccccccccccccccccccCCCCCCCCCCCcCCCCc Confidence 89999999999865543 4577888777776666666 No 38 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=4e-91 Score=516.20 Aligned_cols=408 Identities=23% Similarity=0.351 Sum_probs=337.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-c-CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||++.. ++... ....+.+.+...+ + ...+...++...|+++++||+||++||++||++||++++.+ T Consensus 1 Mg~f~~~~------~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~- 70 (416) T protein:vir:81 1 MGIFYKNE------KRDLQ---YNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG- 70 (416) T ss_pred CCcccccc------ccccc---CCCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCc- Confidence 99996532 22111 1111112222222 2 23345578889999999999999999999999999998643 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +....|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|++|++..+..+...+. T Consensus 71 ---~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~-- 145 (416) T protein:vir:81 71 ---QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYF-- 145 (416) T ss_pred ---cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEE-- Confidence 334579999999999999999999999999999999999999999999999999999999999998876443221 Q ss_pred eEEEe--cccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHH Q lcl|Aclame:pro 159 MWYVV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NED 235 (432) Q Consensus 159 ~~~~~--~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~ 235 (432) +... ...+..+.+++++|||+|++ +.++++|.||+..+.+++.+..++++++.++|+||++|+|++++++.. +++ T Consensus 146 -~~~~~~~~~~~~~~~~~~evihir~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~ 223 (416) T protein:vir:81 146 -HQRIDSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKK 223 (416) T ss_pred -EEEecCCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHH Confidence 1111 22234577999999999964 678899999999999999999999999999999999999999999887 467 Q ss_pred HHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 315 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~ 315 (432) +.+++++.|+++++|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+|+.... + ++.+++. T Consensus 224 ~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~~~~~~~ 301 (416) T protein:vir:81 224 ARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDAN 301 (416) T ss_pred HHHHHHHHHHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC-C-ccHHHHH Confidence 8899999999999999999999999999999999999999999999999999999999999999986432 2 2445554 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) .++.+||.|++++|+++|+++++... .+.+++||++.|++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 302 -~~~~~~l~P~~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~g 377 (416) T protein:vir:81 302 -LDYLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGG 377 (416) T ss_pred -HHHHHHHHHHHHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 44567999999999999999987653 46789999999999999999999999999999999999999999999988 Q ss_pred c--eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 D--RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d--~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) | .+++++|++|++..++.+..... ..+.+-+++|+| T Consensus 378 d~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~kgGe~n 415 (416) T protein:vir:81 378 NGSIHRVDLNHVNIELVDEYQMNKSR-ATDKKLKGGEEN 415 (416) T ss_pred CcceEeecccccccccccccCccccc-ccccccCCCCCC Confidence 7 58899999999877654333222 223455667777 No 39 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=4e-91 Score=516.20 Aligned_cols=408 Identities=23% Similarity=0.351 Sum_probs=337.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-c-CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-G-ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||++.. ++... ....+.+.+...+ + ...+...++...|+++++||+||++||++||++||++++.+ T Consensus 1 Mg~f~~~~------~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~- 70 (416) T protein:vir:45 1 MGIFYKNE------KRDLQ---YNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG- 70 (416) T ss_pred CCcccccc------ccccc---CCCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCc- Confidence 99996532 22111 1111112222222 2 23345578889999999999999999999999999998643 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +....|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|++|++..+..+...+. T Consensus 71 ---~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~-- 145 (416) T protein:vir:45 71 ---QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYF-- 145 (416) T ss_pred ---cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEE-- Confidence 334579999999999999999999999999999999999999999999999999999999999998876443221 Q ss_pred eEEEe--cccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHH Q lcl|Aclame:pro 159 MWYVV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NED 235 (432) Q Consensus 159 ~~~~~--~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~ 235 (432) +... ...+..+.+++++|||+|++ +.++++|.||+..+.+++.+..++++++.++|+||++|+|++++++.. +++ T Consensus 146 -~~~~~~~~~~~~~~~~~~evihir~~-~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~ 223 (416) T protein:vir:45 146 -HQRIDSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKK 223 (416) T ss_pred -EEEecCCCceeEEEEccccEEEeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHH Confidence 1111 22234577999999999964 678899999999999999999999999999999999999999999887 467 Q ss_pred HHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ 315 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~ 315 (432) +.+++++.|+++++|..|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+|+.... + ++.+++. T Consensus 224 ~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~-~-~~~~~~~ 301 (416) T protein:vir:45 224 ARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDAN 301 (416) T ss_pred HHHHHHHHHHHHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCC-C-ccHHHHH Confidence 8899999999999999999999999999999999999999999999999999999999999999986432 2 2445554 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGG 395 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~g 395 (432) .++.+||.|++++|+++|+++++... .+.+++||++.|++.|.+++++.+.+++++|+||+||+|+++|+||+||| T Consensus 302 -~~~~~~l~P~~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~g 377 (416) T protein:vir:45 302 -LDYLSTLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGG 377 (416) T ss_pred -HHHHHHHHHHHHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 44567999999999999999987653 46789999999999999999999999999999999999999999999988 Q ss_pred c--eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 D--RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d--~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) | .+++++|++|++..++.+..... ..+.+-+++|+| T Consensus 378 d~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~kgGe~n 415 (416) T protein:vir:45 378 NGSIHRVDLNHVNIELVDEYQMNKSR-ATDKKLKGGEEN 415 (416) T ss_pred CcceEeecccccccccccccCccccc-ccccccCCCCCC Confidence 7 58899999999877654333222 223455667777 No 40 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=5.9e-91 Score=515.24 Aligned_cols=413 Identities=23% Similarity=0.351 Sum_probs=335.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc--CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) |+++..|++ .+++.. .. ...+...+...++ ...+...++...||++++|++||++||++||++|+++++.+ T Consensus 23 ~~~~~~f~~---~e~r~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~~- 95 (441) T protein:vir:98 23 LVVVGIFYK---NEKRDL--QY-NEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG- 95 (441) T ss_pred hhccccccc---cccccc--cC-CCcchHHHHHHhhcccccCccccchhhhhccHHHHHHHHHHHHhhccCceEEecCC- Confidence 333322211 112211 11 1111122222221 12234568899999999999999999999999999998643 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) +....|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|+.|++..+..+...+... T Consensus 96 ---~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~ 172 (441) T protein:vir:98 96 ---QINYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKLDARGRLYYFHQ 172 (441) T ss_pred ---cccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEECCCCcEEEEEE Confidence 34567999999999999999999999999999999999999999999999999999999999999887654322111 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAK 237 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~ 237 (432) .......+..+.+++++|||+|+ ++.++++|+||+.++.+++.+..++++++.++|+||++|+|++++++.+ ++++. T Consensus 173 -~~~~~~~~~~~~~~~~dviHir~-~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~ 250 (441) T protein:vir:98 173 -RIDSNGNNIERNVKFEDMLDIKF-YSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKAR 250 (441) T ss_pred -EeccCcceeeEEEccccEEEecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHH Confidence 11112234467899999999995 4677899999999999999999999999999999999999999999987 47788 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~ 317 (432) +++++.|++.++|.+|+|++++|++|++|+++++++.|+|++|.+++++++||++|||||.+|+.... + ++.+++... T Consensus 251 ~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~-~-~s~~q~~~~ 328 (441) T protein:vir:98 251 DRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETA-N-MSITDANLD 328 (441) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCC-C-ccHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999986432 3 345666555 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc- Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD- 396 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd- 396 (432) |. +||.|++++|+++|+++++... .+.+++||.+.|++.|.+++++.+.+++++|++|+||+|+++||||+|||| T Consensus 329 y~-~tl~P~~~~ie~~ln~~L~~~~---~~~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~ 404 (441) T protein:vir:98 329 YL-STLKPYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNG 404 (441) T ss_pred HH-HHHHHHHHHHHHHHHhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCc Confidence 54 6999999999999999987653 467899999999999999999999999999999999999999999999988 Q ss_pred -eeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 397 -RLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 397 -~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+++++|++|++..++.+...... ++.+.+++|+| T Consensus 405 ~~~~~~~n~~~~~~~~~~q~~~~~~-~~~~~kgGe~n 440 (441) T protein:vir:98 405 SIHRVDLNHVNIELVDEYQMNKSRA-TDKKLKGGEEN 440 (441) T ss_pred ceEeecccccccccccccccccccc-cccccCCCCCC Confidence 578999999999877654433222 23445666666 No 41 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=5.5e-89 Score=504.44 Aligned_cols=397 Identities=18% Similarity=0.218 Sum_probs=333.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+.. .......++.+..+++...+ ..++...||++++||+||++||++||++|+++++++++ T Consensus 1 m~~f~~~-------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g~- 65 (406) T protein:vir:97 1 MSFFQPL-------------GTSKVSYDDYISSVLAGDVS-QKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD- 65 (406) T ss_pred Ccccccc-------------CCCCCCcchHHHHHhcCCCC-cccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCcc- Confidence 9998531 11112233345556654433 34566679999999999999999999999988875542 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC-CCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) ...+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+. .|.+.+|+|++|+.|++..++.+.. .+ T Consensus 66 --~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~~----~y 139 (406) T protein:vir:97 66 --IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VY 139 (406) T ss_pred --ccccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCceE----EE Confidence 3557999999999999999999999999999999999999999985 5899999999999999987764322 22 Q ss_pred EEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH Q lcl|Aclame:pro 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) Q Consensus 160 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 239 (432) .+....++....++++||||||+ ++.++++|+||+.++..++.+..+++++..++|+||+.+++++..+..+++++.++ T Consensus 140 ~~~~~~~~~~~~~~~~evih~r~-~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~ 218 (406) T protein:vir:97 140 TFTDMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) T ss_pred EEEecCCceEEEEccccEEEecC-CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHH Confidence 33445677888999999999995 46788899999999999999999999999999999999999999899999999999 Q ss_pred HHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) Q Consensus 240 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~ 319 (432) ++++|++.++| .|+|+++|+++|++|+++++++.|+|++|.+++++++||++|||||.+||+ ..++++.+++.+.|+ T Consensus 219 ~~~~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~--~~~~~~~e~~~~~f~ 295 (406) T protein:vir:97 219 ARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYV 295 (406) T ss_pred HHHHHHHHhcc-cccCceeecCCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCC--CCCcchHHHHHHHHH Confidence 99999999988 588999999999999999999999999999999999999999999999985 346789999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--cce Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDR 397 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--gd~ 397 (432) +.||.|++++|+++|++++|.+.+. .+++++||++. +.+.+++.+.+++++|+||+||+|+++|+||+++ ||+ T Consensus 296 ~~~l~P~~~~ie~~l~~kll~~~~~-~~~~i~fd~~~----~~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~ 370 (406) T protein:vir:97 296 TNDLPFYFDAITSELGLKTLNDKDR-RLYHIEFDTRS----VTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) T ss_pred HHHHHHHHHHHHHHHhhhhcChhhc-cceeEEEecCc----cchhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Confidence 9999999999999999999988664 56888998755 4556677888999999999999999999999965 999 Q ss_pred eeeccccccccccccccC------CCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYL------KGGDTNGEVSKE 427 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~------~gg~~~~~~~~~ 427 (432) +++|+|++|++...+.+. +||+++++..+. T Consensus 371 ~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) T protein:vir:97 371 YQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) T ss_pred EeeccCccchhcccccccccccccCCCCCCCCCCCC Confidence 999999999987654333 222222221111 No 42 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=4.9e-89 Score=504.71 Aligned_cols=411 Identities=15% Similarity=0.188 Sum_probs=344.5 Q ss_pred hHHHHHHhccccccccccccccCCchHHHHHhhcCCc-----CcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 3 IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-----STISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) |.+.|.+++. +..+... + ..+.+..|+|... +...++.+.|+++|+||+||++||++||++|+++++.+ T Consensus 1 ~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~ 74 (460) T protein:vir:10 1 MANRIIRALR---ELTGLDN--K-FNDAFIKYIGQTFTKYDNNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVK 74 (460) T ss_pred CchhHHHHHh---hhhccCC--C-chHHHHHhhccccCCCccchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEecc Confidence 6677777653 1111111 1 1234556666432 34457788899999999999999999999999999988 Q ss_pred CCccee---------------------------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC-- Q lcl|Aclame:pro 78 EYGIQR---------------------------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-- 128 (432) Q Consensus 78 ~~~~~~---------------------------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~-- 128 (432) +++... ...+++..+|+.+||++||+++||+.++.+++++||+|++++|+. T Consensus 75 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~ 154 (460) T protein:vir:10 75 DTKAYQQLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDG 154 (460) T ss_pred CCccchhhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCC Confidence 876321 223455667888999999999999999999999999999999964 Q ss_pred --CCceEEEEEEcCcceEEEEcCcccee--ccceeEEEecccCceEEEccceEEEEecCCCC-----CcccccCHHHHHH Q lcl|Aclame:pro 129 --KGKVQALWPIDASKVTVYIDDVGLLN--SKTKMWYVVNTGGQQRVLKPEEILHFKNGITL-----DGLVGVPTMEYLK 199 (432) Q Consensus 129 --~g~~~~l~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~-----~~~~G~s~~~~~~ 199 (432) .|.+.+|+|++|..|++..+.+.... ......|.+..+|....|+++||||||++++. ++++|+||+..+. T Consensus 155 ~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~ 234 (460) T protein:vir:10 155 INAGVPSQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAIL 234 (460) T ss_pred ccCceeEEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHH Confidence 47899999999999999988765432 22344556667888899999999999977665 4579999999999 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH Q lcl|Aclame:pro 200 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 279 (432) Q Consensus 200 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~ 279 (432) ..+.+..++++++.++|+||+.|+++++.+..+++++.+++++.|++.++|.+|+|+++++++|++|+++++++.|+|++ T Consensus 235 ~~i~~~~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~ 314 (460) T protein:vir:10 235 RNINSQNSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPF 314 (460) T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHhcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhh Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 357 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 357 (432) |.+++.+++||++|||||.+||..+. .+++|.+++.+.|++.||.|+++.|+++|+++++++.+...+++++||++.+ T Consensus 315 e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l 394 (460) T protein:vir:10 315 DYLKYDQKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISEL 394 (460) T ss_pred HHHHHHHHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchh Confidence 99999999999999999999998654 4689999999999999999999999999999999988888899999999888 Q ss_pred --hhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 358 --LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 358 --~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~--~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) ++.|.+ ....++++|++|+||+|+++|+||+ +|||++++|+|++|++..+++...++++..+ T Consensus 395 ~~l~~d~~----~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~nq~~ 460 (460) T protein:vir:10 395 PEMQTDMV----AMASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSNNLIDSAFNQNQ 460 (460) T ss_pred hhHHHHHH----HHHHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhcccccCCCcccCCC Confidence 333443 3445778999999999999999998 5899999999999998765433333222222 No 43 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=1.4e-87 Score=496.78 Aligned_cols=399 Identities=21% Similarity=0.245 Sum_probs=337.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHh-hcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEW-LGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) ||||++|++.. ++..... .. .....+ .+...+...++...++++++|++||++||++||++||++++.+++ T Consensus 1 Mg~f~~~~~~~---~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 72 (406) T protein:vir:95 1 MGLFDRWRRTK---RKSKIRA--DT---GYVGLFMSGEDVSFLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTED 72 (406) T ss_pred Ccchhhhcccc---ccccccc--cc---hhhhhhccCcccCccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCC Confidence 99999886532 2211111 11 111122 234455556788899999999999999999999999999999987 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe--EEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS--YANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT 157 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~--~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~ 157 (432) +.+ ..+|++.++|+.+||++||+++||+.++.+++++|++ |+++.++..|.+.+|+|++|.+|++..+.++ T Consensus 73 ~~~-~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~------ 145 (406) T protein:vir:95 73 GDI-RIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDG------ 145 (406) T ss_pred cce-eecchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCe------ Confidence 754 4678999999999999999999999999999998765 6667888899999999999999999888752 Q ss_pred eeEEEecccCceEEEccceEEEEec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 158 KMWYVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+..++ +.|+++||||+|+ +++.++++|.||+..+..++.+..++.+++.++|+||+.|+++++.+..+++++ T Consensus 146 ---~~~~~~~--~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~ 220 (406) T protein:vir:95 146 ---YQVLYGG--QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELS 220 (406) T ss_pred ---EEEEecc--EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Confidence 1222233 4699999999995 567788999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecC-CCceeeec-CCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMP-VGYQFQPI-SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~-~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) .++++++|.+.++|..|+|+++|+. +|.+++++ .+++.|+|++|.+++++++||++|||||++||.. ++.+++ T Consensus 221 ~~~~~~~~~~~~~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~-----~~~~~~ 295 (406) T protein:vir:95 221 SEEGRNAVFKKYLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIG-----EFNRDE 295 (406) T ss_pred HHHHHHHHHHHhccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-----CchHHH Confidence 9999999999999999999998876 45667775 4789999999999999999999999999999753 356788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) ..+|++.||.|+++.|+++|++++|.+. +++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||+|| T Consensus 296 ~~~~~~~~l~P~~~~ie~~l~~~l~~~~----~~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~~~ 371 (406) T protein:vir:95 296 YNNFINSTILPIAKGIEQELTRKLLISP----DLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPKEG 371 (406) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCC----CcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 8999999999999999999999998764 468999999999999999999999999999999999999999999999 Q ss_pred cceeeecccccccccccccc-CCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAGQAY-LKGGDTNGEVSKEG 428 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~~~~-~~gg~~~~~~~~~~ 428 (432) ||++++|+|++|++..++.+ .+||+++++..++. T Consensus 372 gd~~~~~~n~~~~~~~~~~~~~k~g~~~~~~~~~~ 406 (406) T protein:vir:95 372 LSELVILENYIPLDKIGDQSKLKGGDNSGADGQTD 406 (406) T ss_pred cceeeeccCccchhhcccccccCCCCCCCCCCCCC Confidence 99999999999998876543 45555544322221 No 44 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=3.3e-87 Score=494.68 Aligned_cols=419 Identities=14% Similarity=0.146 Sum_probs=342.2 Q ss_pred CchHHHHHHhccccccccccc--------------cccCCchHHHHHhhcCC------cCcccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV--------------IELNKDDEKLLEWLGIS------PSTISVKGKNALKVATVFACIK 60 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~------~~~~~v~~~~a~~~~~v~~~i~ 60 (432) ||||+||++.+....+..... .......+.+..+++.. .+...|+.+.|+++++|++||+ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~~~i~ 80 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVFACML 80 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHHHHHH Confidence 999999998765332222211 11222344555555432 2456789999999999999999 Q ss_pred HHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC--------Cce Q lcl|Aclame:pro 61 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK--------GKV 132 (432) Q Consensus 61 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~--------g~~ 132 (432) +||++||++||+++++++++++....|+++.|+ .+||++||+++||+.++.+++++||+|++++|+.. |.+ T Consensus 81 ~Ia~~ia~lp~~~~~~~~~~~~~~~~~~~~~L~-~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~ 159 (466) T protein:vir:81 81 VRQLVFSSVRFRWQRLRDGKPSDTFGSRDLQIL-ETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVV 159 (466) T ss_pred HHHHhhccCceEEEEecCCceeeccccHHHHHh-hCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCcce Confidence 999999999999999887777766777776655 69999999999999999999999999999999765 458 Q ss_pred EEEEEEcCcceEEEEcCccceeccceeEEEecc-----cCceEEEccceEEEEecC-CCCCcccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNT-----GGQQRVLKPEEILHFKNG-ITLDGLVGVPTMEYLKSTLENSA 206 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~vih~~~~-~~~~~~~G~s~~~~~~~~~~~~~ 206 (432) .+|+|++|.+|++..+.+...... |.++. ++....|+++||||||.. ++.++.+|.||+..+.+++.+.. T Consensus 160 ~~l~~l~~~~v~~~~~~~~~~~~~----y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~ 235 (466) T protein:vir:81 160 VEERMVRGGRGELGGGQLGWRKVG----YLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQ 235 (466) T ss_pred eEEEEecCcceEEEEcCCCceEEE----EEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHH Confidence 899999999999998776443322 22222 335578999999999964 57889999999999999999999 Q ss_pred HHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHH Q lcl|Aclame:pro 207 SADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTI 286 (432) Q Consensus 207 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~ 286 (432) +++++..++|+||+.|+|+++.+..+++++.+++++.|++.++|..|+|+++|+++|++|+++++++.|+|++|.+++++ T Consensus 236 a~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~ 315 (466) T protein:vir:81 236 AMSKHQAKFFDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGE 315 (466) T ss_pred HHHHHHHHHHhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcCChhhccCc---cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHH Q lcl|Aclame:pro 287 RQIATAFGIKMHQLNDL---SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIK 363 (432) Q Consensus 287 ~~I~~~~gvp~~~l~~~---~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~ 363 (432) ++||++|||||++||.. ..++|+|.|++.+.|+++||.|++++||++|+++++...+. .+++++||.+.+++.|.+ T Consensus 316 ~~Ia~~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~-~~~~~~f~~~~llr~d~~ 394 (466) T protein:vir:81 316 TRIAAAAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPD-VRLWYDADDVPFLREDEK 394 (466) T ss_pred HHHHHHhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccC-cceEEEecchhhhccCHH Confidence 99999999999999865 45689999999999999999999999999999999876654 457899999999999999 Q ss_pred HHHHH-------HHHHHhCCCcCHHHHHHHhCCCCCCCcceeee-ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 364 TRYEA-------YRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV-NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 364 ~~~~~-------~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~-~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +++++ +..++++|+ |+||+|. ++++||.++. +.++.|++........+.+ ..++..+++|+| T Consensus 395 ~r~~~~~~~~~~~~~~~~~g~-t~nE~r~-----~~~~gd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Gg~~n 464 (466) T protein:vir:81 395 DAADIQKVRAETINTLITAGY-EPESVVA-----AVNSGDLRLLKHTGLTSVQLLPPGVSASAS-SDTPTSGGADDN 464 (466) T ss_pred HHHHHHHHHHHHHHHHHHcCC-Chhhccc-----cccCCccccccCCCcchhhhcccccccccC-CCCcccCCCCcC Confidence 88775 566888895 9999995 4567776543 4566666554333332222 222334445555 No 45 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=1.2e-85 Score=486.21 Aligned_cols=394 Identities=21% Similarity=0.304 Sum_probs=327.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh--cCCcCcccccH-HHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL--GISPSTISVKG-KNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~v~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) ||||++|++. .+ ..+... ..++ +...+...++. ..+..+|+|++||++||++||++|+++++.. T Consensus 1 Mg~~~~f~~k----~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~ 67 (403) T protein:vir:80 1 MGLFNFFRRK----TR--SEPTNA-------ISWFLTQEAYDTLAIPGYTRLSDNPEVRMAVHKIAELISSMTIHLMQNT 67 (403) T ss_pred Cccccccccc----cc--ccccch-------hhhhcccccccccccchhhhhhhhHHHHHHHHHHHHhhhhCceEEEEec Confidence 9999876532 11 111110 1111 11112222222 3455789999999999999999999999988 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHh--cCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceec Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNL--YGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 155 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~--~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~ 155 (432) ++|.. ..+|+++++|+.+||++||+++||+.++.++++ +||||+++.++..|.+.+|||++|..|++..+..+.. T Consensus 68 ~~g~~-~~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g~~-- 144 (403) T protein:vir:80 68 DNGDI-RIKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTGYQ-- 144 (403) T ss_pred CCcee-ecCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCceE-- Confidence 87754 457999999999999999999999999999998 4889999999999999999999999999988775321 Q ss_pred cceeEEEecccCceEEEccceEEEEec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 156 KTKMWYVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) .+ +. .+.++++|||||+. +++.++++|.||+..+..++....+++++..++|+||+.|+++++.+..+++ T Consensus 145 ---~~--y~----~~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~ 215 (403) T protein:vir:80 145 ---IW--YQ----GKAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAE 215 (403) T ss_pred ---EE--Ee----ecccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCh Confidence 11 21 24689999999994 5777889999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHhcccccccceeecCCC-ceeeecC-CChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALMPVG-YQFQPIS-LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE 312 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g-~~~~~~~-~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~ 312 (432) ++.++.+++|.+.+.|..|+|++++++++ .++.++. +++.|+|++|.+++++++||++|||||++||.. ++.+ T Consensus 216 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~-----~~~~ 290 (403) T protein:vir:80 216 LSSEEGRNAVFKKYLEASEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVG-----KYDK 290 (403) T ss_pred HHHHHHHHHHHHHHhhhhhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCC-----CccH Confidence 99999999999999998899999888665 4555544 688999999999999999999999999999753 2344 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 313 QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE 392 (432) Q Consensus 313 ~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~ 392 (432) +...+|+++||.|++++|+++|++++|.+.+ ++++||.+.|++.|.+++++.+.+++++|+||+||+|+++||||+ T Consensus 291 ~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~----~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~ 366 (403) T protein:vir:80 291 DEYNNFINSTILPIAKGIEQELTRKLLISPD----LYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPK 366 (403) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCC----cEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Confidence 5667899999999999999999999987643 689999999999999999999999999999999999999999999 Q ss_pred CCcceeeecccccccccccccc-CCCCCCCCCCCCCC Q lcl|Aclame:pro 393 AGGDRLLVNGNMLPIDMAGQAY-LKGGDTNGEVSKEG 428 (432) Q Consensus 393 ~~gd~~~~~~n~~~~~~~~~~~-~~gg~~~~~~~~~~ 428 (432) ||||++++++|++|++..++.+ .+||+.++...++. T Consensus 367 ~ggd~~~~~~n~~pl~~~~~~~~~k~ge~~~~~~~~~ 403 (403) T protein:vir:80 367 EGLSELVILENYIPLDKIGDQNKLKGGEKGGADGQTD 403 (403) T ss_pred CCCCeEeecccccchhhccchhhccCCCCCCCCCCCC Confidence 9999999999999998766544 56666554332222 No 46 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=5.2e-86 Score=488.12 Aligned_cols=378 Identities=20% Similarity=0.195 Sum_probs=315.3 Q ss_pred CchHHHHHHhcccc---------------------ccccccccccCCchHHHHHhhc-----CCcCcccccHHHHhccHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFE---------------------KRQTSQVIELNKDDEKLLEWLG-----ISPSTISVKGKNALKVAT 54 (432) Q Consensus 1 Mg~~~~l~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~v~~~~a~~~~~ 54 (432) ||||++++++.... ++.................|.| .+.+...++.+.++++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~ 80 (409) T protein:vir:83 1 MGFWSNLFGIPSIPDLPNDNGPVDYNPGDPDMVEFRGPEEEPEARALPWIRPTAWSGYPESWATPSWGSAQDKLRTLIDV 80 (409) T ss_pred CchhhhhcccccCCCcccccccccccCCCCceeeccCCCcchhhhhcccccccccccccccccccCccccchhhHhhhHH Confidence 99999998851100 0101111000010111112221 234566789999999999 Q ss_pred HHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE-eeCCCCceE Q lcl|Aclame:pro 55 VFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI-EFDRKGKVQ 133 (432) Q Consensus 55 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~-~~~~~g~~~ 133 (432) ||+||++||++||++|+++++.++. .+.+.++|+.+||++||+++||+.++.++++ ||+|+++ .++..|.+. T Consensus 81 v~acV~~Ia~~iA~lpl~~~~~~~~------~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~ 153 (409) T protein:vir:83 81 AWACIDLNASVLSSMPIYRMRNGRI------IDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPI 153 (409) T ss_pred HHHHHHHHHHhhccCceEEeeCCcc------ccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEE Confidence 9999999999999999999975432 2456678999999999999999999999887 9999975 578889999 Q ss_pred EEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 ALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFIN 213 (432) Q Consensus 134 ~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 213 (432) +|+|++|..|++..+.++. .+|.+. + ...+++|||+|.+++.++.+|+||+..+...+.+..++++++. T Consensus 154 ~L~pl~p~~v~v~~~~~g~------~~y~~~--~---~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~ 222 (409) T protein:vir:83 154 RFRVVPPWLVNVELKKGAR------REYRIG--G---LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQ 222 (409) T ss_pred EEEEECCcceEEEEcCCce------EEEEEc--c---ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHH Confidence 9999999999998876532 223332 2 2356899999988888999999999999999999999999999 Q ss_pred HHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceee-ecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 214 NFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ-PISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 214 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~-~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) ++|+||++|+|++++++.+++++.++++++|++.++| |+|+++++.+|+++. ++++++.|+|++|.+++++++||++ T Consensus 223 ~~f~nga~p~gil~~~~~ls~e~~~~~~~~~~~~~~~--nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~ 300 (409) T protein:vir:83 223 NLAETGGVPLYWLGVERRLSETEAVDLMDRWIESRSK--YAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAIL 300 (409) T ss_pred HHHhcCCCcceEeecCCCCCHHHHHHHHHHHHHhhCC--ccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHH Confidence 9999999999999999999999999999999998875 789999999999974 6899999999999999999999999 Q ss_pred hcCChhhccCcc---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLS---KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY 369 (432) Q Consensus 293 ~gvp~~~l~~~~---~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 369 (432) |||||++||..+ +.+|+|.|++...|++.||.|+++.||++|++++|.. +.+++||.+.|++.|.+++++.+ T Consensus 301 fgVPp~llg~~~~~~~~tysn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~-----~~~~~f~~~~llr~d~~~r~~~~ 375 (409) T protein:vir:83 301 LGVPPFLVGLPGATGSLTYSNIEQLFSFHDRSSLRPKATAVMAALDRWALPS-----PQHLELNRDDYTRPSLVERATAY 375 (409) T ss_pred hCCCHHHccCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CcEEEeehhhhhccCHHHHHHHH Confidence 999999998644 3478999999999999999999999999999999865 45789999999999999999999 Q ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCC Q lcl|Aclame:pro 370 RTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 370 ~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~ 420 (432) ++++++|+||+||+|+++||||++|||++- . |++ T Consensus 376 ~~~~~~G~lT~NE~R~~~glpp~~ggd~l~--~---------------~gv 409 (409) T protein:vir:83 376 KIMIEAGVMEPNEARAMERLHSEAAAVRLS--G---------------GGV 409 (409) T ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCCcccC--C---------------CCC Confidence 999999999999999999999999999772 1 111 No 47 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=3.7e-85 Score=483.46 Aligned_cols=394 Identities=22% Similarity=0.241 Sum_probs=325.6 Q ss_pred CchHHHHHHh-----cccccccccc--cc--cc-----CCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIVDSVKKF-----FNFEKRQTSQ--VI--EL-----NKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~~~l~~~-----~~~~~~~~~~--~~--~~-----~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~i 66 (432) |..++.+++. |+.++..... .. .. ....+.+..+++.. ....++++++|++||++||++| T Consensus 1 ~~~~~~~~~~~~m~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~cI~~ia~~i 74 (413) T protein:vir:96 1 MPGVSEIRKDKNLKFFNNKRSPTEESKAKDEIPKAPQVVMTLPNFFKELISD------GYTKLSDSPEVRMAVDCIADLV 74 (413) T ss_pred CCccchhhhhhcCCccccCCCcchhhhhhccccccccccccchhhHhhhccc------hhHHHhhchHHHHHHHHHHHhh Confidence 6666655443 2222111000 00 00 01111222222211 1234778999999999999999 Q ss_pred ccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC-ceEEEEEEcCcceEE Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-KVQALWPIDASKVTV 145 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g-~~~~l~~~~~~~v~~ 145 (432) |++||+++++++++.+ ..+|+++++|+.+||++|++++||+.++.+++++||+|++++++..| .+.+|+|++|.+|++ T Consensus 75 a~~~~~~~~~~~~~~~-~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~ 153 (413) T protein:vir:96 75 SNMTIQLMQNGETGDK-RIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTF 153 (413) T ss_pred ccCceEEEEecCCCcc-ccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEE Confidence 9999999998887754 45799999999999999999999999999999999999999999887 578999999999999 Q ss_pred EEcCccceeccceeEEEecccCceEEEccceEEEEec-CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcce Q lcl|Aclame:pro 146 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKG 224 (432) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 224 (432) ..+... ..|.+..++ ..++++||||||. +++.++++|.||+.++...+.+..+++++..++|+||++|+| T Consensus 154 ~~~~~~-------~~y~~~~~~--~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~g 224 (413) T protein:vir:96 154 NVSDDD-------LDYSITFDN--KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNL 224 (413) T ss_pred EEcCCe-------EEEEEeecC--cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccE Confidence 876542 233444444 4689999999995 456678899999999999999999999999999999999999 Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCc-eeeec-CCChhHHHHHHHHHHHHHHHHHHhcCChhhccC Q lcl|Aclame:pro 225 LVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGY-QFQPI-SLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~-~~~~~-~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~ 302 (432) +++++..+++++.++++++|++.++|..|+|+++++++|. ++.++ ++++.|+|++|.+++++++||++|||||.+||. T Consensus 225 il~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 304 (413) T protein:vir:96 225 IVSVDSDSDELSDEEGRENFEEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGV 304 (413) T ss_pred EEEeCCCCCHHHHHHHHHHHHHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCC Confidence 9999999999999999999999999999999999986654 55555 568999999999999999999999999999975 Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 303 LSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNE 382 (432) Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE 382 (432) . ++.+++...|++.||.|+++.|+++|+++++.+ +++++||.+.+++.|.+++++++.+++++|++|+|| T Consensus 305 ~-----~~~~~~~~~~~~~~l~P~~~~ie~~ln~~ll~~-----~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE 374 (413) T protein:vir:96 305 G-----TYNKDEFNNFINTKIMSIAQVIQQTYNKLIVEE-----DMYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNE 374 (413) T ss_pred C-----cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHH Confidence 3 245788899999999999999999999998764 678999999999999999999999999999999999 Q ss_pred HHHHhCCCCCCCcceeeeccccccccccccc-cCCCCCC Q lcl|Aclame:pro 383 ARSKEDLPPEAGGDRLLVNGNMLPIDMAGQA-YLKGGDT 420 (432) Q Consensus 383 ~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~-~~~gg~~ 420 (432) +|+++|+||+||||++++++|++|++..+.. ..++||+ T Consensus 375 ~R~~~g~~p~~~gd~~~~~~n~~~~~~~~~~~~~~~~dt 413 (413) T protein:vir:96 375 FRNWVGMPPDAEMDDLLVLENYLQQKDLVNQKKLIQDET 413 (413) T ss_pred HHHHhCCCCCCCcceeeecccccchhhcccccCCCCCCC Confidence 9999999999999999999999999876543 3333333 No 48 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=2.3e-85 Score=484.55 Aligned_cols=402 Identities=18% Similarity=0.258 Sum_probs=321.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |+= .+..... ...|. ..+...++.+.++++++||+||++||++||++||++++.++ T Consensus 1 ~~~------------------~~~~~g~--~~~~~--~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~~-- 56 (723) T protein:vir:94 1 MTT------------------FPSGAGG--WNAWS--ADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPDG-- 56 (723) T ss_pred Ccc------------------cccCCCc--ccccc--ccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCCC-- Confidence 111 1111000 01122 23445577788999999999999999999999999986543 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC---CCceEEEEEEcCcceEEEEcCccce--ec Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWPIDASKVTVYIDDVGLL--NS 155 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~~~~~~v~~~~~~~~~~--~~ 155 (432) +....|+++++|+.+||++||+++||+.++.+++++||+|+++.+++ .|.+.+|+|++|..+.+........ .. T Consensus 57 -~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~ 135 (723) T protein:vir:94 57 -ELDELHPLSQLWNVMPNRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQA 135 (723) T ss_pred -ccchhhHHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceee Confidence 23457999999999999999999999999999999999999999754 4889999999998887765443322 11 Q ss_pred cceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHH Q lcl|Aclame:pro 156 KTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNED 235 (432) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 235 (432) ....|.....+|....++++||||||.+++.++++|+||+..+..++....++++++.++|+||++|+|+++.+ .++++ T Consensus 136 ~~~~y~~~~~~G~~~~~~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~-~l~~e 214 (723) T protein:vir:94 136 QIIGYVIERTDGVRVPVLADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG-DMDEQ 214 (723) T ss_pred eeeEEEEEecCceeEEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC-CCCHH Confidence 22223344567888899999999999888899999999999999999999999999999999999999999986 58999 Q ss_pred HHHHHHHHHHHHhcccccccceeecC----------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMP----------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~----------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) +.++++++|++.++|..|+|+++||+ .|++|+++++++.|+||+|.+++++++||++|||||.+|++ . T Consensus 215 ~~~~~~~~~~~~~~G~~Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~--~ 292 (723) T protein:vir:94 215 TFTKTVAAFRSQVEGVQNAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLG--G 292 (723) T ss_pred HHHHHHHHHHHHhhchhhcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCC--C Confidence 99999999999999999999999986 58999999999999999999999999999999999999864 4 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 306 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 306 ~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) ++++|.+++.+.|+++||.|+++.|+++|+++++...+ ..++++||...+++.|.+++++.+.+++++|++|+||+|+ T Consensus 293 st~sN~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~g--~~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~ 370 (723) T protein:vir:94 293 STYENQAEAKAAVWTETLIPQMEVMASITDLQLLPDIG--WTVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRA 370 (723) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--CceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 58899999999999999999999999999999986532 3467788888899999999999999999999999999999 Q ss_pred HhCCCCCCCcce--eeecc--ccccccccccccCCC-------------CCCCCCCCCC---------CCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDR--LLVNG--NMLPIDMAGQAYLKG-------------GDTNGEVSKE---------GNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~--~~~~~--n~~~~~~~~~~~~~g-------------g~~~~~~~~~---------~~e~~ 432 (432) ++||||+||||. ++.|. +++|.+.+......+ .+...+.+.+ +.+.+ T Consensus 371 ~lglpPi~gGd~~~~~~p~~~~~a~~~~~~p~~~e~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 443 (723) T protein:vir:94 371 TIGLDPLPGGIGQMTLTPYRAQFAPAPAPAPAVEEGAARMLALLERVAADRPLPELPVRATTVLHHDPGPDPQ 443 (723) T ss_pred HhCCCCCCCCcccceeccccccccCCCCCCccchhhhHhhhhhccccccccCcCCCCCCCCCCCCCCcccCCc Confidence 999999999884 34543 444443322111111 0011111111 01111 No 49 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=5.4e-84 Score=477.08 Aligned_cols=396 Identities=17% Similarity=0.157 Sum_probs=329.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++.++. ....+..++.+..+++.+.+...|+.+.||++++|++||++||++||++|+++ T Consensus 1 M~~f~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~v~~ia~~ia~~p~~~------- 63 (397) T protein:vir:38 1 MPLLKLNKSH----------SQGFSLNDPDWVNFLTGGEAQKYVSADTALKNSDIFSLIMQLSGDLAMVRYTS------- 63 (397) T ss_pred Ccchhhhhcc----------cCcccCCchhhhhhhcCCcCCceechHHhhccHHHHHHHHHHHHHHhhCcccc------- Confidence 9999876321 11222223445566666667778999999999999999999999999999964 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .|+..++|+.+||++|++++||+.++.+++++||||++++++..|.+.+|+|++|.+|++..+.++.... .... T Consensus 64 -----~~~~~~~l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~-y~~~ 137 (397) T protein:vir:38 64 -----ESDRSQSIISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLI-YNIN 137 (397) T ss_pred -----cccHHHHHHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEE-EEEE Confidence 2566778889999999999999999999999999999999999999999999999999998876532111 1111 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) +....++..+.|+++||||++++++.+..+|.||+.++...+....++.++..++|+||+.|+++++.+..+++++.+++ T Consensus 138 ~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~ 217 (397) T protein:vir:38 138 FDEPAIGYMENVPAADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRI 217 (397) T ss_pred eccccccceeEecCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHH Confidence 22234566788999999999998888889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT 320 (432) Q Consensus 241 ~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~ 320 (432) ++.|+..+++ .|+|+++|+++|++|++++.++.|+|+++.+++.+++||++|||||.+|++.+..+ ++.++ ...|+. T Consensus 218 ~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~~-~~~e~-~~~~~~ 294 (397) T protein:vir:38 218 ARSKEISKQI-HNSDGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQQ-SSITQ-ISGQYA 294 (397) T ss_pred HHHHHHHhcc-cccCCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc-cHHHH-HHHHHH Confidence 9999988766 68999999999999999999999999999999999999999999999999876544 56654 467889 Q ss_pred HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Q lcl|Aclame:pro 321 DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLV 400 (432) Q Consensus 321 ~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~ 400 (432) .||.|+++.|+++|+++++.+. +|++..+++.|.+++++.+++++++|++|+||+|+++|++|+++||.+.. T Consensus 295 ~~l~P~~~~ie~~ln~~l~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~ 366 (397) T protein:vir:38 295 KSLNRYVQAIVGELNDKLHANI--------SANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGYLAKDLPDP 366 (397) T ss_pred HHHHHHHHHHHHHHHHhccChh--------cccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCccccc Confidence 9999999999999999998753 34555567889999999999999999999999999999999999996654 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .....+. .+....++|+.+++.+++.+++. T Consensus 367 ~~~~~~~--~~~~~~~~g~~~~~~~~e~~~~~ 396 (397) T protein:vir:38 367 EKEPQQA--IQLIQQEGGENDGNNSDERGSDP 396 (397) T ss_pred ccccccc--ccccccccCCCCCCCCCCCCCCC Confidence 4433332 23345556666555555555445 No 50 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=1.2e-83 Score=475.24 Aligned_cols=391 Identities=18% Similarity=0.246 Sum_probs=323.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||++||....++.++......+.+. .+......+.+.++++++|++||++||+.||++|++++++.... T Consensus 1 mg~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~ 70 (403) T protein:vir:10 1 MGFKSWITEKLNPGQRIIRDMEPVSH----------RTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIV 70 (403) T ss_pred Ccchhhhhhccchhhhhhhccccccc----------ccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeeccccc Confidence 99999998777644433222222211 11111124568889999999999999999999999998765432 Q ss_pred --ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 81 --IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 81 --~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) ......|+++++|+.+||++||+++||+.++.+++++||+|+++.+ .+|+++++..|++..+...... T Consensus 71 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~~~~---- 140 (403) T protein:vir:10 71 TYANGVKTKTLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANKFIK---- 140 (403) T ss_pred ccccccccchHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCceEE---- Confidence 2334578999999999999999999999999999999999998753 3689999999999877653221 Q ss_pred eEEEecccCceEEEccceEEEEecC----CCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNG----ITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~----~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) +....+ ...+++++|+|++.. .+.++.+|+||+.++...+....+++++..++|+||++|+++++.++.+++ T Consensus 141 --~~~~~~--~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~ 216 (403) T protein:vir:10 141 --KFIFNN--QINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNK 216 (403) T ss_pred --EEEecC--ceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Confidence 112222 246889999999944 345788999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHhcccccccceeecCCCceeeecCC--ChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL--NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE 312 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~--~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~ 312 (432) +++++++++|++.++|..|+|++++|++|++|+++++ ++.|+|++|.+++++++||++|||||.+|+. ++++|.+ T Consensus 217 e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~---~~~sn~e 293 (403) T protein:vir:10 217 KLRERKQEELQLDYNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG---GNNANIR 293 (403) T ss_pred HHHHHHHHHHHHHhCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC---CCCcCHH Confidence 9999999999999999999999999999999999875 5789999999999999999999999999975 3678999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhh--hhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Q lcl|Aclame:pro 313 QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI--LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLP 390 (432) Q Consensus 313 ~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l--~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~ 390 (432) ++.+.|+++||.|+++.|+++|++++ +.++.||++.+ ++.|.+++++++.+++++|++|+||+|+++|+| T Consensus 294 ~~~~~f~~~tl~P~~~~ie~~l~~~L--------~~~~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~ 365 (403) T protein:vir:10 294 PNIELFYYMTIIPMLNKLTSSLTFFF--------GYKITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLE 365 (403) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--------CceeeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Confidence 99999999999999999999999876 23567777755 888999999999999999999999999999999 Q ss_pred CCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 391 PEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 391 p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+| +||++++|+|+..... ..++|+.. .++.++||| T Consensus 366 pi~~~~~d~~~~p~n~~~~~~----~~~~~e~~--~~~~~~~g~ 403 (403) T protein:vir:10 366 PLDDEQMNKIRIPANVAGSAT----GVSGQEGG--RPKGSTEGD 403 (403) T ss_pred CCCcccccccccccccccccc----cCCCCcCC--CCCCCcCCC Confidence 995 7999999999865432 23344433 346677777 No 51 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=2.5e-83 Score=473.40 Aligned_cols=417 Identities=16% Similarity=0.177 Sum_probs=319.1 Q ss_pred CchHH--H-HHHh--ccccccccccccccCCchHHHHHhhc-----------C-CcCcccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVD--S-VKKF--FNFEKRQTSQVIELNKDDEKLLEWLG-----------I-SPSTISVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~--~-l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~-~~~~~~v~~~~a~~~~~v~~~i~~ia 63 (432) .=||+ + ||+- ..+.++..++ +...++.+.+ + ......++...++++++|++||++|| T Consensus 62 ~~~~~~~~~~kk~~i~~pfkkk~~~------~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA 135 (945) T protein:vir:10 62 IIIFRKNQVLKKEKIIVPYNHQEPP------FKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIP 135 (945) T ss_pred eeeehhhhHHHhhcccccccccccc------hhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHH Confidence 22221 1 1110 0111111110 0011111111 0 01123467888999999999999999 Q ss_pred HhhccCceEEEeecCCcc------eeeccchhHHhhhccccccCCHHH----HHHHHHHHHHhcCCeEEEEeeCCCCceE Q lcl|Aclame:pro 64 ESVSKLPLKIYQEDEYGI------QRGTKHYLNNLLRLRPNPYMSSMN----FFGSLEAQKNLYGNSYANIEFDRKGKVQ 133 (432) Q Consensus 64 ~~ia~~~~~~~~~~~~~~------~~~~~~~~~~lL~~~pn~~~~~~~----f~~~~~~~~l~~G~~~~~~~~~~~g~~~ 133 (432) ++||++|+++|++.++|. +....|+++.+|+ +||++|++++ |++.++.+++++||+|++++|+..|.+. T Consensus 136 ~sIAsLPlklYrr~edG~~~~~~kk~~~~hpL~~LL~-rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii 214 (945) T protein:vir:10 136 KKLTSKELEIYKHIEDKHVNYYLKRIRDARNILEFLE-RPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLV 214 (945) T ss_pred hhhccCceEEEEecccCcccccccccccchHHHHHHh-CCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEE Confidence 999999999999877763 3456789999886 9999999998 5566889999999999999999999999 Q ss_pred EEEEEcCcceEEEEcCccceeccceeEEEeccc-CceEEEccceEEEE-ecCCCCCc--ccccCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 ALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTG-GQQRVLKPEEILHF-KNGITLDG--LVGVPTMEYLKSTLENSASAD 209 (432) Q Consensus 134 ~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vih~-~~~~~~~~--~~G~s~~~~~~~~~~~~~~~~ 209 (432) +|+|++|.+|++..+.++.. ..+|.+..+ +....++++++||+ +++.+.+. .+|+||+.++.+.+....+++ T Consensus 215 ~L~pLdPs~Vti~~ddDG~~----~y~Yv~~idG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAae 290 (945) T protein:vir:10 215 AITPVDGTTIKPILSEDTGI----VVGYVQEVDGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFID 290 (945) T ss_pred EEEEECCcceEEEEcCCCcE----EEEEEEecCCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHH Confidence 99999999999988775432 222333334 44456888887755 54444432 369999999999999999999 Q ss_pred HHHHHHHh-ccCCcceEEEeC----------CCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHH Q lcl|Aclame:pro 210 KFINNFYK-QGLQVKGLVQYV----------GDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQF 278 (432) Q Consensus 210 ~~~~~~~~-n~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~ 278 (432) ++++++|. ||++|+|++.++ ..+++++.+++++.|++.++| .++|+++++++|++|+++++++.|+|+ T Consensus 291 k~aar~FskNGa~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG-~NnG~piVLdeGmef~pLs~s~~DaQf 369 (945) T protein:vir:10 291 KGNLDYYRKGGSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMG-DYTQVPILSGGKFTWIDFKGKRRDMQF 369 (945) T ss_pred HHHHHHHHhCCCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCC-cccccceecCCCceEEEccCChhHHHH Confidence 99999995 788999999865 456899999999999999998 467889999999999999999999999 Q ss_pred HHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhh Q lcl|Aclame:pro 279 LENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL 358 (432) Q Consensus 279 ~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~ 358 (432) ++++++++++||++|||||.+||..+..++++.+++...|+++||.|++..|+++||++++.... +..+.|+++.+. T Consensus 370 LEsrkfs~eeIArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~e---g~~i~fdFd~ld 446 (945) T protein:vir:10 370 KELAEFVARKICAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRN---EKDIKLWFKEDD 446 (945) T ss_pred HHHHHHHHHHHHHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CceeEEEecchh Confidence 99999999999999999999999999999999999999999999999999999999998764432 334555556666 Q ss_pred hhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecc-cccccccccc-----------------ccCCCCCC Q lcl|Aclame:pro 359 RADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG-NMLPIDMAGQ-----------------AYLKGGDT 420 (432) Q Consensus 359 ~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~-n~~~~~~~~~-----------------~~~~gg~~ 420 (432) ..|.+++++.+.+++++|+||+||+|+++|+||+||||+++++. |+.|.+.... +..+||+. T Consensus 447 l~D~ksraEal~kli~sGiLTiNEvRe~lGLpPIeGGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~kGGe~ 526 (945) T protein:vir:10 447 LEKERDWWNIIQGQLNTGFRSINEARMEKGLEPVPWGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQQGGGV 526 (945) T ss_pred ccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccccCCCCcccccCCCCCCCCCCCCC Confidence 77899999999999999999999999999999999999999887 4556543221 11222332 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 421 NGEVSKEGNEGN 432 (432) Q Consensus 421 ~~~~~~~~~e~~ 432 (432) +++.+.+++.++ T Consensus 527 dEns~~psE~kd 538 (945) T protein:vir:10 527 DENSSVPSEQKN 538 (945) T ss_pred CCCCCCCCcccc Confidence 322222222222 No 52 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=6.4e-84 Score=476.66 Aligned_cols=346 Identities=26% Similarity=0.442 Sum_probs=312.9 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEE Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 145 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~ 145 (432) ||++|++++++++ ..+||++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++ T Consensus 1 ia~lp~~~~~~~~-----~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l~~~~v~~ 75 (348) T protein:vir:93 1 MASLPLKMYEDYK-----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (348) T ss_pred CcccceEeEecCc-----CcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCCceEE Confidence 9999999998654 34699999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 146 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) ..+.... ...|.....+|..+.|+++||||+|++++.++.+|+||+..+..++.+..+++++... .++..++++ T Consensus 76 ~~~~~~~----~~~y~~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~i 149 (348) T protein:vir:93 76 LIENQSR----ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLT--EMQKPDSFM 149 (348) T ss_pred EEeCCCc----EEEEEEEcCCCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHH--hcCCCceeE Confidence 8876422 2223344566777889999999999888889999999999999999999999888643 444456788 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 226 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) ++.+..+++++.++++++|++.+. |+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|+..++ T Consensus 150 ~~~~~~l~~e~~~~~~~~~~~~~~---n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~ 226 (348) T protein:vir:93 150 LKYGSNVSTEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSN 226 (348) T ss_pred EecCCCCCHHHHHHHHHHHHHHhh---cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC Confidence 888999999999999999999874 57899999999999999999999999999999999999999999999999999 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 306 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 306 ~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++++.+++.+.|+++||.|+++.|+++|++++|++.++..+++++||.+.+++.|.+++++.+.+++++|++|+||+|+ T Consensus 227 ~~~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~ 306 (348) T protein:vir:93 227 TNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIRE 306 (348) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHH Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeecccccccccccccc--CCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAY--LKGGDTNGEVS 425 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~--~~gg~~~~~~~ 425 (432) ++|+||+||||++++++|++|++.+.+.+ .+||++++++. T Consensus 307 ~~g~~p~~ggD~~~~~~n~~~~~~~~~~~~~~~gg~~n~~~~ 348 (348) T protein:vir:93 307 WEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES 348 (348) T ss_pred HhCCCCCCCcCeEeecccccccccchhhcccccCCCCCcCCC Confidence 99999999999999999999998776554 45666555544 No 53 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=2.6e-82 Score=467.82 Aligned_cols=384 Identities=17% Similarity=0.254 Sum_probs=310.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc--CCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) ||||+||++++.... . . .. .+..+++ .+.+...++.+.++++++|++||++||++||++||+++++++ T Consensus 1 MGl~~~~~~~~~~~~---~-~---~~---~~~~~~~~~~~~~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g 70 (394) T protein:vir:62 1 MGLRDRFSNYLFKKA---E-K---RG---YLDNVLGKSIRYSGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFG 70 (394) T ss_pred CchhhhhhhhccCCC---C-c---hh---hhhhhhhcccccCccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCC Confidence 999999987643111 1 1 11 1222232 334556789999999999999999999999999999997644 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 158 (432) + ...+|+++.|+ .+||++||+++||+.++.+++++||+|+++.++..+.+ ..+++..++.. . T Consensus 71 ~---~~~~~~~~~Ll-~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~~~--------~~~~~~~~~~~------~ 132 (394) T protein:vir:62 71 N---EIKDDIALQIL-RNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIHLA--------SNVFTELDDNL------V 132 (394) T ss_pred c---ccchhhHHHHh-ccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceeecc--------ccceEEECCce------E Confidence 2 34568887665 69999999999999999999999999999876543322 34455554432 1 Q ss_pred eEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC--HHH Q lcl|Aclame:pro 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN--EDA 236 (432) Q Consensus 159 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~ 236 (432) +.+..++ +.|++++|||+|++ +.++++|.||+..+..++....++++++.++|+||++|+++++++...+ +++ T Consensus 133 --~~~~~~~--~~~~~~eiih~r~~-~~d~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~ 207 (394) T protein:vir:62 133 --EHFNIGG--HEIPPCMIRHVKNI-GADHLRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGA 207 (394) T ss_pred --EEEeeCC--EEechhheEEecCc-CCCCccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHH Confidence 1222233 57999999999965 4678999999999999999999999999999999999999999998775 556 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCc--eeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGY--QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~--~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) .+++++.|.++++|..|+|+++|++.|. ++++++.++.|+|++|.+++++++||++|||||.+|++. +++|.+++ T Consensus 208 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~---~~sn~e~~ 284 (394) T protein:vir:62 208 QSKLINAILDQLESIDEARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTEL---IKEDIEKA 284 (394) T ss_pred HHHHHHHHHHHhccccccCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCC---CCcCHHHH Confidence 7899999999999999999999987766 666889999999999999999999999999999999854 56789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC-- Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE-- 392 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~-- 392 (432) .+.|+++||.|++++|+++|++++|.+.+. .+++++||...++.. .++++++.+++++|+||+||+|+++|+||+ T Consensus 285 ~~~~~~~~l~P~~~~ie~~l~~kll~~~~~-~~~~~~fd~~~~~~~--~~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~ 361 (394) T protein:vir:62 285 MMYIHNKAVRPIMKNFEDHLSLLFYAQNSG-KRIKFKINILDFVTY--SNKTNIGYNLVRTAITSPDNVADMLGFPKQNT 361 (394) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCcccc-CceEEEechhhhcCH--HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 999999999999999999999999987664 457778877777654 467888999999999999999999999998 Q ss_pred CCcceeeeccccccccccc--cccCCCCCCCCC Q lcl|Aclame:pro 393 AGGDRLLVNGNMLPIDMAG--QAYLKGGDTNGE 423 (432) Q Consensus 393 ~~gd~~~~~~n~~~~~~~~--~~~~~gg~~~~~ 423 (432) ++||++++++|++|++... +.+.+||++++. T Consensus 362 ~~gd~~~~~~n~~~~~~~~~~~~~~kgge~~en 394 (394) T protein:vir:62 362 KESQAIYISNDVTEIGKKEATDGSLGGGEENEN 394 (394) T ss_pred CCCCeeecccccccccccccccccCCCCCCCCC Confidence 6899999999999887532 223334443332 No 54 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=5.1e-80 Score=455.31 Aligned_cols=427 Identities=18% Similarity=0.185 Sum_probs=321.3 Q ss_pred CchHHHHHHhcccccc--------------cccccc-ccCCch------------HHHHHhhcCCcCcccccHHHHhccH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR--------------QTSQVI-ELNKDD------------EKLLEWLGISPSTISVKGKNALKVA 53 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~--------------~~~~~~-~~~~~~------------~~~~~~~g~~~~~~~v~~~~a~~~~ 53 (432) |++-+--+...+.+.. +..+.. ....+. ..+...+.....+..+...-.++.. T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iv~~~i~~~~~ 106 (574) T protein:vir:80 27 MHLREIDTNVVNNEPYSMESIEKGMNGKTTAYMQPIIGEMSVNPGYKTKPSIRNSQDLHKTLKKFGNNIILNAIINTRSN 106 (574) T ss_pred cccchhhhhhhhccCCCHHHHHHhHhhhcccccchhhhhccccccccCcCccCCcccHHHHHHhhccChhHHHHHHHHHH Confidence 5554432222221110 000000 000000 0011111111111112222334566 Q ss_pred HHHHHHHHHHHhhccCceEEEeecCCc----ceeeccchhHHhhhc---ccccc-CCHHHHHHHHHHHHHhcCCeEEEEe Q lcl|Aclame:pro 54 TVFACIKILSESVSKLPLKIYQEDEYG----IQRGTKHYLNNLLRL---RPNPY-MSSMNFFGSLEAQKNLYGNSYANIE 125 (432) Q Consensus 54 ~v~~~i~~ia~~ia~~~~~~~~~~~~~----~~~~~~~~~~~lL~~---~pn~~-~~~~~f~~~~~~~~l~~G~~~~~~~ 125 (432) .|++|+.+|+..+|++||+|+.++.++ ++....|+++.+|.. .|||+ +++.+||+.++.+++++||+|++++ T Consensus 107 ~V~~~~~~i~~~ia~lp~~i~~kd~~~~~~~~~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gnayi~i~ 186 (574) T protein:vir:80 107 QVSMYCKPARNSETGVGYEIRLKDIEAEPTSHDIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQVNFEKV 186 (574) T ss_pred HHHHHHHHHHhhhccCceEEEEeccCCCccchhhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCeEEEEE Confidence 788888899999999999999876653 334567899888864 35555 4888999999999999999999999 Q ss_pred eCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCC---cccccCHHHHHHHHH Q lcl|Aclame:pro 126 FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLD---GLVGVPTMEYLKSTL 202 (432) Q Consensus 126 ~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~---~~~G~s~~~~~~~~~ 202 (432) ++..|.+.+|+|++|.+|++..+..+........||.+..++....|+++||||+++++..+ +.||+||+.++...+ T Consensus 187 r~~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~~~y~~~~~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi~~a~~~i 266 (574) T protein:vir:80 187 FDKDGNFIKFDTVDPTTIFLATNGEGKLIKNGERFVQVIDNRIVAKFNERELAFAVRNPRADIEVGQYGYPELEIALKQF 266 (574) T ss_pred ECCCCcEEEEEEEcCceeEEEEcCccccccCceEEEEEeCCceEEEEccccEEEEeccCCCCcccccccccHHHHHHHHH Confidence 99999999999999999999998877666666677777788888899999999999665443 568999999999999 Q ss_pred HHHHHHHHHHHHHHhccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccce-eecCCCceeeecCCChhHHHHH Q lcl|Aclame:pro 203 ENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQFQPISLNMSDAQFL 279 (432) Q Consensus 203 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~~~~ 279 (432) ..+.++++++.++|+||++|+|+|+++. .+++++++++++.|.+.++|..|+|++ +++++|++|+++++++.|+||+ T Consensus 267 ~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~ls~e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s~~D~qfl 346 (574) T protein:vir:80 267 IAHENTEVFNDRFFSHGGTTRGILHVKTGQQQSQQALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPSANDMQFE 346 (574) T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEEccCChhHHHHH Confidence 9999999999999999999999999864 479999999999999999999999996 4557899999999999999999 Q ss_pred HHHHHHHHHHHHHhcCChhhccCccc----------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhh Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFY 349 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~~~~~----------~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~ 349 (432) |++++++++||++|||||.+||..+. .+++|.+++.+.|++.||.|++..|+++|+++++...+ .+++ T Consensus 347 e~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~--~~~~ 424 (574) T protein:vir:80 347 KWLNYLINVISALYGIDPAEINFPNNGGATGSKGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEFG--EKYQ 424 (574) T ss_pred HHHHHHHHHHHHHhCCCHHHhcccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC--CceE Confidence 99999999999999999999987554 36799999999999999999999999999999986543 5678 Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCC------------- Q lcl|Aclame:pro 350 SKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLK------------- 416 (432) Q Consensus 350 ~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~------------- 416 (432) ++|+..++...+... .+.+++.+||||+||+|+++||||+||||++++|.|+.+++...+.... T Consensus 425 ~~f~~~d~~~~~~~~---~~~~~~~~G~lT~NE~R~~lgl~Pi~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (574) T protein:vir:80 425 FQFRGGDLSAQLDKL---KIIEQEGKVFRTVNEIRHDKGLEPIKGGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNRLL 501 (574) T ss_pred EEecccchhhHHHHH---HHHHHHhCCccCHHHHHHHhCCCCCCCCCEeeeccceeecccccccccCCccchhccccccc Confidence 888877765444322 2345778999999999999999999999999999999988754322111 Q ss_pred --CCCCCC-----CCCCCCCCCC Q lcl|Aclame:pro 417 --GGDTNG-----EVSKEGNEGN 432 (432) Q Consensus 417 --gg~~~~-----~~~~~~~e~~ 432 (432) .+..++ +++....++. T Consensus 502 ~~~~~~~~~~~~~~p~~~~~d~~ 524 (574) T protein:vir:80 502 ELSGGDVEQPEPEEPKDSQNDTD 524 (574) T ss_pred cccCCCCCCCCCCCCCCcccccc Confidence 000011 1111111111 No 55 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=7.7e-80 Score=454.31 Aligned_cols=426 Identities=15% Similarity=0.151 Sum_probs=314.3 Q ss_pred CchHHHHHH-------hccccccccccccccCCchHH----------------------HHHhhcCCcCccc-----ccH Q lcl|Aclame:pro 1 MKIVDSVKK-------FFNFEKRQTSQVIELNKDDEK----------------------LLEWLGISPSTIS-----VKG 46 (432) Q Consensus 1 Mg~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~g~~~~~~~-----v~~ 46 (432) ||||++|+. ++.--.+.............. +...++..+...+ ... T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~a~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~ 84 (551) T protein:vir:80 5 LGLFESIRLVGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVL 84 (551) T ss_pred hhhHHHhhhccCChhhcccccccccceeeecccccHHHHHHhhccCcceeecccccceecCcccccCccccChhHHHHHH Confidence 999999983 111100100000000000000 0001111111111 112 Q ss_pred HHHhccHHHHHHHHHHHHhhcc-----------CceEEEeecCCcceee----ccchhHHhhhcccccc-----CCHHHH Q lcl|Aclame:pro 47 KNALKVATVFACIKILSESVSK-----------LPLKIYQEDEYGIQRG----TKHYLNNLLRLRPNPY-----MSSMNF 106 (432) Q Consensus 47 ~~a~~~~~v~~~i~~ia~~ia~-----------~~~~~~~~~~~~~~~~----~~~~~~~lL~~~pn~~-----~~~~~f 106 (432) +.+..+|+|++||+.||++||+ ++|.+..++.+..... ..+.+..+| .+||++ +|+.+| T Consensus 85 ~~~~~npiv~~~I~~ia~~IA~~~~~~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l-~~pn~~~~p~~~s~~~f 163 (551) T protein:vir:80 85 KKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFI-EKTGVDNDINRDSFSSF 163 (551) T ss_pred HHhhcCHHHHHHHHHHHHHHhhhhhhhhhhcCCCCceEEecccCcccChhHHHHHHHHHHHH-HhcCCCCCCccchHHHH Confidence 3445689999999999999997 4555544332221111 123344455 488887 488999 Q ss_pred HHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCC Q lcl|Aclame:pro 107 FGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL 186 (432) Q Consensus 107 ~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~ 186 (432) ++.++.+++++||+|++++++..|.+.+|+|++|.+|++..+.++........++.+..++....|++++|||+++++.. T Consensus 164 ~~~lv~dlll~Gnay~~i~rd~~G~~~~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~eiiH~~~n~~~ 243 (551) T protein:vir:80 164 VKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRS 243 (551) T ss_pred HHHHHHHHHhcCCEEEEEEECCCCcEEEEEEeCCceeEEEECCccccccCceEEEEEeCCcEEEEEcccceEEecccCCC Confidence 99999999999999999999999999999999999999999887765555555666666666778999999999966544 Q ss_pred ---CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhcccccccceeec- Q lcl|Aclame:pro 187 ---DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGLQNSHRIALM- 260 (432) Q Consensus 187 ---~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~n~g~~~vl- 260 (432) ++.+|+||+.++...+..+.++++++.++|+||++|+|+|+++.. +++++++++++.|++.++|..|+|+++++ T Consensus 244 ~~~~~~~G~spi~~a~~~i~~~~a~~~~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~ 323 (551) T protein:vir:80 244 DIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS 323 (551) T ss_pred CcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCcccccc Confidence 357899999999999999999999999999999999999998643 79999999999999999999999998665 Q ss_pred CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc----------cccccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMY 330 (432) Q Consensus 261 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~----------~~~~~~~~~~~~~~~~~l~P~~~~i 330 (432) ++|++|+++++++.|+||+|++++.+++||++|||||.+||..++ .|++|.+++...|++.||.|+++.| T Consensus 324 ~~g~~~~~l~~~~~D~qfle~~~~~~~~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~i 403 (551) T protein:vir:80 324 AEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFI 403 (551) T ss_pred CCCceEEEccCChhHHHHHHHHHHHHHHHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 689999999999999999999999999999999999999986543 3789999999999999999999999 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCcceeeeccccccccc Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDM 409 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p-~~~gd~~~~~~n~~~~~~ 409 (432) +++|+++|+...+ .+ +.|+++.+...+..++++.+. ++.+|+||+||+|+++|||| +||||+++.|.++.+++. T Consensus 404 e~~ln~~L~~~~~--~~--~~f~f~~~~~~~~~~~~~~~~-~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~ 478 (551) T protein:vir:80 404 EDFINKHIVAEFG--DK--YTFQFVGGDIKSELESVKILA-EKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQ 478 (551) T ss_pred HHHHHhhhccccC--Cc--eEEEeeccChhhHHHHHHHHH-HHhcCCcCHHHHHHHhCCCCCCCCCceeecccccccccc Confidence 9999999886532 33 445556777777777777654 66789999999999999998 799999999988776543 Q ss_pred cccccC----------------CCCCCCCCCCCCCC--------CCC Q lcl|Aclame:pro 410 AGQAYL----------------KGGDTNGEVSKEGN--------EGN 432 (432) Q Consensus 410 ~~~~~~----------------~gg~~~~~~~~~~~--------e~~ 432 (432) ..+... .+++.+.+++++.+ +.| T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 525 (551) T protein:vir:80 479 LMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVEDIPDGKDTTGDIGKD 525 (551) T ss_pred cccccCcchhhhhhccccccCcCCCCCCCCCCCCCCccccCCCcccc Confidence 221110 00011111111000 000 No 56 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=8e-80 Score=454.22 Aligned_cols=377 Identities=19% Similarity=0.236 Sum_probs=312.1 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++... ++ +..... ......+...++...+...++.+.|+++++|++||++||++||++||++++ T Consensus 1 Mg~~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~----- 69 (385) T protein:vir:10 1 MGLLTPRNFN----KR-KAKNMV-YPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVASAHFKTEN----- 69 (385) T ss_pred Cccccchhcc----cc-cccccc-cccchhhhhhhccccCccccCHHHhhccHHHHHHHHHHHHHHhhCceeeec----- Confidence 9999975321 11 111111 112223344444444556789999999999999999999999999999874 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) |+...+|+ +||++||+++||+.++.+++++||+|++++++ ..+++|+++.+|++..+.... .++ T Consensus 70 ------~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~~~~-----~~~ 133 (385) T protein:vir:10 70 ------TATLNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGI-----VYT 133 (385) T ss_pred ------cchhhhhh-cCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcCCce-----EEE Confidence 44556664 99999999999999999999999999999875 467899999999988776532 233 Q ss_pred EEecccCceEEEccceEEEEecCCC--CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGIT--LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAK 237 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~--~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~ 237 (432) +....++..+.|+++||||||+.++ .++.+|+||+.++..++....+++++..++|+||++|+|++++++.. ++++. T Consensus 134 ~~~~~~~~~~~~~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~ 213 (385) T protein:vir:10 134 VLESNDRPQMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDL 213 (385) T ss_pred EEEcCCceEEEEccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHH Confidence 4445666778899999999997544 45789999999999999999999999999999999999999999876 57899 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH-HHHHHHHHHHHHHhcCChhhccCcc--ccccccHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL-ENTELTIRQIATAFGIKMHQLNDLS--KATLNNIEQQ 314 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~-e~~~~~~~~I~~~~gvp~~~l~~~~--~~~~~~~~~~ 314 (432) +++++.|++.++| .|+|+++++++|++|++++.++.|+|++ |.+++++++||++|||||++|++.+ +.++++.+++ T Consensus 214 ~~~~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~ 292 (385) T protein:vir:10 214 ESAREEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQI 292 (385) T ss_pred HHHHHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHH Confidence 9999999999887 6899999999999999999999999975 9999999999999999999998754 5678898877 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) .. ++..||.|+++.|+++|+++++.+ +++||.+.+++.|.+++++.+.+++++|++|+||+|+++|++|+|+ T Consensus 293 ~~-~~~~~l~P~~~~ie~~l~~~l~~~-------~~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~ 364 (385) T protein:vir:10 293 KA-TYLANLNSYVNPIVDELRLKMNAP-------DLELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLP 364 (385) T ss_pred HH-HHHHHHHHHHHHHHHHHHHhhCCc-------eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCC Confidence 54 556799999999999999998754 4889999999999999999999999999999999999999999964 Q ss_pred --cceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 395 --GDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 395 --gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) +|.+.++.+. .+||+.+++ T Consensus 365 ~~~~~~~~~~~~----------~~~g~~~dn 385 (385) T protein:vir:10 365 DNLPEFKPLTTQ----------VKGGDEGDN 385 (385) T ss_pred CCCccccCcccc----------cCCCCCCCC Confidence 5666655553 345555444 No 57 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=4.6e-79 Score=450.06 Aligned_cols=386 Identities=16% Similarity=0.155 Sum_probs=308.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++. ++.. .... .......++.+.++++++|++||++||++||++|+++++++ T Consensus 1 Mg~f~~lf~~-----~~~~--~~~~-----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--- 59 (395) T protein:vir:95 1 MSILEKIFKT-----RKDI--TYML-----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--- 59 (395) T ss_pred Cchhhhhhcc-----Cccc--cccc-----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--- Confidence 9999998432 1111 0000 11223456778899999999999999999999999999743 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...+|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..++....... .... T Consensus 60 --~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~ 127 (395) T protein:vir:95 60 --RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKD 127 (395) T ss_pred --ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeE Confidence 2457999999999999999999999999999999999998775543 256666665555443221 1122 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKV 239 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ 239 (432) +.....+..+.++++||||+|++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.++ T Consensus 128 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~ 200 (395) T protein:vir:95 128 VTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEK 200 (395) T ss_pred EEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHH Confidence 2333444567899999999998888888999999999887776544 356788899999988765 58999999 Q ss_pred HHHHHHHHhcccccc-cceeecCCCceeeecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNS-HRIALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 240 ~~~~~~~~~~g~~n~-g~~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) +++.|++.+++..+. ..++++++|++|+++++++.++ |++|++++++++||++|||||++|++ ++++.++ T Consensus 201 ~~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~----~~sn~e~ 276 (395) T protein:vir:95 201 LQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG----ETADLEK 276 (395) T ss_pred HHHHHHHHhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC----cccCHHH Confidence 999999998875432 2355689999999999988765 89999999999999999999999963 7889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) +.+.|+++||.|++.+|+++|+++++.+.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+| T Consensus 277 ~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~ 354 (395) T protein:vir:95 277 NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSD 354 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999988776554 56889999999999999999999999999999999999999997 Q ss_pred Cc--ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 GG--DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 394 ~g--d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +| |++++|+|++|++.+.....++.+...+..++.+.|| T Consensus 355 ~g~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:95 355 NPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCCCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 65 9999999999998766555444444333333333344 No 58 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=4.6e-79 Score=450.06 Aligned_cols=386 Identities=16% Similarity=0.155 Sum_probs=308.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++. ++.. .... .......++.+.++++++|++||++||++||++|+++++++ T Consensus 1 Mg~f~~lf~~-----~~~~--~~~~-----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--- 59 (395) T protein:vir:10 1 MSILEKIFKT-----RKDI--TYML-----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--- 59 (395) T ss_pred Cchhhhhhcc-----Cccc--cccc-----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--- Confidence 9999998432 1111 0000 11223456778899999999999999999999999999743 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...+|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..++....... .... T Consensus 60 --~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~ 127 (395) T protein:vir:10 60 --RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKD 127 (395) T ss_pred --ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeE Confidence 2457999999999999999999999999999999999998775543 256666665555443221 1122 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKV 239 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ 239 (432) +.....+..+.++++||||+|++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.++ T Consensus 128 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~ 200 (395) T protein:vir:10 128 VTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEK 200 (395) T ss_pred EEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHH Confidence 2333444567899999999998888888999999999887776544 356788899999988765 58999999 Q ss_pred HHHHHHHHhcccccc-cceeecCCCceeeecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNS-HRIALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 240 ~~~~~~~~~~g~~n~-g~~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) +++.|++.+++..+. ..++++++|++|+++++++.++ |++|++++++++||++|||||++|++ ++++.++ T Consensus 201 ~~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~----~~sn~e~ 276 (395) T protein:vir:10 201 LQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG----ETADLEK 276 (395) T ss_pred HHHHHHHHhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC----cccCHHH Confidence 999999998875432 2355689999999999988765 89999999999999999999999963 7889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) +.+.|+++||.|++.+|+++|+++++.+.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+| T Consensus 277 ~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~ 354 (395) T protein:vir:10 277 NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSD 354 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999988776554 56889999999999999999999999999999999999999997 Q ss_pred Cc--ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 GG--DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 394 ~g--d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +| |++++|+|++|++.+.....++.+...+..++.+.|| T Consensus 355 ~g~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 355 NPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCCCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 65 9999999999998766555444444333333333344 No 59 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=4.6e-79 Score=450.06 Aligned_cols=386 Identities=16% Similarity=0.155 Sum_probs=308.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++. ++.. .... .......++.+.++++++|++||++||++||++|+++++++ T Consensus 1 Mg~f~~lf~~-----~~~~--~~~~-----------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--- 59 (395) T protein:vir:10 1 MSILEKIFKT-----RKDI--TYML-----------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--- 59 (395) T ss_pred Cchhhhhhcc-----Cccc--cccc-----------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--- Confidence 9999998432 1111 0000 11223456778899999999999999999999999999743 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...+|+++++|+.+||++||+++||+.++.++++.|++|+++.++. .++++++..++....... .... T Consensus 60 --~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~ 127 (395) T protein:vir:10 60 --RIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD-----IFKD 127 (395) T ss_pred --ccccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc-----ceeE Confidence 2457999999999999999999999999999999999998775543 256666665555443221 1122 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKV 239 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ 239 (432) +.....+..+.++++||||+|++++.+..+|.||+.++...+.... +.|.+++.++|++..+.. .++++.++ T Consensus 128 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~ 200 (395) T protein:vir:10 128 VTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEK 200 (395) T ss_pred EEEcCceeeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHH Confidence 2333444567899999999998888888999999999887776544 356788899999988765 58999999 Q ss_pred HHHHHHHHhcccccc-cceeecCCCceeeecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 240 FRENFESMSSGLQNS-HRIALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 240 ~~~~~~~~~~g~~n~-g~~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) +++.|++.+++..+. ..++++++|++|+++++++.++ |++|++++++++||++|||||++|++ ++++.++ T Consensus 201 ~~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~----~~sn~e~ 276 (395) T protein:vir:10 201 LQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG----ETADLEK 276 (395) T ss_pred HHHHHHHHhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC----cccCHHH Confidence 999999998875432 2355689999999999988765 89999999999999999999999963 7889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) +.+.|+++||.|++.+|+++|+++++.+.++..+ ++||++.+++.|.+++++++.+++++|++|+||+|+++|+||+| T Consensus 277 ~~~~~~~~~l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~ 354 (395) T protein:vir:10 277 NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSD 354 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999988776554 56889999999999999999999999999999999999999997 Q ss_pred Cc--ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 GG--DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 394 ~g--d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +| |++++|+|++|++.+.....++.+...+..++.+.|| T Consensus 355 ~g~~d~~~~~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 355 NPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDESGD 395 (395) T ss_pred CCCCceeeeccccccccccccccCcccccccCCCCCCCCCC Confidence 65 9999999999998766555444444333333333344 No 60 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=6.5e-79 Score=449.22 Aligned_cols=382 Identities=19% Similarity=0.200 Sum_probs=316.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++++... ................+++.......++.+.++++|+|++||++||++||++|+++++.. T Consensus 1 M~~f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~~--- 72 (386) T protein:vir:48 1 MPIFNITNLATE-----SPPISQGGFFDITDPDFLSTLNGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRKQ--- 72 (386) T ss_pred Cccccccccccc-----ccccccccccccccchhcccccCCceechhhhhcchHHHHHHHHHHHhhccCceeeccch--- Confidence 999987644311 111111111111112345556667789999999999999999999999999999998532 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .+.|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|++|++..+..+. ..+ T Consensus 73 ---------~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~-----~~~ 138 (386) T protein:vir:48 73 ---------LQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKD-----GIY 138 (386) T ss_pred ---------hHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCc-----eEE Confidence 355778999999999999999999999999999999999999999999999999998876532 222 Q ss_pred EEecc----cCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVNT----GGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~~----~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+.. .+..+.|+++||||+|++++.+.++|.||+..+..++....++++++.++|+||+.|+++++.+...++++ T Consensus 139 y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~ 218 (386) T protein:vir:48 139 YNITFDDPRIPPKQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDF 218 (386) T ss_pred EEEEecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Confidence 33322 23557899999999998888888999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) .+++++.|.... .|+|+++|+++|++|++++.++.|+|++|++++++++||++|||||.+||. ..++++.+++.+ T Consensus 219 ~~~~~~~~~~~~---~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~--~~~~~~~e~~~~ 293 (386) T protein:vir:48 219 KTKLSRSRQAMK---QMQGGPLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGG--QGDQQSSLEMSL 293 (386) T ss_pred HHHHHHHHHHhh---cCCCCceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC--CCCcccHHHHHH Confidence 999999887643 578999999999999999999999999999999999999999999999985 357789999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 396 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd 396 (432) +|++.||.|+++.|+++|+++++.. +++|.......|...++..+.+++++|++|+||+|+++|++|++++| T Consensus 294 ~~~~~~l~P~~~~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~~~~ 365 (386) T protein:vir:48 294 DLYNKAVSRYLRPFLSELSQKLSCD--------VDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEILPKE 365 (386) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcch--------hhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCCCcc Confidence 9999999999999999999998754 45666667778888888999999999999999999999999987777 Q ss_pred eeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 397 RLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 397 ~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) .... +.......+||+.++++ T Consensus 366 ~~~~-------~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:48 366 LPEG-------ENPNKTTLKGGEINGED 386 (386) T ss_pred chhh-------cCCCCCccCCCCCCCCC Confidence 4321 11222345566665555 No 61 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=1.7e-79 Score=452.47 Aligned_cols=387 Identities=13% Similarity=0.105 Sum_probs=302.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||++||+++|+...+..... . ...| .....++.+.++++++|++||++||++||++||+++++++ T Consensus 1 Mg~~~~~~~~~~~~~~~~~~~----~----~~~~----~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~~-- 66 (395) T protein:vir:40 1 MGFKSWVSGFFNEEQRTLNLT----D----TVWC----SIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKGE-- 66 (395) T ss_pred CchHHHHHhhhcccccccccc----c----chhh----ccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCCc-- Confidence 999999999987443322111 1 1111 1122456788999999999999999999999999987543 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...|++.++|+.+||++|++++||+.++.+++++||+|+++.++.. ++.+...+. ..... ...+ T Consensus 67 ---~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~~------~~~~~~~~~--~~~~~-----~~~~ 130 (395) T protein:vir:40 67 ---EVRKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEYI------YVADSFTKN--DKSLY-----ENTY 130 (395) T ss_pred ---cccchHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCce------eecCCcccc--ccccc-----ccee Confidence 3458999999999999999999999999999999999999887642 222221111 11000 0011 Q ss_pred EEecccC--ceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 161 YVVNTGG--QQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 161 ~~~~~~~--~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) .....++ ..+.|++++|||+|+++.....++.+++......+.... ....+.++.++.+++..+...++++.+ T Consensus 131 ~~v~~~~~~~~~~~~~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~ 205 (395) T protein:vir:40 131 TEVTLKDLTLKKEFKESEVLHLTLNNESIKSIIDGFYLLYGDLLTAAV-----NKYKKLNSRKIIVKLKAMFGQTPEAEE 205 (395) T ss_pred eeeeecCceeeeeeccccEEEeecCCCCccccchhHHHHHHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHH Confidence 1111122 235689999999997655544455555554444433322 233445666666667778888999999 Q ss_pred HHHHHHHHHhccc-ccccceeecCCCceeeecCCChhHHHHHHHHHHHH---HHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGL-QNSHRIALMPVGYQFQPISLNMSDAQFLENTELTI---RQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 239 ~~~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~---~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) ++++.|.+++.+. .++++++++++|++|+++++++.|+|++|.+++.. ++||++|||||.+|++ +++|.+++ T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~~----~~sn~e~~ 281 (395) T protein:vir:40 206 KLRLMLSERMKKFLAEGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAKG----DTVGLSEQ 281 (395) T ss_pred HHHHHHHHHHHHhhccCCceeecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhcC----CCcCHHHH Confidence 9999999998774 46788999999999999999999999999998874 7999999999999963 68899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC- Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA- 393 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~- 393 (432) ...|+++||.|++++||++|++++|++.++..|++++||++.+++.|.+++++.+.+++++|++|+||+|+++|+||++ T Consensus 282 ~~~f~~~~L~P~~~~ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~ 361 (395) T protein:vir:40 282 VNSFLMFSINPIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMS 361 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC Confidence 9999999999999999999999999999988899999999999999999999999999999999999999999999995 Q ss_pred -CcceeeeccccccccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 394 -GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKE 427 (432) Q Consensus 394 -~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~ 427 (432) +||++++++|++|++...+ ..+||+++++.++. T Consensus 362 ~~gD~~~~~~n~~~~~~~~~-~~kgge~~~~~~~~ 395 (395) T protein:vir:40 362 PETQERFVTKNYAPLGENEE-DLKGGDINENKGDS 395 (395) T ss_pred CCCceeeecccccccccccc-ccCCCCCCCCcCCC Confidence 5999999999999986543 45667666554333 No 62 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=8.5e-79 Score=448.60 Aligned_cols=377 Identities=19% Similarity=0.239 Sum_probs=310.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++. .| .++...... ..++..+...+........++.+.|+++++|++||++||++||++|+++++ T Consensus 1 Mg~~~~~--~~--~k~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~----- 69 (383) T protein:vir:10 1 MGLLTPK--NF--SKRNAKNMV--YPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVSSAHFKTEN----- 69 (383) T ss_pred CCccccc--cc--ccccccccc--cccchhhhhhhccCccccccchhHhhcchHHHHHHHHHHHhhccCceeecc----- Confidence 9999863 11 122222111 112222233333333455688999999999999999999999999999864 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) |+..++|+ +||++||+++||+.++.+++++||+|++++++ ..+++|+++.+|++..+... ..+. T Consensus 70 ------~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~~~-----~~~~ 133 (383) T protein:vir:10 70 ------TATLNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMG-----IVYT 133 (383) T ss_pred ------cchhhhhh-CCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcCCc-----eEEE Confidence 45556665 89999999999999999999999999999875 46788999999988776643 2334 Q ss_pred EEecccCceEEEccceEEEEecCCC--CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGIT--LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAK 237 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~--~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~ 237 (432) +....++..+.|+++||||||+.++ .++.+|+||+.++...+....++++++.++|+||++|++++++++.. ++++. T Consensus 134 ~~~~~~~~~~~~~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~ 213 (383) T protein:vir:10 134 VLESNDRPKMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDL 213 (383) T ss_pred EEEcCCceEEEEcccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHH Confidence 4556677788999999999996544 45678999999999999999999999999999999999999999877 58899 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH-HHHHHHHHHHHHHhcCChhhccCcc--ccccccHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL-ENTELTIRQIATAFGIKMHQLNDLS--KATLNNIEQQ 314 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~-e~~~~~~~~I~~~~gvp~~~l~~~~--~~~~~~~~~~ 314 (432) +++++.|++.++| .|+|+++++++|++|++++.++.|+|++ +++++++++||++|||||.+||+.+ +.++++.+++ T Consensus 214 ~~~~~~~~~~~~~-~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~ 292 (383) T protein:vir:10 214 ESAREEFEKANTG-DNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQI 292 (383) T ss_pred HHHHHHHHHHhCc-cccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHH Confidence 9999999999887 6899999999999999999999999974 8999999999999999999998754 5678888888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) ...| ..||.|+++.|+++|+++++.+ +++||.+.+++.|.+++++.+.+++++|++|+||+|+++|++|+++ T Consensus 293 ~~~~-~~~l~P~~~~ie~~l~~~l~~~-------~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~ 364 (383) T protein:vir:10 293 KATY-LANLNSYVNPIVDELRLKMNAP-------DLELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFLP 364 (383) T ss_pred HHHH-HHHHHHHHHHHHHHHHHhhCCc-------eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCcccC Confidence 7655 5699999999999999998753 5889999999999999999999999999999999999999999999 Q ss_pred cceeeeccccccccccccccCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~~~~~~gg~~~ 421 (432) ||......+.. ..+||+.. T Consensus 365 ~d~~~~~~~~~--------~~~gGd~e 383 (383) T protein:vir:10 365 DNLPEFKPLTN--------ETKGGDDK 383 (383) T ss_pred CcccccCCCcc--------cCCCCCCC Confidence 99654433322 33454444 No 63 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=3.1e-79 Score=450.99 Aligned_cols=374 Identities=16% Similarity=0.194 Sum_probs=305.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|.+. + +..... ++..+ ...++.+.|+++++|++||++||++||++|+++++++. T Consensus 1 Mg~f~~~f~~-----~-~~~~~~---~~~~~---------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~-- 60 (385) T protein:vir:95 1 MGLFDSVFKR-----H-SELSWM---YDLEF---------LQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNT-- 60 (385) T ss_pred Cchhhhhhcc-----C-cccccc---cchhh---------hhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCc-- Confidence 9999987431 1 111111 11111 12356778999999999999999999999999998654 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...|+++++|+.+||++||+++||+.++.+++++||+|+++.+++ +.+..++++.+..+....+. ... T Consensus 61 ---~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~ 128 (385) T protein:vir:95 61 ---KEKGTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHR--------FTN 128 (385) T ss_pred ---cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeecccccccccccccccc--------cee Confidence 245999999999999999999999999999999999999887654 34555556666555433221 111 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC--CCCHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKK 238 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~ 238 (432) ......+..+.+++++|||+|++++.+..+|.||+..+...+....++.. +++.++++++++. .+++++.+ T Consensus 129 ~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~-------~~~~~~g~l~~~~~~~~~~e~~~ 201 (385) T protein:vir:95 129 VLVNDFEFKRVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQM-------LNNQIRGILKVDATKFYNKEKQK 201 (385) T ss_pred eeecccceeeeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHHH-------hcCCCceEEEeCCccCCCHHHHH Confidence 11222334567999999999988877788999999999998876655432 2345778888764 56899999 Q ss_pred HHHHHHHHHhccccc-ccceeecCCCceeeecCC------ChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 239 VFRENFESMSSGLQN-SHRIALMPVGYQFQPISL------NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 239 ~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++++.|+++++|..+ .++++++++|++|+++++ ++.|+|++|.+++++++||++|||||.+|+ ++++|. T Consensus 202 ~~~~~~~~~~~g~~~~~~~i~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~----~~~sn~ 277 (385) T protein:vir:95 202 ELQAYIDTLFDAFQNNTIAVVPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL----GEMADL 277 (385) T ss_pred HHHHHHHHHhhhhhhcCCceEEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCH Confidence 999999999998755 455888999999999874 677999999999999999999999999996 478999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 391 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p 391 (432) +++...|++.||.|++++|+++|+++++++.++. +.+++||.+.+++.|.+++++++.+++++|++|+||+|+++|+|| T Consensus 278 e~~~~~~~~~~l~P~~~~ie~~l~~~L~~~~~~~-~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p 356 (385) T protein:vir:95 278 EKTIESYLQFCINPLLRKIEAELNSKFFYQDEYL-NDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEP 356 (385) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhcc-cceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Confidence 9999999999999999999999999999987764 458999999999999999999999999999999999999999999 Q ss_pred C--CCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 392 E--AGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 392 ~--~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) + ||||++++|+|++|++. .+|||++++ T Consensus 357 ~~~~~gd~~~~~~n~~~~~~-----~kgge~~~e 385 (385) T protein:vir:95 357 ADDPELDKFIITKNLQSADA-----FKGGESNEE 385 (385) T ss_pred CCCCCCceeeecccceeccc-----ccCCCCCCC Confidence 8 68999999999999874 577777776 No 64 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=3.1e-78 Score=445.52 Aligned_cols=426 Identities=15% Similarity=0.153 Sum_probs=314.9 Q ss_pred CchHHHHHHhccccccccccccc-------cCCc-----------------hHHH-----HHhhcCCcCccc-----ccH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE-------LNKD-----------------DEKL-----LEWLGISPSTIS-----VKG 46 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~-------~~~~-----------------~~~~-----~~~~g~~~~~~~-----v~~ 46 (432) ||||++|++.+............ .... .+.+ ...++..+...+ ... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~ 80 (547) T protein:vir:63 1 MGLFESIRLAGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVL 80 (547) T ss_pred CchhhhhhhhcCCccccccccccccccchhhhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHH Confidence 99999999876522211111000 0000 0000 000111111111 012 Q ss_pred HHHhccHHHHHHHHHHHHhhccC-----------ceEEEeecCCcc---e-eeccchhHHhhhcccccc-----CCHHHH Q lcl|Aclame:pro 47 KNALKVATVFACIKILSESVSKL-----------PLKIYQEDEYGI---Q-RGTKHYLNNLLRLRPNPY-----MSSMNF 106 (432) Q Consensus 47 ~~a~~~~~v~~~i~~ia~~ia~~-----------~~~~~~~~~~~~---~-~~~~~~~~~lL~~~pn~~-----~~~~~f 106 (432) +.+..+|+|++||+.||+.||.+ +|.+.-++.+.+ + ....+++..+|+ +||++ +++.+| T Consensus 81 ~~~~~npiv~~~I~~~a~~ia~~~~~~~~~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~-~pn~~~~p~~~s~~~f 159 (547) T protein:vir:63 81 KKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIE-KTGVDNDINRDSFSSF 159 (547) T ss_pred HHhhcCHHHHHHHHHHHHHHhhhhhhhhhhccCCCceeEecccccccChhhHHHHHHHHHHHH-hhCCCCCCccchHHHH Confidence 34456899999999999999964 233322221111 1 112244555554 78877 488999 Q ss_pred HHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCC Q lcl|Aclame:pro 107 FGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL 186 (432) Q Consensus 107 ~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~ 186 (432) |+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+..+........++.+..++....|+++||||+|+++.. T Consensus 160 ~~~lv~d~ll~Gn~~~~i~rd~~G~~~~L~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~~~eiih~r~n~~~ 239 (547) T protein:vir:63 160 VKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRS 239 (547) T ss_pred HHHHHHHHHhhCCEEEEEEECCCCcEEEEEEecCceeEEEECCccccccCceEEEEEcCCcEEEEeccccEEEecccCCC Confidence 99999999999999999999999999999999999999998887766555556666666667778999999999976544 Q ss_pred C---cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhcccccccceeec- Q lcl|Aclame:pro 187 D---GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGLQNSHRIALM- 260 (432) Q Consensus 187 ~---~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~n~g~~~vl- 260 (432) + +.+|+||+.++...+..+.++++++.++|+||++|+|+|.++.. +++++++++++.|++.++|..|+|+++++ T Consensus 240 ~~~~~~~G~Spi~~~~~~i~~~~~a~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~ 319 (547) T protein:vir:63 240 DIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVS 319 (547) T ss_pred CcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCccccccccccc Confidence 4 56899999999999999999999999999999999999988654 79999999999999999999999998655 Q ss_pred CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc----------cccccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK----------ATLNNIEQQQQQFYTDTLQATLTMY 330 (432) Q Consensus 261 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~----------~~~~~~~~~~~~~~~~~l~P~~~~i 330 (432) ++|++|+++++++.|+||+|++++++++||++|||||.+||..+. .+++|.+++...|++.||.|+++.| T Consensus 320 ~~g~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~i 399 (547) T protein:vir:63 320 AEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFI 399 (547) T ss_pred CCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 689999999999999999999999999999999999999986443 3789999999999999999999999 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCcceeeeccccccccc Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDM 409 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p-~~~gd~~~~~~n~~~~~~ 409 (432) +++|+++++...+ .+++ |+++.+...+..++++.+ +++.+|+||+||+|+++|||| +||||+++.+.+..+++. T Consensus 400 e~~ln~~L~~~~~--~~~~--~~f~~~~~~~~~~~~~~~-~~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~ 474 (547) T protein:vir:63 400 EDFINKHIVAEFG--DKYT--FQFVGGDIKSELESVKIL-AEKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQ 474 (547) T ss_pred HHHHHhhcccccC--CceE--EEeeccccccHHHHHHHH-HHHhCCCcCHHHHHHHhCCCCCCCCCceeecccccccccc Confidence 9999999886532 3444 455666667777776655 467789999999999999998 699999998888776543 Q ss_pred cccccC----------------CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 410 AGQAYL----------------KGGDTNGEVSKEGNEGN 432 (432) Q Consensus 410 ~~~~~~----------------~gg~~~~~~~~~~~e~~ 432 (432) ..+... .+++.+.+++.+.++.+ T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (547) T protein:vir:63 475 LMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVEDIPDGKD 513 (547) T ss_pred cccccCCccccchhhccccccccCCCCCCCCCCCCCCcc Confidence 211100 01111111111111100 No 65 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=3.2e-78 Score=445.44 Aligned_cols=383 Identities=17% Similarity=0.157 Sum_probs=306.1 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++++.-................+..+..+++. .+...|+.+.|+++++|++||++||++||++|+++++... T Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:74 3 LPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLLG-DNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccCcccccccccccccCchhhhhhhccC-CCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchh-- Confidence 9999987653221111111122222333445555543 4566789999999999999999999999999999987543 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..|+.+||++|++++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..+..+. ..+ T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~-----~~~ 144 (392) T protein:vir:74 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) T ss_pred ----------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCc-----eEE Confidence 23667999999999999999999999999999999999999999999999999999876432 222 Q ss_pred EEec----ccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+. ..+..+.++++||||++++++.+..+|.||+.++...+.+..++++++.++|+||+.|++++++++...+++ T Consensus 145 y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~ 224 (392) T protein:vir:74 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) T ss_pred EEEEecCCccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH Confidence 2222 233467799999999998877777899999999999999999999999999999999999999987654443 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) +.+++|.+.+.|..|+|+++|+++|++|+++++++.|+|++|.+++.+++||++|||||.+||+.+..+ +..++.+ T Consensus 225 --~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~--~~~e~~~ 300 (392) T protein:vir:74 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQIS 300 (392) T ss_pred --HHHHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHH Confidence 335667777888889999999999999999999999999999999999999999999999998765433 4556788 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCC Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEA 393 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~ 393 (432) +|++++|.|+++.|+++|+++++.. ++||...+.+.|..++++.+.+++++|++|+||+|+++ |+.| T Consensus 301 ~~~~~~l~p~~~~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~p-- 370 (392) T protein:vir:74 301 GMYASALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP-- 370 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHhccch--------hcccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc-- Confidence 9999999999999999999998643 67888889999999999999999999999999999987 4332 Q ss_pred CcceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 394 ~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~ 425 (432) ++.....|+.| .++|+.++..| T Consensus 371 --ne~r~~enl~~--------~~~Gd~~~p~p 392 (392) T protein:vir:74 371 --KDLPAPENTNK--------KTTGQSNEPVP 392 (392) T ss_pred --cccchhcCCCC--------CCCCCCCCCCC Confidence 22222223222 33444444333 No 66 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=3.4e-78 Score=445.32 Aligned_cols=425 Identities=14% Similarity=0.154 Sum_probs=323.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHH------------hh-cC-----C--------cCccccc--------- Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLE------------WL-GI-----S--------PSTISVK--------- 45 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-g~-----~--------~~~~~v~--------- 45 (432) |.|+..|+++|....++.......+.++..... +. |. . ......+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 80 (535) T protein:vir:10 1 MAILKDLRNAFSLSNKKSTSYIELGDYDKDIVNKAIRPGRASARDTVDGIDIADGNVAGQYSVASISDVLSTKKLLKAYA 80 (535) T ss_pred ChhhHHHHHHHHhhhhhhhhhHHHhhhhHHHHHhhhhhhhhhhhccccccccccCCcccccccCccccccCHHHHHHHhc Confidence 999999999988776666666555555544311 00 10 0 0000011 Q ss_pred --------HHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc--ceeeccchhHHhhhccccccCCHHHH----HHHHH Q lcl|Aclame:pro 46 --------GKNALKVATVFACIKILSESVSKLPLKIYQEDEYG--IQRGTKHYLNNLLRLRPNPYMSSMNF----FGSLE 111 (432) Q Consensus 46 --------~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~--~~~~~~~~~~~lL~~~pn~~~~~~~f----~~~~~ 111 (432) .+.+....++|+|+.++++.++++|+++++.+.++ .+....|++..+|+.+||++|++++| +++++ T Consensus 81 ~~~~~~~~i~t~~~~va~~~~i~~~s~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv 160 (535) T protein:vir:10 81 DNDIVQAIIRTRTNQVLTYSNPSRYNRNGVGFKVELKDATKVMSKAQIKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKII 160 (535) T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHhcccCcceeEEEeccCCCcchhhhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHH Confidence 12333456677888888888889999999876544 34456789999999999999988764 55566 Q ss_pred HHHHhc-CCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCC---C Q lcl|Aclame:pro 112 AQKNLY-GNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITL---D 187 (432) Q Consensus 112 ~~~l~~-G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~---~ 187 (432) .+++++ |++|++++++..|++.+|+|++|.+|++..+.... .....+|.+..++....|++++|||+++++.. + T Consensus 161 ~d~l~~~g~ay~~i~r~~~G~~~~L~~l~p~~V~v~~d~~~~--~~~~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~ 238 (535) T protein:vir:10 161 NDMYVQDQINIERIFKNDSNELDHFNAVDASKVVISYSPRSK--DQPRKFEQFVSETKSVKFSERNLTFINYWNLSDTDR 238 (535) T ss_pred HHHHhhCCceEEEEEECCCCcEEEEEEeCCceeEEEEcCccc--cCceEEEEEecCceeEEECcccEEEEeccCCCCccc Confidence 665554 57899999999999999999999999998876533 22345666667777888999999999976544 3 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC----CCHHHHHHHHHHHHHHhcccccccceeecC-C Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD----LNEDAKKVFRENFESMSSGLQNSHRIALMP-V 262 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-~ 262 (432) +.+|+||+.++...+..+.++++++.++|+||++|+|+|+++.. +++++.+++++.|++.++|..|+|+++|+. + T Consensus 239 ~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~~~ 318 (535) T protein:vir:10 239 RGYGYSPVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILAAK 318 (535) T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHHhcCcccccccccccCC Confidence 56899999999999999999999999999999999999999753 689999999999999999999999987665 7 Q ss_pred CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccccc------------HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 263 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN------------IEQQQQQFYTDTLQATLTMY 330 (432) Q Consensus 263 g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~------------~~~~~~~~~~~~l~P~~~~i 330 (432) |++|+++++++.|+||+|.+++++++||++|||||.+||..+++||+| .+++...|++.||.||++.| T Consensus 319 g~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~~~~~~~~~~s~~E~~~~~~~~~~L~P~l~~i 398 (535) T protein:vir:10 319 DAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGKSGTKSVNEGSTAKAKLESSKDKGLTPLLSFI 398 (535) T ss_pred CceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999988877754 56677789999999999999 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecc---ccccc Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNG---NMLPI 407 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~---n~~~~ 407 (432) +++|+++++...+ .+++|+++.+++.|.++++++++.+. +|+||+||+|+++||||+||||+++... ++... T Consensus 399 e~~ln~~Ll~~~~----~~~~f~f~~l~~~d~~~r~~~~~~~~-~g~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~ 473 (535) T protein:vir:10 399 EQVINDKIMRYVD----TDYRFSFTLGDAQDKLQEEQVWKLKL-ANGYFINEYRKDHGLKTVDGLDVPGFIGSAENFINA 473 (535) T ss_pred HHHHhhhcccccC----CeEEEEeccccccCHHHHHHHHHHHH-cCCCCHHHHHHHhCCCCCCCccccccccchhhcccc Confidence 9999999986543 34567778999999999998887665 6779999999999999999999865432 22111 Q ss_pred c---cc---ccccCCCCCCCCCCCC---------CCCCCC Q lcl|Aclame:pro 408 D---MA---GQAYLKGGDTNGEVSK---------EGNEGN 432 (432) Q Consensus 408 ~---~~---~~~~~~gg~~~~~~~~---------~~~e~~ 432 (432) . .+ ......+.+.+++.++ ++++++ T Consensus 474 ~~~~~~~~p~~~~~~~~~~~~~~~q~~~~~~~~~~~g~~~ 513 (535) T protein:vir:10 474 TGFGQPNVPDSSDDSGSTLGERERQERIQHSKDYEKGKDD 513 (535) T ss_pred cccccccCCCCCCCccccCCccccCcccccccccccCCCC Confidence 0 00 0001111111111111 111111 No 67 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=2.9e-78 Score=445.69 Aligned_cols=361 Identities=16% Similarity=0.190 Sum_probs=287.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++++++.+...-.. ...+..| .+...+++.++|++||++||++||++|+++++..+++ T Consensus 1 Mg~f~~~~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~ 62 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNND---------TQRVTAW---------QNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSD 62 (378) T ss_pred CCccccchhcccccccCC---------cceeeee---------ccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccC Confidence 999998876432111100 0011111 1223456788999999999999999999988876554 Q ss_pred c-----eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC-CCceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 81 I-----QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 81 ~-----~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) . ....+|++++||+.+||++|++++||+.++.+++++||+|++++++. .|.+..++|.. T Consensus 63 ~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~~--------------- 127 (378) T protein:vir:94 63 VGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFAD--------------- 127 (378) T ss_pred cccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEecC--------------- Confidence 2 34567999999999999999999999999999999999999877654 46666555421 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) ..+.|++++|||+|++ .+...|.||++.+...+... ++ ++.++|+++++..+++ T Consensus 128 -------------~~~~~~~~diiH~~~~--~~~~~g~s~l~~~~~~i~~~----------~~-~~~~~gil~~~~~l~~ 181 (378) T protein:vir:94 128 -------------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQTK----------LE-QGKLRGLLKINAFLDI 181 (378) T ss_pred -------------CeeEeeeeeeEEecCc--CCccchhHHHHHHHHHHHHH----------Hh-cccccceeeeCCcCCH Confidence 1245789999999954 56678999999888766432 23 3568999999999998 Q ss_pred HHHHHHHHHHHHHhc---ccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 235 DAKKVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 235 ~~~~~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++.++.+++|.+.+. +..|+|+++++++|++|++++.++.++++ +.++++.++||++|||||.+|++ ++. T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~~------~~s 254 (378) T protein:vir:94 182 DNTQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TAS 254 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------ChH Confidence 887777777766653 23578899999999999999999999996 67799999999999999999953 356 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++..+|+++||.|++++|+++|+++||++.++..+. .++||.+.+++.|.+++++.+.+++++||||+||+|+ T Consensus 255 e~~~~~f~~~tL~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~ 334 (378) T protein:vir:94 255 QEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLV 334 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 7899999999999999999999999999988776664 3779999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++||||+||||++++|+|++|++.+++++.. .+..++++|+| T Consensus 335 ~~gl~p~~gGD~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~e~~ 376 (378) T protein:vir:94 335 KMGEQPIEGGDVYIANLNAVAVKNLSDLQGS-----RKDVTSTDETN 376 (378) T ss_pred HhCCCCCCCCCeeeecccccccccchhhcCC-----cCCCCCCCCCC Confidence 9999999999999999999999876544321 22223344444 No 68 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=6.7e-77 Score=438.20 Aligned_cols=383 Identities=17% Similarity=0.155 Sum_probs=305.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++++.-.....+.............+..++.. .+...|+.+.|+++++|++||++||++||++|+++++... T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:39 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLG-DNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcC-CCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh-- Confidence 9999987653322222222222222333344444433 3456789999999999999999999999999999986542 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..+..+. ..+ T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~-----~~~ 144 (392) T protein:vir:39 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCc-----eEE Confidence 34667999999999999999999999999999999999999999999999999998876432 222 Q ss_pred EEec----ccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+. .++....++++||||++++++.+..+|+||+.++..++.+..+++++..++|+||++|+|+++++....+++ T Consensus 145 y~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~ 224 (392) T protein:vir:39 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) T ss_pred EEEEecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH Confidence 2222 233467799999999998877777899999999999999999999999999999999999999987654432 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) +.+++|.+.+.|..|+|+++|+++|++|++++.++.|+|+++.+++++++||++|||||.+||+....+ +.+++.+ T Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~--~~~~~~~ 300 (392) T protein:vir:39 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQIS 300 (392) T ss_pred --HHHHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHH Confidence 234667777888889999999999999999999999999999999999999999999999998754333 5567788 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCC Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEA 393 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~ 393 (432) +|+++||.|+++.|+++|+++++.. ++||...+.+.|..++++.+.+++++|++|+||+|+++ |+.|. T Consensus 301 ~f~~~~l~P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~- 371 (392) T protein:vir:39 301 GMYASALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK- 371 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCcc- Confidence 9999999999999999999998653 56888888889999999999999999999999999987 55542 Q ss_pred CcceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 394 ~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~ 425 (432) +.....|+. ..++|+.++..| T Consensus 372 ---e~r~~e~l~--------~~~~Gd~~~p~p 392 (392) T protein:vir:39 372 ---DLPAPENTN--------KKTTGQSNEPVP 392 (392) T ss_pred ---ccchhcCCC--------CCCCCCCCCCCC Confidence 111112222 233444444444 No 69 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=6.7e-77 Score=438.20 Aligned_cols=383 Identities=17% Similarity=0.155 Sum_probs=305.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++++.-.....+.............+..++.. .+...|+.+.|+++++|++||++||++||++|+++++... T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-- 79 (392) T protein:vir:10 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLG-DNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcC-CCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh-- Confidence 9999987653322222222222222333344444433 3456789999999999999999999999999999986542 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|.+|++..+..+. ..+ T Consensus 80 ----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~-----~~~ 144 (392) T protein:vir:10 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) T ss_pred ----------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCc-----eEE Confidence 34667999999999999999999999999999999999999999999999999998876432 222 Q ss_pred EEec----ccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+. .++....++++||||++++++.+..+|+||+.++..++.+..+++++..++|+||++|+|+++++....+++ T Consensus 145 y~~~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~ 224 (392) T protein:vir:10 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) T ss_pred EEEEecCcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH Confidence 2222 233467799999999998877777899999999999999999999999999999999999999987654432 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) +.+++|.+.+.|..|+|+++|+++|++|++++.++.|+|+++.+++++++||++|||||.+||+....+ +.+++.+ T Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~--~~~~~~~ 300 (392) T protein:vir:10 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQIS 300 (392) T ss_pred --HHHHHHHHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHH Confidence 234667777888889999999999999999999999999999999999999999999999998754333 5567788 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCC Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEA 393 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~ 393 (432) +|+++||.|+++.|+++|+++++.. ++||...+.+.|..++++.+.+++++|++|+||+|+++ |+.|. T Consensus 301 ~f~~~~l~P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~- 371 (392) T protein:vir:10 301 GMYASALNRYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK- 371 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCcc- Confidence 9999999999999999999998653 56888888889999999999999999999999999987 55542 Q ss_pred CcceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 394 ~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~ 425 (432) +.....|+. ..++|+.++..| T Consensus 372 ---e~r~~e~l~--------~~~~Gd~~~p~p 392 (392) T protein:vir:10 372 ---DLPAPENTN--------KKTTGQSNEPVP 392 (392) T ss_pred ---ccchhcCCC--------CCCCCCCCCCCC Confidence 111112222 233444444444 No 70 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=4.3e-77 Score=439.23 Aligned_cols=373 Identities=18% Similarity=0.170 Sum_probs=310.1 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++... +.................+++.+.+...++.+.|+++++|++||++||++||++||+++++.. T Consensus 1 Mglf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~-- 73 (384) T protein:vir:49 1 MPIFNITNLA-----TESPPSNQDSFFDITDPEFLDALNGSEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQL-- 73 (384) T ss_pred CccccccccC-----cccccccchhhccccchhhcccccCCceechhhhhccHHHHHHHHHHHHHHhhCceeeecchh-- Confidence 9999865211 111111111111111122345556667789999999999999999999999999999986543 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+.+.. ..+ T Consensus 74 ----------~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~-----~~~ 138 (384) T protein:vir:49 74 ----------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQN-----GLY 138 (384) T ss_pred ----------hhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCc-----eEE Confidence 34678999999999999999999999999999999999999999999999999998765422 122 Q ss_pred EEec----ccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVN----TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~----~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+. ..+..+.++++||||+|++++.+..+|+||+.++...+....+++++..++|+||+.|++++++++..++++ T Consensus 139 y~~~~~~~~~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 218 (384) T protein:vir:49 139 YNITFDDPRIPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDF 218 (384) T ss_pred EEEEecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHH Confidence 2222 234567899999999998888788999999999999999999999999999999999999999999988776 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc--cccccHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQQ 314 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~--~~~~~~~~~ 314 (432) .++ .+.+.+.+..|+|+++++++|++|+++++++.|+|++|.+++++++||++|||||.+|++... .++++.+++ T Consensus 219 ~~~---~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~ 295 (384) T protein:vir:49 219 KTK---QSRSRQAMKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNI 295 (384) T ss_pred HHH---HHHHHHhcccCCccceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHH Confidence 543 445556677899999999999999999999999999999999999999999999999987543 466788899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---ccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKL---FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP 391 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~l---l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p 391 (432) ...+++.++.|+++.|+++|++++ +.......+.+++|+.+.+++.+..++.++..++.+.|+++ ||+|+.+|++| T Consensus 296 ~~~~i~~~l~pi~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~-ne~r~~~~~~p 374 (384) T protein:vir:49 296 YFKAVSRFLRPFVSELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILP-KDLPEGETDST 374 (384) T ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCC-hhHHHHcCCCC Confidence 999999999999999999999887 33444455678999999999999999999999999999986 99999999999 Q ss_pred CCCcce--ee Q lcl|Aclame:pro 392 EAGGDR--LL 399 (432) Q Consensus 392 ~~~gd~--~~ 399 (432) ++|||. .| T Consensus 375 ~~gGd~~~~~ 384 (384) T protein:vir:49 375 LKGGETNEQY 384 (384) T ss_pred CCCCCCCCCC Confidence 998772 33 No 71 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=3.3e-77 Score=439.91 Aligned_cols=361 Identities=16% Similarity=0.183 Sum_probs=287.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++++++.+.. ..... .....|. +...+++.++|++||++||++||++|+++++.++++ T Consensus 1 Mg~f~~~~~f~~~~-~~~~~--------~~~~~~~---------~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~ 62 (378) T protein:vir:93 1 MNLFGKVVSFSRGK-LNNDT--------QRVTAWQ---------NEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSD 62 (378) T ss_pred Cccchhhhhhhccc-cCCCc--------ceeeecc---------cchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccc Confidence 99999987743211 11000 0011121 122456788999999999999999999999877655 Q ss_pred c-----eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-CceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 81 I-----QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 81 ~-----~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) . ....+|+++++|+.+||++|++++||+.++.+++++||+|++++++.. |++..++|. T Consensus 63 ~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~---------------- 126 (378) T protein:vir:93 63 VGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFA---------------- 126 (378) T ss_pred cccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEec---------------- Confidence 3 334679999999999999999999999999999999999999887643 555554432 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) +..+.|+++||||+|+ +.+...|.|++..+...+. ..+.+ +.++|+++.+..+++ T Consensus 127 ------------~~~~~~~~~diih~r~--~~~~~~~~s~l~~~~~~i~----------~~~~~-~~~~g~l~~~~~l~~ 181 (378) T protein:vir:93 127 ------------DDKKEYKTEELVRLTS--PFYINEDTSILDNALASIQ----------TKLEQ-GKLRGLLKINAFLDI 181 (378) T ss_pred ------------CCeeEeccceeEEecC--ccccchhhHHHHHHHHHHH----------HHHhc-CcccceeeeCCcCCH Confidence 1124688999999995 4566678998887765543 23444 568999999999998 Q ss_pred HHHHHHHHHHHHHhc---ccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 235 DAKKVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 235 ~~~~~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++.++++++|.+.+. +..++|+++++++|++|++++.++.++|+ +.+++++++||++|||||.+|++ ++. T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~ 254 (378) T protein:vir:93 182 DNTQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TAT 254 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CcH Confidence 887777777776653 33578899999999999999999999996 77889999999999999999953 456 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++...|++.||.|++++|+++|+++||++.++..++ +++||.+.+++.|.+++++++.+++++|++|+||+|+ T Consensus 255 e~~~~~f~~~tl~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~ 334 (378) T protein:vir:93 255 QEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLV 334 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 8999999999999999999999999999988776664 4789999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++|+||+||||++++++|++|++..+.+.... +...+++|+| T Consensus 335 ~~gl~p~~ggD~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~e~~ 376 (378) T protein:vir:93 335 KMGEQPIEGGDVYIANLNAVAVKNLSDLQGSR-----KDVTSTDETN 376 (378) T ss_pred HhCCCCCCCCCeeeeccccccccchhhhcCcc-----CCCCCCCCCC Confidence 99999999999999999999998776543321 1222334444 No 72 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=9.2e-77 Score=437.44 Aligned_cols=352 Identities=19% Similarity=0.250 Sum_probs=290.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|++ +.. .. ...+. ......|.+.+...|+.+.|+++++|++||++||++||++|+. T Consensus 1 M~~~~~f~~------r~~--~~-~~~~~-~~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~-------- 62 (359) T protein:vir:10 1 MSILNPFER------RSS--IT-PNNYY-PFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFI-------- 62 (359) T ss_pred Ccccchhhc------ccc--CC-CCcch-hhhhccccccCCcccCHHHhhcchHHHHHHHHHHHhhhcCccc-------- Confidence 999986643 111 11 11121 1222345566677899999999999999999999999999984 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) .|+++++|+.+||++||+++||+.++.+++++||+|++++|+..|.+.+|+|++|..|++..+++.. .+. T Consensus 63 -----~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~-----~y~ 132 (359) T protein:vir:10 63 -----GNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDDTL-----TYE 132 (359) T ss_pred -----cchHHHHHhhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCCeE-----EEE Confidence 3677888889999999999999999999999999999999999999999999999999998776421 222 Q ss_pred EEecccCceEEEccceEEEEecCC----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCCHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGI----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNED 235 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~----~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~ 235 (432) +....++..+.++++||||||.++ +.++.+|+||+.++..++....+++++..++|+||++|+|++++++ .++++ T Consensus 133 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e 212 (359) T protein:vir:10 133 VNQFDDYPSAKYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSE 212 (359) T ss_pred EEecCCceEEEEcccceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHH Confidence 333456778899999999999654 3477899999999999999999999999999999999999999976 67999 Q ss_pred HHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc--cccccHHH Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQ 313 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~--~~~~~~~~ 313 (432) +.+++++.|++.++| .|+|+++||++|++|+++++++.|+|++|.+++++++||++|||||++|++.++ .++++.++ T Consensus 213 ~~~~~~~~~~~~~~~-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~ 291 (359) T protein:vir:10 213 AKDSIRKEFEKANGG-NNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKD 291 (359) T ss_pred HHHHHHHHHHHHhCc-cccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHH Confidence 999999999887755 799999999999999999999999999999999999999999999999987543 46777788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) +...++..+|.|+++.|+..|++++.. ..+..++|| .......+.+++++|++|+||+|+++|++|+- T Consensus 292 ~~~~~l~~~l~p~~~~l~~~l~~~~~~----~~~~~~~~d--------~~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 292 LYVNALNRFIEPLISELRIKCDSSIGV----DMSPITDYS--------NSVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc----cchhhhhcC--------HHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 888888888888888877777665432 223344444 33334556779999999999999999999986 No 73 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=4.9e-77 Score=438.96 Aligned_cols=361 Identities=16% Similarity=0.188 Sum_probs=287.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++++++.+...-. . ...+..|. +...+++.++|++||++||++||++||++++.++++ T Consensus 1 Mg~f~~~~~~~~~~~~~-~--------~~~~~~~~---------~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~ 62 (378) T protein:vir:16 1 MNLFGKVVSFSRGKLNN-D--------TQRVTAWQ---------NEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSD 62 (378) T ss_pred CccchhhhhhhcccccC-C--------cceeeecc---------cchhhHHHHHHHHHHHHHHhhhhhCceeEEEEcccc Confidence 99999987654321110 0 00011111 123456888999999999999999999999887655 Q ss_pred c-----eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-CceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 81 I-----QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 81 ~-----~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) . .+..+|+++++|+.+||++|++++||+.++.+++++||+|++++++.. |++..++|.. T Consensus 63 ~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~~--------------- 127 (378) T protein:vir:16 63 VGSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD--------------- 127 (378) T ss_pred cccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC--------------- Confidence 3 234579999999999999999999999999999999999999988754 5554444321 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) ..+.|+++||||+|++ .+...|.|++..+...+. ..+. ++.++|+++.+..+++ T Consensus 128 -------------~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~----------~~~~-~~~~~g~l~~~~~l~~ 181 (378) T protein:vir:16 128 -------------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQ----------TKLE-QGKLRGLLKINAFLDI 181 (378) T ss_pred -------------CeeEecccceEEecCc--cCccchhHHHHHHHHHHH----------HHHh-cCccceeeEeCCcCCH Confidence 1245789999999953 456678888887776543 2233 4578999999999998 Q ss_pred HHHHHHHHHHHHHhc---ccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 235 DAKKVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 235 ~~~~~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++.++.+++|.+.+. +..|+|+++++++|++|+++++++.++++ +.+++++++||++|||||.+|++ ++. T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~ 254 (378) T protein:vir:16 182 DNTQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TAS 254 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------Cch Confidence 877777777776653 33578999999999999999999999997 56789999999999999999953 456 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++..+|+.+||.|++++|+++|+++||++.++..++ .++||.+.+++.|.+++++.+.+++++|++|+||+|+ T Consensus 255 e~~~~~f~~~tl~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~ 334 (378) T protein:vir:16 255 QEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLV 334 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 8999999999999999999999999999988776654 4789999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++|+||+||||++++|+|++|++..++... ..+...+++|+| T Consensus 335 ~~g~~p~~ggD~~~~~~n~~~~~~~~~~~~-----~~~~~~~~~e~~ 376 (378) T protein:vir:16 335 KMGEQPIEGGDVYIANLNAVAVKNLSDLQG-----SRKDVTSTDETN 376 (378) T ss_pred HhCCCCCCCCCeEeeccccccccchhhhcC-----ccCCCCCCCCCC Confidence 999999999999999999999987654322 122223444444 No 74 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=1.5e-77 Score=441.74 Aligned_cols=381 Identities=15% Similarity=0.155 Sum_probs=292.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |||||+|+... .. ......+ .+ ....++.+.|+++++|++||++||++||++||+++++++ T Consensus 1 Mgl~d~~~~~~-----~~--~~~~~~~----~~------~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~-- 61 (395) T protein:vir:96 1 MGILDFFSFKK-----SG--TLSDDDS----GS------TTSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEK-- 61 (395) T ss_pred CcchhhhcCCC-----Cc--ccccccc----cc------chhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCc-- Confidence 99999884321 11 1111100 01 111356778999999999999999999999999997643 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) +...+|++.++|+.+||++||+++||+.++.+++++||+|+++.++..+.+...++.... .... .... T Consensus 62 -~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~ 129 (395) T protein:vir:96 62 -LTENQKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYVADAFTQDKK-----LSGN------KFKV 129 (395) T ss_pred -cccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceecCCccccccc-----cccc------eeee Confidence 345679999999999999999999999999999999999999998754322222221111 0000 0000 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHH------HHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSAS------ADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~------~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) +........+.+++++|||+|++++....++.+++..+...+....+ +.++..+.+.+++.+.+++..++...+ T Consensus 130 v~~~~~~~~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (395) T protein:vir:96 130 SRVQGQTYEKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQP 209 (395) T ss_pred eeeccceeeeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhH Confidence 11111122467999999999987766666666655555544444333 346778889999999999998888777 Q ss_pred HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHH------HHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT------IRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~------~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) +..++..+++..... .+.++++++++|++|++++.++.|+|+++.+++. .++||++|||||.+|+ +++ T Consensus 210 ~~~~~~~~~~~~~~~--~~~~~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~----~~~ 283 (395) T protein:vir:96 210 KSDKDFFKRTIEKIR--TESVVGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDI 283 (395) T ss_pred HHHHHHHHHHHHHhh--cCCcceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCC Confidence 777666666655443 2456788899999999999999999999888765 5899999999999996 378 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhC Q lcl|Aclame:pro 309 NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED 388 (432) Q Consensus 309 ~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~g 388 (432) ++.+++.+.|+++||.|++++||++|++++|++.++..+.+ |+++.+++.|.+++++.+.+++++|++|+||+|+++| T Consensus 284 sn~e~~~~~f~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~~--f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g 361 (395) T protein:vir:96 284 ADNQKNYELLLEGPIESLITNIVDGLEYAIFDKSETLEGSF--IKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIG 361 (395) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCcee--EeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhC Confidence 99999999999999999999999999999999888777655 6778999999999999999999999999999999999 Q ss_pred CCCCCC--cceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 389 LPPEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 426 (432) Q Consensus 389 l~p~~~--gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~ 426 (432) +||+|+ ||++++|+|++|++. +|||++++.++ T Consensus 362 l~pi~~~~gD~~~~~~N~~~~~~------~gge~~~~~~~ 395 (395) T protein:vir:96 362 LPELPDGLGKVLYMTKNYESVLE------RGGEVDEEVET 395 (395) T ss_pred CCCCCCCCCceeeecccceechh------ccCCCCCCCCC Confidence 999966 999999999999863 57766555444 No 75 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=1.1e-76 Score=437.08 Aligned_cols=368 Identities=15% Similarity=0.174 Sum_probs=290.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++.+. ++..... . +. .....++.+.|+++++|++||++||+++|++|+++++++ T Consensus 1 Mg~f~~l~~~-----~~~~~~~--~--~~---------~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~--- 59 (376) T protein:vir:78 1 MGFFSELFKR-----NKEIEWM--W--DL---------DFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGE--- 59 (376) T ss_pred Cchhhhhhcc-----CCccccc--c--ch---------hhccccchhhhhhhHHHHHHHHHHHHhhcccceeecccc--- Confidence 9999987432 1111111 0 00 012246788899999999999999999999999998643 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...+|+++++|+.+||++||+++||+.++.++++.||+|+++.++..|.+.+++|+.+..+....... T Consensus 60 --~~~~~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------- 127 (376) T protein:vir:78 60 --TSVRDKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDVFEG---------- 127 (376) T ss_pred --ccccchHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeeeeee---------- Confidence 34579999999999999999999999999999999999999999999999999999988765432211 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF 240 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 240 (432) +.....+..+.|+++||||+|++......++.+++..+...+... ..+..+.++.++.+++..+..+++++.+++ T Consensus 128 ~~~~~~~~~~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 202 (376) T protein:vir:78 128 VTVKDYRYNRNFSMDDVIFLEYGNERLSAFTDGMFEDYGELFGKM-----IRAQMRNFQIRGAVNFKMAGVADKDKQTKL 202 (376) T ss_pred eeeecceeeeeeccccEEEeccCCCCchhhhhHHHHHHHHHHHHH-----HHHHHhcCCCceeEEEccCCCCCHHHHHHH Confidence 111111224569999999999765543333333333333222211 112234455555556667778899999999 Q ss_pred HHHHHHHhcccc-cccceeecCCCceeeecCCChhHH-----HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH Q lcl|Aclame:pro 241 RENFESMSSGLQ-NSHRIALMPVGYQFQPISLNMSDA-----QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ 314 (432) Q Consensus 241 ~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~ 314 (432) ++.|++.++|.. +.++++++++|++|+++++++.|+ |++|.+++++++||++|||||.+|++ ++++.+++ T Consensus 203 ~~~~~~~~~g~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~~----~~s~~e~~ 278 (376) T protein:vir:78 203 QEYIDKVYASFNNNEIAIVPQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLHG----DMADLSNN 278 (376) T ss_pred HHHHHHHhccccccCcceEEcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhCC----CCCCHHHH Confidence 999999999864 455678899999999999988664 99999999999999999999999974 68899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 315 QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG 394 (432) Q Consensus 315 ~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~ 394 (432) .+.|+++||.|++++||++|++++|++.+ +++.|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+|+ T Consensus 279 ~~~f~~~~l~P~~~~ie~~l~~kll~~~~----~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~ 354 (376) T protein:vir:78 279 MKAYMEYCIDPLTKKLEDELNAKLFTFSE----FLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDN 354 (376) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCccc----ceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 99999999999999999999999998754 46778888899999999999999999999999999999999999987 Q ss_pred c--ceeeeccccccccccccccCCCCCCCC Q lcl|Aclame:pro 395 G--DRLLVNGNMLPIDMAGQAYLKGGDTNG 422 (432) Q Consensus 395 g--d~~~~~~n~~~~~~~~~~~~~gg~~~~ 422 (432) | |++++|+|++|+++.++ ++ T Consensus 355 g~~d~~~~~~n~~~~~~~~e--------~g 376 (376) T protein:vir:78 355 PELDKYLITKNYQSADEGGE--------DG 376 (376) T ss_pred CCCceeeeccCceehhcccc--------CC Confidence 5 99999999999874321 11 No 76 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=1.9e-75 Score=430.24 Aligned_cols=422 Identities=16% Similarity=0.159 Sum_probs=301.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhc-----CCcCcc------cccHHHHhccHHHHHHHHHHHHhhcc- Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG-----ISPSTI------SVKGKNALKVATVFACIKILSESVSK- 68 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~------~v~~~~a~~~~~v~~~i~~ia~~ia~- 68 (432) =+.|..+...-....++ ......+...+.+...-| ..++.. .-....+..+|+|++||++||+.||+ T Consensus 32 ~~~~~~~~~~~~~~~~~-~~~~~~a~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia~~vA~~ 110 (576) T protein:vir:96 32 QANIRNIEEKSKELNKS-LYGKQQAYAEPFLEVMDTNPEFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRSNQVAMY 110 (576) T ss_pred hHHHHHhhhhhhhhccc-cCCccchhhcceeeeeecCCCccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHHHHHHhh Confidence 12222221100000000 000000000110000000 001100 01113344689999999999999997 Q ss_pred ----------CceEEEeecCCcc----eeeccch----hHHhhhcccccc-CCHHHHHHHHHHHHHhcCCeEEEEee--C Q lcl|Aclame:pro 69 ----------LPLKIYQEDEYGI----QRGTKHY----LNNLLRLRPNPY-MSSMNFFGSLEAQKNLYGNSYANIEF--D 127 (432) Q Consensus 69 ----------~~~~~~~~~~~~~----~~~~~~~----~~~lL~~~pn~~-~~~~~f~~~~~~~~l~~G~~~~~~~~--~ 127 (432) ++|.+..++.++. .....|+ +.+++ ..||++ +|+.+||+.++.+++++||+|+++++ + T Consensus 111 ~~~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~p~~~t~~~f~~~lv~dlll~Gna~~~i~~~rd 189 (576) T protein:vir:96 111 CQPSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTG-RDKDIDRDSFQSFCRKIVRDTYTYDQVNFEKVFNKK 189 (576) T ss_pred hhhhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhcc-CCCCCccccHHHHHHHHHHHHHhcCCeEEEEEEecC Confidence 3344433333321 1112233 33333 245554 58999999999999999999999885 4 Q ss_pred CCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCC---cccccCHHHHHHHHHHH Q lcl|Aclame:pro 128 RKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLD---GLVGVPTMEYLKSTLEN 204 (432) Q Consensus 128 ~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~---~~~G~s~~~~~~~~~~~ 204 (432) +.|.+.+|+|++|.+|++..+.++........++.+..++....+++++|||+++++..+ +.+|+||+.++..++.+ T Consensus 190 ~~g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~~~i~~ 269 (576) T protein:vir:96 190 NATTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAMKQFIA 269 (576) T ss_pred CCCceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHHHHHHH Confidence 568899999999999999999887766666666777777778889999999887555444 67899999999999999 Q ss_pred HHHHHHHHHHHHhccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccc-eeecCCCceeeecCCChhHHHHHHH Q lcl|Aclame:pro 205 SASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHR-IALMPVGYQFQPISLNMSDAQFLEN 281 (432) Q Consensus 205 ~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~n~g~-~~vl~~g~~~~~~~~~~~d~~~~e~ 281 (432) ..++++++.++|+||++|+|+|+++. .+++++++++++.|++.++|..|+|+ ++|+++|++|+++++++.|+||+|. T Consensus 270 ~~~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~qfle~ 349 (576) T protein:vir:96 270 YNNTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDMQFEKW 349 (576) T ss_pred HHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhHHHHHH Confidence 99999999999999999999999875 46999999999999999999999999 5899999999999999999999999 Q ss_pred HHHHHHHHHHHhcCChhhccCcccc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhh Q lcl|Aclame:pro 282 TELTIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYS 350 (432) Q Consensus 282 ~~~~~~~I~~~~gvp~~~l~~~~~~-----------~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~ 350 (432) +++.+++||++|||||.+||..+.+ |++|.+++.+.|++.||.|++..|+++|+++|+...+ ..+++ T Consensus 350 ~~~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~--~~~~~ 427 (576) T protein:vir:96 350 LTYLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEYS--DKYVF 427 (576) T ss_pred HHHhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc--CceEE Confidence 9999999999999999999876543 7899999999999999999999999999999886532 33333 Q ss_pred hhhhhhhhhhhHHHHHHHHHH--HHhCCCcCHHHHHHHhCCCCCCCcceeeecccccccccccccc-------------- Q lcl|Aclame:pro 351 KFNVDAILRADIKTRYEAYRT--GIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAY-------------- 414 (432) Q Consensus 351 ~fd~~~l~~~d~~~~~~~~~~--~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~-------------- 414 (432) +| ++.|.+++++.+.. ++.+|+||+||+|+++||||+||||+++.|.++.+++...... T Consensus 428 ~f-----~r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 502 (576) T protein:vir:96 428 QF-----VGGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPIEGGDVLLDGSFIQSMSLNTQKEQYEDTKQKERFDMI 502 (576) T ss_pred Ee-----ccCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCCCCcceeccccccccccccccCCCCCCcccccccccc Confidence 33 46677777776654 4567999999999999999999999999999887665322110 Q ss_pred ---CCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 415 ---LKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 415 ---~~gg~~~~~~~~~~~e~~ 432 (432) .++++.... ..+..+++ T Consensus 503 ~~~~~~~~~~~~-~~~s~~~~ 522 (576) T protein:vir:96 503 QQFLNSPDDEEP-QQESTEDK 522 (576) T ss_pred ccccCCCCCCCC-CCCCCCCc Confidence 011111100 00111111 No 77 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=7.9e-75 Score=426.83 Aligned_cols=423 Identities=16% Similarity=0.171 Sum_probs=306.6 Q ss_pred CchHH--------------------------------------HHHHhccccccccccccccCCchHHHHHhhcCC---- Q lcl|Aclame:pro 1 MKIVD--------------------------------------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS---- 38 (432) Q Consensus 1 Mg~~~--------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---- 38 (432) --||. -|.+..+...++..++.. ...+......+.. T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~ 79 (563) T protein:vir:99 2 ADLFKQFRLGKDYGNNSTIAQVPIDEGLQANIKKIEQDNKEYQDLTKSLYGQQQAYAEPFI--EMMDTNPEFRDKRSYMK 79 (563) T ss_pred hhhhhhhhcccccccccccceeeccCChhhhHhhhhccchhHHHHHhhhccCCCcchhhhH--hhhcccccccccccCCC Confidence 11222 222222111111111110 0000000011110 Q ss_pred -cCcccccHHHHhccHHHHHHHHHHHHhhcc-------------CceEEEeecCCcc--eeeccchhHHhhh---ccccc Q lcl|Aclame:pro 39 -PSTISVKGKNALKVATVFACIKILSESVSK-------------LPLKIYQEDEYGI--QRGTKHYLNNLLR---LRPNP 99 (432) Q Consensus 39 -~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~-------------~~~~~~~~~~~~~--~~~~~~~~~~lL~---~~pn~ 99 (432) ........+.+-.+++|.+||+.+++.||. ++++++..+.++. +....|++..+|. ..|++ T Consensus 80 ~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p 159 (563) T protein:vir:99 80 NEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDV 159 (563) T ss_pred CcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCC Confidence 001111123334578899999999998885 6777777665443 2233456655442 12333 Q ss_pred c-CCHHHHHHHHHHHHHhcCCeEEEEe--eCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccce Q lcl|Aclame:pro 100 Y-MSSMNFFGSLEAQKNLYGNSYANIE--FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEE 176 (432) Q Consensus 100 ~-~~~~~f~~~~~~~~l~~G~~~~~~~--~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (432) + +++.+||+.++.+++++||+|++++ ++..|++.+|+|++|++|++..+..+........++....++....|++++ T Consensus 160 ~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~e 239 (563) T protein:vir:99 160 DRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRE 239 (563) T ss_pred CcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcc Confidence 3 5889999999999999999999875 777899999999999999999998876666666666666677777899999 Q ss_pred EEEEecCCCCC---cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 177 ILHFKNGITLD---GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGL 251 (432) Q Consensus 177 vih~~~~~~~~---~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~ 251 (432) |||++.++..+ +.+|+||+.++...+.+..++++++.++|+||++|+|+|+++.. +++++++++++.|++.++|. T Consensus 240 vI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~ 319 (563) T protein:vir:99 240 LAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGI 319 (563) T ss_pred eEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccc Confidence 98776555444 67899999999999999999999999999999999999998754 69999999999999999999 Q ss_pred ccccce-eecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc-----------ccccHHHHHHHHH Q lcl|Aclame:pro 252 QNSHRI-ALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFY 319 (432) Q Consensus 252 ~n~g~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~-----------~~~~~~~~~~~~~ 319 (432) .|+|++ +|+++|++|+++++++.|+||+|++++++++||++|||||.+||..+.+ +++|.+++.+.|+ T Consensus 320 ~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~ 399 (563) T protein:vir:99 320 NGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQ 399 (563) T ss_pred cccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHH Confidence 999996 7899999999999999999999999999999999999999999876543 5688999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHH--HHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYR--TGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~--~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) +.||.||++.|+++|+++++...+ .+ +.|+ +++.|.+++++.+. +++++|+||+||+|+++||||+||||+ T Consensus 400 ~~tL~P~l~~ie~~ln~~L~~~~~--~~--~~~~---f~r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~ 472 (563) T protein:vir:99 400 NKGLQPLLRFIEDLVNRHIISEYG--DK--YTFQ---FVGGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDI 472 (563) T ss_pred HHHHHHHHHHHHHHHHhhhchhcc--cc--cEEE---eccCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcce Confidence 999999999999999999886532 23 3343 35677877777654 468899999999999999999999999 Q ss_pred eeeccccccccccccccCC-------------C---CCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLK-------------G---GDTNGEVSKEGNEGN 432 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~-------------g---g~~~~~~~~~~~e~~ 432 (432) ++.|.++.+++........ + ++.+..++.+.++++ T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (563) T protein:vir:99 473 ILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDSEEGQSTDSS 523 (563) T ss_pred eecccccccccccccccCCCccccchhhhhcccccCCCCCCCCCCCCCCCC Confidence 9999988766543211110 0 000000011111111 No 78 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=7.9e-75 Score=426.83 Aligned_cols=423 Identities=16% Similarity=0.171 Sum_probs=306.6 Q ss_pred CchHH--------------------------------------HHHHhccccccccccccccCCchHHHHHhhcCC---- Q lcl|Aclame:pro 1 MKIVD--------------------------------------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS---- 38 (432) Q Consensus 1 Mg~~~--------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---- 38 (432) --||. -|.+..+...++..++.. ...+......+.. T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~ 79 (563) T protein:vir:95 2 ADLFKQFRLGKDYGNNSTIAQVPIDEGLQANIKKIEQDNKEYQDLTKSLYGQQQAYAEPFI--EMMDTNPEFRDKRSYMK 79 (563) T ss_pred hhhhhhhhcccccccccccceeeccCChhhhHhhhhccchhHHHHHhhhccCCCcchhhhH--hhhcccccccccccCCC Confidence 11222 222222111111111110 0000000011110 Q ss_pred -cCcccccHHHHhccHHHHHHHHHHHHhhcc-------------CceEEEeecCCcc--eeeccchhHHhhh---ccccc Q lcl|Aclame:pro 39 -PSTISVKGKNALKVATVFACIKILSESVSK-------------LPLKIYQEDEYGI--QRGTKHYLNNLLR---LRPNP 99 (432) Q Consensus 39 -~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~-------------~~~~~~~~~~~~~--~~~~~~~~~~lL~---~~pn~ 99 (432) ........+.+-.+++|.+||+.+++.||. ++++++..+.++. +....|++..+|. ..|++ T Consensus 80 ~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p 159 (563) T protein:vir:95 80 NEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDV 159 (563) T ss_pred CcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCC Confidence 001111123334578899999999998885 6777777665443 2233456655442 12333 Q ss_pred c-CCHHHHHHHHHHHHHhcCCeEEEEe--eCCCCceEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccce Q lcl|Aclame:pro 100 Y-MSSMNFFGSLEAQKNLYGNSYANIE--FDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEE 176 (432) Q Consensus 100 ~-~~~~~f~~~~~~~~l~~G~~~~~~~--~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (432) + +++.+||+.++.+++++||+|++++ ++..|++.+|+|++|++|++..+..+........++....++....|++++ T Consensus 160 ~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~e 239 (563) T protein:vir:95 160 DRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRE 239 (563) T ss_pred CcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcc Confidence 3 5889999999999999999999875 777899999999999999999998876666666666666677777899999 Q ss_pred EEEEecCCCCC---cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC--CCHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 177 ILHFKNGITLD---GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD--LNEDAKKVFRENFESMSSGL 251 (432) Q Consensus 177 vih~~~~~~~~---~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~ 251 (432) |||++.++..+ +.+|+||+.++...+.+..++++++.++|+||++|+|+|+++.. +++++++++++.|++.++|. T Consensus 240 vI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~ 319 (563) T protein:vir:95 240 LAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGI 319 (563) T ss_pred eEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccc Confidence 98776555444 67899999999999999999999999999999999999998754 69999999999999999999 Q ss_pred ccccce-eecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc-----------ccccHHHHHHHHH Q lcl|Aclame:pro 252 QNSHRI-ALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA-----------TLNNIEQQQQQFY 319 (432) Q Consensus 252 ~n~g~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~-----------~~~~~~~~~~~~~ 319 (432) .|+|++ +|+++|++|+++++++.|+||+|++++++++||++|||||.+||..+.+ +++|.+++.+.|+ T Consensus 320 ~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~ 399 (563) T protein:vir:95 320 NGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQ 399 (563) T ss_pred cccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHH Confidence 999996 7899999999999999999999999999999999999999999876543 5688999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHH--HHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYR--TGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~--~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) +.||.||++.|+++|+++++...+ .+ +.|+ +++.|.+++++.+. +++++|+||+||+|+++||||+||||+ T Consensus 400 ~~tL~P~l~~ie~~ln~~L~~~~~--~~--~~~~---f~r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~ 472 (563) T protein:vir:95 400 NKGLQPLLRFIEDLVNRHIISEYG--DK--YTFQ---FVGGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDI 472 (563) T ss_pred HHHHHHHHHHHHHHHHhhhchhcc--cc--cEEE---eccCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcce Confidence 999999999999999999886532 23 3343 35677877777654 468899999999999999999999999 Q ss_pred eeeccccccccccccccCC-------------C---CCCCCCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLK-------------G---GDTNGEVSKEGNEGN 432 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~-------------g---g~~~~~~~~~~~e~~ 432 (432) ++.|.++.+++........ + ++.+..++.+.++++ T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (563) T protein:vir:95 473 ILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDSEEGQSTDSS 523 (563) T ss_pred eecccccccccccccccCCCccccchhhhhcccccCCCCCCCCCCCCCCCC Confidence 9999988766543211110 0 000000011111111 No 79 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=1.6e-75 Score=430.67 Aligned_cols=361 Identities=16% Similarity=0.159 Sum_probs=281.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++++++....... . ......+....+++.++|++||++||++||++|+++++.++++ T Consensus 1 M~if~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~ 62 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNND--T----------------QRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSD 62 (378) T ss_pred CchhHHhHhhhhcccccC--c----------------ceeeeeecchhhhhhHHHHHHHHHHHHhHhhCceeeeeecccc Confidence 999999988764322111 0 0011112333467788999999999999999999999876543 Q ss_pred c-----eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee-CCCCceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 81 I-----QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-DRKGKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 81 ~-----~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~-~~~g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) . +...+|+++++|+.+||++||+++||+.++.++++.||+|++++. +..|.+..+++. T Consensus 63 ~~~~~~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~---------------- 126 (378) T protein:vir:94 63 VGSDTLISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA---------------- 126 (378) T ss_pred cccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe---------------- Confidence 2 345689999999999999999999999999999999999998654 445655444332 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) .++ +.|++++|||++.+...+ .+.+++..+...+. ..++ ++.++|+++.+..+++ T Consensus 127 ----------~~~--~~~~~~dvih~~~~~~~~--~~~~~~~~~~~~~~----------~~~~-~~~~~g~l~~~~~l~~ 181 (378) T protein:vir:94 127 ----------NDK--KEYKPEELVRLTSPFYIN--EDTSILDNALASIQ----------TKLE-QGKLRGLLKINAFLDI 181 (378) T ss_pred ----------cCc--EEechhceeeecCcCCcc--cchhHHHHHHHHHH----------HHHh-hCCcccceeeCCcCCH Confidence 111 458899999999655443 34556665544332 2223 3578899999999988 Q ss_pred HHHHHHHHHHHHHhc---ccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 235 DAKKVFRENFESMSS---GLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 235 ~~~~~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++.++.+++|++.+. +..|+|+++++++|++|+++++++.++++ +.++++.++||++|||||.+|++ +.. T Consensus 182 ~~~~~~~e~~~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g------~~~ 254 (378) T protein:vir:94 182 DNTQEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TAT 254 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcC------Cch Confidence 776666555555432 33577889999999999999999999996 77899999999999999999953 345 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++..+|+++||.|+++.|+++|++++|++.++..++ ++.||.+.+++.|.+++++.+.+++++|++|+||+|+ T Consensus 255 e~~~~~f~~~tl~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~ 334 (378) T protein:vir:94 255 QEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLV 334 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 7889999999999999999999999999988776664 3669999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++|+||+||||++++|+|++|++..+..+.. .+...+++|+| T Consensus 335 ~~g~~p~~ggd~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~e~~ 376 (378) T protein:vir:94 335 KMGEQPIEGGDVYIANLNAVAVKNLSDLQGN-----RKDVTSTDETN 376 (378) T ss_pred HhCCCCCCCCCeeeecccccchhcchhcccc-----cCCCCCCCCCC Confidence 9999999999999999999999876544221 22233455555 No 80 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=1.9e-75 Score=430.26 Aligned_cols=383 Identities=14% Similarity=0.123 Sum_probs=292.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++|... +.... ....+. .....++.+.++++++|++||++||++||++|+++++.+++ T Consensus 1 MGlf~~~~~~-----~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~- 62 (395) T protein:vir:98 1 MGILDFFSFK-----KSGTL--SDDDSG----------STTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKL- 62 (395) T ss_pred CcchhhhcCC-----Ccccc--cccccc----------hhhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCc- Confidence 9999988421 11111 111110 11123566788999999999999999999999999986543 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ...+|+++++|+.+||++||+++||+.++.+++++||+|+++.++..+.+ ++..+........ .... T Consensus 63 --~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~ 129 (395) T protein:vir:98 63 --TENQKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIYV------ADSFTQDKKISGS-----QFKV 129 (395) T ss_pred --ccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCceec------CCcccccccccCc-----ccce Confidence 34579999999999999999999999999999999999999998754322 2222211111100 0011 Q ss_pred EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHH--HHHHHHHhccCCcceEEEeCCCC-CHHHH Q lcl|Aclame:pro 161 YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASAD--KFINNFYKQGLQVKGLVQYVGDL-NEDAK 237 (432) Q Consensus 161 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~--~~~~~~~~n~~~~~~~~~~~~~~-~~~~~ 237 (432) .........+.+++++|||+|+.+.....++.+++......+....... ....+++.++..+.+++...... ++++. T Consensus 130 ~~~~~~~~~~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (395) T protein:vir:98 130 SRVQGQTYEKTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQS 209 (395) T ss_pred eeecCceeeeEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHH Confidence 1111112246789999999997766556667777777666665554443 34456777888888888766554 56667 Q ss_pred HHHHHHHHHHhccc-ccccceeecCCCceeeecCC------ChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccccc Q lcl|Aclame:pro 238 KVFRENFESMSSGL-QNSHRIALMPVGYQFQPISL------NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN 310 (432) Q Consensus 238 ~~~~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~ 310 (432) ++.++.+++.+++. .+.+.++++++|++|+++++ ++.++|+.+.+++++++||++|||||.+|+ +++++ T Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~----~~~sn 285 (395) T protein:vir:98 210 KSDKDFFKRTVEKIRTESVVGIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIAD 285 (395) T ss_pred HHHHHHHHHHHhhhhcCCcceeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCccc Confidence 77777777777653 34566888999999999985 467889999999999999999999999996 46889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Q lcl|Aclame:pro 311 IEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLP 390 (432) Q Consensus 311 ~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~ 390 (432) .+++.+.|+++||.|++++||++|++++|++.++..+.+ ||++.+++.|.+++++.+.+++++|++|+||+|+++|+| T Consensus 286 ~e~~~~~f~~~tl~P~~~~ie~~l~~kll~~~~~~~g~~--f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~ 363 (395) T protein:vir:98 286 NQKNYELLLEGPIESLITNIVDGLEYAIFDKSETLQGSF--IKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLP 363 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCcce--eeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Confidence 999999999999999999999999999999888777655 667899999999999999999999999999999999999 Q ss_pred CCCC--cceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 391 PEAG--GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 426 (432) Q Consensus 391 p~~~--gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~ 426 (432) |+++ ||++++++|++|++ .+||+.+++.++ T Consensus 364 Pi~~~~gD~~~~~~n~~~~~------~~gge~~~~~~~ 395 (395) T protein:vir:98 364 ELPDGLGKVLYMTKNYESVL------ERGGEVDEEVET 395 (395) T ss_pred CCCCCCCceeeecccceecc------cccCCCCCCCCC Confidence 9966 99999999999986 356666555444 No 81 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=1.1e-74 Score=426.12 Aligned_cols=383 Identities=18% Similarity=0.167 Sum_probs=308.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHH-HHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKL-LEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) ||||+++++.. .+ .......+.... ..+++.+.+...++.+.++++|+|++||++||++||++|+++++... T Consensus 1 M~~f~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 73 (386) T protein:vir:49 1 MPIFNITNLAT-----ES-PPINQESFFDIADSDFLASLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQL- 73 (386) T ss_pred CchhhhhccCC-----CC-cccchhhhhhhhhccccccccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccchh- Confidence 99998874321 11 111111111111 12233445566799999999999999999999999999999987542 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) ..|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|..|++..+.+.... .+ T Consensus 74 -----------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~~~---~y 139 (386) T protein:vir:49 74 -----------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQNGL---YY 139 (386) T ss_pred -----------hhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceE---EE Confidence 3467899999999999999999999999999999999999999999999999999987653211 11 Q ss_pred EEEe--cccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH Q lcl|Aclame:pro 160 WYVV--NTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK 237 (432) Q Consensus 160 ~~~~--~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 237 (432) .+.. ..++..+.|+++||||+|++++.+..+|.||+.++...+....++.+++.++|+||+.|++++++++..++++. T Consensus 140 ~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~ 219 (386) T protein:vir:49 140 NITFDDPHIAPKQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFK 219 (386) T ss_pred EEEEcCccccceeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHH Confidence 1111 23456788999999999988887889999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHH Q lcl|Aclame:pro 238 KVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQ 317 (432) Q Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~ 317 (432) +++++.|... ..|+|+++++++|++|++++.++.|+|++|.+++++++||++|||||.+|++.. .++++.+ +.+. T Consensus 220 ~~~~~~~~~~---~~n~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~~~~~-~~~~ 294 (386) T protein:vir:49 220 TKVSRSRQAM---KQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDG-DQQSSLE-MIYN 294 (386) T ss_pred HHHHHHHHHh---ccCCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC-CccchHH-HHHH Confidence 9998888764 358899999999999999999999999999999999999999999999998644 3445554 4468 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR 397 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~ 397 (432) ++..++.|+++.|+++|+++++. +++||.+.+++.|..+++..+.+++++|++|+||+|++++..++...+. T Consensus 295 ~~~~~i~~~l~~i~~~~~~~l~~--------~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~~~~ 366 (386) T protein:vir:49 295 IYFKSVSRYLRPFVSEMSKKLSC--------EVDVDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILPKEL 366 (386) T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--------hhcccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCCCcC Confidence 88999999999999999998753 4789999999999999999999999999999999999998766533221 Q ss_pred eeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 398 LLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 398 ~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) . .. +.+.....+|||.+++. T Consensus 367 ~---~~----~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:49 367 P---DG----KNPNRTSLKGGEINEQD 386 (386) T ss_pred c---ch----hccCCCCCCCCCCCCCC Confidence 1 11 11112345666665444 No 82 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=2.8e-75 Score=429.27 Aligned_cols=361 Identities=16% Similarity=0.160 Sum_probs=282.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||++++.++..+..... + .....+....++++++|++||++||++||++|++++++++++ T Consensus 1 M~~f~k~~~~~~~~~~~~~-----~-------------~~~~~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~ 62 (378) T protein:vir:85 1 MNLFGKVVSFSRGKLNNDT-----Q-------------RVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSD 62 (378) T ss_pred CchhhhhhhhhhcccccCC-----c-------------ceeeeeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEeccc Confidence 9999999877643221100 0 001112334567889999999999999999999999887655 Q ss_pred c-----eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee-CCCCceEEEEEEcCcceEEEEcCcccee Q lcl|Aclame:pro 81 I-----QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-DRKGKVQALWPIDASKVTVYIDDVGLLN 154 (432) Q Consensus 81 ~-----~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~-~~~g~~~~l~~~~~~~v~~~~~~~~~~~ 154 (432) . +...+|+++++|+.+||++|++++||+.++.+++++||+|++++. +..|.+..+++. T Consensus 63 ~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~---------------- 126 (378) T protein:vir:85 63 VGSDTLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLFA---------------- 126 (378) T ss_pred cccccccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEec---------------- Confidence 3 345789999999999999999999999999999999999998654 445544333221 Q ss_pred ccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH Q lcl|Aclame:pro 155 SKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE 234 (432) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 234 (432) .+ .+.+.++||||++.+...++ +.+++..+...+ ...+ .++.++|+++.+..+++ T Consensus 127 ----------~~--~~~~~~~dvih~~~~~~~~~--~~~~~~~a~~~~----------~~~~-~~~~~~g~l~~~~~l~~ 181 (378) T protein:vir:85 127 ----------ND--KKEYKPEELVRLVSPFYINE--DTSILDNALASI----------QTKL-EQGKLRGLLKINAFLDI 181 (378) T ss_pred ----------CC--CEEEcccceEEEecCcCccc--hhhHHHHHHHHH----------HHHH-hcCCcceEEEeCCcCCH Confidence 11 24578899999996544333 334444333322 2233 34578999999999999 Q ss_pred HHHHHHHHHHHHHh---cccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 235 DAKKVFRENFESMS---SGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 235 ~~~~~~~~~~~~~~---~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ++.++.+++|++.+ .+..|+|+++++++|++|+++++++.++++ +.++++.++||++|||||.+|++ ++. T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~~------s~~ 254 (378) T protein:vir:85 182 DNTQEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILLG------TAT 254 (378) T ss_pred HHHHHHHHHHHHHHHHhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------Cch Confidence 88888877776554 344678999999999999999999999996 77899999999999999999953 456 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh------hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF------YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS 385 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~------~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~ 385 (432) +++..+|+.+||.||+++||++|+++||++.++..++ .+.||.+.+++.|.+++++.+.+++++|++|+||+|+ T Consensus 255 e~~~~~f~~~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~ 334 (378) T protein:vir:85 255 QEQQIYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLV 334 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHH Confidence 8899999999999999999999999999988776664 3679999999999999999999999999999999999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++|+||+||||++++|+|++|++..+..+.. .+...+++|+| T Consensus 335 ~lgl~p~~gGD~~~~~~N~~~~~~~~~~~~~-----~~~~~~~~e~~ 376 (378) T protein:vir:85 335 KMGEQPIEGGDIYIANLNAVAVKNLSDLQGS-----RKDVASTDETN 376 (378) T ss_pred HhCCCCCCCCCeEeecccccccccchhhcCc-----cCCCCCCCCCC Confidence 9999999999999999999999876544322 12223344444 No 83 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=4.9e-74 Score=422.50 Aligned_cols=373 Identities=18% Similarity=0.218 Sum_probs=299.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) ||||+++.+ ++.+......... ...+++.+.+...++.+.++++++|++||++||++||++||++++... T Consensus 1 Mg~f~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 70 (382) T protein:vir:48 1 MPIFNLATE-----SPPDNQGGFFDVV---DSDFLASLKGNEWVSAETALRNSDLFSIINQLSNDLATVKLITSRKKL-- 70 (382) T ss_pred Ccccccccc-----CCcccccccccch---hhhccccccCCcccchHhhhccHHHHHHHHHHHHhhccCceeeecchh-- Confidence 999987632 1111111111110 122344556667899999999999999999999999999999997542 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccceeE Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (432) ..|+.+||++||+++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+..+. ..+ T Consensus 71 ----------~~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~-----~~~ 135 (382) T protein:vir:48 71 ----------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKD-----GIY 135 (382) T ss_pred ----------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCC-----eEE Confidence 34778999999999999999999999999999999999999999999999999998876532 222 Q ss_pred EEecc----cCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Q lcl|Aclame:pro 161 YVVNT----GGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) Q Consensus 161 ~~~~~----~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 236 (432) |.+.. .+..+.|+++||||++++++.+..+|.||+.++..++....++.++..++|+||+.|++++++++..++++ T Consensus 136 y~~~~~~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~ 215 (382) T protein:vir:48 136 YNITFDDPRIPPKQHVPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDF 215 (382) T ss_pred EEEEecCccccceeEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHH Confidence 33322 24567899999999998888788999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) .+++++.|... ..|+|+++|+++|++|++++.++.|+|++|.+++.+++||++|||||.+||+.+. +++.+++.+ T Consensus 216 ~~~~~~~~~~~---~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~--~~~~~~~~~ 290 (382) T protein:vir:48 216 KTKLSRSRQAM---KQMQGGPLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGD--QQSSLEMSS 290 (382) T ss_pred HHHHHHHHHhh---ccCCCCeeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC--cccHHHHHH Confidence 99998888764 3578999999999999999999999999999999999999999999999987554 346788889 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC---- Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE---- 392 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~---- 392 (432) .|++.||.|+++.|+++|+++++...+.. ....++ .+.........+++++|++|+||+|+.++..++ T Consensus 291 ~~~~~~l~p~~~~i~~~l~~~l~~~~~~~--~~~~~~------~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~ 362 (382) T protein:vir:48 291 DLYSKAVSRYLRPFLSELSQKLSCDVDAD--IFPAVD------PTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKE 362 (382) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhh--hhhhhc------cchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcc Confidence 99999999999999999999988764432 222222 333444556778899999999999998753332 Q ss_pred -CCcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 393 -AGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 393 -~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) ++++.+ ....+||+++++. T Consensus 363 ~~~~~~~-------------~~~~~GGd~~~~~ 382 (382) T protein:vir:48 363 LPNGENP-------------NSTLKGGEEDGQD 382 (382) T ss_pred hhhhhcC-------------CCCCCCCCCCCCC Confidence 223211 1235677765544 No 84 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=5.3e-74 Score=422.29 Aligned_cols=386 Identities=13% Similarity=0.115 Sum_probs=299.8 Q ss_pred cHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC---cceeec-cchhHHhhhccccccC--------CHHHHHHHHHH Q lcl|Aclame:pro 45 KGKNALKVATVFACIKILSESVSKLPLKIYQEDEY---GIQRGT-KHYLNNLLRLRPNPYM--------SSMNFFGSLEA 112 (432) Q Consensus 45 ~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~---~~~~~~-~~~~~~lL~~~pn~~~--------~~~~f~~~~~~ 112 (432) -..-+-.+|+|++||++||++||++|++++.+.+. ++.... ++....+++.+||+.+ ++.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 12223347999999999999999999999865432 111122 2333446667788755 67789999999 Q ss_pred HHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccce--e----------------------EEEecccCc Q lcl|Aclame:pro 113 QKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK--M----------------------WYVVNTGGQ 168 (432) Q Consensus 113 ~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~--~----------------------~~~~~~~~~ 168 (432) +++++||+|++++|+..|++.+|+|++|.+|++..+.......... . .+.....+. T Consensus 81 ~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (467) T protein:vir:31 81 DYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTGT 160 (467) T ss_pred HHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeeccccccc Confidence 9999999999999999999999999999999988775432211100 0 011123455 Q ss_pred eEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC-CCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 169 QRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GDLNEDAKKVFRENFESM 247 (432) Q Consensus 169 ~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (432) .+.+++++|||+|.+++.++.+|+||+.++...+....++.+++.++|+||+.|+|++.++ ..+++++.+++++.|.+. T Consensus 161 ~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~~ 240 (467) T protein:vir:31 161 SVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIEDN 240 (467) T ss_pred eeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHhh Confidence 6789999999999988889999999999999999999999999999999999999999986 468999999999999987 Q ss_pred hc-----------ccccccceeecCCCceeeecC--------CChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 248 SS-----------GLQNSHRIALMPVGYQFQPIS--------LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 248 ~~-----------g~~n~g~~~vl~~g~~~~~~~--------~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) +. |..|+++++++.+|.+++++. .++.|+||++++++++++||++|||||.+||..+++++ T Consensus 241 ~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~~ 320 (467) T protein:vir:31 241 NEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGAF 320 (467) T ss_pred hcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCCc Confidence 75 556888999998876655543 36789999999999999999999999999998766665 Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 309 -NNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE 387 (432) Q Consensus 309 -~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~ 387 (432) ++.+++.+.|++.||.|+++.|+++|+++++...+...+++++||++.+++.|.+++++.+.+++++|++|+||+|+++ T Consensus 321 ~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~ 400 (467) T protein:vir:31 321 STDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDEF 400 (467) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHHh Confidence 6899999999999999999999999999999887777888999999999999999999999999999999999999999 Q ss_pred CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 388 DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 388 gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+||+++++ +.+.+.......+.....++..+...+...++.+ T Consensus 401 Gl~pi~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (467) T protein:vir:31 401 GFEPFPEEH--VYGGETLVAEVTGGSGPGGGIGDQIEQLVEDRAD 443 (467) T ss_pred CCCCCCccc--ccCCcccccccccccCCCCcccCcCCCCCCCccc Confidence 999996433 3332221111111111111111111111111111 No 85 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=1.7e-73 Score=419.56 Aligned_cols=407 Identities=16% Similarity=0.152 Sum_probs=298.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |+|.+.- ++...++...++.... ..+..|..+..+. ..-.+.+..+++|++||++||+.||++|++++.++. T Consensus 6 ~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~pp~~~-~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~-- 77 (540) T protein:vir:41 6 LSIKSLE-KYRAIKGDTDSQALKE----DRFEEYVEPKVHP-LVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDG-- 77 (540) T ss_pred cChhhcc-chhhhhcccccccccc----CCCCccccCCCCH-HHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCcc-- Confidence 7766522 2222222222222211 1222333332111 111355567899999999999999999999875432 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceeccc--- Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKT--- 157 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~--- 157 (432) .+..+ .||+++++++||+.++.+++++||+|++++++..|.+.+|+|++|.+|++..+......... T Consensus 78 -------~~~~~---lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~~ 147 (540) T protein:vir:41 78 -------GVEEL---LRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGIH 147 (540) T ss_pred -------chhhh---ccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeecCce Confidence 22232 49999999999999999999999999999999999999999999999999877653322111 Q ss_pred eeE---------EEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEe Q lcl|Aclame:pro 158 KMW---------YVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) Q Consensus 158 ~~~---------~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 228 (432) ..+ +....+.....+++++|||+|.+++.++.+|+||+.++...+....++++++.++|+||++|+|++++ T Consensus 148 ~~~~~~~~~~~~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~ 227 (540) T protein:vir:41 148 VTYFKDYRYEGEVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVITV 227 (540) T ss_pred eeeeecccccceeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe Confidence 111 11122334567999999999988889999999999999999999999999999999999999999999 Q ss_pred CCCCCHHH----------HHHHHHHHHHHhccc-ccccceeecC------CCceeeecCCChhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 VGDLNEDA----------KKVFRENFESMSSGL-QNSHRIALMP------VGYQFQPISLNMSDAQFLENTELTIRQIAT 291 (432) Q Consensus 229 ~~~~~~~~----------~~~~~~~~~~~~~g~-~n~g~~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~ 291 (432) ++.+++++ .+++++.|...++|. .|+|+++||+ +|++|+++++++.|+||+|.+++++++||+ T Consensus 228 ~g~l~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa~ 307 (540) T protein:vir:41 228 TGEFEDEMELGSDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIAA 307 (540) T ss_pred CcccCchhccchHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHHH Confidence 87765432 356677777777663 5789999984 799999999999999999999999999999 Q ss_pred HhcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH Q lcl|Aclame:pro 292 AFGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY 369 (432) Q Consensus 292 ~~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 369 (432) +|||||.+||..+. .+++|.+++...|+++||.|+++.|+++|+++++... ..+++++||.+.+++.|.+++ + T Consensus 308 afgVPp~~lG~~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~--~~~~~i~f~~~~ll~~D~~~~---~ 382 (540) T protein:vir:41 308 AHMIDPYRLGITDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKL--DPGARFVFNEEILMESEFVHN---Y 382 (540) T ss_pred HhCCCHHHcCcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CCceEEEecchhhcchHHHHH---H Confidence 99999999987654 4688999999999999999999999999999887643 457899999999998876554 5 Q ss_pred HHHHhCCCcCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCC---------CCCCCCC--------CCC Q lcl|Aclame:pro 370 RTGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTN---------GEVSKEG--------NEG 431 (432) Q Consensus 370 ~~~~~~g~~t~nE~R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~---------~~~~~~~--------~e~ 431 (432) .+++++|++|+||+|+.+ |++| ++|.++.|.|+...+..++.....+... .++..++ .+. T Consensus 383 ~~lv~~G~lT~NE~Re~L~g~e~--gdd~~l~p~n~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 460 (540) T protein:vir:41 383 ALLVQCGVLTPSEVREKLFGLDG--GPDMFMVPSSIGKSAMKRQKRNYEKNQINEIKRTYAKYKPRIQEIISSESPLEDK 460 (540) T ss_pred HHHHhCCCCCHHHHHHHhCcCcC--CCcccccccccccccccccccccCCCCccccccccchhcccccCccccccccccc Confidence 678999999999999864 4443 4566777888765443221111000000 0000000 000 Q ss_pred C Q lcl|Aclame:pro 432 N 432 (432) Q Consensus 432 ~ 432 (432) + T Consensus 461 ~ 461 (540) T protein:vir:41 461 K 461 (540) T ss_pred c Confidence 0 No 86 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=1.2e-73 Score=420.37 Aligned_cols=407 Identities=15% Similarity=0.131 Sum_probs=296.1 Q ss_pred hHH---HHHHhccccccccccccccCCchHHHHHhhcCCcCcccccH----HHHhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 3 IVD---SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKG----KNALKVATVFACIKILSESVSKLPLKIYQ 75 (432) Q Consensus 3 ~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 75 (432) ||+ .|+......+..+............+..+..+ +++. +.+..+++|++||++||++||++|++++. T Consensus 1 ~~~~~~~i~s~~~~~~i~~~~~~s~~~~~~~~~~~~~p-----p~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~ 75 (542) T protein:vir:41 1 MFNYHLSIRSLEKYKAIKREEVESQALGETRFEEYVEP-----KVNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEG 75 (542) T ss_pred CccccccccccccchhhhhccccccccccccCCccccC-----CCCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeec Confidence 454 22222222221111111111111111122222 2333 23346899999999999999999999975 Q ss_pred ecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceec Q lcl|Aclame:pro 76 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 155 (432) Q Consensus 76 ~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~ 155 (432) .+.. .+++..||+++++++||+.++.+++++||+|++++++..|++.+|+|++|.+|++..+....... T Consensus 76 ~~~~-----------~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~~ 144 (542) T protein:vir:41 76 DDEG-----------VVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQT 144 (542) T ss_pred ccch-----------hhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEee Confidence 4321 23344699999999999999999999999999999999999999999999999998876543221 Q ss_pred c---cee-EE--------EecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 156 K---TKM-WY--------VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVK 223 (432) Q Consensus 156 ~---~~~-~~--------~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 223 (432) . ... +. ....+.....++++||||+|++++.++.+|+||+.++...+....++++++.++|+||++|+ T Consensus 145 ~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~ 224 (542) T protein:vir:41 145 WDGVNITHFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPS 224 (542) T ss_pred ecCCcceeEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 1 000 10 11122233468899999999888899999999999999999999999999999999999999 Q ss_pred eEEEeCC----------CCCHHHHHHHHHHHHHHhccc-ccccceeecC------CCceeeecCCChhHHHHHHHHHHHH Q lcl|Aclame:pro 224 GLVQYVG----------DLNEDAKKVFRENFESMSSGL-QNSHRIALMP------VGYQFQPISLNMSDAQFLENTELTI 286 (432) Q Consensus 224 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~g~-~n~g~~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~ 286 (432) +++++++ ..++++.+++++.|++.+.|. .|+|+++|++ +|++|+++++++.|++|++.+++++ T Consensus 225 gIL~~~~~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~ 304 (542) T protein:vir:41 225 YVITVTGEFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKK 304 (542) T ss_pred EEEEeCCccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHH Confidence 9998864 357889999999999999875 5778899984 7999999999999999999999999 Q ss_pred HHHHHHhcCChhhccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHH Q lcl|Aclame:pro 287 RQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 364 (432) Q Consensus 287 ~~I~~~~gvp~~~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 364 (432) ++||++|||||.+||..+.+ ++++.+++.+.|+++||.|+++.|+++|+++++.+.+ .+++++|+.+.+++.|.. T Consensus 305 ~~Ia~afgVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~--~~~~~~f~~~~ll~~d~~- 381 (542) T protein:vir:41 305 YDIAAAHMIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFN--PKTRFKFNDETLLESDSV- 381 (542) T ss_pred HHHHHHhCCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--CceEEEecchhhcchHHH- Confidence 99999999999999987665 5589999999999999999999999999998876654 467899999999887754 Q ss_pred HHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCC---CCCCCCCC-CC Q lcl|Aclame:pro 365 RYEAYRTGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNG---EVSKEGNE-GN 432 (432) Q Consensus 365 ~~~~~~~~~~~g~~t~nE~R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~---~~~~~~~e-~~ 432 (432) +.+..++++|++|+||+|+.+ |++| ++|.++.|.|...............+... +...+++. -| T Consensus 382 --~~~~~~v~~GilT~NE~Re~L~g~~p--gdd~~l~p~~~~~~~~~~~~~n~~~~~~~~~~k~~~k~~~~~~ 450 (542) T protein:vir:41 382 --RNCALLVQSGVLTPAEARERLFGLDG--GPDIFMVPSKGAAKSVKRQERNYEKNQIREIRKIYAKYRPRFN 450 (542) T ss_pred --HHHHHHHhCCCCCHHHHHHhhCCCCC--CCccccccccccccccccCCcCCCCCchhhhhhcccccCcccc Confidence 456678999999999999854 5443 33455566665432211110000000000 00001100 01 No 87 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=2.2e-67 Score=386.01 Aligned_cols=418 Identities=10% Similarity=0.038 Sum_probs=291.6 Q ss_pred CchHHHHHHhccccccccccc------------c---------ccCCchHHHHH----------hhcCCcCc--ccccH- Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV------------I---------ELNKDDEKLLE----------WLGISPST--ISVKG- 46 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~------------~---------~~~~~~~~~~~----------~~g~~~~~--~~v~~- 46 (432) -|||+|++.+|+.+...+.+. . .....++.... ..+..... -+++. T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g~~~~~epp~d~~ 87 (648) T protein:vir:79 8 RGFWSRISLMWRDEDDDKEPLVLEESMQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGGGRDFEEPEFDFN 87 (648) T ss_pred chhhhhhhhhccCccccccccccccccccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCCccccccCCcCHH Confidence 799999998887332211000 0 00011111111 11111111 12222 Q ss_pred ---HHHhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEE Q lcl|Aclame:pro 47 ---KNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYAN 123 (432) Q Consensus 47 ---~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~ 123 (432) +.+..+|.|++||++||++||+++|.+..++++. ...++.. ++..+||++++.++||+.++.+++++||+|++ T Consensus 88 ~l~~l~~~np~V~~aI~iia~~ia~l~~~i~~~~~~~---~~~~~~~-~ll~rPn~~~t~~~f~~~l~~~lll~GNAYve 163 (648) T protein:vir:79 88 EITSAYNTEGYVRQAVDKYIEMMFKADWDFVSKNPNA---VEYIRMR-FTLMAEATQIPTNQLFIEIAEDLVKYCNVVIA 163 (648) T ss_pred HHHHHHhcChHHHHHHHHHHHHHhhCcceEEecCCcc---chhhHHH-HHhhccCCCCCHHHHHHHHHHHHHhcCCeEEE Confidence 3334699999999999999999999987765432 2223433 34469999999999999999999999999999 Q ss_pred EeeCCCCc---------------eEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCc Q lcl|Aclame:pro 124 IEFDRKGK---------------VQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDG 188 (432) Q Consensus 124 ~~~~~~g~---------------~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~ 188 (432) ++|+.+|. +.+++|++|.+|++..+..+.... +.|....++..+.|++++|||||.+++.++ T Consensus 164 iiRd~~G~~~~~l~~~~~~~~~~v~~l~pl~p~~v~v~~d~~g~~~~---Y~y~~~g~~~~~~~~~~dIIHik~~~~~d~ 240 (648) T protein:vir:79 164 KSRAKDALPFQGMNVMGVGDSMPVAGYFPLNLASMKVKRDKFGMIKG---WQQEQEGQDKPQKFKPEDIVHIYYKREKGR 240 (648) T ss_pred EEecCCCccchhhhhhhhccccceeeeEeecCceeEEEEcCCCceee---eEEEecCCceeEEecCccEEEEccCCCCCC Confidence 99998873 578999999999998877543221 223333445567799999999998888999 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeecCCCceee Q lcl|Aclame:pro 189 LVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 267 (432) Q Consensus 189 ~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~ 267 (432) ++|+||+.++...+.+..+++++..++|+||++|+++++++. ...+++.+++++.|.+.+.+. .+.+++.+++ T Consensus 241 ~~GlSpi~~a~~aI~l~~aa~~~~~~fF~NGa~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~~------~i~gg~v~~~ 314 (648) T protein:vir:79 241 AFGTPWLLPALDDIRALRQVEENVLRLVYRNLHPLWHVKVGLEQEGFGAEEGEVDLVRGEVENM------DVEGGMVTTE 314 (648) T ss_pred ceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCccchHHHHHHHHHHHHhcccc------cccccccccc Confidence 999999999999999999999999999999999999999863 345667777778887776542 2333333433 Q ss_pred ecC----CChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c Q lcl|Aclame:pro 268 PIS----LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL----F 339 (432) Q Consensus 268 ~~~----~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l----l 339 (432) .+. .+++|+|+++++++++++||++|||||.+||..+++++++.+++... +..++.|++..++..++..+ + T Consensus 315 ~~~i~~~~s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~~~ss~stae~~~~~-~~~~i~~l~~~i~~~le~~~~~~ll 393 (648) T protein:vir:79 315 RVNISSIASNQIIDAKEYLKHFEQRAFTVLGVSELMMGRGGTASRSTGDNLSSD-FKDRIKALQKVMATFINEFMVKEIL 393 (648) T ss_pred eeeccccCCHHHHHHHHHHHHHHHHHHHHhCCCHhHcccCCCccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh Confidence 332 36689999999999999999999999999998888888888777654 56678887776665555433 2 Q ss_pred cchhh----cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce-eeecccccccccc---- Q lcl|Aclame:pro 340 LDSEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR-LLVNGNMLPIDMA---- 410 (432) Q Consensus 340 ~~~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~-~~~~~n~~~~~~~---- 410 (432) .+..+ ..+.+++|+++.+++.|.+++++.+.+++++||||+||+|+++||||+|+|+. .++..++.+.... T Consensus 394 ~e~~l~~~l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~~~GilT~NEaR~~lGlpPi~~g~~~~~l~~~~~~~~~~~~~~ 473 (648) T protein:vir:79 394 MEGGFDPVLNPDDKVEFRFNEIDMDSKIKLENQAVFLYEHNAISEDEMRELIGRDPVDDGEGRAKMHLQMVTIAQATALA 473 (648) T ss_pred hhhhccccccccceEEEeecccchhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCccccccccccchhccccc Confidence 22211 22356889999999999999999999999999999999999999999987653 3444444432211 Q ss_pred -ccccCC-CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 411 -GQAYLK-GGDTNGEVSKEGNEGN 432 (432) Q Consensus 411 -~~~~~~-gg~~~~~~~~~~~e~~ 432 (432) .+...+ ++..+...+.+..|.+ T Consensus 474 ~~~~~~~~~~~~~a~~eg~~~e~~ 497 (648) T protein:vir:79 474 ALAPTPAGGSSASASGDKKKKATD 497 (648) T ss_pred cCCCCCCCCCCCCccccccccccC Confidence 111111 1111111111111111 No 88 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=2.3e-68 Score=391.44 Aligned_cols=425 Identities=14% Similarity=0.124 Sum_probs=312.1 Q ss_pred CchHH-HHHH----hccc--cccccccccccCCchHHHHHhh-cCCcCcccccHHHHhc-cHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVD-SVKK----FFNF--EKRQTSQVIELNKDDEKLLEWL-GISPSTISVKGKNALK-VATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~-~l~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~v~~~~a~~-~~~v~~~i~~ia~~ia~~~~ 71 (432) |.=-. .++. .-+. +........+.......+..-- ...+...+.......+ ++++++||+++++.||+++| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~iag~g~ 80 (651) T protein:vir:99 1 MTDTTGETQETKVHVEGLGGEADLAKSPNSTQIPDHRIQSHNVGVNPPYNPDRLAAFLELNETLATGIRKKSRYEVGFGF 80 (651) T ss_pred CCCccceeeeeEEEeecccccccccccccccccchhhhcccCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhhccCc Confidence 32110 0000 0000 0000000001111111111111 1222222333344455 89999999999999999999 Q ss_pred EEEeecC-C----cce-e-------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 72 KIYQEDE-Y----GIQ-R-------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 72 ~~~~~~~-~----~~~-~-------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) .+....+ + +.+ . ...|+.+..+...+|..++..++++.++.+++.+|++|+.++++..|.+.+|+++ T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~g~pv~L~~l 160 (651) T protein:vir:99 81 DLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIEGRPVGLAYV 160 (651) T ss_pred eeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCccchhhhhhc Confidence 9865221 1 110 0 1134555555667899999999999999999999999999999999999999999 Q ss_pred cCcceEEEEcCccce----------------------------------e-c---------------------------- Q lcl|Aclame:pro 139 DASKVTVYIDDVGLL----------------------------------N-S---------------------------- 155 (432) Q Consensus 139 ~~~~v~~~~~~~~~~----------------------------------~-~---------------------------- 155 (432) ++..+++..+..... . . T Consensus 161 p~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~d~~~ 240 (651) T protein:vir:99 161 PARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYREDEES 240 (651) T ss_pred ChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEeccCcce Confidence 998776543321000 0 0 Q ss_pred --------cceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE Q lcl|Aclame:pro 156 --------KTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ 227 (432) Q Consensus 156 --------~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 227 (432) .....+.+...+....++++||||||.+++.++.+|+||+..+..++.++.++++++.++|+||++|+|+++ T Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~gil~ 320 (651) T protein:vir:99 241 EREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPRMVIK 320 (651) T ss_pred eeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 000011222333456688999999998888899999999999999999999999999999999999999999 Q ss_pred eCC-CCCHHHHHHHHHHHHHHhcccccccceeecCC-----------CceeeecCCCh-hHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 228 YVG-DLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----------GYQFQPISLNM-SDAQFLENTELTIRQIATAFG 294 (432) Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~-----------g~~~~~~~~~~-~d~~~~e~~~~~~~~I~~~~g 294 (432) +++ .+++++.+++++.|++.+. |+|++++|++ |++|++++.++ .|+||+|++++++++||++|| T Consensus 321 ~~~~~ls~e~~~~lr~~~~~~~~---nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~afg 397 (651) T protein:vir:99 321 VTGGELSEESKRDLRQMLNGLRE---ESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKVLE 397 (651) T ss_pred ecCCCCCHHHHHHHHHHHHHHhc---cCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHHhC Confidence 875 4899999999999998664 6788888865 99999999887 599999999999999999999 Q ss_pred CChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh--hhhhhhhhhhhhhHHHHHHHHHHH Q lcl|Aclame:pro 295 IKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF--YSKFNVDAILRADIKTRYEAYRTG 372 (432) Q Consensus 295 vp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~--~~~fd~~~l~~~d~~~~~~~~~~~ 372 (432) |||.+||..+++|++|.+++.+.|+++||.|++..|+++||++++.+.+...++ +++|+...+++.|.+++++.+.++ T Consensus 398 VPp~~lG~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~~~~ 477 (651) T protein:vir:99 398 VPPVKIGVTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRVRAM 477 (651) T ss_pred CCHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999887766654 567888889999999999999999 Q ss_pred HhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC-CCCCCCCC Q lcl|Aclame:pro 373 IQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV-SKEGNEGN 432 (432) Q Consensus 373 ~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~-~~~~~e~~ 432 (432) +++|++|+||+|+++||||++ +||..+.+.+...++.+ .++|+++++. +.+.++.. T Consensus 478 i~~G~~T~NE~R~~lglppi~~~~gd~~l~~~~~~~~g~~----~~gge~~~~~~~~~~~~~~ 536 (651) T protein:vir:99 478 RLAGVGLVDEAREELGLDPLGEPYGEMTLSEFEAEVAGDV----AGGGETEAVHEPPEENKIG 536 (651) T ss_pred HhCCCcCHHHHHHHhCCCCCCCcccccccccccccccccc----ccCCCCcccccCccccccc Confidence 999999999999999999995 58888887776555432 3344333222 11111111 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=9.5e-63 Score=360.61 Aligned_cols=278 Identities=20% Similarity=0.354 Sum_probs=255.2 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEE Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 145 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~ 145 (432) ||++|+++++.+++ .+|+++++|+.+||++|++.+||+.++.+++++||||++++++..|.+.+|+|++|++|++ T Consensus 1 ia~l~~~~~~~~~~-----~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l~~~~v~v 75 (278) T protein:vir:78 1 MASLPLKMYEDYKV-----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (278) T ss_pred CccceeEEEecCcc-----cccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEECCceeEE Confidence 99999999986653 3599999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 146 YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) ..+.++. ...+.....+|....|+++||||+|++++.++++|.||+.++..++....++++++...+.+ .++++ T Consensus 76 ~~~~~~~----~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i 149 (278) T protein:vir:78 76 LIENQSR----ELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PDSFM 149 (278) T ss_pred EEcCCCc----eEEEEEEcCCceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CCcEE Confidence 8876542 22233445667788999999999998888999999999999999999999999987665555 47899 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 226 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) +..+..+++++.++++++|++.+. ++|+++++++|++|+++++++.|++++|.+++++++||++|||||.+||..++ T Consensus 150 ~~~~~~l~~e~~~~~~~~~~~~~~---~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~ 226 (278) T protein:vir:78 150 LKYGSNVGKEKRQQVLEDFKQYYE---ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSN 226 (278) T ss_pred EEeCCCCCHHHHHHHHHHHHHHhc---cCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCC Confidence 999999999999999999998764 57899999999999999999999999999999999999999999999999999 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhh Q lcl|Aclame:pro 306 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 357 (432) Q Consensus 306 ~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 357 (432) +|++|.+++.+.|++.||+|+++.|+++|++++|++.++..|++++||.+.| T Consensus 227 ~~~sn~~~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 227 TNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 9999999999999999999999999999999999999999999999999998 No 90 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=1.3e-54 Score=315.96 Aligned_cols=344 Identities=13% Similarity=0.117 Sum_probs=252.6 Q ss_pred CchHHH--HHHhcccccccccccc----ccCCchHHHHHhhcCCcCcc---------cc-cHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDS--VKKFFNFEKRQTSQVI----ELNKDDEKLLEWLGISPSTI---------SV-KGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~--l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~---------~v-~~~~a~~~~~v~~~i~~ia~ 64 (432) |+-..+ .++......++..... ..+.......-.||...+.. .+ ....+++.|..+.|+..+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~~~ 80 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcCCceeecchhhHHHHHHHHhccchhccCcCHHHHHHHHh Confidence 664321 1111000000000000 00000000000111110000 00 00113344444555544433 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 144 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~ 144 (432) .- + ..+.....+|++..++ .+||+++|+++|++ ++.+++++||+|++++++..|++.+|+|++|..|+ T Consensus 81 ~~---~-------~h~~~~~~~~n~l~l~-~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~ 148 (368) T protein:vir:79 81 AA---A-------HHSSAVYVKRNILVST-FIPHPLLSRATFER-LVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVR 148 (368) T ss_pred hc---c-------ccchhhhhhcchhhhh-cCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcCCCCEEEEEEeCcccce Confidence 22 1 1122334567777655 59999999999975 78899999999999999999999999999999998 Q ss_pred EEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcce Q lcl|Aclame:pro 145 VYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKG 224 (432) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 224 (432) +..+.. .++....++..+.|++++|||+|.+.+.++.+|+||+.++...+.+..++..+..++|+||++|++ T Consensus 149 ~~~~~~--------~~~~~~~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~g 220 (368) T protein:vir:79 149 RGLDLN--------TYFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGF 220 (368) T ss_pred eeccCC--------EEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 765542 234455677888999999999998888999999999999999999999999999999999999999 Q ss_pred EEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChh Q lcl|Aclame:pro 225 LVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMH 298 (432) Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~ 298 (432) ++..++ .+++++.++++++|++ +.|..|+|+++|+ ++|++|++++.++.|+||++.+++++++||++|||||. T Consensus 221 il~~~~~~l~~e~~~~lk~~~~~-~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~ 299 (368) T protein:vir:79 221 ILYMTDAAQKQEDVDTLREAMKS-AKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQ 299 (368) T ss_pred EEEeCCCCCCHHHHHHHHHHHHH-hcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHH Confidence 998864 6899999999999987 6788899999998 68999999999999999999999999999999999999 Q ss_pred hccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 299 QLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 375 (432) Q Consensus 299 ~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 375 (432) ++|..+++ +++|.+++.+.|++++|.|+++.|+ +++.++. . .+++|+...|++.|.+.++....+- + T Consensus 300 llGi~~~~t~~~sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~-~------e~~rF~~~~l~~~D~~a~a~~~~rs--a 368 (368) T protein:vir:79 300 LMGIIPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIG-D------EVVRFAPYALGGHDQPAAAPGGQRS--A 368 (368) T ss_pred HccccCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccC-c------ceeeechhHhhcccccccCCccccc--C Confidence 99986654 4899999999999999999999998 5776542 2 2578999999999998877632221 1 No 91 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=1.8e-52 Score=304.31 Aligned_cols=321 Identities=15% Similarity=0.156 Sum_probs=242.4 Q ss_pred CchHHHHHHhccccc-------cccccccccCCchH-------HHHH----hhcCCcCcccccHHH----HhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-------RQTSQVIELNKDDE-------KLLE----WLGISPSTISVKGKN----ALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~----~~g~~~~~~~v~~~~----a~~~~~v~~~ 58 (432) |+-...-++.-.... .........+..++ .+.+ |+......-+++... .-.++...+| T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~~~~h~s~ 105 (376) T protein:vir:10 26 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 105 (376) T ss_pred chhccCCCcccchhhhhHhhhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHHhhhh Confidence 654322111000000 00001111111111 0111 111111111233211 1123444555 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) |...++.+++ .-+||+++|+.+|++ ++.+++++||+|++++++..|++.+|+|+ T Consensus 106 l~~k~n~l~~-------------------------~~~Pnp~lT~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~pl 159 (376) T protein:vir:10 106 LFFKANVLAS-------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 159 (376) T ss_pred HHHHhHHHHh-------------------------ccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 5544443322 136999999999985 56789999999999999999999999999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) +|.+|++..+.+. ++....++....|+++||||+|.+.+.++.+|+|++.++...+.+..+++++..++|+| T Consensus 160 ~~~~vr~~~d~~~--------~~~~~~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~N 231 (376) T protein:vir:10 160 LAKYVRRKADFNG--------FVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 231 (376) T ss_pred CCcceEEEeeCCe--------EEEEEcCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 9999998776542 33445567778899999999999888899999999999999999999999999999999 Q ss_pred cCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 219 GLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) |++|++++..++ .+++++.++++++|++ ..|..|.++++++ ++|++|++++.++.|+||+|.+++++++||++ T Consensus 232 Ga~pggIl~~~d~~l~~e~~~~lr~~~~~-~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~a 310 (376) T protein:vir:10 232 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 310 (376) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHH Confidence 999999998864 6899999999999987 6788899999988 57999999999999999999999999999999 Q ss_pred hcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 364 (432) Q Consensus 293 ~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 364 (432) |||||.++|..+. +++++.+++.+.|++++|.|+++.|+ +++.++.. ..++|+...|++.|.++ T Consensus 311 f~VPp~llGi~~~~t~~~sn~eq~~~~f~~~~L~Pl~~~ie-eln~~L~~-------~~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 311 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFA-ELNDWLGE-------EVVRFDDYEIPPAPVAA 376 (376) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHH-HHHhhccc-------cccccChhHhhcccccC Confidence 9999999998654 46899999999999999999999998 47776532 25889999999999887 No 92 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=6.2e-52 Score=301.33 Aligned_cols=323 Identities=13% Similarity=0.088 Sum_probs=240.8 Q ss_pred CchHHHHHHhccccccccccccccC-Cc-----hHHHHH----hhcC--CcCcccccHHHH----hccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELN-KD-----DEKLLE----WLGI--SPSTISVKGKNA----LKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~-~~-----~~~~~~----~~g~--~~~~~~v~~~~a----~~~~~v~~~i~~ia~ 64 (432) |. .-+...-...........++. .+ ...+.+ |+.. ....-+++.... -.++...+||....+ T Consensus 1 ~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~l~~~n~~h~~~i~~k~N 78 (348) T protein:vir:26 1 MT--EQLIHSHTTDGTESKSVYSFDPNPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAEIANANGYHGSLLKARAN 78 (348) T ss_pred CC--ccccchhhccccCCceEEEecCCCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHHHHhhhhhhhhhHhhhhh Confidence 33 111111111111110111110 00 001111 2211 111113333222 134555666655554 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 144 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~ 144 (432) .+++ .-+||+++|+.+|++. +.+++++||+|++++|+..|++.+|+|++|..|+ T Consensus 79 ~l~~-------------------------~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~ 132 (348) T protein:vir:26 79 YVAG-------------------------RFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMR 132 (348) T ss_pred HHhh-------------------------cccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeE Confidence 4432 1369999999999765 5799999999999999999999999999999998 Q ss_pred EEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcce Q lcl|Aclame:pro 145 VYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKG 224 (432) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 224 (432) +..++. +|.+..+|..+.|++++|||+|.+.+.++.+|+|++.++...+.+..++..+..++|+||++|++ T Consensus 133 ~~~d~~---------~~~~~~~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~ 203 (348) T protein:vir:26 133 KRKNGD---------FVQLLRNNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGF 203 (348) T ss_pred eeecCc---------EEEEEecCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 866542 34555678888999999999998888899999999999999999999999999999999999999 Q ss_pred EEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChh Q lcl|Aclame:pro 225 LVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMH 298 (432) Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~ 298 (432) |+..++ .+++++.++++++|++. .|..|.++++++ ++|+++++++.+++|+||++.+++++++||++|||||. T Consensus 204 Il~~~~~~ls~e~~~~lk~~~~~~-~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~ 282 (348) T protein:vir:26 204 IFYATDPNLSEADEKALKEKIASS-KGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAG 282 (348) T ss_pred EEEecCCCCCHHHHHHHHHHHHHh-cCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHH Confidence 998765 68999999999999986 577889999998 78999999999999999999999999999999999999 Q ss_pred hccCcc--ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhh-hhhHHHH Q lcl|Aclame:pro 299 QLNDLS--KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL-RADIKTR 365 (432) Q Consensus 299 ~l~~~~--~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~-~~d~~~~ 365 (432) ++|... .+++++.+++.+.|++++|.|+++.|+++||++++.+. +.+++||++... +.+..+. T Consensus 283 llGi~~~~~~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~----~~~~~fdl~~~~e~~~~~a~ 348 (348) T protein:vir:26 283 MGGMLPQQGANVPDPLKVSQVYDFYEVIPVCKRFMDAVNNDPEIPD----NLKLKFNLNPGVESANGSAV 348 (348) T ss_pred HccccCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC----ccEEEEecCcccccchhhcC Confidence 998643 36899999999999999999999999999998876443 456778776532 2222211 No 93 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=1.5e-51 Score=299.29 Aligned_cols=321 Identities=15% Similarity=0.164 Sum_probs=238.9 Q ss_pred CchHHHHHHhccccc-------cccccccccCCchH-------HHHHhhcCCcCcc----cccHHHH----hccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-------RQTSQVIELNKDDE-------KLLEWLGISPSTI----SVKGKNA----LKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~g~~~~~~----~v~~~~a----~~~~~v~~~ 58 (432) |+-...-++.-.... ++.......+..++ .+.+..+....+. +++.... -.++...+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:79 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhhhhh Confidence 553221111000000 00000111111111 0111111111110 2222111 112333333 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) |...++.+++ .-+||+++|.++|+ .++.+++++||+|++++++..|++.+|+|+ T Consensus 81 l~~k~n~l~~-------------------------~~~Pnp~~t~~~f~-~~v~d~ll~Gnay~~~~r~~~G~~~~L~~l 134 (351) T protein:vir:79 81 LFFKANVLAS-------------------------TFRPHRWLSRHAFE-RWALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHHhh-------------------------cccCCCCCCHHHHH-HHHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 3332222211 23799999999996 567899999999999999999999999999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) +|.+|++..+.+. ++....++....|++++|||+|.+.+.++.||+|++.++..++.+..+++.+..++|+| T Consensus 135 ~~~~v~~~~~~~~--------~~~~~~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~N 206 (351) T protein:vir:79 135 LAKYVRRKADFSG--------FVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 206 (351) T ss_pred CCcceeeeecCCe--------EEEEecCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 9999998766542 34556677788899999999999988899999999999999999999999999999999 Q ss_pred cCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 219 GLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) |++|++++..++ .+++++.++++++|++ ..|..|.++++++ ++|++|++++.++.|+||++.+++++++||++ T Consensus 207 Ga~pg~il~~~~~~ls~e~~~~lk~~~~~-~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a 285 (351) T protein:vir:79 207 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 285 (351) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHH Confidence 999999998765 6899999999999986 5788899999988 58999999999999999999999999999999 Q ss_pred hcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 364 (432) Q Consensus 293 ~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 364 (432) |||||.++|..+. +++++.+++.+.|++++|.|+++.|++ ++.++ .. ..++|+...|++.|.++ T Consensus 286 ~~VPp~llGi~~~~t~~~~n~e~~~~~f~~~~l~Pl~~~ie~-ln~~l-g~------~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 286 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWL-GD------EVVTFDDYEIPPAPVAA 351 (351) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhc-Cc------ceeeeChhhhccccccC Confidence 9999999998655 468999999999999999999999985 76543 22 24789999999999887 No 94 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=2.8e-51 Score=297.73 Aligned_cols=321 Identities=15% Similarity=0.165 Sum_probs=238.7 Q ss_pred CchHHHHHHhccccc-------cccccccccCCchH-------HHHHhhcCCcCcc----cccHHHHh----ccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-------RQTSQVIELNKDDE-------KLLEWLGISPSTI----SVKGKNAL----KVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~g~~~~~~----~v~~~~a~----~~~~v~~~ 58 (432) |+-...-++.-.... ++.......+..++ .+.+..+....+. +++..... .++...+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:78 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhhhhh Confidence 553221111000000 00001111111111 0111111111110 22221111 12333334 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) |...++.+++ .-+||+++|.++|++ ++.+++++||+|++++++..|++.+|+|+ T Consensus 81 l~~k~n~l~~-------------------------~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl 134 (351) T protein:vir:78 81 LFFKANVLAS-------------------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHHhh-------------------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 3332222211 237999999999975 56789999999999999999999999999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) ++..|++..+.+. ++....++....|++++|||+|.+.+.++.+|+|++..+...+.+..++..+..++|+| T Consensus 135 ~~~~v~~~~~~~~--------~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~N 206 (351) T protein:vir:78 135 LAKYVRRKADFSG--------FVYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYEN 206 (351) T ss_pred cCcceEEeeeCCe--------EEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 9999998776542 33444567788999999999999888999999999999999999999999999999999 Q ss_pred cCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 219 GLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) |++|++++..++ .+++++.++++++|++ ..|..|+++++++ ++|+++++++.++.|+||+|.+++++++||++ T Consensus 207 Ga~pggIl~~~~~~ls~e~~~~lr~~~~~-~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a 285 (351) T protein:vir:78 207 GSHAGFILYMTDAAQKQDDVDNMRDALKN-AKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAA 285 (351) T ss_pred cCCCceEEEecCCCCCHHHHHHHHHHHHH-hcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHH Confidence 999999998865 6899999999999986 5788899999988 57999999999999999999999999999999 Q ss_pred hcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 364 (432) Q Consensus 293 ~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 364 (432) |||||.++|..+. +++++.+++.+.|++++|.|+++.|++ ++.++ .. .+++|+...|++.|.++ T Consensus 286 ~~VPp~llGi~~~~t~~~sn~e~~~~~f~~~~l~P~~~~iee-~n~~l-~~------~~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 286 HRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWL-GD------EVVRFDDYEIPPAPVAA 351 (351) T ss_pred hCCCHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhc-Cc------cceecChhhhccccccC Confidence 9999999997655 458999999999999999999999985 66554 22 25889999999999887 No 95 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=2.4e-51 Score=298.15 Aligned_cols=329 Identities=15% Similarity=0.156 Sum_probs=240.5 Q ss_pred CchHHHHHHhcccccc--ccccccccCCchH-------HHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR--QTSQVIELNKDDE-------KLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) |+-..+ +....... +.+.....+..++ .+.+.++..... ..+++-|..+.. +|+.+...+. T Consensus 1 m~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~pp~~~~~---la~l~~~~~~ 70 (346) T protein:vir:10 1 MKKQLR--KNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMY-----EKWYNPPMSFDG---LAKSLRSSTH 70 (346) T ss_pred CCcccC--CCCCcccccccccCeEEEecCCcceecCchhHHHHHHHhhcC-----CceEecCCCHHH---HHHHHHhhhh Confidence 553321 10000000 0001111111111 011111100000 001111111222 2222222222 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) +- ..-....|.+..++ .+||+++|+.+|++ ++.+++++||+|++++|+..|++.+|+|++|..|++..+.+. T Consensus 71 h~------~~i~~k~n~l~~l~-~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~~ 142 (346) T protein:vir:10 71 HE------SAIITKANILLSTC-EVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQ 142 (346) T ss_pred cc------hhhhhhhhhHHHHH-hCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCCe Confidence 21 11112236677666 48999999999986 568899999999999999999999999999999998776642 Q ss_pred ceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC- Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG- 230 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~- 230 (432) ..++.+..+|....|++++|||+|.+.+.++.+|+|++..+...+.+..+++++..++|+||++|++++..++ T Consensus 143 ------~~~~~~~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~ 216 (346) T protein:vir:10 143 ------FYYVPQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDA 216 (346) T ss_pred ------EEEEEEccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCC Confidence 2344556678889999999999998888899999999999999999999999999999999999999998764 Q ss_pred CCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 231 DLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 231 ~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) .+++++.++++++|++.+ |..|+|+++++. .|+++++++.++.|+||++.+++++++||++|||||.++|..+. T Consensus 217 ~l~~e~~~~i~~~~~~~~-g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~ 295 (346) T protein:vir:10 217 SQKQEDVENIRQQLKQSK-GVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPN 295 (346) T ss_pred CCCHHHHHHHHHHHHHhc-CccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCC Confidence 689999999999999865 668999999885 47899999999999999999999999999999999999987654 Q ss_pred --cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhH Q lcl|Aclame:pro 306 --ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 362 (432) Q Consensus 306 --~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 362 (432) +++++.+++.+.|++++|.|+++.|++ ++.++.. ..++|+...|++.|. T Consensus 296 ~~~~~s~~e~~~~~f~~~~l~P~~~~iee-~n~~L~~-------e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 296 NTGGFGNVADAAEVFFITEIEPLQERLKE-FNQWLGQ-------EVIKFKPSKLLQRTQ 346 (346) T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-------ceeeechhhhcccCC Confidence 368999999999999999999999985 6655432 257899999999887 No 96 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=6.2e-51 Score=295.84 Aligned_cols=323 Identities=14% Similarity=0.244 Sum_probs=236.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHH-------HHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhc--cCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEK-------LLEWLGISPSTISVKGKNALKVATVFACIKILSESVS--KLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia--~~~~ 71 (432) |+--...+ .-....++.......+..++. +.+.++-. ....+++.|.-+.++..+.++-+ +-++ T Consensus 1 m~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~~~pp~~~~~la~l~~a~~~h~s~i 73 (340) T protein:vir:98 1 MSKRKPRK-AVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVECI------SNGKWYEPPVSFSGLAKSLRSAVHHSSPI 73 (340) T ss_pred CCCCCCCc-cccccccCccceeEEEcCCceeecCcchhhhhhhhh------hcCceecCCCCHHHHHHHHHhccccchhh Confidence 65221100 000000111111111111110 11111100 01112333333333333322111 1111 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) +.++ +-+.. .-+||+++|..+|+ .++.+++++||+|++++++..|++.+|+|+++..|++..+.. T Consensus 74 ~~k~-----------n~l~~--~~~Pn~~lt~~~f~-~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~~~~- 138 (340) T protein:vir:98 74 YVKR-----------NVLAS--TYIPHPLLSRQDFS-RFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDS- 138 (340) T ss_pred hhhh-----------hHHhh--ccCCCCCCCHHHHH-HHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEcccCc- Confidence 1110 01111 13799999999996 466799999999999999999999999999999998765442 Q ss_pred ceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC- Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG- 230 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~- 230 (432) .+|.+..++....|+++||||+|.+.+.++.+|+|++..+...+.+..+++++..++|+||++|++++..++ T Consensus 139 -------~~~~~~~~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~ 211 (340) T protein:vir:98 139 -------VFWFVENFTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDP 211 (340) T ss_pred -------EEEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCC Confidence 345666788888999999999998888899999999999999999999999999999999999999998875 Q ss_pred CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 231 DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 231 ~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) .+++++.++++++|++ ..|..|.++++++ ++|++|++++.++.|+||++.+++++.+||++|||||.++|..+. T Consensus 212 ~ls~e~~~~lk~~~~~-~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~ 290 (340) T protein:vir:98 212 AQSATDVESLRDAMRN-SKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPE 290 (340) T ss_pred CCCHHHHHHHHHHHHH-hcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCC Confidence 6899999999999987 4788899999988 679999999999999999999999999999999999999997654 Q ss_pred --cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhh Q lcl|Aclame:pro 306 --ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRAD 361 (432) Q Consensus 306 --~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d 361 (432) +++++.+++.+.|++++|.|+++.|++ ++.++..+ .++|+...|++.| T Consensus 291 ~t~~~sn~e~~~~~f~~~~l~Pl~~~iee-~n~~L~~e-------~~rF~~~~l~~~d 340 (340) T protein:vir:98 291 NIGSLGDVEKVAKVFVRNELSPLQDRFRE-VNDWLGME-------VIRFKEYTLDNPE 340 (340) T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHHH-HHhccccc-------ccccCccccccCC Confidence 468999999999999999999999985 77765322 3679888888888 No 97 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=4.3e-50 Score=291.23 Aligned_cols=323 Identities=14% Similarity=0.162 Sum_probs=229.1 Q ss_pred CchHHHHHHhcc--cccc--------ccccccccCCchH-------HHHHhhcCCcCcccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFN--FEKR--------QTSQVIELNKDDE-------KLLEWLGISPSTISVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~~~--~~~~--------~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia 63 (432) |+-..+-+.... .... +.+.....+..++ .+.+.++.... ..+++-|.-+.++..+. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~y~~~~~~------~~~~~pp~~~~~la~~~ 74 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGDPMPVLDGRGILDYLECWPN------GRWYEPPLSMEGLAKSV 74 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccccceEEEEeCCceeecCcchhhHHHHHhhc------CccccCCCCHHHHHHHH Confidence 553321111000 0000 0000111111000 00000000000 00111111111111110 Q ss_pred --HhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCc Q lcl|Aclame:pro 64 --ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDAS 141 (432) Q Consensus 64 --~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~ 141 (432) +...+-+++.++ +-+.. .-+||+++|.++|++ ++.+++++||+|++++|+..|++.+|+|++|. T Consensus 75 ~~~~~h~~~l~~k~-----------n~l~~--~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~ 140 (350) T protein:vir:11 75 GSSVYLQSGLKFKR-----------NMLAK--TFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAK 140 (350) T ss_pred hhhhhhccchhhhh-----------hhhhh--cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCc Confidence 001111111110 00111 237999999999975 67799999999999999999999999999999 Q ss_pred ceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCC Q lcl|Aclame:pro 142 KVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQ 221 (432) Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 221 (432) +|++..++. .+|.+..++....|+++||||+|.+++.++.||+||+.++...+.+..++.++..++|+||++ T Consensus 141 ~vr~~~~~~--------~~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~ 212 (350) T protein:vir:11 141 YMRRGTDLE--------TFYQVRSWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSH 212 (350) T ss_pred eeEeeecCC--------eEEEEeeCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCC Confidence 999876553 245566778888999999999999888899999999999999999999999999999999999 Q ss_pred cceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 222 VKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGI 295 (432) Q Consensus 222 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gv 295 (432) |++++..++ .+++++.+++++.|++. .|..|+|+++++ ++|+++++++.++.|+||+|.+++++++||++||| T Consensus 213 ~~gil~~~~~~ls~e~~~~l~~~~~~~-~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~V 291 (350) T protein:vir:11 213 AGFILYMTDAAQNEEDIDALRTALKTA-KGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRV 291 (350) T ss_pred CceEEEecCCCCCHHHHHHHHHHHHHh-cCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCC Confidence 999999875 68999999999999885 677899999888 46899999999999999999999999999999999 Q ss_pred ChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhh Q lcl|Aclame:pro 296 KMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAI 357 (432) Q Consensus 296 p~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l 357 (432) ||.++|..+. +++++.+++.+.|++++|.|+++.|++ +++++..+ . ..+.+|+.+.| T Consensus 292 Pp~llGi~~~~t~~~sn~e~~~~~f~~~~L~P~~~~ie~-ln~~l~~~-~---~~F~~~~~~~l 350 (350) T protein:vir:11 292 YPQLMGVVPQNAGGFGSISDAAAVWASLELAPMQTRLQQ-VNEMIGEE-V---VRFAQFDAPGL 350 (350) T ss_pred CHHHhcccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcc-c---cccCcccccCC Confidence 9999997655 468999999999999999999999985 77765432 1 12445666666 No 98 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=3.1e-50 Score=292.00 Aligned_cols=321 Identities=11% Similarity=0.120 Sum_probs=232.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhh---ccCceEEEeec Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESV---SKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~i---a~~~~~~~~~~ 77 (432) |+--. ..+...........+.+.++ +..+....+..|+...-+.+ -..|+....-. T Consensus 1 m~~~~------------~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La 59 (337) T protein:vir:78 1 MTKRQ------------QQPAQAAASSPRPSVVFSMP---------EAIDPTAWMTDYTGVFYNPYGEYYQPPIDRKGLA 59 (337) T ss_pred CCCcc------------cCcccccccCceeEEEecCc---------ccccCcchhHhhhhhhhccCcceecCCCCHHHHH Confidence 44211 00000000000001111111 11122222333333322211 12233221100 Q ss_pred CCcceeeccchhHHhhhccccccCCHH----HHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccce Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSM----NFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 153 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~----~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~ 153 (432) +-......| ..+|..+||..++++ ++++.++.+++++||+|++++|+..|++.+|+|++|.+|++..++. T Consensus 60 -~l~~~~~~h--~~~L~~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d~~--- 133 (337) T protein:vir:78 60 -KVARANAHH--GAILMARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRREDGC--- 133 (337) T ss_pred -HHhhcchhh--hhHHHhhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeCCe--- Confidence 000001111 335667899766644 7899999999999999999999999999999999999998776542 Q ss_pred eccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CC Q lcl|Aclame:pro 154 NSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DL 232 (432) Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~ 232 (432) ++....++....|+++||||+|.+.+.++.+|+||+..+...+.+..+++++..++|+||++|++++..++ .+ T Consensus 134 ------~~~~~~~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l 207 (337) T protein:vir:78 134 ------FVYLQQGKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNM 207 (337) T ss_pred ------EEEEEcCCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCC Confidence 22334566778899999999998888899999999999999999999999999999999999999998765 68 Q ss_pred CHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc--- Q lcl|Aclame:pro 233 NEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS--- 304 (432) Q Consensus 233 ~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~--- 304 (432) ++++.+++++.|++ ..|..|.++++++ ++|++|++++.++.|+||++.+++++++||++|||||.++|... T Consensus 208 ~~e~~~~lk~~~~~-~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~ 286 (337) T protein:vir:78 208 DDDTEEEMKEMIAN-SKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNG 286 (337) T ss_pred CHHHHHHHHHHHHH-hcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCC Confidence 99999999999986 5677888988887 67899999999999999999999999999999999999998644 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhh Q lcl|Aclame:pro 305 KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL 358 (432) Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~ 358 (432) .+++++.+++.+.|++++|.|+++.|+++++.+++..... ..+++....++ T Consensus 287 ~~~~~n~e~~~~~f~~~~L~P~~~~ie~~~n~~ll~~~~~---~~f~~~~~~~~ 337 (337) T protein:vir:78 287 GGGLGDPEKYDATYARNEVLPLCELVQDAINSAGLPRALW---VTFRETIGAAV 337 (337) T ss_pred cCccccHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhc---eeccccccccC Confidence 3577889999999999999999999999999877654321 23444444444 No 99 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=7.8e-50 Score=289.80 Aligned_cols=324 Identities=14% Similarity=0.210 Sum_probs=229.0 Q ss_pred CchHHHHHHhccccc--cccccccccCCchH-------HHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHH--hhccC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK--RQTSQVIELNKDDE-------KLLEWLGISPSTISVKGKNALKVATVFACIKILSE--SVSKL 69 (432) Q Consensus 1 Mg~~~~l~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~--~ia~~ 69 (432) |+-...-+..-.... .........+..++ .+.+.++-... ..+++=|.-+.++..+.+ ..-+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~------~~~~~pp~~~~~la~~~~a~~~h~s 74 (344) T protein:vir:56 1 MSKKKGKTPQPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISN------GRWYEPPVSFTGLAKSLRAAVHHSS 74 (344) T ss_pred CCCCCCCCCchhhHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhhc------CccccCCCCHHHHHHHHhhhhhhCc Confidence 543211000000000 00000111111110 00110000000 011111222222222211 11122 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcC Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 149 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~ 149 (432) +++.++ +-+.. .-+||+++|+.+| +.++.+++++||+|++++|+..|++.+|+|+++..|++..++ T Consensus 75 ~i~~k~-----------n~l~~--~~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~ 140 (344) T protein:vir:56 75 PIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred cceehh-----------hhHHh--hcCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecC Confidence 333321 11111 2379999999999 678899999999999999999999999999999999987655 Q ss_pred ccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 150 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) + .+|....+|....|++++|||+|.+.+.++.+|+||+.++...+.+..+++++..++|+||++|++++..+ T Consensus 141 ~--------~~~~~~~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~ 212 (344) T protein:vir:56 141 D--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVT 212 (344) T ss_pred C--------EEEEEecCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 3 24556677888899999999999888889999999999999999999999999999999999999999876 Q ss_pred C-CCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC Q lcl|Aclame:pro 230 G-DLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~ 302 (432) + .+++++.++++++|++.. |. |+++++++ ++|+++++++.++.|+||+|.+++++++||++|||||.++|. T Consensus 213 d~~ls~e~~~~lk~~~~~~~-g~-~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi 290 (344) T protein:vir:56 213 DAVQDRNDIEMLRENMVKSK-GR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGG 290 (344) T ss_pred CCCCCHHHHHHHHHHHHHhc-CC-CCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhcc Confidence 5 689999999999999875 33 67888887 579999999999999999999999999999999999999997 Q ss_pred ccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhH Q lcl|Aclame:pro 303 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 362 (432) Q Consensus 303 ~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 362 (432) .+. +++++.+++.+.|++++|.|+++.|++ ++.++..+ .++|+.-.|...|- T Consensus 291 ~~~~t~~~~n~eq~~~~f~~~tL~Pl~~~ie~-~n~~l~~~-------~~~F~~y~l~~~~~ 344 (344) T protein:vir:56 291 KPENVGSLGDIEKVAKVFVRNELIPLQDRIRE-INGWIGQE-------VIRFKNYSLDTDNG 344 (344) T ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHHHH-HHhhhccc-------cccCCCccccccCC Confidence 655 458999999999999999999999985 77766533 24454444433332 No 100 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=6.7e-50 Score=290.18 Aligned_cols=332 Identities=13% Similarity=0.085 Sum_probs=238.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHH---hhcCCcCcccccHHHHhccHHHHHHHHHHHHh--hccCceEEEe Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLE---WLGISPSTISVKGKNALKVATVFACIKILSES--VSKLPLKIYQ 75 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~--ia~~~~~~~~ 75 (432) |.-....-.. .....+......++..++.... .++... .....+++-|.-+.++..+.+. ..+-.++.+ T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~----~~~~~~~epp~~~~~la~l~~~~~~h~~~i~~k- 74 (345) T protein:vir:37 1 MKTNVKTDNK-KGIVIAPINDRTFSLNEISASPALDYVGIGF----DENYNCYLPPVNRHALAKLPHQNAQHGGILHSR- 74 (345) T ss_pred CCCCccccch-hhcccCcceeEEeecCCcccccchhhhhhhh----cCCccccCCCCCHHHHHHHhhcccccccceeee- Confidence 3322100000 0000011111222222222111 111000 0011122323333333332211 111112211 Q ss_pred ecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceec Q lcl|Aclame:pro 76 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 155 (432) Q Consensus 76 ~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~ 155 (432) +.... ..-+||+.+|+++|++ ++.+++++||+|++++|+..|++.+|+|+++..|++..+..... T Consensus 75 -----------~n~l~-~~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~~-- 139 (345) T protein:vir:37 75 -----------ANMVS-SLYEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSY-- 139 (345) T ss_pred -----------chHHH-hhccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCeeE-- Confidence 11111 1237999999999975 56789999999999999999999999999999999887765322 Q ss_pred cceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC-CCCCH Q lcl|Aclame:pro 156 KTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV-GDLNE 234 (432) Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~~~~ 234 (432) ...++....+|....|+++||||+|.+.+.++.+|+|++.++..++.+..++.++..++|+||++|++++..+ ..+++ T Consensus 140 -~~~~~~~~~~g~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~ 218 (345) T protein:vir:37 140 -LMKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTE 218 (345) T ss_pred -EEEEeEecCCceEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCH Confidence 2223444566778899999999999888889999999999999999999999999999999999999999886 46899 Q ss_pred HHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc--cc Q lcl|Aclame:pro 235 DAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--AT 307 (432) Q Consensus 235 ~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~--~~ 307 (432) ++.++++++|++. .|..|.++++++ ++|+++++++.++.|+||+|.+++++++||++|||||.++|..+. ++ T Consensus 219 e~~~~lk~~~~~~-~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~ 297 (345) T protein:vir:37 219 EMEEEIARKISES-KGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGG 297 (345) T ss_pred HHHHHHHHHHHHh-cCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCC Confidence 9999999999884 677788888887 589999999999999999999999999999999999999987544 57 Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhh Q lcl|Aclame:pro 308 LNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILR 359 (432) Q Consensus 308 ~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~ 359 (432) +++.+++.+.|++++|.|+++.|++++++.+ +...+..++|+...|.+ T Consensus 298 ~~~~e~~~~~f~~~~l~P~~~~ie~~ln~~~----~~~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 298 LGDPLKYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cCCCcceEEecchhhcC Confidence 8999999999999999999999999998632 23345678898777765 No 101 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=1.1e-49 Score=288.93 Aligned_cols=322 Identities=14% Similarity=0.221 Sum_probs=232.7 Q ss_pred CchHHHHHHhcccccc----ccccccccCCchHH-------HHHhhcCCcCcccccHHHHhccHHHHHHHHHH--HHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR----QTSQVIELNKDDEK-------LLEWLGISPSTISVKGKNALKVATVFACIKIL--SESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~----~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~i--a~~ia 67 (432) |+ .+.++......+ ........+..++. +.+.++-... ..+++-|.-+.++..+ |+... T Consensus 1 m~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~------~~~~~pp~~~~~la~~~~a~~~h 72 (344) T protein:vir:60 1 MS--KKKGKTLQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISN------GRWYEPPISFTGLAKSLRAAVHH 72 (344) T ss_pred CC--cccCCCCCchHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhhc------CccccCCCCHHHHHHHHHhhhhh Confidence 55 444333322111 11111111111110 1111110000 0111111112221111 11111 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) +-+++.++ +-+.. .-+||+++|+.+| +.++.+++++||+|++++|+..|++.+|+|+++..|++.. T Consensus 73 ~~~i~~k~-----------n~l~~--~~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~ 138 (344) T protein:vir:60 73 SSPIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGV 138 (344) T ss_pred ccchhhhh-----------hHHHh--hccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEee Confidence 22222211 11111 2379999999998 6788999999999999999999999999999999999876 Q ss_pred cCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE Q lcl|Aclame:pro 148 DDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ 227 (432) Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 227 (432) +++ .+|.+..++....|++++|||++.+.+.++.+|+||+..+..++.+..+++++..++|+||++|++++. T Consensus 139 ~~~--------~~~~v~~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~ 210 (344) T protein:vir:60 139 EED--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMY 210 (344) T ss_pred cCC--------eEEEEccCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 653 245566778888999999999998888899999999999999999999999999999999999999999 Q ss_pred eCC-CCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhc Q lcl|Aclame:pro 228 YVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQL 300 (432) Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l 300 (432) .++ .+++++.++++++|++.++ . ++++.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.++ T Consensus 211 ~~~~~ls~e~~~~ik~~~~~~~g-~-~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~ll 288 (344) T protein:vir:60 211 VTDAVQDRNDIEMLRENMVKSKG-R-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLM 288 (344) T ss_pred ecCcCCCHHHHHHHHHHHHHhcC-C-CCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHh Confidence 864 6899999999999998764 3 56777776 5799999999999999999999999999999999999999 Q ss_pred cCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhH Q lcl|Aclame:pro 301 NDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 362 (432) Q Consensus 301 ~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 362 (432) |..+.+ ++++.+++.+.|++++|.|+++.|+ +++.++..+ .++|+...+...|. T Consensus 289 Gi~~~~t~~~~n~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~~-------~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 289 GGKPENVGSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-------VIRFKNYSLDTDNG 344 (344) T ss_pred cccCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-------ccccCccccCCCCC Confidence 976544 5899999999999999999999998 588765321 35566666655555 No 102 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=1.8e-49 Score=287.80 Aligned_cols=330 Identities=13% Similarity=0.093 Sum_probs=235.2 Q ss_pred CchHHHHHHhccccccc--cccccccCCchHHH---HHhhcCCcCcccccHHHHhccHHHHHHHHHH--HHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQ--TSQVIELNKDDEKL---LEWLGISPSTISVKGKNALKVATVFACIKIL--SESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~i--a~~ia~~~~~~ 73 (432) |.-. ++.......+ ..+...++..++.. .+..+... .....+++-|.-+.++..+ ++...+-++++ T Consensus 1 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~----~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~ 73 (345) T protein:vir:37 1 MKTN---VKTDNKKGIVIAPINDRTFSLSEITASPALDYVGIGF----DENYNCYLPPVNRHALAKLPHQNAQHGGILHS 73 (345) T ss_pred CCcc---ccccchhhhcCCCceEEEeecCCcccchhhcccceee----ecCCccccCCCCHHHHHHHhhcchhhcchhhh Confidence 3322 1111000001 11111222222211 11111110 0001122222222222211 11111111111 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccce Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 153 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~ 153 (432) ++ +-+ ..+-+||+++|+.+|++ ++.+++++||+|++++|+..|++.+|+|++|..|++..+..... T Consensus 74 k~-----------n~l--~~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d~~~~~ 139 (345) T protein:vir:37 74 RA-----------NMV--SATYEGGKALSKMEMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKDGGYSY 139 (345) T ss_pred hh-----------hHH--hhccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeecCCeeE Confidence 10 001 12347999999999975 55789999999999999999999999999999999877665322 Q ss_pred eccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CC Q lcl|Aclame:pro 154 NSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DL 232 (432) Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~ 232 (432) . ..++.+...|....|+++||||+|.+.+.++.+|+|++..+...+.+..++.++..++|+||++|++|+..++ .+ T Consensus 140 ~---~~~~~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~~~l 216 (345) T protein:vir:37 140 L---MKKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDL 216 (345) T ss_pred E---EeeeeeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC Confidence 2 2233445567788999999999998888899999999999999999999999999999999999999998764 68 Q ss_pred CHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc-- Q lcl|Aclame:pro 233 NEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-- 305 (432) Q Consensus 233 ~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~-- 305 (432) ++++.++++++|++.+++ .|.+.++++ ++|+++++++.++.|+||++.+++++.+||++|||||.++|..+. T Consensus 217 ~~e~~~~lk~~~~~~~g~-~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~~~t 295 (345) T protein:vir:37 217 TEEMEEEIARKISESKGV-GNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNT 295 (345) T ss_pred CHHHHHHHHHHHHHhcCc-cccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhccccCCC Confidence 999999999999998755 566666555 568999999999999999999999999999999999999987654 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhh Q lcl|Aclame:pro 306 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILR 359 (432) Q Consensus 306 ~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~ 359 (432) +++++.+++.+.|++++|.|+++.|++++|+.+ +...+.+++||...|++ T Consensus 296 ~~~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~~----e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 296 GGLGDPLKYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHhhhhh----ccCCcceEEECchhhcC Confidence 468999999999999999999999999998632 23456789999999887 No 103 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=3.6e-50 Score=291.64 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=199.1 Q ss_pred CchHHHHHHhcccccccc-ccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQT-SQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) ||||.++ .++.. ............+..+.+ .....|+.+.|+++|+|++||++||++||++|++++++++ T Consensus 1 MglF~~~------~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~- 71 (251) T protein:vir:46 1 MGIFYKN------EKRDLQYNEDDLQMMVQTLPSFQG--TKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ- 71 (251) T ss_pred CCccccc------cccccCCCccchhhhhhhhccccC--cCcceechhhhhccHHHHHHHHHHHHhHhhCceEEeeCcc- Confidence 9998543 12211 111111111111112222 2344688999999999999999999999999999997553 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecccee Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 159 (432) ...+||++++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|++|++..++++...+.. . T Consensus 72 ---~~~~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~-~ 147 (251) T protein:vir:46 72 ---INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFH-Q 147 (251) T ss_pred ---ccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCcEEEEE-E Confidence 345799999999999999999999999999999999999999999999999999999999999988764432211 1 Q ss_pred EEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHHH Q lcl|Aclame:pro 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKK 238 (432) Q Consensus 160 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~ 238 (432) ......+|..+.|+++||||||.+ +.++.+|.||+.++..++.+..++++++.++|+||++|+|++++++.+ ++++.+ T Consensus 148 ~~~~~~~g~~~~~~~~diiH~r~~-~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~ 226 (251) T protein:vir:46 148 RIDSNGNNIERNVKFEDMLDIKFY-SLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARD 226 (251) T ss_pred EeccCCcceeEEECCccEEEecCc-CCCCeeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHH Confidence 112234566789999999999965 568899999999999999999999999999999999999999999887 566789 Q ss_pred HHHHHHHHHhcccccccceeecCCCcee Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGYQF 266 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~ 266 (432) ++++.|+++++|.+|+|++++ |++- T Consensus 227 ~~~~~~~~~~~g~~n~g~~~~---gm~~ 251 (251) T protein:vir:46 227 RAREEFPKVLVELNKLGKLSY---SMNQ 251 (251) T ss_pred HHHHHHHHHhcCccccccccc---ccCC Confidence 999999999999999998766 3322 No 104 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=1.7e-49 Score=287.97 Aligned_cols=324 Identities=14% Similarity=0.207 Sum_probs=230.5 Q ss_pred CchHHHHHHhccccc--cccccccccCCchHH-------HHHhhcCCcCcccccHHHHhccHHHHHHHHHH--HHhhccC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK--RQTSQVIELNKDDEK-------LLEWLGISPSTISVKGKNALKVATVFACIKIL--SESVSKL 69 (432) Q Consensus 1 Mg~~~~l~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~i--a~~ia~~ 69 (432) |+-...-+..-.... ...+.....+..++. +.+.++-.. -..+++=|.-+.++..+ |+...+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~------~~~~~~pp~~~~~la~~~~a~~~h~~ 74 (344) T protein:vir:20 1 MSKKKGKTPQPAAKTMTASGPKMEAFTFGEPVPVLDRRDILDYVECIS------NGRWYEPPVSFTGLAKSLRAAVHHSS 74 (344) T ss_pred CCcccCCCCcchhhhhhccCCceEEEEcCCceEecCcchhhhhhhhhh------cCceecCCCCHHHHHHHHhhhhhhCc Confidence 553321100000000 000011111111100 011110000 01111112222222222 2222223 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcC Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDD 149 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~ 149 (432) +++.++ +-+.. .-+||+++|+.+| +.++.+++++||+|++++|+..|++.+|+|+++..|++..+. T Consensus 75 ~i~~k~-----------n~l~~--~~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~ 140 (344) T protein:vir:20 75 PIYVKR-----------NILAS--TFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred cceehh-----------hhHHH--hccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecC Confidence 333321 11111 2379999999998 678899999999999999999999999999999999986655 Q ss_pred ccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 150 VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) + .++.+..++....|+++||||+|.+.+.++.+|+||+..+..++.+..+++++..++|+||++|++++..+ T Consensus 141 ~--------~~~~~~~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~ 212 (344) T protein:vir:20 141 D--------VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVT 212 (344) T ss_pred C--------EEEEEccCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 3 24556677888899999999999888889999999999999999999999999999999999999999876 Q ss_pred -CCCCHHHHHHHHHHHHHHhcccccccceeec------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC Q lcl|Aclame:pro 230 -GDLNEDAKKVFRENFESMSSGLQNSHRIALM------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~ 302 (432) ..+++++.++++++|++.+++ ++++.+++ ++|++|++++.++.|+||+|.+++++++||++|||||.++|. T Consensus 213 d~~l~~e~~~~ik~~~~~~~g~--~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi 290 (344) T protein:vir:20 213 DAVQDRNDIEMLRENMVKSKGR--NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGG 290 (344) T ss_pred CcCCCHHHHHHHHHHHHHhcCC--CCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcc Confidence 468999999999999987543 56777776 479999999999999999999999999999999999999997 Q ss_pred ccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhH Q lcl|Aclame:pro 303 LSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADI 362 (432) Q Consensus 303 ~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~ 362 (432) .+. +++++.+++.+.|++++|.|+++.|+ +++.++..+ .++|+...|...|. T Consensus 291 ~~~~t~~~~n~e~~~~~f~~~~l~P~~~~~e-~in~~lg~~-------~i~F~~~~l~~~d~ 344 (344) T protein:vir:20 291 KPENVGSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQE-------VIRFKNYSLDTDND 344 (344) T ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCc-------ccccCccccccCCC Confidence 654 45899999999999999999999998 577654322 35676666655554 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=3.6e-42 Score=247.78 Aligned_cols=211 Identities=12% Similarity=0.145 Sum_probs=173.0 Q ss_pred eEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCc Q lcl|Aclame:pro 143 VTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQV 222 (432) Q Consensus 143 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 222 (432) |++..++..+... ....+..+|....++++||+|+|.+.+.++++|+||+.+++.++....++++++.++|+||++| T Consensus 1 ~r~~~dg~~~y~~---~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p 77 (219) T protein:vir:98 1 MRVCKDGNYKYLM---KKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHM 77 (219) T ss_pred CceeecCeEEEEE---ecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCC Confidence 2332222111000 1122334567788999999999998889999999999999999999999999999999999999 Q ss_pred ceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 223 KGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIK 296 (432) Q Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp 296 (432) +|++.+++ .+++++.+++++.|++. .|..|++.++++ ++|++|+++++++.|+||+|++++++++||++|||| T Consensus 78 ~gil~~~~~~l~~e~~~~~~~~~~~~-~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVP 156 (219) T protein:vir:98 78 GFILYSTDPDMTEEMEDEIAERIRDS-KGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFP 156 (219) T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHh-cCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCC Confidence 99998765 68999999999999885 566777777776 579999999999999999999999999999999999 Q ss_pred hhhccCc--cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhh Q lcl|Aclame:pro 297 MHQLNDL--SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRAD 361 (432) Q Consensus 297 ~~~l~~~--~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d 361 (432) |.+||.. +.++++|++++...|+++||.|+++.||++||++++.+. +.+++|+.+.+...+ T Consensus 157 p~~lG~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~----~~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 157 PGLSGIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKS----ALKVNFKQPEKRDKN 219 (219) T ss_pred HHHcccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC----ccEEeecCcccccCC Confidence 9999864 346799999999999999999999999999998866543 346677655543333 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.95 E-value=8.1e-29 Score=174.59 Aligned_cols=401 Identities=12% Similarity=0.087 Sum_probs=239.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |.+.|.+.++......... ..... ..++.+.....+ ...+.+++.++.+|+.+|+..-+.++.+...+.+. T Consensus 1 ~~~~D~~~~~~~~~g~~~~-~~~~~-------~~~~~~~~~~~l-~a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d~~~ 71 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQE-QTYYS-------PSLSLTDDLVQL-EALWRDNWIANKVCIKRPEDMVRNWREIYSNDLNS 71 (437) T ss_pred CchhhhhHhHHhcCCCccc-cceee-------cCccccccHHHH-HHHHHhCchhhHHhhcchHHhhcCCceEecCCCCH Confidence 9999998887532111000 00000 000111111111 12345789999999999999999999986432211 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---------CceEEEEEEcCcceEEEEc--C Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---------GKVQALWPIDASKVTVYID--D 149 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---------g~~~~l~~~~~~~v~~~~~--~ 149 (432) . ....+...+ .+-+ ..+-+...+.+.-++|.++++++.++. |.+..|.++++..|++... . T Consensus 72 ~---~~~~~~~~~-~~l~----~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~ 143 (437) T protein:vir:52 72 K---QLDLFTKFE-RSLK----LRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDD 143 (437) T ss_pred H---HHHHHHHHH-Hhhc----HHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhccccccccc Confidence 1 001112222 1222 234455566666789999999988653 6788999999998874221 1 Q ss_pred ccce-eccceeEEEecccCceEEEccceEEEEec---CCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 150 VGLL-NSKTKMWYVVNTGGQQRVLKPEEILHFKN---GITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~vih~~~---~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) +... .+.-..+|.+..++..+.+.++.||||.. +.+.+.+.|.|+++.+...+............++.+.... + T Consensus 144 dp~s~~fg~p~~y~v~~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~--v 221 (437) T protein:vir:52 144 DVLSPNFGRYSEYSILGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKID--I 221 (437) T ss_pred cccccccCcceEEEEecCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCC--c Confidence 1111 12233345555555667899999999963 3345677899999999999999999999999888776544 3 Q ss_pred EEeCC---CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC Q lcl|Aclame:pro 226 VQYVG---DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND 302 (432) Q Consensus 226 ~~~~~---~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~ 302 (432) +++++ .++....+.+.+.+.....+ .+.+++++++.+.+|++++.++.+.. +.......+||.+++||..+|.+ T Consensus 222 ~k~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~e~~~~~~sgl~--~~l~~~~~~iaaa~~iP~t~L~G 298 (437) T protein:vir:52 222 FKIAGLSDKIAAGMENEVASVISAVQEI-KSATNSLLLDAENEYDRKELTFTGLK--DLLTEFRNAVAGAADMPVTILFG 298 (437) T ss_pred eecchHHHHhcCCcHHHHHHHHHHHHHh-cCCCceEEEcCCcceEEEecCcCCHH--HHHHHHHHHHHHHhcCchhhhcC Confidence 44432 12211122233333322222 34578899999999999988877654 78889999999999999999987 Q ss_pred ccccccccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHH-------H Q lcl|Aclame:pro 303 LSKATLNNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE-------A 368 (432) Q Consensus 303 ~~~~~~~~~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~ 368 (432) ...+..++.++..+.|+. .-+.|+++.+.+.+-...+... ..++. |.+++|..++.+++++ + T Consensus 299 ~s~~Glasge~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~--~~~~~--~~f~pL~~~s~kekae~~~~~a~a 374 (437) T protein:vir:52 299 QSVSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGL--PADWW--FEFVPLTTVKQEQQINMLNTFATA 374 (437) T ss_pred cCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcce--EEeCCcCCcCHHHHHHHHHHHHHH Confidence 766666776766667666 4577777777776655544322 23444 4457887777655554 5 Q ss_pred HHHHHhCCCcCHHHHHHHhC----CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 369 YRTGIQGGFLKPNEARSKED----LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 369 ~~~~~~~g~~t~nE~R~~~g----l~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) +.+++++|+++++|+|+++. ++.++..|.--. .+..+......+..+..+. ++...+.+ T Consensus 375 ~~~~~~~g~i~~~e~r~~L~~~g~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 437 (437) T protein:vir:52 375 ANTLIQNGVLNEYQIANELRESGLFANISAEHIEEL-KNADEFAGNFEEPEKMEGA--QVQNSEDQ 437 (437) T ss_pred HHHHHhcCCCCHHHHHHHHHhcCCCCCCCccccccc-cCCCCCCCccCCCCCCCCC--CCCCCCCC Confidence 77889999999999999873 344443331110 1111111111111111111 11111111 No 107 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.91 E-value=1.9e-24 Score=150.61 Aligned_cols=410 Identities=10% Similarity=0.037 Sum_probs=224.3 Q ss_pred CchHHH---HHHhccccc--------ccccccc----c---------c-CCchHHHHHhhcCCcC-----------cccc Q lcl|Aclame:pro 1 MKIVDS---VKKFFNFEK--------RQTSQVI----E---------L-NKDDEKLLEWLGISPS-----------TISV 44 (432) Q Consensus 1 Mg~~~~---l~~~~~~~~--------~~~~~~~----~---------~-~~~~~~~~~~~g~~~~-----------~~~v 44 (432) ||+|.. .+.+..... +...... . . ......+....+.... .... T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (537) T protein:vir:10 25 VGIFGAGDDEKPFTRAQLVHQTMMAIRDHAIAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGH 104 (537) T ss_pred cCCCcccchhhHHHHHHhhhhccCCCCCccCcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccH Confidence 888732 111111110 0000000 0 0 0000111111111100 0000 Q ss_pred cH-HHHhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEE Q lcl|Aclame:pro 45 KG-KNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYAN 123 (432) Q Consensus 45 ~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~ 123 (432) .. ..+.+++.++.+|+.+|+.+.+-++.+...+++..+. .....|.........+.. +...+.+..++|.++++ T Consensus 105 ~l~a~Y~~~~l~r~iVd~~A~d~~r~~~~i~~~~~~~~~~----~~~~~l~~~~~~l~~~~~-l~~a~~~~rlyG~~~i~ 179 (537) T protein:vir:10 105 QMCALIATHWLVNKACSQMPRDAMRKGYKIISDDGNELDP----KDAKFIDRYDRAFNIKKH-AIQFVRKGRIFGIRIAL 179 (537) T ss_pred HHHHHHHhCchhhhhhhhhhHHhhcCCceeecCCcccccH----HHHHHHHHHHHHhhHHHH-HHHHHHhcccccceEEE Confidence 11 2334789999999999999999999987654433221 122333333333333333 44455555668998887 Q ss_pred EeeC----------------CCCceEEEEEEcCcceEEEEc----Cc--cceeccceeEEEecccCceEEEccceEEEEe Q lcl|Aclame:pro 124 IEFD----------------RKGKVQALWPIDASKVTVYID----DV--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFK 181 (432) Q Consensus 124 ~~~~----------------~~g~~~~l~~~~~~~v~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~ 181 (432) +... ..|.+..|.+++|.++++... .+ ...++... +|. ..| +.|.++.|||+. T Consensus 180 i~v~~~D~~~~~~Pl~~~~i~kg~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~-~y~--v~g--~~iH~SRli~f~ 254 (537) T protein:vir:10 180 FKVDSPDPYYYEKPFNIDGVMPGAYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPT-YWL--ING--KKYHRSHLAIYI 254 (537) T ss_pred EeecCcCCcccccccccccccccceeEEEEechhhcccccchhhhccCCccccCCce-eee--ecC--eEecceeEEEec Confidence 6431 123456788999988876432 11 11222222 222 233 468999999996 Q ss_pred cCC------CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHHHHHHHHHHHHhcccccc Q lcl|Aclame:pro 182 NGI------TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVFRENFESMSSGLQNS 254 (432) Q Consensus 182 ~~~------~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~n~ 254 (432) ... +...+.|.|.++.+...+............++.........+.....+ ++++.. +++.....+.+|. T Consensus 255 g~~~p~~~~~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~v~k~~~~~~l~~~~~~~---~r~~~~~~~r~n~ 331 (537) T protein:vir:10 255 NDEVVDFLKPSYIYGGVPLPQQIMERVYAAERTANEGPMLAMTKRQTVLKVDAAQVLANKQQFD---ETMSWWTATRDNY 331 (537) T ss_pred CCCCchhhhcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcCHHHHH---HHHHHHHhhcCCc Confidence 432 224567999999999999999998888888887776553333222222 344433 3333333333344 Q ss_pred cceeecCC-CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc-ccccHHHHHHHHHHH------HHHHH Q lcl|Aclame:pro 255 HRIALMPV-GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA-TLNNIEQQQQQFYTD------TLQAT 326 (432) Q Consensus 255 g~~~vl~~-g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~-~~~~~~~~~~~~~~~------~l~P~ 326 (432) +++++++ +.+|++++.+...+ .+.+....+.||.+.|||..+|.+.... ..++.+...+.|+.. .+.|. T Consensus 332 -g~~~id~e~e~~e~~~~~lsgl--~~~l~~~~~~iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p~ 408 (537) T protein:vir:10 332 -QVRVVDKDNEDVVQIDTTLNDL--DKVIMNQYQLVCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRPL 408 (537) T ss_pred -ceeEecCCCceeEEEeccCCCH--HHHHHHHHHHHHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHHH Confidence 4556565 68999888777665 4778888899999999999987654332 223344444444432 47888 Q ss_pred HHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHH-------HHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Q lcl|Aclame:pro 327 LTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLL 399 (432) Q Consensus 327 ~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~ 399 (432) ++.+.+.+-+..+... ..+.|.+++|..+|.+++++ ++.+++++|++++||+|+.|+.+|..+.+.+. T Consensus 409 l~~l~~ll~~~~~~~~-----~~~~i~f~pL~~~s~kEkAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~g~~~l~ 483 (537) T protein:vir:10 409 IDRHHQLVCRSHLRKR-----IRVKVEFPPMDAPKESERADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTLGFTSIT 483 (537) T ss_pred HHHHHHHHHHhcCCCC-----cceEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCcccccccc Confidence 8888877766555432 23555668998888888776 47889999999999999999887754433331 Q ss_pred eccccccccc------------cccccCCCCCCCCCCC----------CCCCCC Q lcl|Aclame:pro 400 VNGNMLPIDM------------AGQAYLKGGDTNGEVS----------KEGNEG 431 (432) Q Consensus 400 ~~~n~~~~~~------------~~~~~~~gg~~~~~~~----------~~~~e~ 431 (432) ...+....+. .+.+..+++....+.+ +..+++ T Consensus 484 ~~~~~ed~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 537 (537) T protein:vir:10 484 PAMRPTDAEDIDVDDEGKPVRIIEDQPAPSEMFGATSSGESANDPRDSGAAFED 537 (537) T ss_pred CCCChhhhhcccCCccCCcCCCCCCCCCccccCCCCccccccCCCccCccccCC Confidence 1111100000 0000000000000011 111111 No 108 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.91 E-value=1.1e-24 Score=151.85 Aligned_cols=414 Identities=11% Similarity=0.090 Sum_probs=226.2 Q ss_pred CchHHHHHHh------------ccccccc-cccccccCCchH-------------HHHHhhcCCcCccccc-HHHHhccH Q lcl|Aclame:pro 1 MKIVDSVKKF------------FNFEKRQ-TSQVIELNKDDE-------------KLLEWLGISPSTISVK-GKNALKVA 53 (432) Q Consensus 1 Mg~~~~l~~~------------~~~~~~~-~~~~~~~~~~~~-------------~~~~~~g~~~~~~~v~-~~~a~~~~ 53 (432) .+--.|.++. +...... ...........- ....|... ....... ...+.+++ T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~-~~~~~~~l~a~Y~~~~ 95 (532) T protein:vir:94 17 LQQAQRVDAKRATHTSLGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEA-TSWPGFPTLALLAQLP 95 (532) T ss_pred hhhHhhhhhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCcccccccccccccc-cccchHHHHHHHHcCc Confidence 1111111110 0000000 000000000000 00011110 0111111 22344789 Q ss_pred HHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC------ Q lcl|Aclame:pro 54 TVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD------ 127 (432) Q Consensus 54 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~------ 127 (432) .++.+|+.+|+.+-+-.+.+...+++.... .....|...-... ...+-+...+.+..++|.+++++... T Consensus 96 l~r~~Vd~~aed~~r~~~~i~~~~~~~~~~----~~~~~i~~~~~~l-~v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~ 170 (532) T protein:vir:94 96 EYRTMHETPADECVRAWGKITCSSKDELAA----DKATRITQKLEQY-NVRTLVRTVVIHDQAYGGAHVFPHLKMDGDSV 170 (532) T ss_pred hhhhhhccchHHHhhCCceEeeCCccccch----HHHHHHHHHHHhh-hHHHHHHHHHHhhhcccceEEEEEeccCCccc Confidence 999999999999999999997654433221 1222222222222 22344555666667899999876432 Q ss_pred -------------CCCceEEEEEEcCcceEEEEcC--cc--ceeccceeEEEecccCceEEEccceEEEEecCC------ Q lcl|Aclame:pro 128 -------------RKGKVQALWPIDASKVTVYIDD--VG--LLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI------ 184 (432) Q Consensus 128 -------------~~g~~~~l~~~~~~~v~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------ 184 (432) ..|.+.+|.+++|..|++.... +. ..++....| . ...| +.+.++.||||.... T Consensus 171 ~~~~p~~l~~~~I~~g~~~~l~vld~~~v~p~~~~~~dp~sp~fg~P~~y-~-v~~g--~~iH~SRli~f~g~~~p~~~~ 246 (532) T protein:vir:94 171 PADAPLLLSPSFVQRGCLIGFATIEPMWLSPNAYNATDPTLPSFYKPDSW-I-ATSG--KKIHSSRIHTVVGRPVGDMLK 246 (532) T ss_pred cccccccccccccccceeeEEEeechheecccccccccccccccCCceeE-E-EccC--eeeccceEEEecCCCchhhhc Confidence 2344578999999998865321 11 112222222 2 2223 468999999997432 Q ss_pred CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-CC Q lcl|Aclame:pro 185 TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VG 263 (432) Q Consensus 185 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-~g 263 (432) +...++|.|.++.+...+............+..........+.....++.+..+++.+++.....+.+| .++++++ ++ T Consensus 247 ~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n-~g~~~id~~~ 325 (532) T protein:vir:94 247 AAYSFRGVSISQLAMPYVDNWLRTRQSVSDTVKQFSMTNLATDMAQLLAPGGAQSLDARLQLFNLYRDN-RNIGALDKGT 325 (532) T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcchhHHHHHHHHHHHHhhcCC-ccceEEcCCC Confidence 223457999999999999999998888888776655443222222334555667777777655444334 3455665 45 Q ss_pred ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc-ccHHHHHHHHHH-------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 264 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIEQQQQQFYT-------DTLQATLTMYEQEMT 335 (432) Q Consensus 264 ~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~~~-------~~l~P~~~~i~~~l~ 335 (432) .+|++++.+..+. .+........||.+.+||..+|.+...... ++.+.....|+. ..+.|+++.+.+.|. T Consensus 326 e~~e~~~~~lsgl--~~~l~~~~~~iAaa~~IP~t~LfG~sp~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~ 403 (532) T protein:vir:94 326 EEIQQTNTPLSGL--DSLQAQSQEQMAAVSHIPLVKLLGITPNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQ 403 (532) T ss_pred ceeEEEecccCCH--HHHHHHHHHHHHhHhCCCeeeeecCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7899888777765 477888899999999999998866544333 333434444444 347788888877776 Q ss_pred HhhccchhhcchhhhhhhhhhhhhhhHHHHHH-------HHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccc-cc Q lcl|Aclame:pro 336 YKLFLDSELDKGFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNML-PI 407 (432) Q Consensus 336 ~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~-~~ 407 (432) +..+... ..+++ |.+++|..++.+++++ ++.+++++|++++||+|++++..|..+.+......... .. T Consensus 404 ~s~~g~~--~~d~~--~~f~pL~~~s~kEkAei~~~~a~a~~~~~~~Gvi~~~Evr~~l~~~~~~~~~~~~~~~~~~~~~ 479 (532) T protein:vir:94 404 LSEYGQI--DPGLA--WEWSPLMELDDKELAEVRQLNASTDSTLMELGVIDAKMVQQRLAADPTSGYAGALGERDELDDV 479 (532) T ss_pred HHhcCCC--CCCce--EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcCCccccccccccccccccc Confidence 5544332 23444 4557787777776655 45778999999999999999999876544332111100 00 Q ss_pred c------ccc-cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 408 D------MAG-QAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 408 ~------~~~-~~~~~gg~~~~~~~~~~~e~~ 432 (432) + ... ...+++++...++ ....++| T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d 510 (532) T protein:vir:94 480 EEIAKQLMAAALNPPATAPQTPNP-QPDSEDD 510 (532) T ss_pred cchhhhhcccccCCCCCCCCCCCC-CCCCCCC Confidence 0 000 0111111111111 1111111 No 109 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.89 E-value=2.5e-24 Score=149.99 Aligned_cols=385 Identities=11% Similarity=0.097 Sum_probs=210.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc----Cccccc----HHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP----STISVK----GKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~v~----~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) ||+|-+ +++............+..-.|... .....+ ...+.+++.++.+|+.+|+..-+..+. T Consensus 1 ~~~~m~---------~~~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~ 71 (435) T protein:vir:79 1 MGVFMS---------DKVKAITKEDGYNEIFGSKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFK 71 (435) T ss_pred CCcccc---------cccccchhhcchhhhhcccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCce Confidence 999832 111111111111111111112111 111111 123357889999999999999999998 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee-C---------CCCceEEEEEEcCcc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-D---------RKGKVQALWPIDASK 142 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~-~---------~~g~~~~l~~~~~~~ 142 (432) +...+++. .+...+. + . ...+-+...+.+..++|.+++++.. + ..|.+..+.++++.. T Consensus 72 i~g~~~~~-------~~~~~~~-~---l-~~~~~l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~ 139 (435) T protein:vir:79 72 VDGVKNEK-------SFKSRWD-E---L-RLNAKIIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQ 139 (435) T ss_pred ecCCChHH-------HHHHHHH-H---h-hHHHHHHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhh Confidence 75322110 1111111 1 1 2234556666677789998887753 2 235666888999988 Q ss_pred eEEEEcC---ccceeccceeEEEecccC--ceEEEccceEEEEec------CCCCCcccccCHH-HHHHHHHHHHHHHHH Q lcl|Aclame:pro 143 VTVYIDD---VGLLNSKTKMWYVVNTGG--QQRVLKPEEILHFKN------GITLDGLVGVPTM-EYLKSTLENSASADK 210 (432) Q Consensus 143 v~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~vih~~~------~~~~~~~~G~s~~-~~~~~~~~~~~~~~~ 210 (432) |++.... ....++... +|.....+ ..+.+.++.||||.. ..+....+|.|++ +.+...+........ T Consensus 140 i~~~~~~~dp~sp~fg~P~-~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~ 218 (435) T protein:vir:79 140 ITIHERETNARSVRYGEPK-LYKISPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQE 218 (435) T ss_pred ccchhhccCCcccccCcce-EEEEecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHH Confidence 8654321 111122233 33333222 356799999999963 2344567899997 578888888888888 Q ss_pred HHHHHHhccCCcceEEEeCC---CC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHH Q lcl|Aclame:pro 211 FINNFYKQGLQVKGLVQYVG---DL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTI 286 (432) Q Consensus 211 ~~~~~~~n~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~ 286 (432) ....++...... ++++++ .. +++....++.++........+.+.+++..++.+|++++.+.++. .+...... T Consensus 219 ~~~~l~~~~~~~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsgl--~~~~~~~~ 294 (435) T protein:vir:79 219 LATQLLRRKQQA--VWKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSGV--PEFLQEKI 294 (435) T ss_pred HHHHHHHHhcCc--cccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCCH--HHHHHHHH Confidence 888876655433 233322 11 22233334444443333323445566666677899888877765 47888999 Q ss_pred HHHHHHhcCChhhccCcccccc-ccHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhh Q lcl|Aclame:pro 287 RQIATAFGIKMHQLNDLSKATL-NNIEQQQQQFYTD-------TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL 358 (432) Q Consensus 287 ~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~~~~-------~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~ 358 (432) ..||.+.+||..+|.+...+.. ++.+.....|+.. .+.|.++.+-+.+ .. ..+++++ +++|. T Consensus 295 ~~iaaa~~IP~t~L~G~s~~glnstgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~li----~~----s~d~~~~--f~pL~ 364 (435) T protein:vir:79 295 DRIVALTGIHEIIIKNKNTGGVSASQNTALETFYKLIDRKRVEDYKPILEFLLPFM----IS----ETEWSIE--FEPLS 364 (435) T ss_pred HHHHhhhCCCeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hc----CCCCeEE--eCCCC Confidence 9999999999999876555543 3344444444443 2444444333322 21 2344444 57888 Q ss_pred hhhHHHHHH-------HHHHHHhCCCcCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 359 RADIKTRYE-------AYRTGIQGGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 359 ~~d~~~~~~-------~~~~~~~~g~~t~nE~R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) .++.+++++ ++.+++++|+++++|+|+.+ ...+..+... .....++++ .+.+.+..+|++| T Consensus 365 ~~sekEkAei~~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~~~~----~~~~~~~~~-------~d~~~~~~~e~g~ 433 (435) T protein:vir:79 365 VPSDKDKAEIMAKNVESVVKLKAEQAINLKETRDTLRSICPDLKIMD----NDNIELPEP-------EDLDPEPGQEGGL 433 (435) T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCCC----cccccCCcc-------ccCCCCCCCCCCC Confidence 888765554 56677889999999999987 3222211000 000011111 1111122222222 Q ss_pred CC Q lcl|Aclame:pro 431 GN 432 (432) Q Consensus 431 ~~ 432 (432) +- T Consensus 434 ~~ 435 (435) T protein:vir:79 434 NK 435 (435) T ss_pred CC Confidence 22 No 110 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.89 E-value=7.2e-23 Score=141.98 Aligned_cols=407 Identities=11% Similarity=0.055 Sum_probs=218.0 Q ss_pred CchHH-------------------------------HHHHhccccccccccccccCCchHHHHHhhcCCc-CcccccHHH Q lcl|Aclame:pro 1 MKIVD-------------------------------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-STISVKGKN 48 (432) Q Consensus 1 Mg~~~-------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~v~~~~ 48 (432) |.+.+ .|.+.............. ........|+.... ....+ ... T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~Dgl~n~~~~lG~~~~~s~y--~~~~~~~~~~~~~~f~gyql-~al 142 (862) T protein:vir:99 66 VEISDSVNAKSVSGKNFAMDSAVRSAIKAITGFAMDDGGGAPVPIGAEGKQSSY--AVPEALQDWYLSQGFIGHQA-CAL 142 (862) T ss_pred ccccccccchhhhhhhhcchhhcchhhhhhhhhhhhcchhhhhhcccccccccc--ccchhccccccccCcccHHH-HHH Confidence 22111 111111111000000000 00001112221111 01111 233 Q ss_pred HhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC- Q lcl|Aclame:pro 49 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD- 127 (432) Q Consensus 49 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~- 127 (432) +.+++.++.+|+.+|+++.+-.+.+...+++.... ......|...-... ...+-+...+.+.-++|.+++++... T Consensus 143 Y~~~~larkiVd~pAeDatR~g~~I~~~~d~~e~~---~e~~~~ie~~~~rL-~v~~~l~eair~~RLyGga~ililv~~ 218 (862) T protein:vir:99 143 IAQHWLVDKACSLAGEDAIRNGWHLKSLGEGEEID---EESLEKFKAIDVEF-KVKENLIEFNRFKNVFGIRVAIFVVDS 218 (862) T ss_pred HHhCchhhhhhhhhhHHHhhCCceEeecCcccccC---HHHHHHHHHHHHHh-hHHHHHHHHHHhcccccceEEEEEecC Confidence 45789999999999999999999998644321110 11112222222222 12344445555566788877765421 Q ss_pred C---------------CCceEEEEEEcCcceEEEE----cCc--cceeccceeEEEecccCceEEEccceEEEEecCC-- Q lcl|Aclame:pro 128 R---------------KGKVQALWPIDASKVTVYI----DDV--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI-- 184 (432) Q Consensus 128 ~---------------~g~~~~l~~~~~~~v~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-- 184 (432) . .|.+..|.+++|.++.+.. ..+ ...++... +| ...| ..|.++.||||.... T Consensus 219 ~D~~~LsqPLn~e~I~kG~lkgl~vlDp~w~~p~~v~~~~~Dp~sp~yGkP~-~y--~I~g--~~IH~SRliif~g~~vp 293 (862) T protein:vir:99 219 EDPDYYEKPFNPDGITPGSYRGISQIDPYWMMPMLTAESTADPSSQFFYEPE-FW--IISG--QKYHRSHLIIARGPQPA 293 (862) T ss_pred cCchhhhcCcCcccccccceeEEEEechhhhcccccccccccccccccCCce-ee--eecC--eeeccceeEEecCCCch Confidence 1 2355788889988877532 112 11122222 22 2333 368899999996433 Q ss_pred ----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhccccccccee Q lcl|Aclame:pro 185 ----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIA 258 (432) Q Consensus 185 ----~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~n~g~~~ 258 (432) +...+.|.|.++.+...+............++.+.... +++++. .+..+ +.+.+++.....+.+| .+++ T Consensus 294 d~lk~ay~f~G~SvLe~iyd~L~~~d~t~~saa~Ll~ka~l~--v~ktd~l~~l~~e--d~l~~r~~~~~~~rdN-~Gi~ 368 (862) T protein:vir:99 294 DILKPTYIFGGIPLVQRIYERVYAAERTANEAPLLAMNKRTT--AIHTDTAKAIANE--DKFIQRLMFWVRYRDN-HAVK 368 (862) T ss_pred hhhhccCCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--eeechhHhhhccH--HHHHHHHHHHHhccCc-ceeE Confidence 23445799999999999999999999999988876544 333332 22222 2344444433333333 4578 Q ss_pred ecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc-ccccccHHHHHHHHHH-------HHHHHHHHHH Q lcl|Aclame:pro 259 LMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQQQQFYT-------DTLQATLTMY 330 (432) Q Consensus 259 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~-~~~~~~~~~~~~~~~~-------~~l~P~~~~i 330 (432) +++.+.+|++++.+..++. +.+......||.+.+||..+|.+.. .+..++.+...+.|+. .-+.|+++.+ T Consensus 369 liD~eEe~e~ls~slSGL~--dll~~~~q~IAaas~IP~tiLfGqspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL 446 (862) T protein:vir:99 369 VLGTDETMEQFDTSLADFD--AVIMGQYQLVASIAKTPATKLLGTAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRH 446 (862) T ss_pred EecCCCceeEEecccCChH--HHHHHHHHHHHhhhCCCceeecccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 8899999999988877664 6788888899999999999876654 3344555555555554 4577888888 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHH-------HHHHHhCCCcCHHHHHHHh------CCCCCCCcce Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEA-------YRTGIQGGFLKPNEARSKE------DLPPEAGGDR 397 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~-------~~~~~~~g~~t~nE~R~~~------gl~p~~~gd~ 397 (432) ...+...+ . ...++. |.+++|..++.+++++. +.+++++|+++++|+|++| |++.++..|. T Consensus 447 ~~li~~~l-g---~~~d~~--ieFnpL~~~sekEkAEi~kk~Aea~~~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~ 520 (862) T protein:vir:99 447 YLISRLSL-G---IQHEID--VVMEPVASMTAQQQADLNKTKAEGGKVLIDGGVISPDEERNRIRDDKRSGYNRLTKEDA 520 (862) T ss_pred HHHHHHhc-C---CCCcce--EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccc Confidence 76654332 2 123344 44578988888877755 6788999999999999976 4444432221 Q ss_pred e----eeccccccccccccccCC--CCCCCCCCC---CCCCCCC Q lcl|Aclame:pro 398 L----LVNGNMLPIDMAGQAYLK--GGDTNGEVS---KEGNEGN 432 (432) Q Consensus 398 ~----~~~~n~~~~~~~~~~~~~--gg~~~~~~~---~~~~e~~ 432 (432) - ..+.+.......+..... ..+..+... .+++++. T Consensus 521 E~d~~~~~e~~~~~e~~g~a~~~ap~de~~aga~~~~~e~d~~~ 564 (862) T protein:vir:99 521 EETPGASPENLAAYQKAGAAQETASAKETQAGAAVTTAEGDQPN 564 (862) T ss_pred cccCCCCcccccccccCCcccccccccccccccCCccccCCccc Confidence 1 111222111111111000 000000000 0111110 No 111 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.87 E-value=4.2e-23 Score=143.24 Aligned_cols=380 Identities=14% Similarity=0.136 Sum_probs=213.2 Q ss_pred CchHH--HHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecC Q lcl|Aclame:pro 1 MKIVD--SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) Q Consensus 1 Mg~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 78 (432) |.+|. .+.++++.......... . .+.....+ ...+.+++.++.+|+.+|+.+.+..+.+...++ T Consensus 1 ~~~~~~d~~~~~~~~~~~~~~~~~--~-----------~~~~~~~l-~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~ 66 (427) T protein:vir:10 1 MKIVKHDGYNDIFNGGADGSPKPF--F-----------MSDASYHV-GSFYNDNATAKRIVDVIPEEMVTAGFKMSGVKD 66 (427) T ss_pred CCccccchHHHHhhcCCCCcccCc--c-----------ccCchHHH-HHHHHcCchhhhhhccchHHhhcCCccccCccH Confidence 77663 34444432211110000 0 01111111 233457889999999999999999999854221 Q ss_pred CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee----------CCCCceEEEEEEcCcceEEEEc Q lcl|Aclame:pro 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF----------DRKGKVQALWPIDASKVTVYID 148 (432) Q Consensus 79 ~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~----------~~~g~~~~l~~~~~~~v~~~~~ 148 (432) +. .. ...+..| ...+-+...+.+..++|.+++++.- ...|.+..|.++++..|++... T Consensus 67 ~~---~~-~~~~~~l--------~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~ 134 (427) T protein:vir:10 67 EK---EF-KSLWDSY--------KLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKR 134 (427) T ss_pred HH---HH-HHHHHHh--------hHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhccccccc Confidence 11 00 1111222 2234566667777889999998642 3357788999999988876432 Q ss_pred Cc---cceeccceeEEEecccC--ceEEEccceEEEEecC------CCCCcccccCHHH-HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 149 DV---GLLNSKTKMWYVVNTGG--QQRVLKPEEILHFKNG------ITLDGLVGVPTME-YLKSTLENSASADKFINNFY 216 (432) Q Consensus 149 ~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~vih~~~~------~~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~~ 216 (432) .. ...++... +|....++ ..+.+.++.|||+... .+....+|.|++. .+...+............++ T Consensus 135 ~~dp~s~~fg~P~-~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~ 213 (427) T protein:vir:10 135 VTNARSPRYGEPE-IYKVSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQIL 213 (427) T ss_pred ccCccccccCcce-EEEEecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHH Confidence 21 11122222 23333322 3367999999999633 2345678999985 57787888888888888777 Q ss_pred hccCCcceEEEeCCC---C-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 217 KQGLQVKGLVQYVGD---L-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 217 ~n~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) ...... ++++++- + +.+....+++++........+.+.+++...+.+|++++.+.+.. .+........||.+ T Consensus 214 ~k~~~~--v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa 289 (427) T protein:vir:10 214 RRKQQA--VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISGV--PEFLSSKMDRIVSL 289 (427) T ss_pred HHhccc--cccchhHHHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCCh--HHHHHHHHHHHHhh Confidence 665433 3333321 1 12222233444444333333456677777778999988877765 47788999999999 Q ss_pred hcCChhhccCcccccc-ccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLSKATL-NNIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKT 364 (432) Q Consensus 293 ~gvp~~~l~~~~~~~~-~~~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~ 364 (432) .+||..+|.+...... ++.+...+.|+. ..+.|.++.+-+.+ . ...+++++| ++|..++.++ T Consensus 290 ~~IP~t~L~G~sp~Glnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i----~----~s~~~~~~f--~pL~~~s~kE 359 (427) T protein:vir:10 290 SGIHEIIIKNKNVGGVSASQNTALETFYKLVDRKREEDYRPLLEFLLPFI----V----DEEEWSIEF--EPLSVPSKKE 359 (427) T ss_pred hCCCeeeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h----cCCCcEEEe--CCCCCCCHHH Confidence 9999999876655544 333444444444 33555554443332 1 123455555 6777777666 Q ss_pred HH-------HHHHHHHhCCCcCHHHHHHHh----CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 365 RY-------EAYRTGIQGGFLKPNEARSKE----DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 365 ~~-------~~~~~~~~~g~~t~nE~R~~~----gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) ++ +++.+++++|+++++|+|+.+ +...+.+++.. .....+...+.++. .++.+.+|| T Consensus 360 kaei~~~~a~a~~~~~~~gvi~~~e~r~~L~~~~~~~~~~~~~~~----~~e~~~~~~e~~p~------~~e~~~d~~ 427 (427) T protein:vir:10 360 ESEITKNNVESVTKAITEQIIDLEEARDTLRSIAPEFKLKDGNNI----NIREPEETTEPEPG------LGEKLEDEN 427 (427) T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhhccccCCCCccc----cccccchhcCCCCC------CCCCCCCCC Confidence 54 466778999999999999877 33333332211 11111111111111 111111222 No 112 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.87 E-value=7.2e-22 Score=136.48 Aligned_cols=408 Identities=11% Similarity=0.093 Sum_probs=219.4 Q ss_pred CchHHHHHHhcccccccc------ccc-------ccc---CCchHHHHHhhc-CCcCccc--------------c-cHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQT------SQV-------IEL---NKDDEKLLEWLG-ISPSTIS--------------V-KGKN 48 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~------~~~-------~~~---~~~~~~~~~~~g-~~~~~~~--------------v-~~~~ 48 (432) |.=+.+++.+.....+.. ... .+. ..+.+.+....+ ...+... . .... T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyql~al 116 (765) T protein:vir:96 37 MIKLGKIRGWNVEPEKAPVIRSVKDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQACAI 116 (765) T ss_pred chhHHHHhhcccccccCCCCCCCCcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHHHHHH Confidence 444444333322111110 000 000 111111211111 1110000 0 1123 Q ss_pred HhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC- Q lcl|Aclame:pro 49 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD- 127 (432) Q Consensus 49 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~- 127 (432) +.+++.++.+|+.+|++.-+-.+.+...+++. . ......|...-... ...+-+...+.+.-++|.+|+++... T Consensus 117 Y~~~~l~rkiVd~pAeDa~R~g~~I~~~~~e~-~----~~~~~~l~~~~~rl-~v~~~l~ea~~~~RlyGga~i~i~i~~ 190 (765) T protein:vir:96 117 ISQHWLVDKACSMSGEDAARNGWELKSDGRKL-S----DEQSALIARRDMEF-RVKDNLVELNRFKNVFGVRIALFVVES 190 (765) T ss_pred HHhCchhhhhhhcchHHhhcCCceeecCcccc-C----HHHHHHHHHHHHHh-hHHHHHHHHHHHhhhceeeEEEEEecc Confidence 44789999999999999999998886432211 1 11122222111111 23455666677778899999876432 Q ss_pred ---------------CCCceEEEEEEcCcceEEEEc----Cc--cceeccceeEEEecccCceEEEccceEEEEecCC-- Q lcl|Aclame:pro 128 ---------------RKGKVQALWPIDASKVTVYID----DV--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI-- 184 (432) Q Consensus 128 ---------------~~g~~~~l~~~~~~~v~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-- 184 (432) ..|.+..|.+++|..+..... .+ ...++.. ..| ...+ +.|.++.|||+.... T Consensus 191 ~D~~~l~~PL~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P-~~y--~i~g--~~IH~SRli~~~g~~lp 265 (765) T protein:vir:96 191 DDPDYYEKPFNPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEP-DFW--IISG--KKYHRSHLVVVRGPQPP 265 (765) T ss_pred cCcchhhccccccccccceeeEEEEechhhcccccchhccccccccccCcc-eee--eecC--ceeccceEEEecCCCch Confidence 123556788888877766331 11 1112222 122 2333 357899999996433 Q ss_pred ----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec Q lcl|Aclame:pro 185 ----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM 260 (432) Q Consensus 185 ----~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl 260 (432) +...++|.|.++.++..+............++........-+.....+..+ +.+.+++.......+| .+++++ T Consensus 266 d~lk~~~~~~G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~v~k~~~~~~l~~~--~~l~~r~~~~~~~r~n-~g~~~i 342 (765) T protein:vir:96 266 DILKPTYIFGGIPLTQRIYERVYAAERTANEAPLLAMSKRTSTIHVDVEKAIANE--DAFNARLAFWIANRDN-HGVKVI 342 (765) T ss_pred hhhccccCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccceeeechHhhhccH--HHHHHHHHHHHHhcCC-ceeEEe Confidence 234567999999999999999999988888887766543333222222222 2344444444333333 457888 Q ss_pred CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc-cccccHHHHHHHHHH-------HHHHHHHHHHHH Q lcl|Aclame:pro 261 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATLNNIEQQQQQFYT-------DTLQATLTMYEQ 332 (432) Q Consensus 261 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~-~~~~~~~~~~~~~~~-------~~l~P~~~~i~~ 332 (432) +.+.+|++++.+..++ .+.+......||.+.+||..+|.+... +..++.+...+.|+. ..+.|.++.+-+ T Consensus 343 d~ee~~e~~s~~lsgl--~d~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~ 420 (765) T protein:vir:96 343 GIDETMEQFDTNLSDF--DSVIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYL 420 (765) T ss_pred cCCcceeEEecccCCH--HHHHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999998887765 478888999999999999988876542 233444545555554 345666665555 Q ss_pred HHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHH-------HHHHHHhCCCcCHHHHHHHhCCCCCCCcce-----eee Q lcl|Aclame:pro 333 EMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKEDLPPEAGGDR-----LLV 400 (432) Q Consensus 333 ~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~-----~~~ 400 (432) .|-.. .....+ +.|.+++|..++.+++++ ++.+++++|+++++|+|++++.++.-+.+. ... T Consensus 421 li~~s----~~i~~d--~~i~FnpL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~ 494 (765) T protein:vir:96 421 LLAKS----ESIDVQ--LEIVWNPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAET 494 (765) T ss_pred HHHHh----cCCCCc--ceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCcccccc Confidence 54322 222334 445558888888777665 477889999999999999986655322111 111 Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCC-----------C Q lcl|Aclame:pro 401 NGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG-----------N 432 (432) Q Consensus 401 ~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~-----------~ 432 (432) ...+.|.+. ......++.+.+...+++.+ . T Consensus 495 ~~~~~pe~~--~~~~~~~~~~~~~~~e~~~~~a~p~~~eg~~~ 535 (765) T protein:vir:96 495 EPGMSPENL--AELEKAGAQSAKAKGEAERAEAQAGAVEGAGD 535 (765) T ss_pred ccCCCcccc--ccccCCCcccccccCccccccCCCCccCCCCc Confidence 111111110 00011111111111111100 0 No 113 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.86 E-value=3.7e-22 Score=138.09 Aligned_cols=381 Identities=11% Similarity=0.085 Sum_probs=217.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 80 (432) |--.|.+.+++....- .... ..+.. +.....+ ...+.+++.++.+|+.+|+.+-+-.|.+...++.. T Consensus 1 ~~~~D~~~n~~~gg~~---~~~~--------~~~~~-~~~~~~l-~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~~~~ 67 (422) T protein:vir:10 1 MVKTDSYANIFLGGSD---GSEI--------YGSLQ-NQAPTIL-ASLYADNALVRRIIDTIPETALAAGFHIDGIDDEP 67 (422) T ss_pred CccchhhHHHHcCCCC---Cccc--------cCccc-ccCHHHH-HHHHHhChhhHHHHhhhhHHHhcCCccccCCCHHH Confidence 8888888777642110 0000 00000 0000011 12344789999999999999999999985332111 Q ss_pred ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee-C---------CCCceEEEEEEcCcceEEEEcC- Q lcl|Aclame:pro 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-D---------RKGKVQALWPIDASKVTVYIDD- 149 (432) Q Consensus 81 ~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~-~---------~~g~~~~l~~~~~~~v~~~~~~- 149 (432) .+...+. + ....+-+...+.+..++|.+++++.. + ..|.+..|.++++..|++.... T Consensus 68 -------~~~~~~~-~----l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~ 135 (422) T protein:vir:10 68 -------AFWSRWD-D----LEMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREE 135 (422) T ss_pred -------HHHHHHH-H----hhHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhccc Confidence 1111121 1 12235566666777889999998754 2 2466778999999988764321 Q ss_pred --ccceeccceeEEEeccc--CceEEEccceEEEEecC------CCCCcccccCHHHH-HHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 150 --VGLLNSKTKMWYVVNTG--GQQRVLKPEEILHFKNG------ITLDGLVGVPTMEY-LKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 150 --~~~~~~~~~~~~~~~~~--~~~~~~~~~~vih~~~~------~~~~~~~G~s~~~~-~~~~~~~~~~~~~~~~~~~~n 218 (432) ....++.... |.+..+ +..+.+.++.|||+... .+....+|.|++.. +...+............++.. T Consensus 136 dp~s~~fg~P~~-y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~ 214 (422) T protein:vir:10 136 NPRNARFGEPLT-YRITTNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKR 214 (422) T ss_pred CccccccCcceE-EEEecCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1111222222 233222 23467899999999632 24456789999986 678888888888888887766 Q ss_pred cCCcceEEEeCC---CC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 219 GLQVKGLVQYVG---DL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFG 294 (432) Q Consensus 219 ~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~g 294 (432) .... ++.++. .. +.+....+++++........+.+.+++..++.+|++++.+.++. .+.......+||.+.+ T Consensus 215 ~~~~--v~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~ 290 (422) T protein:vir:10 215 KQQA--VWKAKGLAELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGGI--DAFLDKKFDRIVALSG 290 (422) T ss_pred hccc--cccchhHHHhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCCh--HHHHHHHHHHHHhhhC Confidence 5443 333332 11 23334444455554444334455666667778999988887765 5788999999999999 Q ss_pred CChhhccCcccccc-ccHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHH Q lcl|Aclame:pro 295 IKMHQLNDLSKATL-NNIEQQQQQFYTD-------TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRY 366 (432) Q Consensus 295 vp~~~l~~~~~~~~-~~~~~~~~~~~~~-------~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~ 366 (432) ||..+|.+...... ++.+...+.|+.. -+.|.++.+-+.+ . +..+++++| ++|..++.++++ T Consensus 291 IP~t~L~G~s~~Glnatgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~~i----~----~s~~~~~~f--~pL~~~sekeka 360 (422) T protein:vir:10 291 IHEIILKNKNVGGVSSSQNTALETFHKLVDRKRNAELLPILEFLIPFI----V----NAEEWSVEF--NPLAQESSKDKA 360 (422) T ss_pred CCeeeeccCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----c----ccCCcEEEe--CCCCCCCHHHHH Confidence 99999876655544 3344444444442 3455544443332 1 123455554 677777776554 Q ss_pred -------HHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 367 -------EAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 367 -------~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +++.+++++|+++++|+|+.|.-..... -+..+..+.+.. .....+ .++++.++ | T Consensus 361 ei~~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~----~~~~~~~~~~~~-----~~~~~~-~~~~~~~~-d 422 (422) T protein:vir:10 361 EILEKNVNSIAALIAAGAMDIDEARDTLRTIAPEV----KINDGSVETEVT-----ISETSN-DPLEVPTD-D 422 (422) T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhcccc----cCCCCCCccccc-----hhhcCC-CCCCCCCC-C Confidence 4567789999999999999884332211 011122221110 000011 11111111 1 No 114 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.85 E-value=4.3e-20 Score=126.78 Aligned_cols=413 Identities=12% Similarity=0.031 Sum_probs=236.1 Q ss_pred Cc-hHHHHHHhccccccccccccccCCc------------hH-HHHHhh----cCCcCcccccHHHHh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MK-IVDSVKKFFNFEKRQTSQVIELNKD------------DE-KLLEWL----GISPSTISVKGKNAL-KVATVFACIKI 61 (432) Q Consensus 1 Mg-~~~~l~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~----g~~~~~~~v~~~~a~-~~~~v~~~i~~ 61 (432) |+ |+|...+.+........+....... .+ .+...+ ++......--.+.++ +.+.|.+|+.. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~ 80 (526) T protein:vir:99 1 MAQIVDVYGNPIRTQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 44 2232222111110011111111100 00 111111 110000000122333 58899999999 Q ss_pred HHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C--ceEEEEEE Q lcl|Aclame:pro 62 LSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPI 138 (432) Q Consensus 62 ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~~ 138 (432) +...|.+++|.|....++.... ...+..++..-+....+.+++..++ +.+.+|-++.++++... | .+..+.+. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~---~~~a~~v~~~l~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~r 156 (526) T protein:vir:99 81 RKRAILGLDWAVEPPRNASAAE---KADADYLHELLLDLEGLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHR 156 (526) T ss_pred HHHHHhCCCceEecCCCCCHHH---HHHHHHHHHHHhcccCHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeeee Confidence 9999999999998654433211 1223333322222224566666665 57889999999986543 3 46689999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) ++.++.+..++..... ..........+++...|..++....+..+|.|.+..+.-.+.......++...+.+. T Consensus 157 ~~~~f~~~~~~~~~l~-------~~~~~~~g~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (526) T protein:vir:99 157 PQSWFQLNPEDQNELR-------LRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEI 229 (526) T ss_pred cccceeeccCCCcEEE-------ecCCCCCceeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHH Confidence 9988876544431111 111223335577776555555666678899999999999999999999999999999 Q ss_pred cCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCC-hhHHHHHHHHHHHHHHHHHHh-cCC Q lcl|Aclame:pro 219 GLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAF-GIK 296 (432) Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~I~~~~-gvp 296 (432) .|.|--+.+.+...++++.+.+.+.+.+.-+ + ..++++.|++++-+..+ .....+.++.++..++|+.++ |=. T Consensus 230 yG~P~~igky~~~a~~~ek~~L~~av~~i~~---d--~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~iLGqt 304 (526) T protein:vir:99 230 YGLPIRLGKYPPGTADEEKATLLRAVTGLGH---A--AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAVLGGT 304 (526) T ss_pred cCCceEEEecCCCCCHHHHHHHHHHHHHHhh---C--cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHHhhhh Confidence 9999999999988899999999988877633 2 24666777766655432 222346788888889987764 211 Q ss_pred hhh-ccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhhhhhhHHHHH Q lcl|Aclame:pro 297 MHQ-LNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKTRY 366 (432) Q Consensus 297 ~~~-l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~~~ 366 (432) ... .+.+..++++. .+.........+.-.++.|++.||+.++.+..... ..++.| +.....|+++++ T Consensus 305 lTs~~~~g~~gS~a~-g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~--~~~e~eDl~~~a 381 (526) T protein:vir:99 305 LTSTTSQSGGGAFAL-GQVHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVF--DLREQADITSMA 381 (526) T ss_pred hccccccCcchhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEe--CCCCcccHHHHH Confidence 111 11111122222 22334455666777888888888876643221111 123444 444677889999 Q ss_pred HHHHHHHhCCC-cCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 367 EAYRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 367 ~~~~~~~~~g~-~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +...++++.|+ ++..++|+.+|+|....++.++.+....+..................+...+++. T Consensus 382 ~~~~~L~~~G~~i~~~~i~e~~Gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:99 382 QSIPALVNVGLEIPSAWVYDKLGIPQPAKNEPVLRSAAQPAILSRQHGQRVAALATIVGPRYGDQQA 448 (526) T ss_pred HHHHHHHhCCCccCHHHHHHHhCCCCCCCcccccCCCCCCcccccccccccccccccccccCcchhh Confidence 99999999997 8999999999998766666554433211111110000000000111111111111 No 115 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.84 E-value=5.7e-22 Score=137.07 Aligned_cols=428 Identities=11% Similarity=0.027 Sum_probs=236.6 Q ss_pred CchHHHHHHhcccccccc---ccc----cccCCchHHHHHhhcCCcCcc-c----------ccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQT---SQV----IELNKDDEKLLEWLGISPSTI-S----------VKGKNALKVATVFACIKIL 62 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~g~~~~~~-~----------v~~~~a~~~~~v~~~i~~i 62 (432) |+|+|++..++.+..... +.. ..-... .....|.....+.. . -+...+..+|.+..+|+.+ T Consensus 1 mn~~dr~i~~~sP~~~~~R~~ar~~~~~y~aa~~-~r~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~ 79 (502) T protein:vir:79 1 MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKT-TRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKL 79 (502) T ss_pred CchHhhHHhhcChHHHHHHHhhHHHHhhccccCc-ccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 999999988886543210 000 000000 00111111111000 0 1123344688999999988 Q ss_pred HHhhccC-ceEEE--eecCCcceeec-c---chhHHhhhcc--ccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---- Q lcl|Aclame:pro 63 SESVSKL-PLKIY--QEDEYGIQRGT-K---HYLNNLLRLR--PNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---- 129 (432) Q Consensus 63 a~~ia~~-~~~~~--~~~~~~~~~~~-~---~~~~~lL~~~--pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---- 129 (432) .+.+-.. .+.+. ....+...... . ..++..+..+ ....++.+++...++..++..|++|+.+++... T Consensus 80 ~~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~ 159 (502) T protein:vir:79 80 EERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLT 159 (502) T ss_pred HHhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccC Confidence 8776543 33332 11111110000 0 1122223222 233468888899999999999999999865432 Q ss_pred ---CceEEEEEEcCcceEEEEcCcc-----ce---eccceeEEEec------ccCceEEEccceEEEEecCCCCCccccc Q lcl|Aclame:pro 130 ---GKVQALWPIDASKVTVYIDDVG-----LL---NSKTKMWYVVN------TGGQQRVLKPEEILHFKNGITLDGLVGV 192 (432) Q Consensus 130 ---g~~~~l~~~~~~~v~~~~~~~~-----~~---~~~~~~~~~~~------~~~~~~~~~~~~vih~~~~~~~~~~~G~ 192 (432) +.+..|..++|.++..-.++.. +. ......|+... .......+++++|+|+..+...+...|. T Consensus 160 ~g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGi 239 (502) T protein:vir:79 160 PSAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGT 239 (502) T ss_pred CCcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCC Confidence 2356788899988753222211 11 11222222221 1233467999999999988888899999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee-ecCCCceeeecCC Q lcl|Aclame:pro 193 PTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA-LMPVGYQFQPISL 271 (432) Q Consensus 193 s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~-vl~~g~~~~~~~~ 271 (432) |.+..+...+.-............+-.+...++++.+.+........- ..-...... -..|.++ .|..|.+++..+. T Consensus 240 s~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~-~~~~~~~~~-l~pG~i~~~L~pGe~i~~~~p 317 (502) T protein:vir:79 240 SLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNG-SKENERELT-IQPGIIYDDLKPGEEIGMVKS 317 (502) T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcccccccCC-CCCcccccc-ccCCccccccCCCceeeeeCC Confidence 999999999888888887777777777888888887654221100000 000000000 1235544 5899999998887 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHH-----------HHHHHHHH-HHHHHHHhhc Q lcl|Aclame:pro 272 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD-----------TLQATLTM-YEQEMTYKLF 339 (432) Q Consensus 272 ~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~-----------~l~P~~~~-i~~~l~~~ll 339 (432) +-....+.+..+...+.||+.+|||...|.+.-+.|||+..+....+.+. -++|+-+. ++.++....+ T Consensus 318 ~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i 397 (502) T protein:vir:79 318 DRPNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVI 397 (502) T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 65666788999999999999999999998765556888877755444332 23332222 2222222222 Q ss_pred cchhh-cc--hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce----------eeecccccc Q lcl|Aclame:pro 340 LDSEL-DK--GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR----------LLVNGNMLP 406 (432) Q Consensus 340 ~~~~~-~~--~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~----------~~~~~n~~~ 406 (432) ..+.. .. -..+.|-.-.....|....+++..+++++|+.|.-++-++.|.++.+-.++ +=++....| T Consensus 398 ~~p~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~ 477 (502) T protein:vir:79 398 RLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDP 477 (502) T ss_pred CCCCCCCchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCC Confidence 11100 00 112223334445578999999999999999999999998999998542222 112222222 Q ss_pred ccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 407 IDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 407 ~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) ...+.....++.+.+.++.+...|+ T Consensus 478 ~~~~~~~~~~~~~~e~~~~~~~~e~ 502 (502) T protein:vir:79 478 ASDKGGSSAATKRQEPQHTDDQSEE 502 (502) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC Confidence 1111111111111111111222222 No 116 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.84 E-value=7.4e-20 Score=125.48 Aligned_cols=413 Identities=13% Similarity=0.013 Sum_probs=234.8 Q ss_pred Cc-hHHHHHHhccccccccccccccCCch------------H-HHHHhhcCCcCccc----ccHHHHh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MK-IVDSVKKFFNFEKRQTSQVIELNKDD------------E-KLLEWLGISPSTIS----VKGKNAL-KVATVFACIKI 61 (432) Q Consensus 1 Mg-~~~~l~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~g~~~~~~~----v~~~~a~-~~~~v~~~i~~ 61 (432) |+ |+|..++.+................. + .+...+-....... --.+.+. +.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~ 80 (528) T protein:vir:10 1 MAAIVDIYGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSK 80 (528) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 54 33433332221111111111111100 0 11111100000000 0122333 58899999999 Q ss_pred HHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---CceEEEEEE Q lcl|Aclame:pro 62 LSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKVQALWPI 138 (432) Q Consensus 62 ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---g~~~~l~~~ 138 (432) +...|.+++|.|....++... +......++..-+....+.+++..+ .+.+++|-++.++++... ..+..+.++ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~---~~~~a~~v~~~l~~~~~f~~~i~~~-lda~~~G~s~~Ei~w~~~~g~~~~~~~~~r 156 (528) T protein:vir:10 81 RKRAVLGLDWTIEPPRNASAA---EKADAEYLHELLLDLEGIEDLMLDC-MDGVGHGYSAIELDWSLQGREWLPQAFDHR 156 (528) T ss_pred HHHHHhcCCceEecCCCCCHH---HHHHHHHHHHHHhCCccHHHHHHHH-HhhhhhcceeEEEEEeecCCceeEEEeeee Confidence 999999999999865443221 1123333332222211234444443 446789999999987543 346688899 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) ++.++.+..++...... .........+++...++.++....+..+|.|.+..+.-.+.......++...+.+. T Consensus 157 ~~~~f~~~~~~~~~l~~-------~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (528) T protein:vir:10 157 PQSWFQLNPDDQDELRL-------RDNSIAGEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEI 229 (528) T ss_pred cccceeeccCCCcEEec-------cCCCCCceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHH Confidence 99887765443211110 11112235577777666565666677899999999999999999999999999999 Q ss_pred cCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCCh-hHHHHHHHHHHHHHHHHHHhcCCh Q lcl|Aclame:pro 219 GLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNM-SDAQFLENTELTIRQIATAFGIKM 297 (432) Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~~~~e~~~~~~~~I~~~~gvp~ 297 (432) .|.|--+.+.+...++++.+.+.+.+.+..+. + .++++.|++++-+..+. .-..+.++.++..++|+.+.-= . T Consensus 230 yG~P~~igky~~~a~~~ek~~L~~al~~i~~~---~--~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~iLG-q 303 (528) T protein:vir:10 230 YGLPIRLGKYPPGTPDEEKVTLLRAVTGLGHA---A--AGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAILG-G 303 (528) T ss_pred cCCCeEEEecCCCCCHHHHHHHHHHHHHHhhC---c--EEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHHhh-h Confidence 99999999999888999999999888776432 2 46667777666654321 2234677888888888776411 1 Q ss_pred hhcc-CccccccccH-HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc-------hhhhhhhhhhhhhhhHHHHHHH Q lcl|Aclame:pro 298 HQLN-DLSKATLNNI-EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK-------GFYSKFNVDAILRADIKTRYEA 368 (432) Q Consensus 298 ~~l~-~~~~~~~~~~-~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~-------~~~~~fd~~~l~~~d~~~~~~~ 368 (432) .+-. ..++.++++. .+-........+.-.++.|+..||+.++.+..... ..+.+|-++.-...|++++++. T Consensus 304 tlTs~~~~g~~gS~Alg~vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~ 383 (528) T protein:vir:10 304 TLTSQTSESGGGAYALGQVHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLKDRADLAAMATS 383 (528) T ss_pred hhhccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCCcccHHHHHHH Confidence 1111 1111112221 22334556667777888888888877633221110 1122333344567788899999 Q ss_pred HHHHHhCCC-cCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCC--CCCCCCC-CCC Q lcl|Aclame:pro 369 YRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNG--EVSKEGN-EGN 432 (432) Q Consensus 369 ~~~~~~~g~-~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~--~~~~~~~-e~~ 432 (432) ..+++..|+ ++..++|+.+|+|....++.+..+....+....+ ...+..... +...+.. +.+ T Consensus 384 ~~~L~~~G~~i~~~~i~e~~gip~p~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 449 (528) T protein:vir:10 384 LPPLVKLGVQVPVNWVQEQLGIPLPANGEAVLGDQAGAGIAQLS--RRPGPRIAALAQVIGPRYRDQE 449 (528) T ss_pred HHHHHhCCCCCCHHHHHHHhCCCCCCCCcccccCCCcccccccC--cccccccccccccccccccccc Confidence 999999998 8999999999998776666665443332221111 111111111 1111111 111 No 117 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.83 E-value=1.6e-19 Score=123.62 Aligned_cols=415 Identities=12% Similarity=0.027 Sum_probs=236.3 Q ss_pred Cc-hHHHHHHhccccccccccccccC------------CchH-HHHHhh----cCCcCcccccHHHHh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MK-IVDSVKKFFNFEKRQTSQVIELN------------KDDE-KLLEWL----GISPSTISVKGKNAL-KVATVFACIKI 61 (432) Q Consensus 1 Mg-~~~~l~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~----g~~~~~~~v~~~~a~-~~~~v~~~i~~ 61 (432) |+ |+|...+.+....-...++.... .-.+ .+...+ ++......--.+.++ +.+.|.+|+.. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~edm~e~D~~i~s~l~~ 80 (526) T protein:vir:79 1 MAQIVDVYGNPIRPQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeeCCCCCccCccccchhhhhhhhhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 43 33332222211100001111000 0000 111111 111000000123333 58899999999 Q ss_pred HHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C--ceEEEEEE Q lcl|Aclame:pro 62 LSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPI 138 (432) Q Consensus 62 ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~~ 138 (432) +...|.+++|.|....++.... ...+..+...-+....+.+++..++. .+.+|-++.++++... | .+..+.+. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~---~~~a~~v~~~l~~~~~~~~~i~~~ld-A~~~G~s~~Ei~w~~~~g~~~~~~l~~r 156 (526) T protein:vir:79 81 RKRAILGLDWAVEPPRNASAAE---KADADYLHELLLDLEGLEDLLLDALD-GIGHGYSCIELEWALQGREWMPLAFHHR 156 (526) T ss_pred HHHHHhCCCceEecCCCCChHH---HHHHHHHHHHHhcccCHHHHHHHHHh-hhhhcceeEEEEEeecCCceeEEEeeee Confidence 9999999999998654433211 12233333222222235566665555 7789999999987554 3 46689999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) ++.++.+..++..... ..........+++...|+.++....+..+|.+.+..+.-.+.......++...+.+. T Consensus 157 ~~~~F~~~~~~~~~l~-------~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~ 229 (526) T protein:vir:79 157 PQSWFQLNPEDQNELR-------LRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEI 229 (526) T ss_pred cccceEeccCCCcEEE-------ecCCCCCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHH Confidence 9988876544431111 111222335677776666665666678899999999999999999999999999999 Q ss_pred cCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCC-hhHHHHHHHHHHHHHHHHHHh-cCC Q lcl|Aclame:pro 219 GLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAF-GIK 296 (432) Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~I~~~~-gvp 296 (432) .|.|--+.+.+...++++.+++.+.+.+.-+ + ..++++.|++++-+..+ .....|.++.++..++|+.+. |=. T Consensus 230 yG~P~~igky~~~a~~~ek~~L~~av~~i~~---d--a~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~iLGqt 304 (526) T protein:vir:79 230 YGLPIRLGKYPPGTADEEKATLLRAVTGLGH---A--AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAVLGGT 304 (526) T ss_pred cCCceEEEecCCCCCHHHHHHHHHHHHHHhc---C--cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHHhhhh Confidence 9999999999988899999999988888743 2 34667777766665432 222347788889999987763 211 Q ss_pred hhh-ccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcch-------hhhhhhhhhhhhhhHHHHHHH Q lcl|Aclame:pro 297 MHQ-LNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG-------FYSKFNVDAILRADIKTRYEA 368 (432) Q Consensus 297 ~~~-l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~-------~~~~fd~~~l~~~d~~~~~~~ 368 (432) ... .+.+..++++. .+.........+.-.++.|++.||+.++.+...... .+.+|-++.....|++++++. T Consensus 305 lTs~~~~g~~gS~a~-g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~ 383 (526) T protein:vir:79 305 LTSTTSQSGGGAFAL-GQVHNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQS 383 (526) T ss_pred hccccccCcchhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHH Confidence 111 11111122322 233345566677788888888888876433221110 122233344567888999999 Q ss_pred HHHHHhCCC-cCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 369 YRTGIQGGF-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 369 ~~~~~~~g~-~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ..+++..|+ ++..++|+.+|+|....++.++.|.......................+...+.+. T Consensus 384 ~~~L~~~G~~i~~~~i~e~~gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:79 384 IPALVNVGLEIPSAWVYDKLGIPQPAKNEPVLRPAAQPAILSRQHGQRVAALATIVGPRYGDQQA 448 (526) T ss_pred HHHHHhCCCcCCHHHHHHHhCCCCCCCchhhccccCCccccccccccccccccccccccCchhhH Confidence 999999997 7889999999997665555554332211000000000000000001111111111 No 118 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.81 E-value=1.6e-20 Score=129.12 Aligned_cols=392 Identities=16% Similarity=0.152 Sum_probs=215.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCC-----------cCcccccH----HHHhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS-----------PSTISVKG----KNALKVATVFACIKILSES 65 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----------~~~~~v~~----~~a~~~~~v~~~i~~ia~~ 65 (432) |+=.+-=+.. + ....+.....+...+|.. .....++. ..+.+++.++.+|+.+|+. T Consensus 1 ~~~~~~a~~~-----~----~~~~a~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~l~~lY~~~~l~r~iVd~~a~d 71 (461) T protein:vir:80 1 MYSIDKAKQA-----K----IDSKIVNRNDFMVGHGKANSRDKLTRQTPGNGQKLDLKACENLYASNSIAMNIVDIISED 71 (461) T ss_pred Cccchhhhhh-----h----hhhhhhhhhHHHhhcCCcchhhhhhccccCcccccCHHHHHHHHHhCCccchhhccchHH Confidence 5533311000 0 000000011111111100 01111222 2334678899999999999 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC-CC------------Cce Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RK------------GKV 132 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~-~~------------g~~ 132 (432) +-+-++.+...+++ ....|...-+.. ...+-+...+.+..++|.+++++... .. +.+ T Consensus 72 ~~r~g~~i~~~~~~---------~~~~~~~~~~~l-~~~~~l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~ 141 (461) T protein:vir:80 72 MVRAGWSLKTDNKE---------MKKNIESKWRKL-KTKDRFQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTI 141 (461) T ss_pred hhcCCeeeecCCHH---------HHHHHHHHHHHh-hHHHHHHHHHHhhcccccEEEEEEeecCCccccCccCCcccccc Confidence 99988887533211 111121111111 22345666677788999999987432 11 122 Q ss_pred EEEEEEcC---cceEE---EEcCccceeccceeEEEec-------------ccCceEEEccceEEEEecCCCCCcccccC Q lcl|Aclame:pro 133 QALWPIDA---SKVTV---YIDDVGLLNSKTKMWYVVN-------------TGGQQRVLKPEEILHFKNGITLDGLVGVP 193 (432) Q Consensus 133 ~~l~~~~~---~~v~~---~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~vih~~~~~~~~~~~G~s 193 (432) ..+..+.| ..+.. ..+.....++.... |.+. .++..+.+.++.|||+.+....+..+|.| T Consensus 142 ~~~~~l~~~~~~~i~~~~~~~dp~sp~fg~P~~-y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S 220 (461) T protein:vir:80 142 KSIPYINTFNTQKVTQLYLNQDMFSEHFGEVEF-FEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRS 220 (461) T ss_pred cceeEEEeccccccchhhhcccCcCcccccceE-EEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcc Confidence 23333333 22211 11111111222222 2221 23344779999999999777778889999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC--CCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCC Q lcl|Aclame:pro 194 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL 271 (432) Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~ 271 (432) .++.+...+............++.+.... +++++. .+..+....+.+.+.... +..++++++++-++++++. T Consensus 221 ~le~~~~~l~~~~~~~~~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~~----~~~g~~~~d~~e~~e~~~~ 294 (461) T protein:vir:80 221 IFESLYDIITVMDTSLWSVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFMF----RTEALAIIKGDEQLTKEST 294 (461) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHhc----CCceEEEEcCCcceEEEec Confidence 99999999999999999888887776544 444442 223344444555555432 2345778888999999988 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccchhh Q lcl|Aclame:pro 272 NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD-------TLQATLTMYEQEMTYKLFLDSEL 344 (432) Q Consensus 272 ~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~-------~l~P~~~~i~~~l~~~ll~~~~~ 344 (432) +..+.. +..+.....||.+.+||..+|.+...+..++.++..+.|+.. -+.|+++.+.+.+-+..+..... T Consensus 295 ~lsgl~--~~l~~~~~~iaa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~ 372 (461) T protein:vir:80 295 NVSGMK--DLLDYGWDYLAGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPS 372 (461) T ss_pred CcCCHH--HHHHHHHHHHhhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc Confidence 877654 788999999999999999988765555555555555544433 45666666666554433321111 Q ss_pred -c-chhhhhhhhhhhhhhhHHHHHH-------HHHHHHhCCCcCHHHHHHHh----CCCCCCCcceeeeccccccccccc Q lcl|Aclame:pro 345 -D-KGFYSKFNVDAILRADIKTRYE-------AYRTGIQGGFLKPNEARSKE----DLPPEAGGDRLLVNGNMLPIDMAG 411 (432) Q Consensus 345 -~-~~~~~~fd~~~l~~~d~~~~~~-------~~~~~~~~g~~t~nE~R~~~----gl~p~~~gd~~~~~~n~~~~~~~~ 411 (432) . ..+.+.|.+++|..++.+++++ ++.+++++|++|++|+|+.+ +++|.. ++.-.+. T Consensus 373 ~~p~~~~~~i~f~~L~~~s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~~---------~~~~~~~-- 441 (461) T protein:vir:80 373 IDPDSFEWAIEFNPLWNLDSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSS---------KFSGDSA-- 441 (461) T ss_pred cCccccceEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCc---------cCCCCCc-- Confidence 1 1124556668888888777755 47788999999999999865 233221 1100000 Q ss_pred cccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 412 QAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 412 ~~~~~gg~~~~~~~~~~~e~ 431 (432) +...-.-...+...++.++| T Consensus 442 ~~~~~~~~~~~~~~~e~~~g 461 (461) T protein:vir:80 442 EIDKLAKLVYDAYAKKNADG 461 (461) T ss_pred hhhhhhhhccccccccCCCC Confidence 00000001122233333444 No 119 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.80 E-value=9.7e-19 Score=119.33 Aligned_cols=417 Identities=11% Similarity=0.053 Sum_probs=241.9 Q ss_pred hHHHHHHhccccccccccccc--cCCchHHHHHhhcC-----CcCcccccHHHHh-ccHHHHHHHHHHHHhhccCceEEE Q lcl|Aclame:pro 3 IVDSVKKFFNFEKRQTSQVIE--LNKDDEKLLEWLGI-----SPSTISVKGKNAL-KVATVFACIKILSESVSKLPLKIY 74 (432) Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~-----~~~~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~~~~~~ 74 (432) +.++..... .+.......+ .... ..+..-... ...... ..+.++ +.+.|.+|++.+...|.+++|+|. T Consensus 1 ~~~~~~~~~--p~~~~g~~~~~~~~~~-~~~~~~~e~~~~lr~~~~~~-ly~~m~e~D~~i~s~l~~rk~av~~~~w~v~ 76 (469) T protein:vir:10 1 MTERVKTAA--PVSEAGYVFGSGVVDG-WTVWDPFEQTPELQWPQSVA-VYSRMDNEDSRVTSLLEAISLPIRSTPWRIR 76 (469) T ss_pred CCCcccCCC--Cccchhhhhhcccccc-hhhccccccccccccccchH-HHHHHHhhChHHHHHHHHHHHHHhcCCceEe Confidence 112111000 0000000000 0000 000000000 001111 234555 589999999999999999999997 Q ss_pred eecCCcceeeccchhHHhhhcc------------ccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-----C--ceEEE Q lcl|Aclame:pro 75 QEDEYGIQRGTKHYLNNLLRLR------------PNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-----G--KVQAL 135 (432) Q Consensus 75 ~~~~~~~~~~~~~~~~~lL~~~------------pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-----g--~~~~l 135 (432) ..+++.. ....+...|... -+...+|.+++..++.+.+.+|-++.++++... | .+..| T Consensus 77 p~~~~~e---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~~~~l 153 (469) T protein:vir:10 77 ANGASDE---VTEFVSRNLMVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFWLRKL 153 (469) T ss_pred cCCCCHH---HHHHHHHHHHhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCceeeeee Confidence 6544321 111122222211 112347888888988888999999999987532 3 35567 Q ss_pred EEEcCcceEE-EEcCcc-ceeccc------eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 136 WPIDASKVTV-YIDDVG-LLNSKT------KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSAS 207 (432) Q Consensus 136 ~~~~~~~v~~-~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~ 207 (432) .+.++.++.. ..+.+. ....+. .....+..++....+++...|++++....+..+|.|.+..++-.+..... T Consensus 154 ~~rp~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~fK~~ 233 (469) T protein:vir:10 154 APRPQWTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWLLKDK 233 (469) T ss_pred eecCcccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHHHHHH Confidence 7777765532 222211 111100 00011122233456888888877777677788999999999999999999 Q ss_pred HHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 208 ADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIR 287 (432) Q Consensus 208 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~ 287 (432) ..++...+.+..|.|--+.+.+...++++.+.+.+.+.....|. ++ .++++.|++++-+..+.....+.++.++..+ T Consensus 234 ~~~~w~~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~-~a--~~iip~~~~ie~~ea~g~~~~~~~li~~~d~ 310 (469) T protein:vir:10 234 LLRIEAATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGI-NA--GVGLAQGQILELLGVSGNLPDIRRAIEGHDR 310 (469) T ss_pred HHHHHHHHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCC-ce--EEEccCCceEEEeecCCCchHHHHHHHHHHH Confidence 99999999999999999999998889999988888888765553 22 4667888888877666555678888999999 Q ss_pred HHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh----cchhhhhhhhhhhhhhhHH Q lcl|Aclame:pro 288 QIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL----DKGFYSKFNVDAILRADIK 363 (432) Q Consensus 288 ~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~----~~~~~~~fd~~~l~~~d~~ 363 (432) +|+.+.-=.-... ....++++ ..+.........+.-.++.|++.||+.++.+-.. ....+.+|.++... .+.+ T Consensus 311 ~Isk~iLG~tlTs-~~~gGS~a-~~~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~~~e-~~~~ 387 (469) T protein:vir:10 311 SIALSGLAHFLNL-DGKGGSYA-LASVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFDPIG-SRQD 387 (469) T ss_pred HHHHHHhcccccc-cCccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecCCC-CcHH Confidence 9887753211111 11223333 2444556666778888888988888866433111 11122334344443 4566 Q ss_pred HHHHHHHHHHhCCCc-----CHHHHHHHhCCCCCCCcceeeeccc--cccccc-cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 364 TRYEAYRTGIQGGFL-----KPNEARSKEDLPPEAGGDRLLVNGN--MLPIDM-AGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 364 ~~~~~~~~~~~~g~~-----t~nE~R~~~gl~p~~~gd~~~~~~n--~~~~~~-~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ..++...++++.|++ +.+.+|+.+|+|+...++....+.. ..|... .+......+......+....+.. T Consensus 388 ~~a~~i~~l~~~G~~~~~~~~~~~~~e~~gip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (469) T protein:vir:10 388 LTAAAVKLLYDAGVFDDDPAVKRAIRQRFNLPSELNDTPSAEPEEPAAVPNQSAAPARTRSSGNADARARAPKADQG 464 (469) T ss_pred HHHHHHHHHHhcCCccCccccHHHHHHHhCCCCCCCCcccccchhcccCCCCCccccccCCCCCcccccccCCChHH Confidence 778999999999984 5677999999997765555433321 111111 11111111111212222222222 No 120 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.77 E-value=5.3e-20 Score=126.26 Aligned_cols=423 Identities=11% Similarity=0.064 Sum_probs=240.2 Q ss_pred CchHHHHHHhcccccccccc----ccccCCchHHHHHhhcCC--c-Ccc----------cccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQ----VIELNKDDEKLLEWLGIS--P-STI----------SVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~--~-~~~----------~v~~~~a~~~~~v~~~i~~ia 63 (432) |+++|++..+.......... ...-.........|.... . ... .-+...+..++.+..+|+.+. T Consensus 8 ~~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~~r~~~~w~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~ 87 (505) T protein:vir:96 8 PSLAQRMVNWAWYRYVEPQKNAARAFEAARRDRLGKAWLRRASRLSADEEIYADLASLVQRAREQSINNPYAKRFYQLLK 87 (505) T ss_pred cchhhcccchhhhhhHHHHHHhhhhcccccCCCccccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 99999876543221111100 000001111111121100 0 000 111233446889999999777 Q ss_pred Hhhcc-CceEEEeec--CCcceee----ccchhHHhhhcccc----ccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC-c Q lcl|Aclame:pro 64 ESVSK-LPLKIYQED--EYGIQRG----TKHYLNNLLRLRPN----PYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-K 131 (432) Q Consensus 64 ~~ia~-~~~~~~~~~--~~~~~~~----~~~~~~~lL~~~pn----~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g-~ 131 (432) ..+-. ..++..-.- ..+.... .-..++..+...+| ..++.+++...++..++..|++|+...+...+ . T Consensus 88 ~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~~ 167 (505) T protein:vir:96 88 NNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREHRGYPNKW 167 (505) T ss_pred HHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEeecCCCCc Confidence 77654 455554321 1111100 01123344444455 33578888999999999999999988764333 3 Q ss_pred eEEEEEEcCcceEEEEcC-----c----cce--e-ccceeEEEecc------------cCceEEEccceEEEEecCCCCC Q lcl|Aclame:pro 132 VQALWPIDASKVTVYIDD-----V----GLL--N-SKTKMWYVVNT------------GGQQRVLKPEEILHFKNGITLD 187 (432) Q Consensus 132 ~~~l~~~~~~~v~~~~~~-----~----~~~--~-~~~~~~~~~~~------------~~~~~~~~~~~vih~~~~~~~~ 187 (432) ...|..++|.++..-.+. . ++. . .....|+.... ......+++.+|+|+..+...+ T Consensus 168 ~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~f~~~r~g 247 (505) T protein:vir:96 168 GYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHTFVPWRPH 247 (505) T ss_pred ceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhhhcccCCc Confidence 557888888887533211 0 111 1 12222222210 1224558999999998888888 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH-HHHHHHHHHHHhcccccccceeecCCCcee Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA-KKVFRENFESMSSGLQNSHRIALMPVGYQF 266 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~ 266 (432) ...|.|.+..+...+.-.....+......+-.+...++++.+.+..... .+.-. .... .-..|.+..|..|.++ T Consensus 248 Q~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~----~~~~-~l~pG~i~~L~pGe~i 322 (505) T protein:vir:96 248 QNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPEDDQG----EIVE-EVEAGTYQLLPYGIRF 322 (505) T ss_pred cccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCccccccC----cccc-ccCCceeeecCCCCee Confidence 9999999999988888887777777777777778888888765432111 10000 0001 1135778889999999 Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHHHHHHHHH-----------HHHHHHHHHH-HHHH Q lcl|Aclame:pro 267 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQQQQQFY-----------TDTLQATLTM-YEQE 333 (432) Q Consensus 267 ~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~~~~~~~~-----------~~~l~P~~~~-i~~~ 333 (432) +.++.+-....+.+..+...+.||+.+|||...|.+ .+..|||...+....++ ..-++|+.+. ++.+ T Consensus 323 ~~~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a 402 (505) T protein:vir:96 323 KEHKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAGNLISMS 402 (505) T ss_pred eeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 998877666778899999999999999999998854 45678888776544333 3344443332 3333 Q ss_pred HHHhhccchhhcch--hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee------eeccccc Q lcl|Aclame:pro 334 MTYKLFLDSELDKG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL------LVNGNML 405 (432) Q Consensus 334 l~~~ll~~~~~~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~------~~~~n~~ 405 (432) +....+..+..... ..+.|-.-.....|....+++...++++|+.|.-|+-++.|.++.+-.+++ +.-.++. T Consensus 403 ~l~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~ 482 (505) T protein:vir:96 403 LLTQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAAGDDPEDVFDEIAWEEQLMRDKGVN 482 (505) T ss_pred HHcCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCC Confidence 33222222111111 124444444566789999999999999999999999888999985422221 1122322 Q ss_pred cccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 406 PIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 406 ~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) +.... .....+ .+.++++..+|+ T Consensus 483 ~~~~~--~~~~~~-~~~~~~~~~~d~ 505 (505) T protein:vir:96 483 PTPPE--QESKDA-TTDEEDDSASDD 505 (505) T ss_pred CCCCC--CCCCCC-CCCCCCCCCCCC Confidence 21111 111112 222222222222 No 121 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.77 E-value=5.8e-20 Score=126.03 Aligned_cols=428 Identities=10% Similarity=0.025 Sum_probs=230.4 Q ss_pred CchHHHHHHhccccccc---ccc----ccccCCchHHHHHhhcCCcC-cc----------cccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQ---TSQ----VIELNKDDEKLLEWLGISPS-TI----------SVKGKNALKVATVFACIKIL 62 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~g~~~~-~~----------~v~~~~a~~~~~v~~~i~~i 62 (432) |+|||++..+|.+.... ... ...-..... ...++....+ .. .-....+..++.+..+|+.+ T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~~r-~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~ 79 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAIQAYEAARPGR-THKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRL 79 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHhccccccCccc-cccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 99999999888643311 000 000000000 0111111000 00 01123334578899999988 Q ss_pred HHhhcc---CceEEEeecCCcceeec----cchhHHhhhccc--cccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---- Q lcl|Aclame:pro 63 SESVSK---LPLKIYQEDEYGIQRGT----KHYLNNLLRLRP--NPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---- 129 (432) Q Consensus 63 a~~ia~---~~~~~~~~~~~~~~~~~----~~~~~~lL~~~p--n~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---- 129 (432) .+.+-. +.++-.....++.+... -..++..+..++ ...++.+++...++..++..|++|+.+.+... T Consensus 80 ~~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~ 159 (548) T protein:vir:95 80 EERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYT 159 (548) T ss_pred HHhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeeccccccc Confidence 666543 33333222222211110 011233333332 33467889999999999999999998876432 Q ss_pred ---CceEEEEEEcCcceEEEEcCc------ccee---ccceeEEEec----------ccCceEEEccceEEEEecCCCCC Q lcl|Aclame:pro 130 ---GKVQALWPIDASKVTVYIDDV------GLLN---SKTKMWYVVN----------TGGQQRVLKPEEILHFKNGITLD 187 (432) Q Consensus 130 ---g~~~~l~~~~~~~v~~~~~~~------~~~~---~~~~~~~~~~----------~~~~~~~~~~~~vih~~~~~~~~ 187 (432) ..+..|..++|..+..-.+.. ++.. .....|+... .....+.+++++|+|+..+...+ T Consensus 160 ~g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~g 239 (548) T protein:vir:95 160 FATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIG 239 (548) T ss_pred CCcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCc Confidence 134578888888874322211 0110 1122222221 11235679999999999888888 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee-ecCCCcee Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA-LMPVGYQF 266 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~-vl~~g~~~ 266 (432) ...|.|.+..+...+.-............+-.+...++++.+.+..... +.....-.... . -..|.++ .|..|.++ T Consensus 240 Q~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~~~-~~~~~~~~~~~-~-~~pG~iv~~L~pGe~i 316 (548) T protein:vir:95 240 QNRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSYTV-EPGKDRKNRTI-P-IAPGMVFDDLEPGEDV 316 (548) T ss_pred cccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccC-CCCcccccccc-c-ccCCccccccCCCcee Confidence 9999999999998888887777777777777777888888765432110 00000000000 0 1234443 58899999 Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHH-----------HHHHHHHH-HHHHH Q lcl|Aclame:pro 267 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD-----------TLQATLTM-YEQEM 334 (432) Q Consensus 267 ~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~-----------~l~P~~~~-i~~~l 334 (432) +.++.+-....+.+..+...+.||+.+|||.+.|.+.-+.|||+..+....+++. -++|+-.. ++.++ T Consensus 317 ~~~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~ 396 (548) T protein:vir:95 317 GMIESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAYDGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYL 396 (548) T ss_pred eecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 8887765566788999999999999999999998766567888877755443332 23332222 22222 Q ss_pred HHhhccchh-hcch--hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee------eeccccc Q lcl|Aclame:pro 335 TYKLFLDSE-LDKG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL------LVNGNML 405 (432) Q Consensus 335 ~~~ll~~~~-~~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~------~~~~n~~ 405 (432) ....+..+. .... +.+.|-.-.....|....+++...++++|+.|.-|+-.+.|.++.+-.+++ +.-.++. T Consensus 397 l~G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~G~D~~ev~~q~a~E~~~~~~~GL~ 476 (548) T protein:vir:95 397 LARKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARARGRDPRELKKSRETEIKANRAAGLV 476 (548) T ss_pred HcCCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC Confidence 221111100 0011 122222233455789999999999999999999999888898874311111 1111111 Q ss_pred cccccccccCCCCCCCCCCCCC----------CCCCC Q lcl|Aclame:pro 406 PIDMAGQAYLKGGDTNGEVSKE----------GNEGN 432 (432) Q Consensus 406 ~~~~~~~~~~~gg~~~~~~~~~----------~~e~~ 432 (432) .-..+.....+++....+++++ ++|.. T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (548) T protein:vir:95 477 FSSDAYHQLVKSGMDPVEAVQKVYLGVGKMLTADEAR 513 (548) T ss_pred CCCcccccccccccCCCCchhhhccccccccccchhH Confidence 0000001111111111111111 11111 No 122 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.76 E-value=1.3e-17 Score=113.14 Aligned_cols=406 Identities=13% Similarity=0.059 Sum_probs=231.8 Q ss_pred Cc-hHHHHHHhccccccccccccccCCchH-------------HHHHhh----cCCcCcc-cccHHHHhccHHHHHHHHH Q lcl|Aclame:pro 1 MK-IVDSVKKFFNFEKRQTSQVIELNKDDE-------------KLLEWL----GISPSTI-SVKGKNALKVATVFACIKI 61 (432) Q Consensus 1 Mg-~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~----g~~~~~~-~v~~~~a~~~~~v~~~i~~ 61 (432) |+ |+|...+.+........+......... .+...+ +...... .+-.+-..+.+.|.+|+.. T Consensus 1 m~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~ 80 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSK 80 (512) T ss_pred CcceeCCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 43 333322222111111111111111000 011111 1100000 0111112368899999999 Q ss_pred HHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC---CCCceEEEEEE Q lcl|Aclame:pro 62 LSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD---RKGKVQALWPI 138 (432) Q Consensus 62 ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~---~~g~~~~l~~~ 138 (432) +...|.+++|.|....++... +......+...-+....+.+++..++ +.+.+|-+++++++. +...+..+.+. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~---~~~~a~~v~~~l~~~~~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~r 156 (512) T protein:vir:19 81 RRLAIQALEWRIAPARDASAQ---EKKDADMLNEYLHDAAWFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHHR 156 (512) T ss_pred HHHHHhCCCceEecCCCCCHH---HHHHHHHHHHHHhcCCCHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeeee Confidence 999999999999765432211 11222333222222223556666655 478899999999874 33457789999 Q ss_pred cCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQ 218 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n 218 (432) ++.++....++...... .........+++...++.++....+..+|.+.+..+.-.+.......++...+.+. T Consensus 157 ~~~~f~~~~~~~~~lr~-------~~~~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (512) T protein:vir:19 157 DPALFCANPDNLNELRL-------RDASYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEI 229 (512) T ss_pred ccccceeccCCCcEEEe-------cCCCCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99887665443321111 11222334577777776666666778899999999999999999999999999999 Q ss_pred cCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCC-hhHHHHHHHHHHHHHHHHHHh-cCC Q lcl|Aclame:pro 219 GLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLN-MSDAQFLENTELTIRQIATAF-GIK 296 (432) Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~I~~~~-gvp 296 (432) .|.|--+.+.+...++++.+.+.+.+.+.-+ + ..++++.|++++-+..+ .....+.++.++..++|+.+. |=. T Consensus 230 yG~P~~igky~~~a~~~ek~~L~~al~~~~~---~--a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~iLGqt 304 (512) T protein:vir:19 230 YGLPMRVGKYPTGSTNREKATLMQAVMDIGR---R--AGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKAILGGT 304 (512) T ss_pred cCCCeeEEecCCCCCHHHHHHHHHHHHHHhh---C--cEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHHHhhhh Confidence 9999999999988899999999988888633 2 34667777776655432 233347788888889998763 211 Q ss_pred hhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc---------hhhhhhhhhhhhhhhHHHHHH Q lcl|Aclame:pro 297 MHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKTRYE 367 (432) Q Consensus 297 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~~~~ 367 (432) ... .....++++ ..+.........+.-.++.|++.||+.++.+..... -.++.| +.....|.+..++ T Consensus 305 lTs-~~g~~Gs~a-~~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f--~~~e~eDl~~~a~ 380 (512) T protein:vir:19 305 LTT-EAGDKGARS-LGEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVF--DTSEAGDITALSD 380 (512) T ss_pred hcc-cccccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEe--cCCChhhHHHHHH Confidence 111 111122333 234455666777888899999999887654321111 113444 4445678888888 Q ss_pred HHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 368 ~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ...++.-.--++..++|+.+|+|....++....+....|.... ........+ ....++. T Consensus 381 ~~~~l~~G~~i~~~~i~e~~Gip~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~ 439 (512) T protein:vir:19 381 AIPKLAAGMRIPVSWIQEKLHIPQPVGDEAVFTIQPVVPDNGS--QKEAALSAE----DIPQEDD 439 (512) T ss_pred HHHHHhcCCCCCHHHHHHHhCCCCCCCccccccCCCccccccc--ccccccccc----CCCchhh Confidence 8887764445688889999999865544444322211111100 000000000 0001111 No 123 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.74 E-value=2.7e-17 Score=111.39 Aligned_cols=381 Identities=12% Similarity=0.012 Sum_probs=222.1 Q ss_pred CchHHHHHHhccccccccccccccCCchHHH-HHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKL-LEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 79 (432) .+..+.++.++. ......+.+ ....+.. .-..+.+++.+.|.+|++.+...|.+++|.+...+++ T Consensus 14 ~~~~d~~~~~~~----------~l~~~~~~il~~a~~g~----~~~y~~l~~D~~i~s~l~~rk~av~~~~w~i~p~~~~ 79 (488) T protein:vir:99 14 GDGRDITRPFIS----------GLQVPNDSILQRRGGND----LRVYEEILSDAQVKTVWGQRQLAVVSREWKVEAGGDR 79 (488) T ss_pred HhhhhhhccccC----------CCCCCChHHHHhhccCC----HHHHHHHhhChHHHHHHHHHHHHHhcCCceEEcCCCC Confidence 111111111100 000000111 1111110 0123556788999999999999999999999754332 Q ss_pred cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C--ceEEEEEEcCcceEEEEcCccceecc Q lcl|Aclame:pro 80 GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPIDASKVTVYIDDVGLLNSK 156 (432) Q Consensus 80 ~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~~~~~~v~~~~~~~~~~~~~ 156 (432) .. +......+...-+. ..+.+++..++ +.+.+|-++.++++... | .+..+.+.++.++.+..++... T Consensus 80 ~~----~~~~ae~v~~~l~~-~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~~~~l~---- 149 (488) T protein:vir:99 80 PI----DQAAAEHLEQQLQR-VGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYDQDGGLR---- 149 (488) T ss_pred hH----HHHHHHHHHHHHhC-CCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceeecCCCceE---- Confidence 11 11222333322222 35677777776 57889999999987543 3 4568889999887654433211 Q ss_pred ceeEEEecccCceEEEccc-e-EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCC Q lcl|Aclame:pro 157 TKMWYVVNTGGQQRVLKPE-E-ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLN 233 (432) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~-vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~ 233 (432) ............++.. . ++|.. ....+..+|.|.+..+.-.+.......++...+.+..|.|-.+.+.+. ..+ T Consensus 150 ---~~~~~~~~~g~~lp~~~~~i~~~~-~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~ 225 (488) T protein:vir:99 150 ---LLTPNNMFEGEPCPAPYFWHFSTG-ADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTAT 225 (488) T ss_pred ---EeccCCCCCccccccCceEEEEee-cCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCC Confidence 1111111223445433 3 34443 444567899999999999999999999999999999999988888875 568 Q ss_pred HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCCh-hHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH Q lcl|Aclame:pro 234 EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNM-SDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE 312 (432) Q Consensus 234 ~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~-~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~ 312 (432) +++.+++.+.+.+.-+ + ..++++.|++++-+..+- ....+.++.++..++|+.++-= ..+-...+.++++. . T Consensus 226 ~~ek~~l~~av~~~~~---~--~~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~iLG-qtlts~~~~Gs~a~-~ 298 (488) T protein:vir:99 226 PEDKAKLLAALHAIQT---D--SAIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKVGLG-QVASTQGTPGRLGN-D 298 (488) T ss_pred HHHHHHHHHHHHHHhc---C--cEEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHHHhh-hhhcccccccchhh-H Confidence 8888888888777633 2 346667776666554321 2224778888888998877311 11111112223333 3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhc-----chhhhhhhhhhhhhhhHHHHHHHHHHHHhC-CC-cCHHHHHH Q lcl|Aclame:pro 313 QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD-----KGFYSKFNVDAILRADIKTRYEAYRTGIQG-GF-LKPNEARS 385 (432) Q Consensus 313 ~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~-----~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~-g~-~t~nE~R~ 385 (432) +.........+.-.++.|++.||+.++.+.... ...++.|+ .....|.+++++...++++. |+ ++..++|+ T Consensus 299 ~vh~~v~~d~~~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~--~~e~edl~~~a~~~~~l~~~~G~~i~~~~i~e 376 (488) T protein:vir:99 299 DLQADVRLDLVKADADLICESFNLGPARWLTEWNFPGAQPPRVYRV--IEEPEDITAKAERDEKVFRMSGFRPTRGYVQE 376 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEec--CCCcccHHHHHHHHHHHHhhcCCCCCHHHHHH Confidence 344455677788888888888887764322111 11234444 44567888999999999986 64 68888999 Q ss_pred HhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 386 KEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 386 ~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+|+|+...++....+... . ...++ .++.+..+ T Consensus 377 ~~Gip~~~~~~~~~~~~~~---~----~~~~~-------~~~~~~~~ 409 (488) T protein:vir:99 377 TYGVEVESTQAEATAPTPS---T----EFAEG-------DQPSDPAA 409 (488) T ss_pred HcCCCCcccccccccCCCc---c----cCCCC-------CCCCCchH Confidence 9999986554443222110 0 00000 00001111 No 124 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.74 E-value=2.2e-17 Score=111.90 Aligned_cols=399 Identities=11% Similarity=0.021 Sum_probs=227.5 Q ss_pred CchHHHHHHhccccccccccccccC--CchHHHHHhhcCCcCcc---------cccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELN--KDDEKLLEWLGISPSTI---------SVKGKNALKVATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~---------~v~~~~a~~~~~v~~~i~~ia~~ia~~ 69 (432) =+|++.-.++............... ..........+..+... .-..+.+++++.|.+|++.+...|.++ T Consensus 3 ~~i~~~~g~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~~~~~~y~~m~~D~~i~s~l~~Rk~av~~~ 82 (491) T protein:vir:79 3 KGLWVSPTEFVKFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKAAVKAL 82 (491) T ss_pred CeeeCCCCCcccccccchhHHHHHhhhccccccccccccCcchhHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHhCC Confidence 2333322222111110000000000 00000000001111111 112355678999999999999999999 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C--ceEEEEEEcCcceEEE Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPIDASKVTVY 146 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~~~~~~v~~~ 146 (432) +|.+...+++.+ ....+..+|. + ..+.+++..++ +.+.+|-++.++++... | .+..+.++++.++.+. T Consensus 83 ~w~i~~~~~~~~---~a~~i~e~l~-~----~~~~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d 153 (491) T protein:vir:79 83 EWGLDRGKAKSR---VAKSIADVFA-D----LDLSRIATEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYD 153 (491) T ss_pred CcEEecCCCCHH---HHHHHHHHHh-c----CCHHHHHHHHH-HhhhhcceeEEEEEeecCCeeeEEeeeeecccceeec Confidence 999986554321 1122333332 2 24666666664 57889999999987544 3 3568999999888754 Q ss_pred EcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE Q lcl|Aclame:pro 147 IDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 226 (432) Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 226 (432) .++.. .............+++...|++++.......+|.|.+..+.-.+.......++...+.+..|.|--+. T Consensus 154 ~~~~l-------~l~~~~~~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~ig 226 (491) T protein:vir:79 154 PENQL-------RFRSKEHWVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVG 226 (491) T ss_pred cCCce-------EEeecCCCCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEE Confidence 43221 11111122234568888888887776777789999999999999999999999999999999999999 Q ss_pred EeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCC---ChhHHHHHHHHHHHHHHHHHHhcCChhhccCc Q lcl|Aclame:pro 227 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL---NMSDAQFLENTELTIRQIATAFGIKMHQLNDL 303 (432) Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~---~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~ 303 (432) +.+...++++.+.+.+.+.+... ++ .++++.|++++-+.. +.....+.+..++..++|+.+.-= ..+... T Consensus 227 ky~~~a~~~ek~~l~~al~~~~~---~a--~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~iLG--qtlTt~ 299 (491) T protein:vir:79 227 KHPRSASDAETNLLLDRLEDMVQ---DA--VAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIALLG--QNQTTE 299 (491) T ss_pred ecCCCCCHHHHHHHHHHHHHHhc---Ce--EEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHHhh--hhhccC Confidence 99988899999999888887633 22 466677766665532 222233677777888888776421 111111 Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh---cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCC-cC Q lcl|Aclame:pro 304 SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL---DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGF-LK 379 (432) Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~---~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~-~t 379 (432) ..++++..+ .........+.-.++.|++.||+ ++.+... .....+.|.+.... .+.+.+++...++++.|+ ++ T Consensus 300 ~~gs~a~~~-vh~~v~~~i~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~e~e-e~~~~~a~~~~~L~~~G~~i~ 376 (491) T protein:vir:79 300 ATSTRASAQ-AGLEVTDDIRDGDKAIVVEAMNM-LIRWICDLNFDGAARPVFDMWEQE-QVDEIQAGRDEKLTRAGARFT 376 (491) T ss_pred cccchhhHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEeecCcC-chhHHHHHHHHHHHhCCCccC Confidence 223443332 33344556666777777777774 3322111 11113345544432 223567889999999987 78 Q ss_pred HHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 380 PNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 380 ~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+++|+.+|+|+.+.++....+....+.. .... .....++....+. T Consensus 377 ~~~~~e~~Gip~~~~~e~~~~~~~~~~~~------~~~~-~~~~~~~~~~~d~ 422 (491) T protein:vir:79 377 PAYFKRAYNLQDGDLDERPLPVSAVDAVG------AASF-AEFEAPDQDALDA 422 (491) T ss_pred HHHHHHHhCCCCCCCCccccCcCcccccc------cccc-cccCCCCCcchHH Confidence 89999999999766555433222111000 0000 0000111111111 No 125 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.73 E-value=4.3e-18 Score=115.82 Aligned_cols=427 Identities=9% Similarity=0.021 Sum_probs=232.9 Q ss_pred CchHHHHHHhccccccccccc---cc--cCCchHHHHHhhcCCcC-----------cccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV---IE--LNKDDEKLLEWLGISPS-----------TISVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~g~~~~-----------~~~v~~~~a~~~~~v~~~i~~ia~ 64 (432) |..-.-+. +..+..... .. -......+..|.....+ -..-+...+..++.+.+||+.+.. T Consensus 1 ~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~ 76 (530) T protein:vir:38 1 MKIPSLVG----PDGKTSLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQD 76 (530) T ss_pred Cccceeec----CccccchHHHhhhhcccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH Confidence 44432221 110000000 00 00000011111110000 001122334468999999999998 Q ss_pred hhccCceEEEeecC------Ccceee----ccchhHHhhhcccc------ccCCHHHHHHHHHHHHHhcCCeEEEEeeCC Q lcl|Aclame:pro 65 SVSKLPLKIYQEDE------YGIQRG----TKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIEFDR 128 (432) Q Consensus 65 ~ia~~~~~~~~~~~------~~~~~~----~~~~~~~lL~~~pn------~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~ 128 (432) .+-...+++.-+-+ ++.+.. .-..++..+...|+ ..++.+++...++..++..|++|+.+.+.. T Consensus 77 nvVG~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~ 156 (530) T protein:vir:38 77 HIVGSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDS 156 (530) T ss_pred HhhCCCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeecc Confidence 88777777654311 111110 01123334444444 346889999999999999999999987654 Q ss_pred C-Cc--eEEEEEEcCcceEEEEc---Ccc----ce---eccceeEEEecc--cC----------ceEEEccceEEEEecC Q lcl|Aclame:pro 129 K-GK--VQALWPIDASKVTVYID---DVG----LL---NSKTKMWYVVNT--GG----------QQRVLKPEEILHFKNG 183 (432) Q Consensus 129 ~-g~--~~~l~~~~~~~v~~~~~---~~~----~~---~~~~~~~~~~~~--~~----------~~~~~~~~~vih~~~~ 183 (432) . |. ...|..++|..+....+ +.. +. ......|+.+.. .+ ....+++.+|+|+..+ T Consensus 157 ~~g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~ 236 (530) T protein:vir:38 157 DSTRLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEP 236 (530) T ss_pred CCCCccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccc Confidence 3 32 45788888887753221 110 10 112222333221 11 1233667799999988 Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC-----------HHHHHHHHHHHHHH---hc Q lcl|Aclame:pro 184 ITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-----------EDAKKVFRENFESM---SS 249 (432) Q Consensus 184 ~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~ 249 (432) ...+...|.|.+..+...+.-...-.+......+-.+...++++.+.+.. +++...+....... +. T Consensus 237 ~r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (530) T protein:vir:38 237 MEDGQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYS 316 (530) T ss_pred cCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhccc Confidence 88889999999999998888887777777777777777788887655321 11111111111110 00 Q ss_pred c---cccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHHHHHHHHHHH---- Q lcl|Aclame:pro 250 G---LQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQQQQQFYTD---- 321 (432) Q Consensus 250 g---~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~~~~~~~~~~---- 321 (432) + .=..|.+..|..|.+++.++.+-....+.+..+...+.||+.+|||.+.|.+ .+..|||+..+....+.+. T Consensus 317 ~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~ 396 (530) T protein:vir:38 317 AAPVRLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGR 396 (530) T ss_pred ccceeccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHH Confidence 0 0135678889999999988877666778899999999999999999998854 4667888777655444333 Q ss_pred -------HHHHHHHH-HHHHHHHhhccchhhcc---------hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHH Q lcl|Aclame:pro 322 -------TLQATLTM-YEQEMTYKLFLDSELDK---------GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEAR 384 (432) Q Consensus 322 -------~l~P~~~~-i~~~l~~~ll~~~~~~~---------~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R 384 (432) -+.|+... +++++....+..+.... -..+.+-.-.....|....+++...++++|+.|.-++- T Consensus 397 q~~~~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~ 476 (530) T protein:vir:38 397 RKFVASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKEC 476 (530) T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHH Confidence 22332222 33333332222110000 01123333344556889999999999999999999998 Q ss_pred HHhCCCCCCCccee------eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 385 SKEDLPPEAGGDRL------LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 385 ~~~gl~p~~~gd~~------~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+.|.++.+-.+++ +.-.++.+...+.. ....+..+.+.+.+.+.++ T Consensus 477 a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~-~~~~~~~~~~~~~~d~~~~ 529 (530) T protein:vir:38 477 AKRGDDYQEIFAQQVRESMERRAAGLNPPAWAAA-AFEAGVKKSNEEEQDGARA 529 (530) T ss_pred HHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCccc-ccCCCCCCCCCCCCCCCCC Confidence 89999885422211 11122222111111 1212222222222222222 No 126 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.72 E-value=2.1e-18 Score=117.49 Aligned_cols=425 Identities=12% Similarity=0.052 Sum_probs=221.7 Q ss_pred CchHHHHHHhcccccccccc----ccccCCchHHHHHhhcCCcCc---------ccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQ----VIELNKDDEKLLEWLGISPST---------ISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~---------~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) |+|+++ .+.......... ...-.........|-+.+... ..-....+..++.+..||+.+.+.+- T Consensus 1 m~~~~~--~~~a~~~~~~~~~~~~~y~aa~~~~~~~~~~~~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~vV 78 (495) T protein:vir:10 1 MNMTPS--GYQSLASGLLVPVGASAYEGASGGHRWQDIGDYGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAAAV 78 (495) T ss_pred CCcccc--cccccchhhhhHHHhhhhhccccCcccCCCCCCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhc Confidence 999876 222111110000 000000000000010000000 00112333457899999999988885 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccc--cccCCHHHHHHHHHHHHHhcCCeEEEEeeC--CCC--ceEEEEEEcCc Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRP--NPYMSSMNFFGSLEAQKNLYGNSYANIEFD--RKG--KVQALWPIDAS 141 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~p--n~~~~~~~f~~~~~~~~l~~G~~~~~~~~~--~~g--~~~~l~~~~~~ 141 (432) ...++..-..++......-..++..+..++ ...++.+++...++..++..|++|+.+... ..| .+..|..++|. T Consensus 79 G~Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqliepd 158 (495) T protein:vir:10 79 GNGLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIEPD 158 (495) T ss_pred CCCcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEechh Confidence 556655433322111111122333333332 334688888999999999999999987654 233 35678889998 Q ss_pred ceEEEEcC------c----ccee---ccceeEEEec-c---------cCceEEEccceEEEEecCCCCCcccccCHHHHH Q lcl|Aclame:pro 142 KVTVYIDD------V----GLLN---SKTKMWYVVN-T---------GGQQRVLKPEEILHFKNGITLDGLVGVPTMEYL 198 (432) Q Consensus 142 ~v~~~~~~------~----~~~~---~~~~~~~~~~-~---------~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~ 198 (432) .+..-.+. . ++.. .....|+... . ......+++++|+|+. +...+...|.|.+..+ T Consensus 159 ~l~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f-~~r~gQ~RGis~la~i 237 (495) T protein:vir:10 159 MLASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVT-VLTVRSDAGAPWFQLL 237 (495) T ss_pred hcCCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEecc-ccCCCcccCcchhHHH Confidence 88532111 0 1111 1122222211 1 1134669999999996 4566788999977654 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH--HHHHHHH-HHHHHHhcccccccceeecCCCceeeecCCChhH Q lcl|Aclame:pro 199 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNE--DAKKVFR-ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSD 275 (432) Q Consensus 199 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d 275 (432) . .+.-............+-.+...++++.+.+... +...... +.-...... -..|.+..|..|.+++.++.+... T Consensus 238 ~-~l~~l~~y~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~pG~i~~L~pGe~i~~~~p~~p~ 315 (495) T protein:vir:10 238 L-RLNELDQYEDAELVRKKTAALFAAFIQEATADSTGGPTIGQPKRSKGGKRITG-LNPGTLQYLQPGQEVKFSNPADVG 315 (495) T ss_pred H-HHHHhhHHHHHHHHHHHHhhhheeeeecCCCccccccccCccccccCccccee-cCCceeeecCCCCeeeeeCCCCCC Confidence 4 3555555555555555555677777776543210 0000000 000000111 135678899999999998876556 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhcc-CccccccccHHHHHHHHHHHH------------HHHHHHH-HHHHHHHhhccc Q lcl|Aclame:pro 276 AQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIEQQQQQFYTDT------------LQATLTM-YEQEMTYKLFLD 341 (432) Q Consensus 276 ~~~~e~~~~~~~~I~~~~gvp~~~l~-~~~~~~~~~~~~~~~~~~~~~------------l~P~~~~-i~~~l~~~ll~~ 341 (432) ..+.+..+...+.||+.+|||...|. ..+..|||+..+....+.+.. ++|+.+. ++.++....+.. T Consensus 316 ~~~~~f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~~ 395 (495) T protein:vir:10 316 TTYEPWLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVVI 395 (495) T ss_pred CCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC Confidence 67889999999999999999999884 455678888777554443332 2222222 222222211111 Q ss_pred hhhcc--h--hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee------eeccccccccccc Q lcl|Aclame:pro 342 SELDK--G--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL------LVNGNMLPIDMAG 411 (432) Q Consensus 342 ~~~~~--~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~------~~~~n~~~~~~~~ 411 (432) +.... . ..++|-.-.....|....+++...++++|+.|.-++-++.|.++.+-.+++ +.-.++ +.+..+ T Consensus 396 p~~~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl-~~~~~p 474 (495) T protein:vir:10 396 PDYLQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAERGYDMEELFDMISDANQLIDEYDL-RLDSDP 474 (495) T ss_pred CCchhhhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC-CCCCCC Confidence 11100 0 123344445566799999999999999999999999888999985322211 111122 111111 Q ss_pred cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 412 QAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 412 ~~~~~gg~~~~~~~~~~~e~~ 432 (432) .. ..+.....++..+.+++| T Consensus 475 ~~-~~~~~~~~~~~~~~~~~~ 494 (495) T protein:vir:10 475 RY-VNGSGAEQKSVMEAALNN 494 (495) T ss_pred Cc-CCCccCCCCCCCCCCCCC Confidence 11 111111112222222222 No 127 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.70 E-value=6.4e-16 Score=103.87 Aligned_cols=395 Identities=11% Similarity=0.025 Sum_probs=225.7 Q ss_pred CchHHHHHHhccccccccccc-----------cccCC-ch---HHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV-----------IELNK-DD---EKLLEWLGISPSTISVKGKNALKVATVFACIKILSES 65 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~-----------~~~~~-~~---~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ 65 (432) =+|++-=.+.+......+... ..... .- ..++.-.|.. .--.+.+++++.|.+|++.+... T Consensus 3 ~~i~~~~g~p~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~iLr~~~~~----~~~y~~m~~D~~i~s~l~~Rk~a 78 (491) T protein:vir:10 3 KGLWVSPTEFVTFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKD----IRVYRELRADAHVGGCVRRRKAA 78 (491) T ss_pred CceeCCCCCccCcccCChHHHHHHHhhhcccccccccCCccchHHHHHhcCCC----HHHHHHHhhChHHHHHHHHHHHH Confidence 122221111110000000000 00000 00 0011111110 11235567889999999999999 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C--ceEEEEEEcCcc Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G--KVQALWPIDASK 142 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g--~~~~l~~~~~~~ 142 (432) |.+++|.|...+++.+. ...+..+|. + ..+.+++..++ +.+++|.++.++++... | .+..+.++++.+ T Consensus 79 v~~~~w~i~~~~~~~~~---~e~v~e~l~-~----~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~ 149 (491) T protein:vir:10 79 VKALEWGLDRGKAKSRV---AKSIADVFA-D----LDLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADW 149 (491) T ss_pred HhCCCcEEecCCCCHHH---HHHHHHHHh-c----CCHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeecccc Confidence 99999999765443221 112333332 3 34677777775 57889999999987644 3 356899999988 Q ss_pred eEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCc Q lcl|Aclame:pro 143 VTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQV 222 (432) Q Consensus 143 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 222 (432) +.+..++... +...........+++...|+.++.......+|.|.+..+.-.+.......++...+.+..|.| T Consensus 150 f~~d~~~~l~-------~~~~~~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P 222 (491) T protein:vir:10 150 FVYDPENQLR-------FRSKDHWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSP 222 (491) T ss_pred eeeccCCceE-------EecCCCCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 8754433211 111112233456788888877766667778999999999999999999999999999999999 Q ss_pred ceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCC--Chh-HHHHHHHHHHHHHHHHHHhcCChhh Q lcl|Aclame:pro 223 KGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL--NMS-DAQFLENTELTIRQIATAFGIKMHQ 299 (432) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~--~~~-d~~~~e~~~~~~~~I~~~~gvp~~~ 299 (432) --+.+.+...++++.+++.+.+.+... + ..++++.|++++-+.. +.. ...+.+..++..++|+.+.-= .. T Consensus 223 ~~igky~~~a~~~ek~~l~~al~~~~~---~--a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~iLG--qt 295 (491) T protein:vir:10 223 MLVGKHPRSASDGEKNLLLDCLEDMVQ---D--AVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIALLG--QN 295 (491) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHhc---C--cEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHHHhh--hh Confidence 999999999999999999988888633 2 3466677776665532 222 223667778888888776321 11 Q ss_pred ccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh---hcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC Q lcl|Aclame:pro 300 LNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSE---LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG 376 (432) Q Consensus 300 l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~---~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g 376 (432) +.....++++.. +.........+.-.++.|+..+|+ ++.+-. ....-+..|.+.... .+.+.+++...++++.| T Consensus 296 lTt~~~gs~a~~-~vh~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~~-e~~~~~a~~~~~L~~~G 372 (491) T protein:vir:10 296 QTTEATSTRASA-QAGLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQE-QVDEIQAGRDQKLTQAG 372 (491) T ss_pred cccCcccchhHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCcC-chhHHHHHHHHHHHhCC Confidence 211122333332 233344555666677777777764 332111 011112334444432 33467899999999998 Q ss_pred C-cCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 377 F-LKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 377 ~-~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) + ++..++|+.+|+|+-+.+..........+.. .......... .....++ T Consensus 373 ~~i~~~~i~e~~Gip~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~d~ 422 (491) T protein:vir:10 373 ARFTPAYFKRAYNLQDGDLDERPLPVSAVDTVG------AASFAEFEAP-DQDALDA 422 (491) T ss_pred CcCCHHHHHHHhCCCCCCcCccccccCCCCCcc------cccccccCCC-CCCchHH Confidence 7 7888899999999765444332111100000 0000000000 0000011 No 128 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.70 E-value=2.3e-17 Score=111.81 Aligned_cols=432 Identities=8% Similarity=0.016 Sum_probs=229.9 Q ss_pred CchHHHHHHhccccccccccccc--cCCchHHHHHhhcCCcCc-----------ccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE--LNKDDEKLLEWLGISPST-----------ISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~-----------~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) |=-+-.++..-+...+....... -+.....+..|.....+. ..-....+..++.+..||+.+...+- T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvV 82 (533) T protein:vir:34 3 TPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIV 82 (533) T ss_pred CchhhhhhcccccchHHHHHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhh Confidence 11111111100000000000000 000001111111110000 01112333468899999999988886 Q ss_pred cCceEEEeecC------Ccceee----ccchhHHhhhcccc------ccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-C Q lcl|Aclame:pro 68 KLPLKIYQEDE------YGIQRG----TKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-G 130 (432) Q Consensus 68 ~~~~~~~~~~~------~~~~~~----~~~~~~~lL~~~pn------~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g 130 (432) ...+++.-+-+ ++.+.. .-..++..+...++ ..++.+++...++..++..|++|+.+.+... | T Consensus 83 G~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~g 162 (533) T protein:vir:34 83 GSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSS 162 (533) T ss_pred CCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccCCC Confidence 66776654311 111110 01123344444443 3457889999999999999999998876543 3 Q ss_pred c--eEEEEEEcCcceEEEEcC---ccc----e---eccceeEEEecc--cC----------ceEEEccceEEEEecCCCC Q lcl|Aclame:pro 131 K--VQALWPIDASKVTVYIDD---VGL----L---NSKTKMWYVVNT--GG----------QQRVLKPEEILHFKNGITL 186 (432) Q Consensus 131 ~--~~~l~~~~~~~v~~~~~~---~~~----~---~~~~~~~~~~~~--~~----------~~~~~~~~~vih~~~~~~~ 186 (432) . ...|..++|..+..-.+. ..+ . ......|+.+.. .+ ....+++.+|||+..+... T Consensus 163 ~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~r~ 242 (533) T protein:vir:34 163 RLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVED 242 (533) T ss_pred CccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeeccccCC Confidence 2 457788888877543221 111 1 112222333211 11 1233677899999988888 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC-----------HHHHHHHH---HHHHHHhccc- Q lcl|Aclame:pro 187 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-----------EDAKKVFR---ENFESMSSGL- 251 (432) Q Consensus 187 ~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~~~~g~- 251 (432) +...|.|.+..+...+.-...-........+-.+...++++.+.+.. +++.+.+. ......+.+. T Consensus 243 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (533) T protein:vir:34 243 GQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAP 322 (533) T ss_pred CcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCcce Confidence 89999999999998888888777777777777778888888664321 11111111 1111111111 Q ss_pred --ccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHHHHHHHHHH------- Q lcl|Aclame:pro 252 --QNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTD------- 321 (432) Q Consensus 252 --~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~~~~~~~~~------- 321 (432) =..|.+..|..|.+++.++.+-....+.+..+...+.||+.+|||.+.|.+. +..|||+..+....+.+. T Consensus 323 ~~l~pG~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~ 402 (533) T protein:vir:34 323 VRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKF 402 (533) T ss_pred eeccCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHH Confidence 1346788899999999888776667788999999999999999999988554 577888876644333332 Q ss_pred ----HHHHHHHH-HHHHHHHhhccchhh-------cch--hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 322 ----TLQATLTM-YEQEMTYKLFLDSEL-------DKG--FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE 387 (432) Q Consensus 322 ----~l~P~~~~-i~~~l~~~ll~~~~~-------~~~--~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~ 387 (432) .+.|+-+. +++++....+.-+.. ... ..+.|-.-.....|....+++...++++|+.|.-|+-++. T Consensus 403 ~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~ 482 (533) T protein:vir:34 403 VASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKR 482 (533) T ss_pred HHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc Confidence 23333332 222232222211100 000 1223333444667888999999999999999999999899 Q ss_pred CCCCCCCccee------eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 388 DLPPEAGGDRL------LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 388 gl~p~~~gd~~------~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |.++.+-.+++ +.-.++.+...+......+...+.+.+++..... T Consensus 483 G~D~~ev~~q~a~e~~~~~~~gl~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 533 (533) T protein:vir:34 483 GDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFESGLRQSTEEEKSDSRAA 533 (533) T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCCCCCCcCccCCCCCCCCCCcccCCCC Confidence 99985432221 1111221111111111111111111111111111 No 129 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.70 E-value=6.8e-16 Score=103.74 Aligned_cols=411 Identities=13% Similarity=0.081 Sum_probs=214.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh--------c----------CCcCcccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL--------G----------ISPSTISVKGKNALKVATVFACIKIL 62 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g----------~~~~~~~v~~~~a~~~~~v~~~i~~i 62 (432) |.=- ........-..+.+.+ + +...... ..+.+++.+.|.+|++.+ T Consensus 1 ~~~~---------------~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~-ly~~m~~D~hi~s~l~~R 64 (488) T protein:vir:95 1 MADI---------------TETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIK-TFQLMMRDPAVAASVNII 64 (488) T ss_pred CCCc---------------cccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHH-HHHHHhhChHHHHHHHHH Confidence 2110 0000000001111111 0 0001111 246667899999999999 Q ss_pred HHhhccCceEEEeecCCcceeeccchhHHhhhccc-cccCCHHHHHHHHHHHHHhcCCeEEEEeeCC------------- Q lcl|Aclame:pro 63 SESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRP-NPYMSSMNFFGSLEAQKNLYGNSYANIEFDR------------- 128 (432) Q Consensus 63 a~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~p-n~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~------------- 128 (432) ...|.+++|.|...++... ....-.....+...- +-..++.+++..+. +.+.+|-++.++++.. T Consensus 65 k~av~~~~w~v~p~~~~~~-d~~~~~~a~~v~~~l~~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~ 142 (488) T protein:vir:95 65 KMFVRKVNWRFVPPKGKEQ-DPKMLERADFFNSLMDDMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFD 142 (488) T ss_pred HHHHhcCCceEecCCCCch-hHHHHHHHHHHHHHHhccCccHHHHHHHHH-Hhhcccceeeeeeeecccccccccccccc Confidence 9999999999975432211 111111223332222 22235667777775 5788999999998753 Q ss_pred CCc--eEEEEEEcCcc---eEEEEcCccceecccee--------EEEecccCceEEEccceEEEEecCCCCCcccccCHH Q lcl|Aclame:pro 129 KGK--VQALWPIDASK---VTVYIDDVGLLNSKTKM--------WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTM 195 (432) Q Consensus 129 ~g~--~~~l~~~~~~~---v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~ 195 (432) +|. +..+.+.++.+ +.+..++......+... ...+........+|+...|+.++....+..+|.+.+ T Consensus 143 dg~~~~~~i~~Rpq~~~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLl 222 (488) T protein:vir:95 143 DGLIGWAKLPIRNQSTLDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPL 222 (488) T ss_pred CCeeeeeeeeecCcccccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHH Confidence 232 44566666643 32222221111110000 000011122345788887777767677788999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC----CCCCHHHHHHHHHHHHHHhc---ccccccceeecCCCceeee Q lcl|Aclame:pro 196 EYLKSTLENSASADKFINNFYKQGLQVKGLVQYV----GDLNEDAKKVFRENFESMSS---GLQNSHRIALMPVGYQFQP 268 (432) Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---g~~n~g~~~vl~~g~~~~~ 268 (432) ..+.-.........++...+.+..+.+--+...+ ...++++.+.+.+...+... +...+| ++++.|+++.. T Consensus 223 r~~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag--~iiP~g~~~~~ 300 (488) T protein:vir:95 223 LNAYVPWKYKVQIEEYEAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAG--LIWPRYIDPDT 300 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhh--eeecccccccc Confidence 9999999999999999999998765544444443 23345555555555544322 111233 45566654322 Q ss_pred ---------cCCC-hhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 269 ---------ISLN-MSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL 338 (432) Q Consensus 269 ---------~~~~-~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l 338 (432) ++.. ..-..+.++.++..++|+.+.-=.--..+....++++ ..+.........+.-.++.|++.||+.+ T Consensus 301 k~~~~e~~l~~~~~~~~~~~~~li~~~d~~Isk~iLGqtLT~~~~~~Gs~A-l~~vh~ev~~~i~~aDa~~i~~tln~~l 379 (488) T protein:vir:95 301 KEDIFEFSLVSRQGAKAYDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFS-LADSKTSLLAMSVDILLKQIKNVINRDL 379 (488) T ss_pred chhhhhhhccccccCCchhHHHHHHHHHHHHHHHHhccccccccCcchhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2221 1222356677777788876653211111111122322 2334456666778888889999998876 Q ss_pred ccchhh----cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCH-----HHHHHHhCCCCCCCcceeeeccccccccc Q lcl|Aclame:pro 339 FLDSEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKP-----NEARSKEDLPPEAGGDRLLVNGNMLPIDM 409 (432) Q Consensus 339 l~~~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~-----nE~R~~~gl~p~~~gd~~~~~~n~~~~~~ 409 (432) +.+.-. ....+.+|-++.....|+++.++...++++.|+.-+ +.+|+.+|+|+-+.+.....+....+... T Consensus 380 i~~l~~~Nfg~~~~~P~~~~~~~e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~gip~~~~~e~~~~~~~~~~~~~ 459 (488) T protein:vir:95 380 VAQTYALNMWDDEEHVQITYDDIETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHIGLPPADESQPVSEKLSPNSQSR 459 (488) T ss_pred HHHHHHhcCCCCCCccEEEecCcChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCccccccCCCCCCCC Confidence 543211 112223344455667888999999999999998764 56999999997665554433322111111 Q ss_pred cccccCCCCCC-----CCCCCCCCCCCC Q lcl|Aclame:pro 410 AGQAYLKGGDT-----NGEVSKEGNEGN 432 (432) Q Consensus 410 ~~~~~~~gg~~-----~~~~~~~~~e~~ 432 (432) .+......++. ..+.+..+++.+ T Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 487 (488) T protein:vir:95 460 SGDGYKTAGEGTAKTPSAKDPSTANKAN 487 (488) T ss_pred CCcccCCCcccCCcccccccchhhhhcc Confidence 11111100110 111112222222 No 130 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=99.69 E-value=1.8e-18 Score=117.81 Aligned_cols=421 Identities=9% Similarity=0.022 Sum_probs=239.0 Q ss_pred CchHHHHHHhccccccccccccccCCchH-------HHHHhhcCCcCcccccHHHHhc-cHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDE-------KLLEWLGISPSTISVKGKNALK-VATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~a~~-~~~v~~~i~~ia~~ia~~~~~ 72 (432) |.++.-=.....++.+..+..+....-.+ .+....+......-...-.++. .|.++..+.+|++++|++.+. T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~LtaAsa~l~~~~~~~~kt~~~~~~~WQ~eAW~~~d~vpELry~vgW~~~a~SR~rL~ 80 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIALAGATAQVDLGASSSWKTWKFGNKDWQTEGWRLYDIIPEHHFLAGRIGDSVAQARLY 80 (646) T ss_pred CcccCCCCCCCCcccccccchhhhhhccccccCCCcceeecCCCcchhhhHHHHHHHhhhhhHhhHhhhhhhhhceeeee Confidence 77652100000000000000000000000 0000000001111112233343 488899999999999999999 Q ss_pred EEeecCCccee--eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE---eeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 73 IYQEDEYGIQR--GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI---EFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 73 ~~~~~~~~~~~--~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~---~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) .-+.++.|... ..+++...+....-.......++++.+..++-+-|++|++. .....+--...+++....|... T Consensus 81 aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~~~~W~vvt~~Ev~~t- 159 (646) T protein:vir:10 81 VTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAAEGSWFVVTGSAISRT- 159 (646) T ss_pred eeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCCccceeeecHHHhccC- Confidence 99988777533 23455555555444445567889999999999999999974 1111122233555555555321 Q ss_pred cCccceeccceeEEEecccCceEEEccceEEEEe--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 148 DDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) +. .. .........++..+.++..+++ || ++.+....+-.||+.+++..+.-.....+...+..+....-.|+ T Consensus 160 -g~---~~-~i~~p~~~~g~~~v~~~~~d~l-vRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~GnGv 233 (646) T protein:vir:10 160 -GD---EI-AVRRPQQRGGSKLVLVDGQDIL-IRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTGAGI 233 (646) T ss_pred -CC---ee-eeecCccCCCCCcceecCCceE-EEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhcCce Confidence 11 00 0001111113344455666663 35 56677788999999999999998888888888888888888899 Q ss_pred EEeCCCCC-------HHHHHHHHHHH----HHHhcccc--cccceeecCC---------CceeeecCCChhHHHHHHHHH Q lcl|Aclame:pro 226 VQYVGDLN-------EDAKKVFRENF----ESMSSGLQ--NSHRIALMPV---------GYQFQPISLNMSDAQFLENTE 283 (432) Q Consensus 226 ~~~~~~~~-------~~~~~~~~~~~----~~~~~g~~--n~g~~~vl~~---------g~~~~~~~~~~~d~~~~e~~~ 283 (432) +.++..++ +.....+.+.| ...+...+ .+--++++.. .+|.-.+.... +--.+.+++ T Consensus 234 LfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~ei-te~aiktR~ 312 (646) T protein:vir:10 234 MFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSEL-SAEITPMKD 312 (646) T ss_pred eeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchh-hHHHhhhHH Confidence 98888653 12233444333 33443322 2333444432 23332333333 333578999 Q ss_pred HHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcch------hhhhhhhhhh Q lcl|Aclame:pro 284 LTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG------FYSKFNVDAI 357 (432) Q Consensus 284 ~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~------~~~~fd~~~l 357 (432) ..++++|..+-|||..|.+.++.|.-+.-+....-++ .|.|.+..|+++|++.+|.+.....| |-++||.+.| T Consensus 313 daI~RlA~glDIppE~LLGlgd~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~DaS~L 391 (646) T protein:vir:10 313 KAIARLASSAEIPGEVLTGIGDANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDTSTL 391 (646) T ss_pred HHHHHHHhccCCchhheeeccccceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecCccc Confidence 9999999999999999877778887777777777777 79999999999999999877655555 5789999987 Q ss_pred hhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce--e----------------eecccccccccccc------- Q lcl|Aclame:pro 358 LRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR--L----------------LVNGNMLPIDMAGQ------- 412 (432) Q Consensus 358 ~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~--~----------------~~~~n~~~~~~~~~------- 412 (432) .. + -.+.+.+..+++.|.||-...|+.+||...++-+. . +.|.-..+++-+.. T Consensus 392 t~-~-pd~~deA~qa~drGAIt~eAlrk~~Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~lpp 469 (646) T protein:vir:10 392 AS-K-PNRLDEAIQLHERNLIKDEEVVKAGAFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVGLPP 469 (646) T ss_pred cc-C-CCCcHHHHHHHHcCCccHHHHHHHhcccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccccCC Confidence 42 2 23456677888999999999999999986432111 0 01111111111110 Q ss_pred ---ccCCCCCCCCCCCC------CCCCCC Q lcl|Aclame:pro 413 ---AYLKGGDTNGEVSK------EGNEGN 432 (432) Q Consensus 413 ---~~~~gg~~~~~~~~------~~~e~~ 432 (432) +...|++.+.+++. ..++++ T Consensus 470 ~~~~~~dg~~~~~e~~g~~~~~E~~~~pd 498 (646) T protein:vir:10 470 TAAQRTDGDLDDDESEGAPNGGEAPDQPD 498 (646) T ss_pred cccccccCCCCChhhcCCCCCCccCCCCC Confidence 00001111111110 001111 No 131 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.67 E-value=2.9e-17 Score=111.29 Aligned_cols=429 Identities=9% Similarity=0.025 Sum_probs=229.0 Q ss_pred hHHHHHHhcccccccccc--------ccc-cCCchHHHHHhhcCCcCc-c----------cccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 3 IVDSVKKFFNFEKRQTSQ--------VIE-LNKDDEKLLEWLGISPST-I----------SVKGKNALKVATVFACIKIL 62 (432) Q Consensus 3 ~~~~l~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~g~~~~~-~----------~v~~~~a~~~~~v~~~i~~i 62 (432) |.+...+........... ... -+..+..+..|.....+. . .-....+..++.+..+|+.+ T Consensus 1 m~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~~~ 80 (553) T protein:vir:63 1 MTKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVGYQ 80 (553) T ss_pred CcchhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 223222221111100000 000 000011111121111000 0 01123334678999999988 Q ss_pred HHhhccCceEEEeecC-------Ccceee----ccchhHHhhhcccc------ccCCHHHHHHHHHHHHHhcCCeEEEEe Q lcl|Aclame:pro 63 SESVSKLPLKIYQEDE-------YGIQRG----TKHYLNNLLRLRPN------PYMSSMNFFGSLEAQKNLYGNSYANIE 125 (432) Q Consensus 63 a~~ia~~~~~~~~~~~-------~~~~~~----~~~~~~~lL~~~pn------~~~~~~~f~~~~~~~~l~~G~~~~~~~ 125 (432) ...+-...+++.-.-+ ++.... .-..++..+.+.++ ..++.+++...++..++..|++|+.+. T Consensus 81 ~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~ 160 (553) T protein:vir:63 81 RDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLATAE 160 (553) T ss_pred HHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEEee Confidence 8887666777654311 111100 01123344444443 445788889999999999999999876 Q ss_pred eCCC-Cc--eEEEEEEcCcceEEEEcCc-------cce---eccceeEEEecc-cC----------------ceEEEccc Q lcl|Aclame:pro 126 FDRK-GK--VQALWPIDASKVTVYIDDV-------GLL---NSKTKMWYVVNT-GG----------------QQRVLKPE 175 (432) Q Consensus 126 ~~~~-g~--~~~l~~~~~~~v~~~~~~~-------~~~---~~~~~~~~~~~~-~~----------------~~~~~~~~ 175 (432) .... |. ...|..++|.++..-.+.. ++. ......|+.+.. -| ....+++. T Consensus 161 ~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~a~ 240 (553) T protein:vir:63 161 WDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWGRR 240 (553) T ss_pred eccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccChh Confidence 5432 22 3567888888875433221 111 111222222110 00 12357899 Q ss_pred eEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHH-------------- Q lcl|Aclame:pro 176 EILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR-------------- 241 (432) Q Consensus 176 ~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-------------- 241 (432) +|||+..+...+...|.|.+..+...+.-............+-.+...++++.+.+. +...+.+. T Consensus 241 ~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 319 (553) T protein:vir:63 241 QVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELPP-EFIHSQMSGGSPNADMVGIFGK 319 (553) T ss_pred HheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCh-hhhhhhcccccccccccccccc Confidence 999999888888999999999999988888887777777777777788888866432 11111111 Q ss_pred --HHHHHHhcc----cccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHHHH Q lcl|Aclame:pro 242 --ENFESMSSG----LQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQQ 314 (432) Q Consensus 242 --~~~~~~~~g----~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~~~ 314 (432) ......+.+ .-..|.+..|..|.+++.++.+-....|.+..+...+.||+.+|||...|.+ .+..|||+..+. T Consensus 320 ~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R~~ 399 (553) T protein:vir:63 320 YMDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQAG 399 (553) T ss_pred cccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHH Confidence 111111111 1135778889999999988877566778899999999999999999998854 456788887665 Q ss_pred HHHHHHH-----------HHHHHHHH-HHHHHHHhhccchhhcch------------hhhhhhhhhhhhhhHHHHHHHHH Q lcl|Aclame:pro 315 QQQFYTD-----------TLQATLTM-YEQEMTYKLFLDSELDKG------------FYSKFNVDAILRADIKTRYEAYR 370 (432) Q Consensus 315 ~~~~~~~-----------~l~P~~~~-i~~~l~~~ll~~~~~~~~------------~~~~fd~~~l~~~d~~~~~~~~~ 370 (432) ...+.+. -++|+-+. +++++-...+.-+..... ..+.+-.-.....|....+++.. T Consensus 400 ~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A~~ 479 (553) T protein:vir:63 400 IAMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQAAV 479 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHHHH Confidence 4443332 23332222 222222111111110000 01223333445578889999999 Q ss_pred HHHhCCCcCHHHHHHHhCCCCCCCcce----------eeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 371 TGIQGGFLKPNEARSKEDLPPEAGGDR----------LLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 371 ~~~~~g~~t~nE~R~~~gl~p~~~gd~----------~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .++.+|+.|.-|+-++.|.++.+-.++ +=++....|....+....+....+++++.+.++.+ T Consensus 480 ~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (553) T protein:vir:63 480 MRIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSLGDGRDAATGIAEDPAAAQTSQQ 551 (553) T ss_pred HHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCccccCCCcccCCCCCCCCCCCCcccc Confidence 999999999999988889987532111 11111111111111111111111111111111111 No 132 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.65 E-value=7.4e-16 Score=103.54 Aligned_cols=403 Identities=9% Similarity=-0.000 Sum_probs=216.5 Q ss_pred CchHHHHHHhcccccc-ccccccc---cCCchHHHH--HhhcCCc----------CcccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR-QTSQVIE---LNKDDEKLL--EWLGISP----------STISVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~-~~~~~~~---~~~~~~~~~--~~~g~~~----------~~~~v~~~~a~~~~~v~~~i~~ia~ 64 (432) |.--.+ +.-..... ...+... .......+. .+.|..+ .... ..+.+++.+.|.+|+..+.. T Consensus 1 m~k~~~--k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~-ly~~m~~D~hi~s~l~~Rk~ 77 (448) T protein:vir:79 1 MAKRGR--KPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLL-VYHKMLSDGTVKNALNYIFG 77 (448) T ss_pred CCCCCC--CCccccCcccccccccchhhhhhhhhhcccccccccccchhHhhccccchH-HHHHHhhChHHHHHHHHHHH Confidence 332111 10000000 0000000 000000000 0111111 1111 24556778999999999999 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccc---cCCHHHHHHHHHHHHHhcCCeEEEEeeC--CCCc--eEEEEE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNP---YMSSMNFFGSLEAQKNLYGNSYANIEFD--RKGK--VQALWP 137 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~---~~~~~~f~~~~~~~~l~~G~~~~~~~~~--~~g~--~~~l~~ 137 (432) .|.+++|.|...+++........-+...| ..+.. ..++.+++..+ .+.+++|-+++++++. .+|. +..|.+ T Consensus 78 av~~~~w~v~p~~~~~~~~~~ae~v~~~l-~~~~~~~~~~~f~~~~~~~-lda~~~G~s~~Eivw~~~~~g~~~~~~l~~ 155 (448) T protein:vir:79 78 RIRSAKWYVEPASTDPEDIAIAAFIHAQL-GIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDKIVP 155 (448) T ss_pred HHhcCCceEecCCCCHHHHHHHHHHHHHh-hhhhhhhccCCHHHHHHHH-HHhhhhcceeEEEEeeecCCCceecccccc Confidence 99999999965333221111111111222 12222 23445555444 4478899999999874 3454 345666 Q ss_pred EcCcceE---EEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 138 IDASKVT---VYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINN 214 (432) Q Consensus 138 ~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 214 (432) .++..++ +..++................+.....+|...++|..+ ...+..+|.+.+..++-.+.......++... T Consensus 156 r~~~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~-~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~ 234 (448) T protein:vir:79 156 IHPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLH-NDDGSFTGQSALRAAVPHWLAKRALILLINH 234 (448) T ss_pred cCCccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEec-CccCCcccchhHHHHHHHHHHHHHHHHHHHH Confidence 6766433 22322111111000000000111234568888998875 3556789999999999999999999999999 Q ss_pred HHhccCCcceEEEeCCCCC--HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 215 FYKQGLQVKGLVQYVGDLN--EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 215 ~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) +.+..|.|--+.+.+...+ +++.+.+.+...+...|. ++ .++++.|++++-+.......++.++.++..++|+.+ T Consensus 235 f~E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~-~a--~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk~ 311 (448) T protein:vir:79 235 GLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKP-RH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARA 311 (448) T ss_pred HHHHcCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCC-ce--EEEecCCceEEEEecCCCcccHHHHHHHHHHHHHHH Confidence 9999999988888876654 456666666655544443 33 366788888777655444445667888888888776 Q ss_pred hcCChhhcc-CccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh-----cch-hhhhhhhhhhhhhhHHHH Q lcl|Aclame:pro 293 FGIKMHQLN-DLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-----DKG-FYSKFNVDAILRADIKTR 365 (432) Q Consensus 293 ~gvp~~~l~-~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-----~~~-~~~~fd~~~l~~~d~~~~ 365 (432) .-= ..+. ..+.++++.............+.-.++.|++.||+.++.+.-. ... .++.| +.....|++.. T Consensus 312 iLG--qtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f--~~~e~~Dl~~~ 387 (448) T protein:vir:79 312 LGI--DFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTF--EMEERNDFSAA 387 (448) T ss_pred Hhh--hhhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEe--cCCChHHHHHH Confidence 532 1121 1222233333333334455667778888998888876543211 111 13445 44466788889 Q ss_pred HHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCC-CCCCCCC Q lcl|Aclame:pro 366 YEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS-KEGNEGN 432 (432) Q Consensus 366 ~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~-~~~~e~~ 432 (432) ++...+++..+-..-+-+|+.+|+|.-..++... + . +..+...+ .+.-.+| T Consensus 388 a~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~---a------~-------~~~~~~~~~~~~~~~~ 439 (448) T protein:vir:79 388 ANLMGMLINAVKDSEDIPTELKALIDALPSKMRR---A------L-------GVVDEVREAVRQPADS 439 (448) T ss_pred HHHhhhhhccchhhHHHHHHhhcCCCCCCCcccc---c------c-------CCCCcccccccCCccc Confidence 9999999887755444578888988432222110 0 0 11111111 1122223 No 133 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.65 E-value=2.1e-15 Score=101.04 Aligned_cols=400 Identities=11% Similarity=0.031 Sum_probs=218.8 Q ss_pred CchHHHHHHhccccccccccccccCCch--------HHHHH--hhcCC----------cCcccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDD--------EKLLE--WLGIS----------PSTISVKGKNALKVATVFACIK 60 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~g~~----------~~~~~v~~~~a~~~~~v~~~i~ 60 (432) |.--++ ..+...+......... ..+.. +.|.. ..... ..+.+++.+.|.+|+. T Consensus 1 m~kk~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~-ly~~m~~D~hi~s~l~ 73 (448) T protein:vir:77 1 MAKRGR------KPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLL-VYHKMLSDGTVKNALN 73 (448) T ss_pred CCCCCC------CCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchH-HHHHHhhChHHHHHHH Confidence 432211 0000000000000000 00000 00111 11111 1455677899999999 Q ss_pred HHHHhhccCceEEEeecCCcceeeccchhHHhhhccc---cccCCHHHHHHHHHHHHHhcCCeEEEEeeC--CCCc--eE Q lcl|Aclame:pro 61 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRP---NPYMSSMNFFGSLEAQKNLYGNSYANIEFD--RKGK--VQ 133 (432) Q Consensus 61 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~p---n~~~~~~~f~~~~~~~~l~~G~~~~~~~~~--~~g~--~~ 133 (432) .+...|.+++|.|...+++........-+...|. .+ ....++.+++..+ .+.+.+|-+++++++. .+|. +. T Consensus 74 ~Rk~av~~~~w~v~p~~~~~~d~~~ae~v~~~l~-~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~ 151 (448) T protein:vir:77 74 YIFGRIRSAKWYVEPASTDPEDIAIAAFIHAQLG-IDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILD 151 (448) T ss_pred HHHHHHhcCCceEecCCCCHHHHHHHHHHHHHhh-chhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeec Confidence 9999999999999754333221111111112221 12 1223566777776 5789999999999874 3454 34 Q ss_pred EEEEEcCcceEE---EEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 ALWPIDASKVTV---YIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADK 210 (432) Q Consensus 134 ~l~~~~~~~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~ 210 (432) .|.+.++..++. ..++..........+.....+.....+|...++|.++. ..+..+|.|.+..+.-.+.......+ T Consensus 152 ~l~~r~~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~ 230 (448) T protein:vir:77 152 KIVPIHPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALIL 230 (448) T ss_pred cccccCCCccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecC-CcCCcccchHHHHHHHHHHHHHhhHH Confidence 566767654332 22221111111110100011112345788889998754 45678999999999999999999999 Q ss_pred HHHHHHhccCCcceEEEeCCCCC--HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 211 FINNFYKQGLQVKGLVQYVGDLN--EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQ 288 (432) Q Consensus 211 ~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~ 288 (432) +...+.+..|.|--+.+.+...+ +++.+.+.+...+...|. ++ .++++.|++++-+.......++.+..++..++ T Consensus 231 ~w~~f~E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~-~a--~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~ 307 (448) T protein:vir:77 231 LINHGLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKP-RH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAG 307 (448) T ss_pred HHHHHHHHcCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCC-ce--EEEecCCceEEEEecCCCccCHHHHHHHHHHH Confidence 99999999999988888876654 456666666666543442 33 36678888777665544444566788888888 Q ss_pred HHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh-----cch-hhhhhhhhhhhhhhH Q lcl|Aclame:pro 289 IATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL-----DKG-FYSKFNVDAILRADI 362 (432) Q Consensus 289 I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~-----~~~-~~~~fd~~~l~~~d~ 362 (432) |+.+..=. .+=...+.++++.............+.-.++.|++.||+.++.+.-. ... .++.|+ .....|+ T Consensus 308 Isk~iLGq-tlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~--~~e~eDl 384 (448) T protein:vir:77 308 IARALGID-FNTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFE--MEERNDF 384 (448) T ss_pred HHHHHhcc-ccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEec--CCChhhH Confidence 88776432 21111222333333333334556667788889999998877543211 111 244554 4456788 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 363 KTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 363 ~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +..++...+++ +-+|+.+|+|.--++.... .+.+...+.+-.+.+.+......+ T Consensus 385 ~~~a~~~~~l~-------~~~~~~~~ip~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 438 (448) T protein:vir:77 385 SAAANLMGMLI-------NAVKDSEDIPTELKALIDA---------LPSKMRRALGVVDEVREAVRQPAD 438 (448) T ss_pred HHHHHHhHHHH-------HHHHHHhcCCccCCcCCCC---------CchhcccccCCCCCCCchhhcchh Confidence 88888888775 4589999998532211110 111111222222222322222222 No 134 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.63 E-value=1.5e-15 Score=101.83 Aligned_cols=378 Identities=12% Similarity=0.051 Sum_probs=215.9 Q ss_pred CchHHHHHHhc----ccccccccccc----ccCCchHHHHHhhcCC-cCcccccHHHHh-ccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MKIVDSVKKFF----NFEKRQTSQVI----ELNKDDEKLLEWLGIS-PSTISVKGKNAL-KVATVFACIKILSESVSKLP 70 (432) Q Consensus 1 Mg~~~~l~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~g~~-~~~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~~ 70 (432) |++= ++++. +.+........ .....++-+-.. |.. .....+ .+.++ +.+.|.+|+..+...|.+++ T Consensus 1 ~~~~--~~~~p~~~~~~~~~~~~~~~~~~~g~~~~D~~lr~~-gg~~~~~~~l-~~~m~e~D~~v~s~l~~Rk~av~~~~ 76 (446) T protein:vir:98 1 MNME--VRNAPTPAIRRRTIYAMEHLGLATSYLSEDGGYKRA-GKPTYQQLSA-WDEAAQTEPIIAQGLDSIALSVLNKV 76 (446) T ss_pred Cccc--ccCCCchhhhhhhhhccccchhhcccCCcchHhhhc-CCChHHHHHH-HHHHHhcchHHHHHHHHHHHHhhcCC Confidence 4332 11110 00000000000 000111111111 111 001111 24444 48999999999999999999 Q ss_pred eEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC-Cc--eE----EEEEEcCcce Q lcl|Aclame:pro 71 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK-GK--VQ----ALWPIDASKV 143 (432) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~-g~--~~----~l~~~~~~~v 143 (432) |.|...++ + . ..-+...|.... .+.....+.+.+.+|-++.++++... |. +. .+....|..+ T Consensus 77 w~V~p~~~---~-~-a~~v~~~l~~~~------~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~ 145 (446) T protein:vir:98 77 GPYQHGDK---R-I-KKFIDDQLRNRA------KTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQV 145 (446) T ss_pred ceecCccH---H-H-HHHHHHHHhhcC------chhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccc Confidence 99975321 1 1 112333443221 24444557899999999999987532 21 11 1222233333 Q ss_pred EEEEcCccceeccc---------------------eeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHH Q lcl|Aclame:pro 144 TVYIDDVGLLNSKT---------------------KMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTL 202 (432) Q Consensus 144 ~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~ 202 (432) ....+......... .........|....+|...++++++....+..+|.|.+..++-.. T Consensus 146 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~ 225 (446) T protein:vir:98 146 MLIANDNGRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYS 225 (446) T ss_pred eeeeccCCccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHH Confidence 33333221111000 000011123334568999999998877778899999999999999 Q ss_pred HHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH---------HHHHHHHHHHhcc-ccccccee---ecCCCceeeec Q lcl|Aclame:pro 203 ENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK---------KVFRENFESMSSG-LQNSHRIA---LMPVGYQFQPI 269 (432) Q Consensus 203 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g-~~n~g~~~---vl~~g~~~~~~ 269 (432) .......+....+.+..|.|--+.+.+...++++. +...+.+.++... ..+++.++ +++.|++++-+ T Consensus 226 ~fK~~~~~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~ 305 (446) T protein:vir:98 226 IFKRAFRDMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGAL 305 (446) T ss_pred HHHHhhHHHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEee Confidence 99999999999999999999999988776543222 1222344444432 22233332 34888888766 Q ss_pred CCChh-HHHHHHHHHHHHHHHHHHhcCChhhccCccc--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc Q lcl|Aclame:pro 270 SLNMS-DAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK 346 (432) Q Consensus 270 ~~~~~-d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~--~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~ 346 (432) ..... ...+.++.++..++|+.+.......++.... ++++- .+.........++-.+++|++.+|+.++.+--... T Consensus 306 ea~~~~~~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~al-a~vh~~V~~d~~~aDa~~i~~tln~~Li~~l~~lN 384 (446) T protein:vir:98 306 TTGNNFSDSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRA-SEIQLELFDGKINSIFDTVIHAFTEQVIGNLIRLN 384 (446) T ss_pred ccccCChhhHHHHHHHHHHHHHHHHhcccccccccccccchhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 44322 2247788899999999988775555543322 23322 33344556677888899999999887743321100 Q ss_pred -----------hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCH---HHHHHHhCCCCCCCcc Q lcl|Aclame:pro 347 -----------GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKP---NEARSKEDLPPEAGGD 396 (432) Q Consensus 347 -----------~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~---nE~R~~~gl~p~~~gd 396 (432) ..+++|++. ...|++..++...++++.|+.++ +.+|+.+|+|+-...- T Consensus 385 f~~~~~~~~~~~~~~~~~~~--e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~giP~~~~~~ 446 (446) T protein:vir:98 385 FDPALYPLASNTGYITRLPG--RATDLAALVEAIKQMHDMGFLVDGDKDHIRSITGLPDAISST 446 (446) T ss_pred CCccccccccccccceeccC--ChhhHHHHHHHHHHHHhCCccccccHHHHHHHhCcCCCCCCC Confidence 012334333 46788899999999999998765 4599999998753211 No 135 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.61 E-value=6.1e-16 Score=103.98 Aligned_cols=411 Identities=13% Similarity=0.104 Sum_probs=212.9 Q ss_pred CchHH-----------HHHHhccccccccccccccCCchHHHHHhhcCCcCcc----------cccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVD-----------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----------SVKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~v~~~~a~~~~~v~~~i 59 (432) .+-++ +|.+.|.. .....+.......+..++|-|...... ...-....+.|..++|+ T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~ 129 (695) T protein:vir:78 52 LNALDAAPVAEPSPSLRLARQFEV--DVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMH 129 (695) T ss_pred ccccccccccCCCcccccceecee--ccccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHH Confidence 11111 11111110 000000000000001111111111111 11123445788899999 Q ss_pred HHHHHhhccCceEEEeec-C------------CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQED-E------------YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF 126 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~-~------------~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~ 126 (432) ..|++.+..- |.....+ + ++.. ..+......|..+-....-+..|.+ .+.+--++|-+.+++.. T Consensus 130 ~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~-~~d~dqi~~L~~e~erL~V~~~l~e-aik~aRlfGGa~~~i~i 206 (695) T protein:vir:78 130 EVLADECIRT-WGEAIGGTKEKADTSGLAAGGNAAS-TSDGDQLKQINDEIERLRIRDAVRT-TVIHDQAFGRAHPYFKI 206 (695) T ss_pred HHHHHHhhcc-cceeccccchhhhhhcccccccccc-cccHHHHHHHHHHHHHHHHHHHHHH-HHHhhccccceEEEEEe Confidence 9999987665 4221100 0 0000 0011223344444444433344444 44445567776655432 Q ss_pred C-----------------CCCceEEEEEEcCcceEEEEcC----ccceeccceeEEEecccCceEEEccceEEEEecCCC Q lcl|Aclame:pro 127 D-----------------RKGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGIT 185 (432) Q Consensus 127 ~-----------------~~g~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~ 185 (432) . ..|.++.|.+++|.+|++.... -...++...+|+. .| ..|.++.++.|..... T Consensus 207 ~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V---~G--~kIH~SRL~~f~g~pl 281 (695) T protein:vir:78 207 KGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM---IG--TEVHATRLHTIVSRPV 281 (695) T ss_pred ccCccccccccccccccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE---ec--eEEeeeeEEEecCCCc Confidence 2 2356677999999999885422 1112333333322 23 2477777776653221 Q ss_pred ------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH--HHHHHHHhcccccccce Q lcl|Aclame:pro 186 ------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF--RENFESMSSGLQNSHRI 257 (432) Q Consensus 186 ------~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~n~g~~ 257 (432) ...+.|.|..+.+...+............+...-............+.......+ +-++.+++++ | .++ T Consensus 282 Pd~LKp~y~~~GiSv~q~~~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rs--n-~G~ 358 (695) T protein:vir:78 282 GDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD--N-RNI 358 (695) T ss_pred hhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC--c-cce Confidence 2345799999999998888887777777766543222111111111221222222 3344455543 3 345 Q ss_pred eecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc-ccHHHHHHHH-------HHHHHHHHHH Q lcl|Aclame:pro 258 ALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIEQQQQQF-------YTDTLQATLT 328 (432) Q Consensus 258 ~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~-------~~~~l~P~~~ 328 (432) .+++ ...+|++.+.+.+.++ +......+.||.+-+||...|.+.++... ++.+.-.+.| -+.-++|.++ T Consensus 359 ~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~ 436 (695) T protein:vir:78 359 LFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMN 436 (695) T ss_pred EEEecCCcceEEEecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHHH Confidence 6667 4789999987777765 66778889999999999999987666544 2333333333 3456788888 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH-------HHHHhCCCcCHHHHHHHhCCCCCC-------C Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY-------RTGIQGGFLKPNEARSKEDLPPEA-------G 394 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~-------~~~~~~g~~t~nE~R~~~gl~p~~-------~ 394 (432) .+-+.+-+..|... ...+.|.+++|.+++.++++++. ..++..|+++++|+|.++.-+|.- - T Consensus 437 rl~~ii~rS~~G~i----dpdi~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~ 512 (695) T protein:vir:78 437 DVIVMIQLSLFGAV----DPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDA 512 (695) T ss_pred HHHHHHHHHhcCCC----CCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCccccccccc Confidence 88888876666543 23577788999999988877754 456788999999999998877531 1 Q ss_pred cceeeeccccccccccc--cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAG--QAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~--~~~~~gg~~~~~~~~~~~e~~ 432 (432) .|.+-+|....--...+ +....+++. .++.....|+ T Consensus 513 ~d~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~ 550 (695) T protein:vir:78 513 NDDPGVPADDDIDGVLTYVQRLAEGGDT--GAPGGARAGA 550 (695) T ss_pred ccCCCcCccchhhhhHhhhcCccccccc--CCCCCCCCCC Confidence 23332332211000000 011111111 1222233333 No 136 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.60 E-value=9.3e-16 Score=102.98 Aligned_cols=411 Identities=13% Similarity=0.097 Sum_probs=211.9 Q ss_pred Cch-----------HHHHHHhccccccccccccccCCchHHHHHhhcCCcCcc----------cccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKI-----------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----------SVKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~-----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~v~~~~a~~~~~v~~~i 59 (432) ..- --+|...|.... ..-+..........++|-|...... ...-....+.|..++|+ T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~ 128 (694) T protein:vir:10 51 LNALDAAPVAEPSPSLRLARQFEVDV--SNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMH 128 (694) T ss_pred chhhcccccCCCCcchhhhhhccccc--cCCCccccchhhhhhccCcccccchhhhhccCcchHHHHHHHhhccchhhHH Confidence 000 011222221000 0000000000011111111111110 11223445788899999 Q ss_pred HHHHHhhccCceEEEeec-C------------CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQED-E------------YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF 126 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~-~------------~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~ 126 (432) ..|++.+..- |.....+ + ++.. ..+......|..+-....-+..|.+ .+.+--++|-+.+++.. T Consensus 129 ~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~-~~d~dqi~~L~~e~erl~V~~~l~e-aik~aRlfGGa~~~i~I 205 (694) T protein:vir:10 129 EVLADECIRT-WGEAIGGTKEKADTSGLAAGGNAAS-TSDGDQLKQINDEIERLRIRDAVRT-TVIHDQAFGRAHPYFKI 205 (694) T ss_pred HHHHHHhhcc-cceeccccchhhhhhcccccccccc-cccHHHHHHHHHHHHHHHHHHHHHH-HHHhhccccceEEEEEe Confidence 9999987665 4221100 0 0000 0011223344444444433344444 44445567776655432 Q ss_pred C-----------------CCCceEEEEEEcCcceEEEEcC----ccceeccceeEEEecccCceEEEccceEEEEecCCC Q lcl|Aclame:pro 127 D-----------------RKGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGIT 185 (432) Q Consensus 127 ~-----------------~~g~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~ 185 (432) . ..|.++.|.+++|.+|++.... -...++...+|+. .| ..|.++.++.|..... T Consensus 206 ~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V---~G--~~IH~SRL~~f~g~pl 280 (694) T protein:vir:10 206 KGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM---IG--TEVHATRLHTIVSRPV 280 (694) T ss_pred ecCccccccccccccccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE---ec--eEEeeeeEEEecCCCc Confidence 1 2356777999999999885422 1112333333322 23 2477777776653221 Q ss_pred ------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH--HHHHHHHhcccccccce Q lcl|Aclame:pro 186 ------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF--RENFESMSSGLQNSHRI 257 (432) Q Consensus 186 ------~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~n~g~~ 257 (432) ...+.|.|..+.+...+..+.........+...-............+.......+ +-++.+++++ | .++ T Consensus 281 Pd~LKp~y~~~G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rs--n-~G~ 357 (694) T protein:vir:10 281 GDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD--N-RNI 357 (694) T ss_pred hhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC--c-cce Confidence 2345799999999998888887777777766543222111111111221122222 3344455543 3 345 Q ss_pred eecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc-ccHHHHHHHH-------HHHHHHHHHH Q lcl|Aclame:pro 258 ALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIEQQQQQF-------YTDTLQATLT 328 (432) Q Consensus 258 ~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~-------~~~~l~P~~~ 328 (432) .+++ ...+|++.+.+.+.++ +......+.||.+-+||...|.+.++... ++.+.-.+.| -+.-++|.++ T Consensus 358 ~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~ 435 (694) T protein:vir:10 358 LFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMN 435 (694) T ss_pred EEEecCCcceEEEecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHH Confidence 6667 4789999987777765 66778889999999999999987666544 2333333333 3456788888 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH-------HHHHhCCCcCHHHHHHHhCCCCCC-------C Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY-------RTGIQGGFLKPNEARSKEDLPPEA-------G 394 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~-------~~~~~~g~~t~nE~R~~~gl~p~~-------~ 394 (432) .+-+.+-+..|... ...+.|.+++|.+++.++++++. ..++..|+++++|+|.++.-+|.- - T Consensus 436 rl~~ii~rS~~G~i----dp~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~ 511 (694) T protein:vir:10 436 DVIVMIQLSLFGAV----DPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDA 511 (694) T ss_pred HHHHHHHHHhcCCC----CCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCccccccccc Confidence 88888876666543 23577788999999988877754 456788999999999998877531 1 Q ss_pred cceeeeccccccccccc--cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAG--QAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~--~~~~~gg~~~~~~~~~~~e~~ 432 (432) .|.+-++....--...+ +....+++. .++..+.++. T Consensus 512 ~d~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~ 549 (694) T protein:vir:10 512 NDDPGVPADDDIDGVLTYVQRLAEGGDT--GAPGGARAGA 549 (694) T ss_pred ccCCCcCccchhhhhHhhhcCccccccc--CCCCcccccc Confidence 23332222211000000 011111111 1222223333 No 137 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=99.60 E-value=1.4e-16 Score=107.54 Aligned_cols=413 Identities=13% Similarity=0.120 Sum_probs=238.4 Q ss_pred CchHHHHHHhccccccccccccc------------cCCchHHHHHhhcCC-cCcccccHHHHhc-cHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWLGIS-PSTISVKGKNALK-VATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~g~~-~~~~~v~~~~a~~-~~~v~~~i~~ia~~i 66 (432) |.--+ | +..++.++.+.. .......+-...|.+ .+..-...-.++. .+.++..+.+|++.+ T Consensus 1 ma~~~-l----r~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (629) T protein:vir:86 1 MAPTS-L----RIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSA 75 (629) T ss_pred CCccc-e----eeeecCCCCChhhhhhhhhhhhhccccccchhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhh Confidence 44322 1 111111111110 001111111111111 1112222233444 688899999999999 Q ss_pred ccCceEEEeecCCccee----eccch----hHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce------ Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQR----GTKHY----LNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV------ 132 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~----~~~~~----~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~------ 132 (432) |++.+..-+.+.|+-.. ..+++ .......--...+...++++.+..++-+-|++|+++.....|.. T Consensus 76 Sr~rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~ 155 (629) T protein:vir:86 76 SRVRLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNP 155 (629) T ss_pred ceeeeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcc Confidence 99999999988654211 11222 22333333344567889999999999999999998874333322 Q ss_pred -EEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEE-ccceEEEEe--cCCCCCcccccCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 133 -QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVL-KPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASA 208 (432) Q Consensus 133 -~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~ 208 (432) .+.+.+-+..|+-..++ .......|..-+| +..+++ || ++.+....+-.||+.+++..+.-.... T Consensus 156 ~~eW~~vt~~ei~~~~~~----------~~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~l 224 (629) T protein:vir:86 156 VPEWLALTPEEVRASEKK----------TIIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRT 224 (629) T ss_pred hhhheeechHHhhhccCc----------eeeEcCCCCcceeeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHh Confidence 23444555544422221 1122222333333 333433 55 567777889999999999998888888 Q ss_pred HHHHHHHHhccCCcceEEEeCCCCC----------------------HHHHHHHHHHHH----HHhccccc--ccceeec Q lcl|Aclame:pro 209 DKFINNFYKQGLQVKGLVQYVGDLN----------------------EDAKKVFRENFE----SMSSGLQN--SHRIALM 260 (432) Q Consensus 209 ~~~~~~~~~n~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~----~~~~g~~n--~g~~~vl 260 (432) .+...+..+....-.|++.++..++ ....+++.+.+. ..+...+. +--++++ T Consensus 225 t~~i~aaakSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia 304 (629) T protein:vir:86 225 TKTIANASKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFA 304 (629) T ss_pred hhHHHHHHHHHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeE Confidence 8887777777777777776655432 113444555554 44433222 2233443 Q ss_pred C------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 P------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQE 333 (432) Q Consensus 261 ~------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~ 333 (432) . ++++.-.+.....+. .+.+++..++++|..+-|||..|.+. .+.|.-+.-+....-++-.|.|.+..|+++ T Consensus 305 ~~P~E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~A 383 (629) T protein:vir:86 305 AAPGELIKNVTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEA 383 (629) T ss_pred eechHHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHH Confidence 2 345555555555555 46899999999999999999988665 577877777777777888899999999999 Q ss_pred HHHhhccchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc------------ Q lcl|Aclame:pro 334 MTYKLFLDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD------------ 396 (432) Q Consensus 334 l~~~ll~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd------------ 396 (432) |++.+|.+.....| |-++||.+.|.. + -.+.+.+..+++.|.||-...|+.+|+....+-| T Consensus 384 lT~~~Lrp~Le~eGiDp~kYvvW~DaS~Lt~-d-Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~ 461 (629) T protein:vir:86 384 ITNQVLRTVLMREGIDPNAYVVWHDASQLTV-D-PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWAR 461 (629) T ss_pred HHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHH Confidence 99999876655444 678899988742 2 2345667788899999999999999998754433 Q ss_pred -eeeecccc---------------ccccccccccCCCCCCCCCCCC------CCCCCC Q lcl|Aclame:pro 397 -RLLVNGNM---------------LPIDMAGQAYLKGGDTNGEVSK------EGNEGN 432 (432) Q Consensus 397 -~~~~~~n~---------------~~~~~~~~~~~~gg~~~~~~~~------~~~e~~ 432 (432) .+-..-++ .|+....-...+..+.+++.++ ..+|++ T Consensus 462 d~V~~~P~Li~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sga~~~~ep~te~d 519 (629) T protein:vir:86 462 DRVGQDPNLLPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASGASRREEPDTEDD 519 (629) T ss_pred HhhhhCcchhhhhhhhhhhhcccccCccCCCCCccccCCCcccccCCCcCCCCCCCCC Confidence 11000010 1111111000000111111111 111111 No 138 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=99.59 E-value=3.4e-16 Score=105.39 Aligned_cols=421 Identities=13% Similarity=0.119 Sum_probs=244.4 Q ss_pred CchHHHHHHhcccccccccccccc-------CCchHHHHHhhcCC-cCcccccHHHHhc-cHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIEL-------NKDDEKLLEWLGIS-PSTISVKGKNALK-VATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~-~~~~~v~~~~a~~-~~~v~~~i~~ia~~ia~~~~ 71 (432) |.--..|+---+++.......+.. ......+....|.+ .+..-...-.++. .+.++..+.+|++.+|++.+ T Consensus 1 ~~a~~~lr~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~~g~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL 80 (631) T protein:vir:10 1 MAATQSLRLVRRPKGGRPAPSRALTAASQPLPDPSQVFSKSTGISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCRL 80 (631) T ss_pred CCcccceeeeecCCCCCccchhhhhhhhccccchhhhhhhhcCCcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceeee Confidence 543333321101110000001111 11111111111211 1111122233343 48889999999999999999 Q ss_pred EEEeecCCcc------ee-eccc-hhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEe-eCCCC---c-------e Q lcl|Aclame:pro 72 KIYQEDEYGI------QR-GTKH-YLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKG---K-------V 132 (432) Q Consensus 72 ~~~~~~~~~~------~~-~~~~-~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~-~~~~g---~-------~ 132 (432) ..-+.+.|+- ++ ..++ ........-+...+...++++.++.++-+-|++|+++. +.++| + . T Consensus 81 ~as~idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~~ 160 (631) T protein:vir:10 81 VASELDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRTR 160 (631) T ss_pred EeeeeccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCcccccccc Confidence 9999886621 11 1112 23334444567778999999999999999999999863 33322 1 2 Q ss_pred EEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccce-EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEE-ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKF 211 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~ 211 (432) .+++++....|+..-.+. +.. +....+..-......+ ++.+=++.+....+-.||+.+++..+.-.....+. T Consensus 161 ~~W~~vt~~ei~~~~~g~------g~~-v~lp~g~~h~~~~~~D~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~ 233 (631) T protein:vir:10 161 QEWYAVSKEEIKKSNKGS------GTN-IVLPTGEEHEFVKGTDIIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKT 233 (631) T ss_pred cceeeccHHHHhcccCcc------cce-eecCCCCccceecCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhH Confidence 345566655554322121 011 1111111111122223 33343677778889999999999999988888888 Q ss_pred HHHHHhccCCcceEEEeCCCCC---------------------HHHHHHHHHHHH----HHhcccc--cccceeecC--- Q lcl|Aclame:pro 212 INNFYKQGLQVKGLVQYVGDLN---------------------EDAKKVFRENFE----SMSSGLQ--NSHRIALMP--- 261 (432) Q Consensus 212 ~~~~~~n~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~----~~~~g~~--n~g~~~vl~--- 261 (432) ..+..+....-.|++.++..++ .....++.+.+. ..+...+ .+--++++. T Consensus 234 i~aaakSRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~ 313 (631) T protein:vir:10 234 IANASKSRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPG 313 (631) T ss_pred HHHHHHHHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeech Confidence 8887777777788887777543 124555555554 3343322 222334432 Q ss_pred ---CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 262 ---VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYK 337 (432) Q Consensus 262 ---~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ 337 (432) ++++.-.+.....+. .+.+++..++++|..+-|||..|.+. .+.|.-+.-+....-++-.|.|.+..|+++|++. T Consensus 314 E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT~q 392 (631) T protein:vir:10 314 EQIKDVKHIRFDNEITEV-AIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALTDQ 392 (631) T ss_pred HHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhh Confidence 345555555555555 46899999999999999999988665 5778777777777778888999999999999999 Q ss_pred hccchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce--------------- Q lcl|Aclame:pro 338 LFLDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR--------------- 397 (432) Q Consensus 338 ll~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~--------------- 397 (432) +|.+.....| |-++||.+.|.. + -.+.+.+..+++.|.||-...|+.+|+....+-|. T Consensus 393 ~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pdr~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~av~ 470 (631) T protein:vir:10 393 ILRVTLAREGIDPSKYVVWYDPSQLTI-D-PDKSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDAVS 470 (631) T ss_pred HHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHHhh Confidence 9876655544 678899988732 2 23456677888999999999999999987554331 Q ss_pred ---eeecccccccc-------cccc--ccCCCCCCCCCCCCCC--------CCCC Q lcl|Aclame:pro 398 ---LLVNGNMLPID-------MAGQ--AYLKGGDTNGEVSKEG--------NEGN 432 (432) Q Consensus 398 ---~~~~~n~~~~~-------~~~~--~~~~gg~~~~~~~~~~--------~e~~ 432 (432) -++| ++.|+- ..+. ....+|+.+.+++..+ ++++ T Consensus 471 ~dpaLip-~lApl~~~~~~~v~~P~~~a~~~~g~ed~~~~~~~~~g~~epdt~d~ 524 (631) T protein:vir:10 471 KDPTLIP-MLAPLIAGVLKQIEFPQQQAIDSGGNEDTSDADDLDDGEQEPDTEDD 524 (631) T ss_pred cccCcch-hhHHHHHHHhhhccCCCCCCCCCCCCCccccccccccCCCCCCCCCC Confidence 0111 111100 1111 1222222222221111 1111 No 139 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.59 E-value=1.2e-15 Score=102.31 Aligned_cols=411 Identities=13% Similarity=0.106 Sum_probs=210.5 Q ss_pred CchHH-----------HHHHhccccccccccccccCCchHHHHHhhcCCcCcc----------cccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVD-----------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----------SVKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~v~~~~a~~~~~v~~~i 59 (432) .+-++ +|.+.|.. .....+.......+..++|-|...... ...-....+.|..++|+ T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~ 129 (695) T protein:vir:36 52 LNALDAAPVVEPSPSLRLARQFEV--DVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMH 129 (695) T ss_pred ccccccccccCCCcccccceecee--cccccCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHH Confidence 11111 11111110 000000000000001111111111111 11123445788899999 Q ss_pred HHHHHhhccCceEEEeec-------------CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQED-------------EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF 126 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~-------------~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~ 126 (432) ..|++.+..- |.....+ .++.. ..+......|..+-....-+.. +...+.+--++|-+.+++.. T Consensus 130 ~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~-~~d~dqik~L~~e~erL~V~~~-l~eaik~aRlfGGa~~~i~i 206 (695) T protein:vir:36 130 EVLADECIRT-WGEAIGGTKEKADTSGLAAGGNAAS-TSDGDQLKQINDEIERLRIRDA-VRTTVIHDQAFGRAHPYFKI 206 (695) T ss_pred HHHHHHhhcc-cceecccchhhhhhccccccccccc-cCchHHHHHHHHHHHHHHHHHH-HHHHHHhhccccceEEEEEe Confidence 9999987665 4221100 00000 0011122334433333333333 34445555567777655432 Q ss_pred C-----------------CCCceEEEEEEcCcceEEEEcC----ccceeccceeEEEecccCceEEEccceEEEEecCCC Q lcl|Aclame:pro 127 D-----------------RKGKVQALWPIDASKVTVYIDD----VGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGIT 185 (432) Q Consensus 127 ~-----------------~~g~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~ 185 (432) . ..|.++.|.+++|.+|++.... -...++...+|+. .| ..|.++.++.|..... T Consensus 207 ~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V---~G--~kIH~SRL~~f~g~pl 281 (695) T protein:vir:36 207 KGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM---IG--TEVHATRLHTIVSRPV 281 (695) T ss_pred ccCccccccccccccccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE---ec--eEEeeeeEEEecCCCc Confidence 2 2356677999999999885422 1112333333322 23 2477777776653221 Q ss_pred ------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH--HHHHHHHhcccccccce Q lcl|Aclame:pro 186 ------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF--RENFESMSSGLQNSHRI 257 (432) Q Consensus 186 ------~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~n~g~~ 257 (432) ...+.|.|..+.+...+............+...-............+.......+ +-++.+++++ | .++ T Consensus 282 Pd~LKp~y~~~GiSv~q~~~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~aL~~g~~~~l~~R~eli~~~Rs--n-~G~ 358 (695) T protein:vir:36 282 GDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD--N-RNI 358 (695) T ss_pred hhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC--c-cce Confidence 2345799999999988888877777777766543222111111111111111122 3344455543 3 345 Q ss_pred eecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc-ccHHHHHHHH-------HHHHHHHHHH Q lcl|Aclame:pro 258 ALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIEQQQQQF-------YTDTLQATLT 328 (432) Q Consensus 258 ~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~-------~~~~l~P~~~ 328 (432) .+++ ...+|++.+.+.+.++ +......+.||.+-+||...|.+.++... ++.+.-.+.| -+.-++|.++ T Consensus 359 ~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~ 436 (695) T protein:vir:36 359 LFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMN 436 (695) T ss_pred EEEecCCcceEEEecccCCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHH Confidence 6667 4789999987777765 66778889999999999999987666544 2333333333 3456788888 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH-------HHHHhCCCcCHHHHHHHhCCCCCC-------C Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY-------RTGIQGGFLKPNEARSKEDLPPEA-------G 394 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~-------~~~~~~g~~t~nE~R~~~gl~p~~-------~ 394 (432) .+-+.+-+..|... ...+.|.+++|.+++.++++++. ..++..|+++++|+|.++.-+|.- - T Consensus 437 rl~~ii~rS~~G~i----dpdi~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~ 512 (695) T protein:vir:36 437 DVIVMIQLSLFGAV----DPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDA 512 (695) T ss_pred HHHHHHHHHhcCCC----CCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCccccccccc Confidence 88888876666543 23577788999999988877754 456788999999999998877531 1 Q ss_pred cceeeeccccccccccc--cccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNGNMLPIDMAG--QAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~n~~~~~~~~--~~~~~gg~~~~~~~~~~~e~~ 432 (432) .|.+-+|....--...+ +....+++. .++..+.++. T Consensus 513 ~d~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~ 550 (695) T protein:vir:36 513 NDDPGVPADDDIDGVLTYVQRLAEGGDT--GAPGGARAGA 550 (695) T ss_pred ccCCCcCccchhhhhHhhhcCccccccc--CCCCcccccc Confidence 23332222210000000 011111111 1112222222 No 140 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=99.59 E-value=3.1e-16 Score=105.58 Aligned_cols=415 Identities=9% Similarity=0.073 Sum_probs=239.0 Q ss_pred CchHHHHHHhccccccccccccc------------cCCchHHHHHhh-cCCcCcccccHHHHhc-cHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWL-GISPSTISVKGKNALK-VATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-g~~~~~~~v~~~~a~~-~~~v~~~i~~ia~~i 66 (432) |.--+ | +..++.++.+.. .......+-.+. |...+.+-...-.++. .+.++..+.++++.+ T Consensus 1 ma~~~-l----r~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (639) T protein:vir:10 1 MAATS-L----RVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSC 75 (639) T ss_pred CCccc-e----eeeecCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhh Confidence 54331 1 111111111110 011111222222 2111221112223333 488899999999999 Q ss_pred ccCceEEEeecCCccee---------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEe-eCCCCc----- Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQR---------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGK----- 131 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~---------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~-~~~~g~----- 131 (432) |++.+..-+.+.|+-.. ...+++......--...+...++++.+..++-+-|++||..+ +..++- T Consensus 76 sr~rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~ 155 (639) T protein:vir:10 76 SRTTLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLA 155 (639) T ss_pred ceeeeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccc Confidence 99999999888554211 112344444443445567888999999999999999998754 344432 Q ss_pred --eEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccce--EEEEecCCCCCcccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 --VQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEE--ILHFKNGITLDGLVGVPTMEYLKSTLENSAS 207 (432) Q Consensus 132 --~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~ 207 (432) ..+.+.+....|...- ... .-....+|..-+|..+. ++.+=++.+....+-.||+.+++..+.-... T Consensus 156 ~~~~~W~vvs~~Ei~~~~--------~~~-~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~ 226 (639) T protein:vir:10 156 APRARWYAVTREEIKSKA--------GET-AEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIER 226 (639) T ss_pred ccccceeeeeHHHhcccC--------CCe-eEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHH Confidence 1223333333332111 111 11111233333333332 3333357777788999999999999988888 Q ss_pred HHHHHHHHHhccCCcceEEEeCCCCC----H---------------------HHHHHHHHHHH----HHhcccc--cccc Q lcl|Aclame:pro 208 ADKFINNFYKQGLQVKGLVQYVGDLN----E---------------------DAKKVFRENFE----SMSSGLQ--NSHR 256 (432) Q Consensus 208 ~~~~~~~~~~n~~~~~~~~~~~~~~~----~---------------------~~~~~~~~~~~----~~~~g~~--n~g~ 256 (432) ..+...+..+....-.|++.++..++ + ...+.+.+.+. ..+...+ .+-- T Consensus 227 ~t~~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~v 306 (639) T protein:vir:10 227 TTRKIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYI 306 (639) T ss_pred hhhHHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCcccee Confidence 88888777777777777877666542 0 11334444443 3333322 2223 Q ss_pred eeecC------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 257 IALMP------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMY 330 (432) Q Consensus 257 ~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i 330 (432) ++++. ++++.-.+.....+. .+.+++..++++|..+-|||..|.+.++.|.-+.-|....-++-.|.|.+..| T Consensus 307 Piia~~p~E~l~~ikhl~f~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~i 385 (639) T protein:vir:10 307 PLVASVAAEHLEKVQHIKFGNEVTEV-EIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLI 385 (639) T ss_pred eeeEeechHHhcCeeeeeecCchhHH-HHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHH Confidence 34432 344444455544444 46899999999999999999998777888877777777777888999999999 Q ss_pred HHHHHHhhccchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce-------- Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR-------- 397 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~-------- 397 (432) +++|++.+|.+.....| |-++||.+.|.. + -.+.+.+..+++.|.||-.-.|+.+|+....+-|. T Consensus 386 cdAlT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~ 463 (639) T protein:vir:10 386 CQAIYNDILTPLLAREGIDPTKYILWYDASGLTS-D-PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCRE 463 (639) T ss_pred HHHHHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHH Confidence 99999999876655544 678899988742 2 23456677888999999999999999987654331 Q ss_pred -----eeeccc----cccc--------c--ccccccCCCCCCCCCCCC--------CCCCCC Q lcl|Aclame:pro 398 -----LLVNGN----MLPI--------D--MAGQAYLKGGDTNGEVSK--------EGNEGN 432 (432) Q Consensus 398 -----~~~~~n----~~~~--------~--~~~~~~~~gg~~~~~~~~--------~~~e~~ 432 (432) +..+-. +.|+ + .++....++.+..+.+++ +.+|++ T Consensus 464 ~A~~~V~~~P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~~~ePdte~~ 525 (639) T protein:vir:10 464 FAADVVTKNPELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQQREPQTEDE 525 (639) T ss_pred HHHHHhcCCcchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCCCcCCCcccc Confidence 000000 0111 1 011111122222221111 112222 No 141 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=99.59 E-value=3.1e-16 Score=105.58 Aligned_cols=415 Identities=9% Similarity=0.073 Sum_probs=239.0 Q ss_pred CchHHHHHHhccccccccccccc------------cCCchHHHHHhh-cCCcCcccccHHHHhc-cHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWL-GISPSTISVKGKNALK-VATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-g~~~~~~~v~~~~a~~-~~~v~~~i~~ia~~i 66 (432) |.--+ | +..++.++.+.. .......+-.+. |...+.+-...-.++. .+.++..+.++++.+ T Consensus 1 ma~~~-l----r~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (639) T protein:vir:97 1 MAATS-L----RVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSC 75 (639) T ss_pred CCccc-e----eeeecCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhh Confidence 54331 1 111111111110 011111222222 2111221112223333 488899999999999 Q ss_pred ccCceEEEeecCCccee---------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEe-eCCCCc----- Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQR---------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIE-FDRKGK----- 131 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~---------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~-~~~~g~----- 131 (432) |++.+..-+.+.|+-.. ...+++......--...+...++++.+..++-+-|++||..+ +..++- T Consensus 76 sr~rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~ 155 (639) T protein:vir:97 76 SRTTLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLA 155 (639) T ss_pred ceeeeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccc Confidence 99999999888554211 112344444443445567888999999999999999998754 344432 Q ss_pred --eEEEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccce--EEEEecCCCCCcccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 --VQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEE--ILHFKNGITLDGLVGVPTMEYLKSTLENSAS 207 (432) Q Consensus 132 --~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~ 207 (432) ..+.+.+....|...- ... .-....+|..-+|..+. ++.+=++.+....+-.||+.+++..+.-... T Consensus 156 ~~~~~W~vvs~~Ei~~~~--------~~~-~~i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~ 226 (639) T protein:vir:97 156 APRARWYAVTREEIKSKA--------GET-AEISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIER 226 (639) T ss_pred ccccceeeeeHHHhcccC--------CCe-eEeecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHH Confidence 1223333333332111 111 11111233333333332 3333357777788999999999999988888 Q ss_pred HHHHHHHHHhccCCcceEEEeCCCCC----H---------------------HHHHHHHHHHH----HHhcccc--cccc Q lcl|Aclame:pro 208 ADKFINNFYKQGLQVKGLVQYVGDLN----E---------------------DAKKVFRENFE----SMSSGLQ--NSHR 256 (432) Q Consensus 208 ~~~~~~~~~~n~~~~~~~~~~~~~~~----~---------------------~~~~~~~~~~~----~~~~g~~--n~g~ 256 (432) ..+...+..+....-.|++.++..++ + ...+.+.+.+. ..+...+ .+-- T Consensus 227 ~t~~i~aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~v 306 (639) T protein:vir:97 227 TTRKIKNAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYI 306 (639) T ss_pred hhhHHHHHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCcccee Confidence 88888777777777777877666542 0 11334444443 3333322 2223 Q ss_pred eeecC------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 257 IALMP------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMY 330 (432) Q Consensus 257 ~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i 330 (432) ++++. ++++.-.+.....+. .+.+++..++++|..+-|||..|.+.++.|.-+.-|....-++-.|.|.+..| T Consensus 307 Piia~~p~E~l~~ikhl~f~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~i 385 (639) T protein:vir:97 307 PLVASVAAEHLEKVQHIKFGNEVTEV-EIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLI 385 (639) T ss_pred eeeEeechHHhcCeeeeeecCchhHH-HHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHH Confidence 34432 344444455544444 46899999999999999999998777888877777777777888999999999 Q ss_pred HHHHHHhhccchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcce-------- Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDR-------- 397 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~-------- 397 (432) +++|++.+|.+.....| |-++||.+.|.. + -.+.+.+..+++.|.||-.-.|+.+|+....+-|. T Consensus 386 cdAlT~~~Lrp~Le~eGvDp~kYvvW~DaS~Lt~-d-Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~ 463 (639) T protein:vir:97 386 CQAIYNDILTPLLAREGIDPTKYILWYDASGLTS-D-PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCRE 463 (639) T ss_pred HHHHHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHH Confidence 99999999876655544 678899988742 2 23456677888999999999999999987654331 Q ss_pred -----eeeccc----cccc--------c--ccccccCCCCCCCCCCCC--------CCCCCC Q lcl|Aclame:pro 398 -----LLVNGN----MLPI--------D--MAGQAYLKGGDTNGEVSK--------EGNEGN 432 (432) Q Consensus 398 -----~~~~~n----~~~~--------~--~~~~~~~~gg~~~~~~~~--------~~~e~~ 432 (432) +..+-. +.|+ + .++....++.+..+.+++ +.+|++ T Consensus 464 ~A~~~V~~~P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~~~ePdte~~ 525 (639) T protein:vir:97 464 FAADVVTKNPELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQQREPQTEDE 525 (639) T ss_pred HHHHHhcCCcchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCCCcCCCcccc Confidence 000000 0111 1 011111122222221111 112222 No 142 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=99.57 E-value=3.7e-16 Score=105.19 Aligned_cols=413 Identities=13% Similarity=0.117 Sum_probs=238.3 Q ss_pred CchHHHHHHhccccccccccccc------------cCCchHHHHHhhcCC-cCcccccHHHHhc-cHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIE------------LNKDDEKLLEWLGIS-PSTISVKGKNALK-VATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~g~~-~~~~~v~~~~a~~-~~~v~~~i~~ia~~i 66 (432) |.--+ | +..++.++.+.. .......+-...|.+ .+..-...-.++. .+.++..+.+|++++ T Consensus 1 ma~~~-l----r~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~ 75 (629) T protein:vir:99 1 MAPTS-L----RIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSA 75 (629) T ss_pred CCccc-e----eeeecCCCCChhhhhhhhhhhhhcccccchhhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhh Confidence 44322 1 111111111110 001111111111111 1112222233444 688899999999999 Q ss_pred ccCceEEEeecCCccee----eccch----hHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce------ Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQR----GTKHY----LNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV------ 132 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~----~~~~~----~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~------ 132 (432) |++.+..-+.+.|+-.. ..+++ .......--...+...++++.+..++-+-|++|+++.....|.. T Consensus 76 Sr~rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~ 155 (629) T protein:vir:99 76 SRVRLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNP 155 (629) T ss_pred ceeeeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcc Confidence 99999999988654211 11222 22333333344567889999999999999999998874333322 Q ss_pred -EEEEEEcCcceEEEEcCccceeccceeEEEecccCce-EEEccceEEEEe--cCCCCCcccccCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 133 -QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQ-RVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASA 208 (432) Q Consensus 133 -~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~ 208 (432) .+.+.+-+..|+-..++ .......|.. ...+..+++ || ++.+....+-.||+.+++..+.-.... T Consensus 156 ~~eW~~vt~~ei~~~~~~----------~~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~l 224 (629) T protein:vir:99 156 VPEWLALTPEEVRASEKK----------TIIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRT 224 (629) T ss_pred hhhheeechHHhhhccCc----------eeEEcCCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHh Confidence 33444555544422222 1112222222 223334433 44 567777889999999999998888888 Q ss_pred HHHHHHHHhccCCcceEEEeCCCCC----------------------HHHHHHHHHHHH----HHhccccc--ccceeec Q lcl|Aclame:pro 209 DKFINNFYKQGLQVKGLVQYVGDLN----------------------EDAKKVFRENFE----SMSSGLQN--SHRIALM 260 (432) Q Consensus 209 ~~~~~~~~~n~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~----~~~~g~~n--~g~~~vl 260 (432) .+...+..+....-.|++.++..++ ....+++.+.+. ..+...+. +--++++ T Consensus 225 t~~i~aaakSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia 304 (629) T protein:vir:99 225 TKTIANASKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFA 304 (629) T ss_pred hhHHHHHHHHHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeE Confidence 8887777777777777776655432 113444555554 44433222 2233443 Q ss_pred C------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 P------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQE 333 (432) Q Consensus 261 ~------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~ 333 (432) . ++++.-.+.....+. .+.+++..++++|..+-|||..|.+. .+.|.-+.-+....-++-.|.|.+..|+++ T Consensus 305 ~~P~E~i~~i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~A 383 (629) T protein:vir:99 305 AAPGELIKNVTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEA 383 (629) T ss_pred eechHHhcCeeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHH Confidence 2 345555555555555 46899999999999999999988665 577877777777777888899999999999 Q ss_pred HHHhhccchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc------------ Q lcl|Aclame:pro 334 MTYKLFLDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD------------ 396 (432) Q Consensus 334 l~~~ll~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd------------ 396 (432) |++.+|.+.....| |-++||.+.|.. + -.+.+.+..+++.|.||-...|+.+|+....+-| T Consensus 384 lT~~~Lrp~Le~eGiDp~kYvvW~DaS~Lt~-d-Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~ 461 (629) T protein:vir:99 384 ITNQVLRTVLMREGIDPNAYVVWHDASQLTV-D-PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWAR 461 (629) T ss_pred HHhhHHHHHHHHhCCCHHHhEeeecCccccc-C-CCCcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHH Confidence 99999876655444 678899988742 2 2345667788899999999999999998754432 Q ss_pred -eeeecccc---------------ccccccccccCCCCCCCCCCCC------CCCCCC Q lcl|Aclame:pro 397 -RLLVNGNM---------------LPIDMAGQAYLKGGDTNGEVSK------EGNEGN 432 (432) Q Consensus 397 -~~~~~~n~---------------~~~~~~~~~~~~gg~~~~~~~~------~~~e~~ 432 (432) .+-..-++ .|+....-...+..+.+++.++ ..+|++ T Consensus 462 d~V~~~P~Li~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sga~~~~ep~te~d 519 (629) T protein:vir:99 462 DRVGQDPNLLPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASGASRREEPDTEDD 519 (629) T ss_pred HhhhhCcchhhhhhhhhhhhcccccCccCCCCCccccCCCcccccCCCcCCCCCCCCC Confidence 11000010 1111111000000111111111 111111 No 143 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.57 E-value=2.3e-15 Score=100.80 Aligned_cols=413 Identities=13% Similarity=0.111 Sum_probs=212.1 Q ss_pred CchHH-----------HHHHhccccccccccccccCCchHHHHHhhcCCcCcc----------cccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVD-----------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----------SVKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~v~~~~a~~~~~v~~~i 59 (432) .+-++ +|.+.|... ....+.......+..++|-|...... ...-....+.|..++|+ T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~ 129 (698) T protein:vir:10 52 LNALDAAPVAEPSPSLRLARQFEVD--VSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMH 129 (698) T ss_pred ccccccccccCCCccccccccceec--cccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHH Confidence 11111 121222100 00000000000001111111111111 11123445788899999 Q ss_pred HHHHHhhccCceEEEeec-C------------CcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQED-E------------YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF 126 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~-~------------~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~ 126 (432) ..|++.+..- |.....+ + ++.. ..+......|..+-....-+..+.+.+ .+--++|-+.+++.. T Consensus 130 ~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~~~-~~d~dqi~~L~~e~erl~V~~~l~eai-~~aRlfGGa~~~i~I 206 (698) T protein:vir:10 130 EVLADECIRT-WGEAIGGTKEKADTSGLAAGGNAAS-TSDGDQLKQINDEIERLRIRDAVRTTV-IHDQAFGRAHPYFKI 206 (698) T ss_pred HHHHHHhhcc-cceeccccchhhhhhcccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccceEEEEEe Confidence 9999987665 4221100 0 0000 001122334444444443444444444 444556666554432 Q ss_pred C-----------------CCCceEEEEEEcCcceEEEEcC--c--cceeccceeEEEecccCceEEEccceEEEEecCC- Q lcl|Aclame:pro 127 D-----------------RKGKVQALWPIDASKVTVYIDD--V--GLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGI- 184 (432) Q Consensus 127 ~-----------------~~g~~~~l~~~~~~~v~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~- 184 (432) . ..|.++.|.+++|.+|++.... + ...++...+|+ . .|+ .+.++.++.|.... T Consensus 207 ~gdd~~l~~PL~~~~~~I~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~-V--~G~--~IH~SRL~~~vg~pv 281 (698) T protein:vir:10 207 KGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWW-M--IGS--EVHATRLHTIVSRPV 281 (698) T ss_pred ecCccccccccccccccccCccceeeeeecccccccchhhhccchhhccCCCceEE-E--ecc--eecceeEEEecCCCc Confidence 1 2356677999999999885422 1 11223333222 2 232 47777777665321 Q ss_pred -----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH--HHHHHHHhcccccccce Q lcl|Aclame:pro 185 -----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVF--RENFESMSSGLQNSHRI 257 (432) Q Consensus 185 -----~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~n~g~~ 257 (432) +...+.|.|..+.+...+..+.........+...-............++......+ +-++.+++++ |. ++ T Consensus 282 pd~LKp~y~f~G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~~~~l~~dla~aL~~g~~~~l~~R~eli~~~Rs--n~-G~ 358 (698) T protein:vir:10 282 GDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALTPGANVDLSMRAELINRYRD--NR-NI 358 (698) T ss_pred hhhhcchhccCCccHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHhcCChhhHHHHHHHHHHHHhcC--cc-ce Confidence 22345699999999999888887777777766543222221111111222222223 2344455553 43 45 Q ss_pred eecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc-ccHHHHHHHHH-------HHHHHHHHH Q lcl|Aclame:pro 258 ALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL-NNIEQQQQQFY-------TDTLQATLT 328 (432) Q Consensus 258 ~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~-~~~~~~~~~~~-------~~~l~P~~~ 328 (432) .+++ ...+|++.+.+.+.++ +......+.||.+-+||...|.+.++... ++.+.-.+.|| +.-|+|.++ T Consensus 359 ~llDk~~Eefeq~st~lSGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~ 436 (698) T protein:vir:10 359 LFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMN 436 (698) T ss_pred EEEecCCcceEEEecCcCCHH--HHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHH Confidence 6667 5789999988777766 66778889999999999999987666544 23333333333 446788888 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHH-------HHHHhCCCcCHHHHHHHhCCCCCC-------C Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAY-------RTGIQGGFLKPNEARSKEDLPPEA-------G 394 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~-------~~~~~~g~~t~nE~R~~~gl~p~~-------~ 394 (432) .+-+.|-+..|... ...+.|.+++|.+++.++++++. ..++..|+++++|+|.++.-+|.- - T Consensus 437 rl~~ii~rS~~G~i----dp~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~d~ 512 (698) T protein:vir:10 437 DVIVMIQLSLFGAV----DPSIKWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDA 512 (698) T ss_pred HHHHHHHHHhcCCC----CCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccccccCC Confidence 88888876665543 23577788999999988887764 446678999999999998666531 1 Q ss_pred cceeeecc-cccccccccc-ccCCCCC-CCCCCCCCCCCCC Q lcl|Aclame:pro 395 GDRLLVNG-NMLPIDMAGQ-AYLKGGD-TNGEVSKEGNEGN 432 (432) Q Consensus 395 gd~~~~~~-n~~~~~~~~~-~~~~gg~-~~~~~~~~~~e~~ 432 (432) -|++..|. |..+.....- ....||+ ...+.+.-+-+|+ T Consensus 513 ~d~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (698) T protein:vir:10 513 NDDPGAPADDDIDGVLTYVQRMAEGGDTGAPTAPGGARAGA 553 (698) T ss_pred cccCCCCCCCcchHHHhhhcCCcCCCCcccccccccccCCC Confidence 22232222 1111111100 1111111 1112222222333 No 144 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=99.55 E-value=2.4e-15 Score=100.74 Aligned_cols=415 Identities=11% Similarity=0.068 Sum_probs=236.5 Q ss_pred CchHHHHHHhccccccccccc------cccCC--chHHHHH-hhcCC-cCcccccHHHHhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQV------IELNK--DDEKLLE-WLGIS-PSTISVKGKNALK-VATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~------~~~~~--~~~~~~~-~~g~~-~~~~~v~~~~a~~-~~~v~~~i~~ia~~ia~~ 69 (432) |.--+ | +..++.+... ..... ....+.. ..|.. ...+-...-.++. .+.++..+.++++.+|++ T Consensus 1 ma~~~-l----rv~rrpk~~p~~r~l~aasqp~~P~~~~~~~~~g~~~~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~ 75 (629) T protein:vir:10 1 MAAST-L----RVSRRPKGSPARRSLTAASQPMEPGRTPSRQVAGTVVRTSWQNEAWECMDLVGELRYYVGWRASSCSRV 75 (629) T ss_pred CCccc-e----eEEecCCCccceeeeccccCCCCcchhhchhhhhhhhhhhhhHHHHHHHHhhhhHHHHhhhhhhhheee Confidence 43221 1 1111111110 00000 0111100 11111 1111111223333 477888899999999999 Q ss_pred ceEEEeecCCcce----eeccchhHHh----hhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce----E-EEE Q lcl|Aclame:pro 70 PLKIYQEDEYGIQ----RGTKHYLNNL----LRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV----Q-ALW 136 (432) Q Consensus 70 ~~~~~~~~~~~~~----~~~~~~~~~l----L~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~----~-~l~ 136 (432) .+..-+.+.|+-. ...+||.... +..--...+...++++.+..++-+-|+.|++++....+.+ + +.+ T Consensus 76 rL~as~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W~ 155 (629) T protein:vir:10 76 ELIASELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNWY 155 (629) T ss_pred eEEEeeecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCccccccee Confidence 9999988865421 1224444332 3334455578889999999999999999998775444422 2 233 Q ss_pred EEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEe--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 137 PIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINN 214 (432) Q Consensus 137 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 214 (432) .+....|.. ...........+|..-+|..+.=+.|| ++.+.....-.||+.+++..+.-.....+...+ T Consensus 156 vVt~~Ei~~---------kg~g~~~i~lpdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~ 226 (629) T protein:vir:10 156 VVTNDEVKN---------KGAGKTDIELPDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRN 226 (629) T ss_pred eecHHHhcc---------ccCceeEEEcCCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHH Confidence 333333221 111112233344554555444333334 567777788999999999998888888887777 Q ss_pred HHhccCCcceEEEeCCCCC----------------------HHHHHHHHHHHH----HHhccccc--ccceeecC----- Q lcl|Aclame:pro 215 FYKQGLQVKGLVQYVGDLN----------------------EDAKKVFRENFE----SMSSGLQN--SHRIALMP----- 261 (432) Q Consensus 215 ~~~n~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~----~~~~g~~n--~g~~~vl~----- 261 (432) ..+....-.|++.++..++ ....+.+.+.+. ..+...+. +--++++. T Consensus 227 aakSRL~gnGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~ 306 (629) T protein:vir:10 227 ASKSRLIGNGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEH 306 (629) T ss_pred HHHhHHhhCceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHH Confidence 7777777777776655432 013344444443 33333222 22233332 Q ss_pred -CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 262 -VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLF 339 (432) Q Consensus 262 -~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll 339 (432) ++++.-.+.....+. -+.+++..++++|..+-|||..|.+. .+.|.-+.-|....-++-.|.|.+..|++++++.+| T Consensus 307 l~~ikhLkf~~eite~-~iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~L 385 (629) T protein:vir:10 307 LQKIFHLKIGNEITEV-EIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVL 385 (629) T ss_pred hcCeeeeeecCchhHH-HHhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHH Confidence 344444455555555 46899999999999999999988665 577877777777777788899999999999999988 Q ss_pred cchhhcch-----hhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcc--ee-----------eec Q lcl|Aclame:pro 340 LDSELDKG-----FYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD--RL-----------LVN 401 (432) Q Consensus 340 ~~~~~~~~-----~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd--~~-----------~~~ 401 (432) .+....+| |-++||.+.|.. |. .+.+.+..+...|.||-...|+.+|+...++-| .+ ..+ T Consensus 386 rp~L~~eGiDp~~Yvvw~DaS~Lt~-dP-d~~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~ 463 (629) T protein:vir:10 386 VATLRAEGIDPDRYVLWYDASGLTV-DP-DKTDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVAD 463 (629) T ss_pred HHHHHHhCCCHHHhEeeecCccccc-CC-CCcHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCC Confidence 76555444 678899888732 22 245667778899999999999999998654422 11 000 Q ss_pred cc----cccc----------cccccccCCCCCCCCCCCC--CCCCC----C Q lcl|Aclame:pro 402 GN----MLPI----------DMAGQAYLKGGDTNGEVSK--EGNEG----N 432 (432) Q Consensus 402 ~n----~~~~----------~~~~~~~~~gg~~~~~~~~--~~~e~----~ 432 (432) -. +.|+ ..+......+++.++++++ .++|+ + T Consensus 464 P~Li~~~apll~~~l~~i~~P~p~~a~~~~~~~~~~~E~~~~~~e~~~e~d 514 (629) T protein:vir:10 464 PSLIKVLAPLLTDELAEIDWPEPPAALPPGEDDQADEEQDTTGSEPSTEDD 514 (629) T ss_pred CchhhhhhhhcCCccccccccCCCCcCCCCCcccCccccCCCCCCcCCCcc Confidence 00 1111 1111122222222222111 11111 1 No 145 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.52 E-value=4e-14 Score=94.01 Aligned_cols=374 Identities=11% Similarity=0.112 Sum_probs=179.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccH---HHHh-ccHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKG---KNAL-KVATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~---~~a~-~~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) ||+.+-+.+. +. ..+....-+|-. ..++. ..+| +++.+..+|+.+++.+-.--..+... T Consensus 23 d~l~~~~~gl-g~-------------~r~~~~~~~g~~---~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~~~i~~g 85 (449) T protein:vir:10 23 MGLMVPTMGL-DN-------------KRHSAWCEYGFP---ELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTNPEIIEG 85 (449) T ss_pred HHHHHHHhcC-Cc-------------ccchhhhhcCCc---ccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcCcccccC Confidence 2322211110 00 000111111111 12222 2233 46788999999998652221112211 Q ss_pred cCCcceeeccchhHHhhhccccccCCHHHHHHH---HHHHHHhcCCeEEEEe-eCCC---------CceEEEEEEcCcce Q lcl|Aclame:pro 77 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGS---LEAQKNLYGNSYANIE-FDRK---------GKVQALWPIDASKV 143 (432) Q Consensus 77 ~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~---~~~~~l~~G~~~~~~~-~~~~---------g~~~~l~~~~~~~v 143 (432) .+ ..+......+...+ .+-+. ..+|.. ....-.++|-+++++. .++. +.+..+.|+....+ T Consensus 86 ~~-~~~~~~~~~~e~~~-~~l~~----~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~~~~i 159 (449) T protein:vir:10 86 DD-ADDSEDETSWEKKS-KQVFT----NRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSWAGSL 159 (449) T ss_pred cc-ccchhhhHHHHHHH-HHHHH----HHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEeeccccC Confidence 11 10000000111111 11111 133333 2333456787777653 2222 24556666665544 Q ss_pred EEE---EcCccceeccceeEEEec--c--cCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHH-HHHHHH Q lcl|Aclame:pro 144 TVY---IDDVGLLNSKTKMWYVVN--T--GGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASAD-KFINNF 215 (432) Q Consensus 144 ~~~---~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~-~~~~~~ 215 (432) ++. .|.....++....|.... . ....+.+.++.|+||... +..|.|.++.++..+.....+. -+...+ T Consensus 160 ~~~~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~----~~~g~~~L~~~yn~l~~~~~~~~~~a~~~ 235 (449) T protein:vir:10 160 KVAEWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGDY----SEDAIGFLEPAYNAFVSLEKVEGGSGESF 235 (449) T ss_pred ChhhhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecCC----CCCChhHHHHHHHHhhhHHHhhhhHHHHH Confidence 432 111122223333332111 1 123356899999998522 2347888888776553333322 122222 Q ss_pred HhccCC-----------cceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHH Q lcl|Aclame:pro 216 YKQGLQ-----------VKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTEL 284 (432) Q Consensus 216 ~~n~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~ 284 (432) +++..+ ..+.........++..+++........+|. + .+.++.+-+|++++.++.+.. +.... T Consensus 236 l~~~~rq~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~---~-~~~i~~~~d~~~~~~~~sgl~--d~l~~ 309 (449) T protein:vir:10 236 LKNAARQLNVNFEKEIDFTNLASLYGVSIDELQDKFNEVAGEINRGN---D-VLMTTQGATVTPLVTSVADPT--ATYNV 309 (449) T ss_pred HHHHHHHHhhhhhhhhhhhhhhHHhhCCchHHHHHHHHHHHHHhccc---h-heeecCCcceEEEecccCChh--HHHHH Confidence 222111 111111111223334445555554444432 2 345567778999888888765 66778 Q ss_pred HHHHHHHHhcCChhhccCccccccccHHHHHHHHHH------HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhh Q lcl|Aclame:pro 285 TIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYT------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAIL 358 (432) Q Consensus 285 ~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~ 358 (432) ...+||.+-+||...|.+.+.+..+..++. +.|+. .-+.|.++.+.+.|-+.-+.... . .+.|.+++|. T Consensus 310 ~~q~iaaa~~IP~t~L~Gqsp~glnst~D~-~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~~--~--d~~i~f~pL~ 384 (449) T protein:vir:10 310 NLQTAAAGVDIPTRILIGNQQAERSSTEDQ-KYFNARCQSRRVDLSFEIEDFCDKLIELKIIDAV--A--KKAVIWDDLN 384 (449) T ss_pred HHHHHHHHhCCCeeeeeccCccccccchhH-HHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCC--C--ceeEEeCCCC Confidence 888999999999999987766544444432 23332 23667777777776554443321 2 3556668999 Q ss_pred hhhHHHHHHHH-------HHHHhCC---CcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 359 RADIKTRYEAY-------RTGIQGG---FLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 359 ~~d~~~~~~~~-------~~~~~~g---~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~ 428 (432) .++.+++++.. .+++++| +++.+|+|+.+|++|..+.+ + +.+ +.++.+++ T Consensus 385 ~~t~kEkAei~k~~A~a~~~~~~ag~~~~~~~~EiR~~~~~~~~~~~~-~-------~~e------------~~de~~~~ 444 (449) T protein:vir:10 385 EQTGTEKLTNAKTMGEINQTMLGSGDNPAFSREEIRTAAGYDNDDEEP-L-------GEE------------DGDEEDKA 444 (449) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccCCcCHHHHHHHhcccCCCCCC-C-------CCC------------CCcccccc Confidence 99998886644 4566666 89999999999999854211 0 000 00000111 Q ss_pred CCCC Q lcl|Aclame:pro 429 NEGN 432 (432) Q Consensus 429 ~e~~ 432 (432) .+.. T Consensus 445 ~d~~ 448 (449) T protein:vir:10 445 TDSA 448 (449) T ss_pred CCcC Confidence 1111 No 146 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.42 E-value=1.2e-12 Score=85.92 Aligned_cols=302 Identities=12% Similarity=0.030 Sum_probs=168.4 Q ss_pred EEEEeeCCC-C--ceEEEEEEcCcceEE-EEcCccceeccceeEEEec-ccCceEEEccceEEEEecCCCCCcccccCHH Q lcl|Aclame:pro 121 YANIEFDRK-G--KVQALWPIDASKVTV-YIDDVGLLNSKTKMWYVVN-TGGQQRVLKPEEILHFKNGITLDGLVGVPTM 195 (432) Q Consensus 121 ~~~~~~~~~-g--~~~~l~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~ 195 (432) +.++++... | .+..|.+.++.++.. ..+.+.. ........ .++....+++...|++++....+..+|.|.+ T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~----l~~~~~~~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLl 76 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGG----LVAIEQWGVFGKATVRIPVDRLVVFVNEREGANWLGQSLL 76 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCc----eeEEEecCCCCCCcceeccCCEEEEEeCCCCCCccchhhH Confidence 667766543 3 356788888876553 2222211 11111121 2334467888888877766667778999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC--CCCH-----------HHHHHHHHHHHHHhcccccccceeecCC Q lcl|Aclame:pro 196 EYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG--DLNE-----------DAKKVFRENFESMSSGLQNSHRIALMPV 262 (432) Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~-----------~~~~~~~~~~~~~~~g~~n~g~~~vl~~ 262 (432) ..++-.+.......++...+.+..+.+--+...+. ..++ +..+.+.........|. + ..++++. T Consensus 77 r~~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g~-~--a~~iip~ 153 (355) T protein:vir:78 77 RQAYKNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAGE-A--AGGYIPH 153 (355) T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCCc-c--eeEeecC Confidence 99999999999999999999998754444444432 2211 12222222222222232 2 3577888 Q ss_pred CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 263 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLD 341 (432) Q Consensus 263 g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~-~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~ 341 (432) |++++-+.......++.++.++..++|+.++.-.-......+. ++++ ..+.........+.-.++.|++.||+.++.. T Consensus 154 g~~ie~~ea~g~~~~~~~~i~~~d~~Isk~iLGqtlTs~~~~~gGS~A-lg~vh~~v~~~~~~aD~~~i~~~ln~~li~~ 232 (355) T protein:vir:78 154 GANFTLTGVQGKLPEMDGPIRYHDEQIARAVLAHFLTLGGDKSTGSYA-LGDTFASFFTGSLNAVMKHIADVTQQHVVED 232 (355) T ss_pred CceEEEeecCCCcccHHHHHHHHHHHHHHHHhhhhhccccCCccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 8888877655555567788889999998876443222211111 2222 2334456667777888888888888766543 Q ss_pred hhh----cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHH-----HHHHHhCCCCCCCcceeeecccc-ccccccc Q lcl|Aclame:pro 342 SEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPN-----EARSKEDLPPEAGGDRLLVNGNM-LPIDMAG 411 (432) Q Consensus 342 ~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~n-----E~R~~~gl~p~~~gd~~~~~~n~-~~~~~~~ 411 (432) .-. ....+..|.++... .+.+..++...+++..|+.-++ .+|+.+|+|.-+.++....+... .+... . T Consensus 233 l~~lN~~~~~~~P~~~~~~~~-~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~gip~p~~~~~~~~~~~~~~~~~~-~ 310 (355) T protein:vir:78 233 LVDQNWGPEEPAPRLVPAQLG-KEQPVTAEAIRALVECGAFTADPELEKDLRARYGLPAPAERDDGADAAAAKAAGRR-R 310 (355) T ss_pred HHHhcCCCCCCCCEEEecCcC-hhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCCcccCCccccccccc-c Confidence 211 11112223333333 3556779999999999987654 47999999866555544332221 11111 0 Q ss_pred cccCCCCCCCCCCCCC--CCCCC Q lcl|Aclame:pro 412 QAYLKGGDTNGEVSKE--GNEGN 432 (432) Q Consensus 412 ~~~~~gg~~~~~~~~~--~~e~~ 432 (432) .....+.....+.+.. ..++. T Consensus 311 ~~~~~~~~~~~~~~a~~~~a~~~ 333 (355) T protein:vir:78 311 AKRLPGQRQGAALPSRSPRADPP 333 (355) T ss_pred ccccCCccccccccccCCCCCCh Confidence 1111111111111111 11111 No 147 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=99.15 E-value=2.2e-10 Score=73.57 Aligned_cols=409 Identities=11% Similarity=0.072 Sum_probs=185.7 Q ss_pred CchHHHHHHhcccccc-----ccc-----cccccCCch-HH---HHHhhcCCcCcccc---c----HHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR-----QTS-----QVIELNKDD-EK---LLEWLGISPSTISV---K----GKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~-----~~~-----~~~~~~~~~-~~---~~~~~g~~~~~~~v---~----~~~a~~~~~v~~~i 59 (432) ||||++||++|..... ... ..+..+... .. +..|+......... . .+..+.......+. T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w~~~Y~g~~~~~~~~~~~~~~~~~~~~sl~~~~~i~ 80 (517) T protein:vir:98 1 MKVIQRIKNFFKRGGYALSGQTLKSINDHEKINIDPNELARIERNLRQYEGDYPQVEYINSQGKIQERDYMTLNLRKLSA 80 (517) T ss_pred CchHHHHHHHHHHHHHHhcccchhHhhcCCceecCHHHHHHHHHHHHHhcCCCcccccccccccccccceeecCcHHHHH Confidence 9999999998842211 100 111111111 11 22333322222110 0 01112223344445 Q ss_pred HHHHHhhccCceEEEeecCCccee--eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEE Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQR--GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWP 137 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~--~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~ 137 (432) ..+|+-+..-+..+.-.+.+..+. .........|+ +--..-.....++..+.+.+..|.+++.+..+..+ ..+.. T Consensus 81 ~~~A~Ll~~e~~~i~v~d~~~~~~~~~~~~~~~e~l~-~i~~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~~~--~~I~~ 157 (517) T protein:vir:98 81 DVLSGLVFNEQCEVYVSDAKDEEKKDNSFKTAHEFIQ-HVFQHNKFIKNLSDYLEPTFALGGLTVRPYVDNGE--IEFSW 157 (517) T ss_pred HHhhhhhcCCcceEEecccccccccccchhHHHHHHH-HHHHhccHHHHHHHHHHHHhhhCCEEEEEEEeCCe--eEEEE Confidence 555555544333333322222111 11112222232 11112233455666788888899999988776432 22444 Q ss_pred EcCcceEEEEc-Cccce-----------------eccc-----------------eeEEEeccc-----CceE------- Q lcl|Aclame:pro 138 IDASKVTVYID-DVGLL-----------------NSKT-----------------KMWYVVNTG-----GQQR------- 170 (432) Q Consensus 138 ~~~~~v~~~~~-~~~~~-----------------~~~~-----------------~~~~~~~~~-----~~~~------- 170 (432) +++..+-+... ..+.. .+.. .....+..+ |..+ T Consensus 158 v~ad~~~Pl~~~~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~~v~L~~~~e 237 (517) T protein:vir:98 158 ALANAFYPLRSNSNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGKRIPLEELYE 237 (517) T ss_pred EcCCeeEEEEecCCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCcccccccccccccc Confidence 55555433111 11100 0000 000001100 1111 Q ss_pred ------EEcc---ceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE-----eCCCC Q lcl|Aclame:pro 171 ------VLKP---EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDL 232 (432) Q Consensus 171 ------~~~~---~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-----~~~~~ 232 (432) .++. --+.|++.+-+. +..+|.|.+..+...+...+........-++.|-. ..++. .+... T Consensus 238 ~l~~~~~~~g~~~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~-~i~vp~~~l~~~~~~ 316 (517) T protein:vir:98 238 GMQEKTYIQGLSRPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQR-TVFVSDVMLRTVPDE 316 (517) T ss_pred CCCcceeECCCCcceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCc-ceecChhhhccccCC Confidence 1110 013356543222 34679999998888888777766666666666433 32221 11110 Q ss_pred C---H-HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc Q lcl|Aclame:pro 233 N---E-DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL 308 (432) Q Consensus 233 ~---~-~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~ 308 (432) . + .-.+.-. ..|.+.. .-.++-.++.++....+-++.+..+...++|+...|+++..++....+.. T Consensus 317 ~g~~~~~~~d~~~----~~y~~~~------~~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~~~~~~k 386 (517) T protein:vir:98 317 SGMPPPQVFDPDV----NVYKSIR------MGTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSFDGRSMK 386 (517) T ss_pred CCcccCCCCCccc----ceeeecc------CCCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCcccccccccccc Confidence 0 0 0000000 0011000 00123346667777777889999999999999999999999987655443 Q ss_pred ccHHHH--HHHHHHHHHHHHHHHHHHHHHHhh-----------ccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 309 NNIEQQ--QQQFYTDTLQATLTMYEQEMTYKL-----------FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 375 (432) Q Consensus 309 ~~~~~~--~~~~~~~~l~P~~~~i~~~l~~~l-----------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 375 (432) ++.+. .+.-.-.++.-+...++..|..-+ +..........+.+++++-...|.++.++...+++.+ T Consensus 387 -TATEi~s~~~~~~~t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~~~v~a 465 (517) T protein:vir:98 387 -TATEIVSENDLTYRTRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYGQAKTF 465 (517) T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHHHHHhc Confidence 33222 111222233333333333332211 1122223345567777888889999999999999999 Q ss_pred CCcCHHHHHHH-hCCCCCCCcceee--eccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 376 GFLKPNEARSK-EDLPPEAGGDRLL--VNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 376 g~~t~nE~R~~-~gl~p~~~gd~~~--~~~n~~~~~~~~~~~~~gg~~~~~~~ 425 (432) |+|++-+++.+ .|+... ..++-+ +.......+..+......+...++++ T Consensus 466 G~ms~~~~i~~~~g~~ee-eA~~e~~~i~~E~~~~~~~~~~~~~~~~~~gd~e 517 (517) T protein:vir:98 466 GFIPTVEAIQRIFKVPKK-TAEQWLEEIRKDQIELDPVTISQRAQKRMFGDEE 517 (517) T ss_pred CCCCHHHHHHHhCCCChH-HHHHHHHHHHHhccccCCCCccccccCCCCCCCC Confidence 99999997655 477532 111110 00000011100111111111111111 No 148 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=99.07 E-value=1.3e-09 Score=69.37 Aligned_cols=398 Identities=13% Similarity=0.097 Sum_probs=190.8 Q ss_pred CchHHHHHHhcccccccc--cc---------ccccCCch-H---HHHHhhcCCcCcccc-------cHHHHhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQT--SQ---------VIELNKDD-E---KLLEWLGISPSTISV-------KGKNALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~--~~---------~~~~~~~~-~---~~~~~~g~~~~~~~v-------~~~~a~~~~~v~~~ 58 (432) ||||++|++++....... .+ .+..+... . ....|+........- -.+..........+ T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~i~d~~~i~~~~~~~~~i~~~~~~Y~g~~~~l~~~~~~~~~~~~~~~slnl~~~i 80 (505) T protein:vir:79 1 MAFWDTLKNLFRKGSAAVGMTKSLGQIIDDPRINLPADEVERIARDKRYYMDDFKQVTHKNSYGDTQKHELQSVNVTKLA 80 (505) T ss_pred CchHHHHHHHHHHhhhhhcchhhhhhhhcccCCCCCHHHHHHHHHHHHHhcCCCccccccccCCCccccceeecchHHHH Confidence 999999999886432211 00 11111111 1 112233222111110 01111223445666 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..|+-+..-|..+.-.+ .+....|+ +-...-.....++..+.+.+..|.+++.+..+. |. ..+..+ T Consensus 81 ~~~~A~ll~~e~~~i~~~d---------~~~~e~l~-~i~~~n~f~~~~~~~~e~a~a~G~~~~k~~~D~-~~-~~i~~v 148 (505) T protein:vir:79 81 SAKLASLIFNEQCQVTVSD---------ETANDFLD-DVFQQNDFYTTFEEKLEEWIALGSGCVRPYVDS-GK-IKLAWA 148 (505) T ss_pred HHHHHhhhcCCCceeecCC---------hHHHHHHH-HHHHhccHHHHHHHHHHHHhhcCCeEEEEEEeC-Cc-eEEEEE Confidence 6777777665555543221 12222232 111112235566778888899999999887763 33 234455 Q ss_pred cCcceEEEE-cCcccee-----------------ccce------------eEEEecc-c----CceE------------- Q lcl|Aclame:pro 139 DASKVTVYI-DDVGLLN-----------------SKTK------------MWYVVNT-G----GQQR------------- 170 (432) Q Consensus 139 ~~~~v~~~~-~~~~~~~-----------------~~~~------------~~~~~~~-~----~~~~------------- 170 (432) +|..+-+.. +...... ++.. .+..+.. + |..+ T Consensus 149 ~ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~ 228 (505) T protein:vir:79 149 TADQVYPLQADTNQVNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEP 228 (505) T ss_pred cCCeeEEEEEcCCCeEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCc Confidence 666554432 2211100 0000 0000000 0 1100 Q ss_pred --E---EccceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE-----EeCCCCCHHH Q lcl|Aclame:pro 171 --V---LKPEEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV-----QYVGDLNEDA 236 (432) Q Consensus 171 --~---~~~~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-----~~~~~~~~~~ 236 (432) . ++.--+.||+.+.+. ....|.|.+.-+...++..+........-++.|-. ..++ ........+. T Consensus 229 ~~~~~g~~~p~f~~~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~-~i~v~~~~l~~~~~~~~~~ 307 (505) T protein:vir:79 229 QVKITGLKHPLFAFYRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQR-RLIVPAEWLKTGSSYGGQA 307 (505) T ss_pred ceeecCCCcceEEEecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhccc-ceeechHHhcccCCCCccc Confidence 0 011124566643222 23579999999988888777776666666765433 3232 1111111110 Q ss_pred HHHHHHHHH---HHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 237 KKVFRENFE---SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 237 ~~~~~~~~~---~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) .......+. ..|.+. ..-+++..++.++....+-++.+..+...++|+...|+++..++....+.. +..+ T Consensus 308 ~~~~~~~fd~~~~~y~~~------~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~-TAte 380 (505) T protein:vir:79 308 SETHPPMFDPDETVYQAM------YGDASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQ-TATE 380 (505) T ss_pred ccccccCCCccceeeeec------cCCCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccc-hHHH Confidence 000000000 001110 001223457777777778888999999999999999999999986555432 2222 Q ss_pred H-------------HHHHHHHHHHHHHHHHHHHHHHhhccch------hhcchhhhhhhhhhhhhhhHHHHHHHHHHHHh Q lcl|Aclame:pro 314 Q-------------QQQFYTDTLQATLTMYEQEMTYKLFLDS------ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQ 374 (432) Q Consensus 314 ~-------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~------~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~ 374 (432) . ....++.+|..++..|........+... .....+.+.|++++-...|..+.++...+++. T Consensus 381 i~s~~~~l~~t~~~~~~~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~ 460 (505) T protein:vir:79 381 VVTNNSQTYQTRSSYITQVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQ 460 (505) T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHH Confidence 1 1223344444444444332211111111 01122456677777778899999999999999 Q ss_pred CCCcCHHHHHHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 375 GGFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 375 ~g~~t~nE~R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) +|+|+..+++..+ |++.. ..++ -+..+.. .......+..+-++| T Consensus 461 ~Gi~s~e~~l~~~~~~~ee-ea~~-----el~ri~~------E~~~~~p~~~~~gg~ 505 (505) T protein:vir:79 461 AQVMPKKQFLMRNYGLDEE-EADE-----WLAQIDA------ENSTAEPEFNQFGGD 505 (505) T ss_pred cCCCCHHHHHHhcCCCChH-HHHH-----HHHHHHH------hccccCCCchhccCC Confidence 9999999887664 54431 1110 1111110 001111222333333 No 149 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=99.06 E-value=3.7e-10 Score=72.28 Aligned_cols=364 Identities=8% Similarity=-0.083 Sum_probs=173.4 Q ss_pred cccccHHHHh-------ccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHH Q lcl|Aclame:pro 41 TISVKGKNAL-------KVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQ 113 (432) Q Consensus 41 ~~~v~~~~a~-------~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~ 113 (432) ..+.+....+ ......-+|+.+++.+---.|.+ .++. ....+..++. + |. .......++.+ T Consensus 1 ~l~~~~~~~~~~~~~~~v~n~~~~ivd~~~~~l~~~gf~~----~d~~---~~~~~~~i~~-~-N~---~d~~~~~~~~~ 68 (434) T protein:vir:98 1 MLPKNAEQAFLDFQRKARTNFCGLIANASVHRLLALGVTG----PDGE---PDTRASRWWQ-A-NR---LDSRQKLVWRM 68 (434) T ss_pred CCCCCccHHHHHhhhhhhccchHHHHHHHHhhhccCceec----CCCc---hHHHHHHHHH-h-cC---hhHHHHHHHHH Confidence 1111111111 12344556666666443333332 1111 1123333332 2 32 33566678899 Q ss_pred HHhcCCeEEEEeeCCCCce------EEEEEEcCcceEEEEcCccceeccceeEEEecccCceE----------------- Q lcl|Aclame:pro 114 KNLYGNSYANIEFDRKGKV------QALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQR----------------- 170 (432) Q Consensus 114 ~l~~G~~~~~~~~~~~g~~------~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 170 (432) ++.+|.+|+.+.++..+.. ..+.+++|..+.++.|...........++....++... T Consensus 69 a~i~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (434) T protein:vir:98 69 AMAQSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTRER 148 (434) T ss_pred HhhcCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEeec Confidence 9999999999887654432 23667899988888765321111111111111111100 Q ss_pred ------------------------EEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE Q lcl|Aclame:pro 171 ------------------------VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV 226 (432) Q Consensus 171 ------------------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 226 (432) .+..=-|++|+++...+. .|.|-++.....++....+.-......+-.+.|..++ T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~~-~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~i 227 (434) T protein:vir:98 149 TGARLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLGE-DPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKWI 227 (434) T ss_pred cccccccccccceecccccccccCCCCccceEEeccCCCcCc-CCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhhh Confidence 011122666765443333 6899888877777777766666555555556665555 Q ss_pred EeCC--CCCHHHHHHHHHHHHHHhcccccccceeecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc Q lcl|Aclame:pro 227 QYVG--DLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL 303 (432) Q Consensus 227 ~~~~--~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~ 303 (432) .-.. ...++. ......++. ... ..+.+..++ ++.++.++..+..+. +++.++..+..++..-++|+..+++. T Consensus 228 ~G~~~~~~~~~~-~~~~~~~~~-~~~--~~~~i~~~~~~~~~~~q~~~~~~~~-~~~~l~~~i~~~~~~~~~p~~~~~~~ 302 (434) T protein:vir:98 228 KGHKFAKRTDPA-TGMTVVDQP-FVP--SPSAVWASEGENTQFGQLDATDLSG-FLKEHASDVRDMLTISQTPTYLYATD 302 (434) T ss_pred cCCCcccccccc-cccchhhhh-hhc--cccccccCCCCCceEEEecCcchHH-HHHHHHHHHHHHhcccCCCHHHhccc Confidence 4211 111111 111111111 111 123455555 467877776543333 77888899999999999999999753 Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------ccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHH Q lcl|Aclame:pro 304 SKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL----------FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGI 373 (432) Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l----------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~ 373 (432) .. + ++.++ ..+....+.-.+...+..|...| ..... ....+++.+..-...+..+.++++.++. T Consensus 303 ~~-n-~Sg~A--l~~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~--~~~~~~v~w~~~~~~s~~~~ada~~kl~ 376 (434) T protein:vir:98 303 LV-N-ISADT--IGALDILHVAKVREHIASFSEGLESVLALAAAQAGVPE--DYTEAEVRWANPAHVTMAVKADAATKLK 376 (434) T ss_pred cC-C-hHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--hheeeeEEecCCCCCCHHHHHHHHHHHH Confidence 21 1 11111 11212222222222222211111 11111 1123344445667788899999999999 Q ss_pred hCCCcCHHHHHHHhCCCCCCC---cceeeeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 QGGFLKPNEARSKEDLPPEAG---GDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 374 ~~g~~t~nE~R~~~gl~p~~~---gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) ..|+ +..-+++++|+++.+- .++................++.+|+.++ ++.+++| T Consensus 377 ~~g~-~~e~~~~~lg~~~~e~~r~~~e~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~dg 434 (434) T protein:vir:98 377 SIGY-PLDVIAEELDESPARVRRIVAGAASQALLAASLLPAPGAPSAGNVPD--SGGAVDG 434 (434) T ss_pred hcCC-cHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc--ccCCCCC Confidence 8885 7777889999876321 1100000000000011111222222222 2233333 No 150 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=99.06 E-value=2e-09 Score=68.28 Aligned_cols=396 Identities=12% Similarity=0.018 Sum_probs=172.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--ccccc--H--HH-HhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVK--G--KN-ALKVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~--~--~~-a~~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) .-+..+|.+.+...... ...+..+...... ..+.. . .. ...+....-+|+..+..+--.+|.+ T Consensus 14 ~~~~~~l~~~~~~~~~r----------l~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~ 83 (484) T protein:vir:77 14 EKAREEMLNLFTERTQD----------LGDNTAYYESERRPDAVGVTVPQQMQKLLAHVGYPRLYIDAIAARQELEGFRL 83 (484) T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHhccccchhcccccchhHHhhhhhcCcHHHHHHHHHhhhccCceec Confidence 22223332222110000 0001111111000 00000 0 00 1123344556666665443344443 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce-------EEEEEEcCcceEEE Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QALWPIDASKVTVY 146 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~l~~~~~~~v~~~ 146 (432) - + +. .....+..++. + | ........++.+++.+|.+|+.+.++..|.. ..+.+++|..+.++ T Consensus 84 ~---~-~~--~~~~~l~~i~~-~-N---~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~~ 152 (484) T protein:vir:77 84 G---G-AD--KADEQLWDWWQ-A-N---DLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIRVEPPTNLYAQ 152 (484) T ss_pred C---C-cc--hhHHHHHHHHH-h-c---CHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEEEeccceeEEE Confidence 1 1 11 11122333332 1 2 3346678899999999999999988877753 24677888888877 Q ss_pred EcCccceeccce---------------------eEEEecccCceEEE-------ccceEEEEecCCCCCcccccCHHHH- Q lcl|Aclame:pro 147 IDDVGLLNSKTK---------------------MWYVVNTGGQQRVL-------KPEEILHFKNGITLDGLVGVPTMEY- 197 (432) Q Consensus 147 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-------~~~~vih~~~~~~~~~~~G~s~~~~- 197 (432) .|.......... .++....+|..... ..=-|++|.++...+..+|.|-+.. T Consensus 153 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s~i~~~ 232 (484) T protein:vir:77 153 IDPRTRQVMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTTEITPE 232 (484) T ss_pred ecCCCCceEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcccchHH Confidence 764311100000 01111111111111 1112677776655566788886653 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH--HHHHHHHHHhcccccccceeecC-CCceeeecCCChh Q lcl|Aclame:pro 198 LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK--VFRENFESMSSGLQNSHRIALMP-VGYQFQPISLNMS 274 (432) Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~~~~~~~~ 274 (432) +...++......-......+-.+.|..++.--. ..+...+ .-...|.. ..+.+..++ ++.++.++..+.. T Consensus 233 v~~L~Da~~~~~s~~~~~~~~~a~p~~~i~G~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~q~~~~~~ 305 (484) T protein:vir:77 233 LRSVTDAAARTLMLMQATAELMGVPQRLLFGVK-GEELGVDPETGQTLFDA------YLARILAFEDHESKAQQFSAAEL 305 (484) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhCCC-cchhcccccccchhhhh------hhhhhcccCCCCceeEeecCCCh Confidence 323333333332222222233334444443111 1111000 01111211 123455555 4678887776544 Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH-------------HHHHHHHHHHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 275 DAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ-------------QQFYTDTLQATLTMYEQEMTYKLFLD 341 (432) Q Consensus 275 d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~-------------~~~~~~~l~P~~~~i~~~l~~~ll~~ 341 (432) +. +++.++.....|+.+-++|+..+++... |-++.+++. ...+...+.-+++.+....+ .. T Consensus 306 e~-~~~~l~~~i~~~s~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~l~~~~~~----~~ 379 (484) T protein:vir:77 306 RN-FVDALDALDRKAAAYTGLPPYYLSFSSE-NPASAEAIRSSESRLVKTVERKNKIFGGAWEQAMRVAYKVMN----GG 379 (484) T ss_pred HH-HHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC Confidence 43 7788888899999999999999976432 212222211 11112222222222211111 00 Q ss_pred hhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--Ccceeee------ccccccccccc Q lcl|Aclame:pro 342 SELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLV------NGNMLPIDMAG 411 (432) Q Consensus 342 ~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~--~gd~~~~------~~n~~~~~~~~ 411 (432) ........+++.+......+..+.++.+.+++++| +++..-+++++|+-+.+ ....... ...+.++... T Consensus 380 ~~~~~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~gi~s~et~~~~l~~~~~~~~e~~~~~~ee~~~~~~~~~~~~~~- 458 (484) T protein:vir:77 380 DIPPEYYRMESIWRDPSTPTYAAKADAATKLYNNGQGVIPKERARIDMGYSITEREEMRKWDEEEQAQGLGLMGTMFGT- 458 (484) T ss_pred CcccccccceEEecCCCCCCHHHHHHHHHHHHhccCCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccc- Confidence 00011123445556666788889999999999876 88888899999986543 1111100 0001111111 Q ss_pred cccCCCCCCCCCC-----CCCCCCCC Q lcl|Aclame:pro 412 QAYLKGGDTNGEV-----SKEGNEGN 432 (432) Q Consensus 412 ~~~~~gg~~~~~~-----~~~~~e~~ 432 (432) ....+|+.+.++ ++.+.+-+ T Consensus 459 -~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (484) T protein:vir:77 459 -DPSGGGNPDNPETPEPQPNPAEEAA 483 (484) T ss_pred -cccCCCCCCCCCcccccCCCccccC Confidence 111111111111 11111111 No 151 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=98.99 E-value=6e-09 Score=65.66 Aligned_cols=402 Identities=11% Similarity=0.057 Sum_probs=191.9 Q ss_pred CchHHHHHHhccccc-----cccc-----cccccCCch-HH---HHHhhcCCcCcc---c----ccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-----RQTS-----QVIELNKDD-EK---LLEWLGISPSTI---S----VKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-----~~~~-----~~~~~~~~~-~~---~~~~~g~~~~~~---~----v~~~~a~~~~~v~~~i 59 (432) ||||++||+++.... +... ..+..+... .. ...|+....... . ...+..........++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:30 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 999999999975311 1100 111111111 11 112332111111 0 0011222334556666 Q ss_pred HHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEc Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 139 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~ 139 (432) +..|+-+..-|..+.-.+ ..+...|+. -...-.....+...+...+..|.+++.+..+.. . ..+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d---------~~~~~~l~~-il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~~-~-~~I~~v~ 148 (500) T protein:vir:30 81 KKIASLVFNEQAEIKVDD---------DAANEFISE-TLKNDRFNKNFERYLESCLALGGLAMRPYVDGD-K-VRVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCC---------hHHHHHHHH-HHhhccHHHHHHHHHHHHhhcCCEEEEEEEeCC-c-eEEEEEc Confidence 777776665554433221 122222321 111123355677778888889999998877643 2 2355566 Q ss_pred CcceEEEEcC-cccee------------ccce------------------eEEEeccc-----CceEE-------Ecc-- Q lcl|Aclame:pro 140 ASKVTVYIDD-VGLLN------------SKTK------------------MWYVVNTG-----GQQRV-------LKP-- 174 (432) Q Consensus 140 ~~~v~~~~~~-~~~~~------------~~~~------------------~~~~~~~~-----~~~~~-------~~~-- 174 (432) |..+-+...+ ..... .... .+..+... |.... +.+ T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:30 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 6665553221 11100 0000 00011100 11100 000 Q ss_pred -------ceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE-----EeCCC-CCHHHH Q lcl|Aclame:pro 175 -------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV-----QYVGD-LNEDAK 237 (432) Q Consensus 175 -------~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-----~~~~~-~~~~~~ 237 (432) --..|++.+.+. +..+|.|.+..+...++..+........-++.| ....++ ..... .+.+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g-~~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:30 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMG-QRRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhC-cceeeechHHhcccCCCCCcccc Confidence 013455543222 345799999999998888877777777777654 333333 11111 111100 Q ss_pred HHHHHHHH-HHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-- Q lcl|Aclame:pro 238 KVFRENFE-SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-- 314 (432) Q Consensus 238 ~~~~~~~~-~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-- 314 (432) ....-... ..|.... .-.+++..++.++....+-++.+..+...++|+...|+++..++...++.. ++.+. T Consensus 308 ~~~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s 381 (500) T protein:vir:30 308 PRPRFESDQNVYIRMG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVS 381 (500) T ss_pred CCcccCCCcceEEEcC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHH Confidence 00000000 0010000 001233457777777777889999999999999999999999987655432 22221 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 315 -----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 383 (432) Q Consensus 315 -----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~ 383 (432) ....++.+|..++..|.+.....-+..........+.++++.-...|.++.++...+++.+|+|+..++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:30 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 233344445555555543221100111112233456666677678899999999999999999999998 Q ss_pred HHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 384 RSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 384 R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) +.++ |++..+ ..+. +..+. .......+......+-.+| T Consensus 462 i~~~~g~~eee-a~~~-----l~~i~---~E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:30 462 IQKVLNVTEEK-AQEI-----AAEIN---TGIVDEINQQRTDTHLYGE 500 (500) T ss_pred HHhcCCCCHHH-HHHH-----HHHHH---HhccccCCCCCccccccCC Confidence 7554 654321 1111 00000 0011111112222333333 No 152 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=98.99 E-value=6e-09 Score=65.66 Aligned_cols=402 Identities=11% Similarity=0.057 Sum_probs=191.9 Q ss_pred CchHHHHHHhccccc-----cccc-----cccccCCch-HH---HHHhhcCCcCcc---c----ccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-----RQTS-----QVIELNKDD-EK---LLEWLGISPSTI---S----VKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-----~~~~-----~~~~~~~~~-~~---~~~~~g~~~~~~---~----v~~~~a~~~~~v~~~i 59 (432) ||||++||+++.... +... ..+..+... .. ...|+....... . ...+..........++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:98 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 999999999975311 1100 111111111 11 112332111111 0 0011222334556666 Q ss_pred HHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEc Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 139 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~ 139 (432) +..|+-+..-|..+.-.+ ..+...|+. -...-.....+...+...+..|.+++.+..+.. . ..+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d---------~~~~~~l~~-il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~~-~-~~I~~v~ 148 (500) T protein:vir:98 81 KKIASLVFNEQAEIKVDD---------DAANEFISE-TLKNDRFNKNFERYLESCLALGGLAMRPYVDGD-K-VRVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCC---------hHHHHHHHH-HHhhccHHHHHHHHHHHHhhcCCEEEEEEEeCC-c-eEEEEEc Confidence 777776665554433221 122222321 111123355677778888889999998877643 2 2355566 Q ss_pred CcceEEEEcC-cccee------------ccce------------------eEEEeccc-----CceEE-------Ecc-- Q lcl|Aclame:pro 140 ASKVTVYIDD-VGLLN------------SKTK------------------MWYVVNTG-----GQQRV-------LKP-- 174 (432) Q Consensus 140 ~~~v~~~~~~-~~~~~------------~~~~------------------~~~~~~~~-----~~~~~-------~~~-- 174 (432) |..+-+...+ ..... .... .+..+... |.... +.+ T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:98 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 6665553221 11100 0000 00011100 11100 000 Q ss_pred -------ceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE-----EeCCC-CCHHHH Q lcl|Aclame:pro 175 -------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV-----QYVGD-LNEDAK 237 (432) Q Consensus 175 -------~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-----~~~~~-~~~~~~ 237 (432) --..|++.+.+. +..+|.|.+..+...++..+........-++.| ....++ ..... .+.+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g-~~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:98 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMG-QRRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhC-cceeeechHHhcccCCCCCcccc Confidence 013455543222 345799999999998888877777777777654 333333 11111 111100 Q ss_pred HHHHHHHH-HHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-- Q lcl|Aclame:pro 238 KVFRENFE-SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-- 314 (432) Q Consensus 238 ~~~~~~~~-~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-- 314 (432) ....-... ..|.... .-.+++..++.++....+-++.+..+...++|+...|+++..++...++.. ++.+. T Consensus 308 ~~~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s 381 (500) T protein:vir:98 308 PRPRFESDQNVYIRMG-----GRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVS 381 (500) T ss_pred CCcccCCCcceEEEcC-----CCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHH Confidence 00000000 0010000 001233457777777777889999999999999999999999987655432 22221 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 315 -----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 383 (432) Q Consensus 315 -----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~ 383 (432) ....++.+|..++..|.+.....-+..........+.++++.-...|.++.++...+++.+|+|+..++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:98 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 233344445555555543221100111112233456666677678899999999999999999999998 Q ss_pred HHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 384 RSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 384 R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) +.++ |++..+ ..+. +..+. .......+......+-.+| T Consensus 462 i~~~~g~~eee-a~~~-----l~~i~---~E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:98 462 IQKVLNVTEEK-AQEI-----AAEIN---TGIVDEINQQRTDTHLYGE 500 (500) T ss_pred HHhcCCCCHHH-HHHH-----HHHHH---HhccccCCCCCccccccCC Confidence 7554 654321 1111 00000 0011111112222333333 No 153 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.98 E-value=8.1e-09 Score=64.95 Aligned_cols=396 Identities=11% Similarity=0.010 Sum_probs=171.6 Q ss_pred Cch---------HHHHHHhccccccccccccccCCchHHHHHhhcCCcC--ccc--cc---HHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKI---------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TIS--VK---GKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~--v~---~~~a~~~~~v~~~i~~ia~ 64 (432) +|+ ++.|.+.+..... .. ..+..+.-+... ..+ +. ......+.....+|+..+. T Consensus 6 ~~~~~~~~~~~~~~~L~~~~~~~~~---r~-------~~~~~YY~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~ 75 (485) T protein:vir:24 6 PGQEEIADPAIARDEMVSAFEDQNQ---NL-------RSNTSYYEAERRPEAIGVTVPVQMQSLLAHVGYPRLYVDSIAE 75 (485) T ss_pred CCCCcccchHHHHHHHHHHHHHHHH---HH-------HHHHHHHhccCchhhcCcccchhhhhhhhccchHHHHHHHHhh Confidence 111 0111111100000 00 000000000000 000 00 0000112344555666655 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce-------EEEEE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------QALWP 137 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~-------~~l~~ 137 (432) .+--.+|.+- + +.+ .+..+..++.. | ....+...++.+++.+|.+|+++.++..+.. ..+.+ T Consensus 76 ~l~~~g~~~~---~-~~~--~~~~l~~i~~~--N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~ 144 (485) T protein:vir:24 76 RQAVEGFRLG---D-ADE--ADEELWQWWQA--N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRV 144 (485) T ss_pred hhccCceecC---C-Cch--hHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEE Confidence 5544455432 1 111 11223333321 2 2346678899999999999999887765432 24777 Q ss_pred EcCcceEEEEcCccc-eeccce--------------------eEEEecccCceEE-------EccceEEEEecCCCCCcc Q lcl|Aclame:pro 138 IDASKVTVYIDDVGL-LNSKTK--------------------MWYVVNTGGQQRV-------LKPEEILHFKNGITLDGL 189 (432) Q Consensus 138 ~~~~~v~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~~~~-------~~~~~vih~~~~~~~~~~ 189 (432) ++|..+.++.|.... ...... .++....+|.... +..=-|++|++.....+. T Consensus 145 ~~p~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~ 224 (485) T protein:vir:24 145 EPPTRMYAEIDPRIGRPAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDL 224 (485) T ss_pred eccceeEEEeeCCcCceeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCc Confidence 888888877764311 100000 0111111111100 111126777766566667 Q ss_pred cccCHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH----HHHHHHHHHhcccccccceeecC-CC Q lcl|Aclame:pro 190 VGVPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK----VFRENFESMSSGLQNSHRIALMP-VG 263 (432) Q Consensus 190 ~G~s~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~n~g~~~vl~-~g 263 (432) +|.|-+.. +...++....+.-.........+.|..++.-- +.++.. .-...|.. ..+.+..++ ++ T Consensus 225 ~G~s~i~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~---~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~ 295 (485) T protein:vir:24 225 YGTSEITPELRSMTDAAARILMLMQATAELMGVPQRLIFGI---KPEEIGVDPETGQTLFDA------YLARILAFEDAE 295 (485) T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHhhcchhhhhccC---Cccccccccccccchhhh------cccceeccCCCC Confidence 89887653 33444443333333333333344554444321 111110 01111211 123445554 56 Q ss_pred ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH-------------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 264 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ-------------QQQQFYTDTLQATLTMY 330 (432) Q Consensus 264 ~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~-------------~~~~~~~~~l~P~~~~i 330 (432) .++.++..+..+ .+++.++....+++..=++|+..+++....+ ++.++ .....+...+..+++.+ T Consensus 296 ~~~~q~~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~-~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~ 373 (485) T protein:vir:24 296 GKIQQFSAAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNP-ASAEAIRAAESRLIKKVERKNAIFGGAWEEAMRLA 373 (485) T ss_pred ceEEeecccchH-HHHHHHHHHHHHHhcccCCCHHHhccccCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 788777654433 3678888888888888999999997543221 11111 11222223333333332 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--Ccceeee-----c Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLV-----N 401 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~--~gd~~~~-----~ 401 (432) ..-++. ....... ..+++.+..-...+..+.++.+.+++.+| +++..-+++++|+.+.+ ...+... . T Consensus 374 ~~~~~~--~~~~~d~--~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l~~~~d~~~e~~~~~ee~~~~~ 449 (485) T protein:vir:24 374 YRLMKG--GDVPPDM--LRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARKDMGYSIAEREEMRRWDEEEAAMG 449 (485) T ss_pred HHHhcC--CCCcccc--ceeeEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHhhCCCCHhHHHHHHHHHHHHhhhh Confidence 221110 0000011 23334444445678888899999998865 77887788999887643 1111100 0 Q ss_pred c----ccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 402 G----NMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 402 ~----n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) . .+............+++..++.+.+.+.++ T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 484 (485) T protein:vir:24 450 LGLLGTMVDADPTVPGSPNPTPAPKPQPAIEGGDS 484 (485) T ss_pred hhHHHhhcccCCCCCCCCCCCCCCCCccCCCCCCC Confidence 0 000001111111222222222222222333 No 154 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=98.97 E-value=5.4e-09 Score=65.92 Aligned_cols=409 Identities=11% Similarity=0.084 Sum_probs=190.2 Q ss_pred CchHHHHHHhcccccccc-cc-c------cccCCchH---HH---HHhh-cCCcCc------ccccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQT-SQ-V------IELNKDDE---KL---LEWL-GISPST------ISVKGKNALKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~-~~-~------~~~~~~~~---~~---~~~~-g~~~~~------~~v~~~~a~~~~~v~~~i 59 (432) ||||+++++++....+.. .+ . ........ .+ ..|+ |..... .....+..........++ T Consensus 1 m~~~~~~k~~~~k~~~~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (522) T protein:vir:47 1 MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS 80 (522) T ss_pred CchHHHHHHHHHHHHHHhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHH Confidence 999999999876333110 00 0 00111111 11 1222 211110 001111223335556666 Q ss_pred HHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEc Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPID 139 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~ 139 (432) +..|+-+..-|..+.-.++ .....+..+|. .-.....++..+...+..|.+++.+..+. |.+ .+..++ T Consensus 81 ~~~A~lv~~e~~~i~v~d~-----~~~~~l~~~l~-----~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~~-~i~~v~ 148 (522) T protein:vir:47 81 KKIASLVYNEQATITTKNE-----ILQKFLDDMLT-----NDRFNKNFERYLESCLALGGLAMRPYIDG-DKV-RVAFIQ 148 (522) T ss_pred HHHhhhhcCCcceeecCCh-----HHHHHHHHHHh-----hcchHHHHHHHHHHhhccCCEEEEEEEcC-Cce-EEEEEc Confidence 7777766654444332111 11112222221 22335567777888888998888877663 322 233444 Q ss_pred CcceEEEE-cCcccee-----------------cc------------------------ceeEEEeccc-----CceEE- Q lcl|Aclame:pro 140 ASKVTVYI-DDVGLLN-----------------SK------------------------TKMWYVVNTG-----GQQRV- 171 (432) Q Consensus 140 ~~~v~~~~-~~~~~~~-----------------~~------------------------~~~~~~~~~~-----~~~~~- 171 (432) +..+-+.. +..+... +. ...+..+... |..+. T Consensus 149 ad~~~P~~~~~~~~~e~a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l 228 (522) T protein:vir:47 149 APVFFPLESNTQDVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNL 228 (522) T ss_pred CCceEEEEEcCCceEEEEEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccc Confidence 44444321 1111000 00 0000001100 11110 Q ss_pred --------Ecc---------ceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEE---- Q lcl|Aclame:pro 172 --------LKP---------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLV---- 226 (432) Q Consensus 172 --------~~~---------~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~---- 226 (432) +.+ --..||+.+-+. +..+|.|.+..+...++..+........-++.|-. ..++ T Consensus 229 ~~~~e~~~l~~~~~~~~~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~-~i~v~~~~ 307 (522) T protein:vir:47 229 SELDKYKNLEPVTVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQR-RVIVPEHL 307 (522) T ss_pred cccccccCCCCceEeCCCCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccc-eeecchHH Confidence 011 013366543222 34679999998888888777666666666665533 2222 Q ss_pred -EeCCCC-C-HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc Q lcl|Aclame:pro 227 -QYVGDL-N-EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL 303 (432) Q Consensus 227 -~~~~~~-~-~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~ 303 (432) ...... + +......-+.-...|.+.. .-.+++-+++.++....+-++.+..+...+.|+...|+++..++.. T Consensus 308 l~~~~~~~~g~~~~~~~fd~~~~~f~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~ 382 (522) T protein:vir:47 308 TQRQYQRPDGTIDFRPRFDVEQNVYMQIG-----GSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFD 382 (522) T ss_pred hccCCCCCCcccccccccCcccceEeecC-----CCCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCcc Confidence 221111 0 0000000000011111110 0012334567777777888899999999999999999999999876 Q ss_pred cccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHH Q lcl|Aclame:pro 304 SKATLNNIEQQ-------------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYR 370 (432) Q Consensus 304 ~~~~~~~~~~~-------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~ 370 (432) ..+. .+..+. ....++.+|..++..|.+.....-+..........+.+++++-...|.++.++... T Consensus 383 ~~~~-kTAtEi~s~~~~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~ 461 (522) T protein:vir:47 383 GQGM-KTATEIVSENSDTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWA 461 (522) T ss_pred cccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHH Confidence 5433 233332 33444555555555555333211111112223455777778877889999999999 Q ss_pred HHHhCCCcCHHHHHHHh-CCCCCCCcc-ee-eeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 371 TGIQGGFLKPNEARSKE-DLPPEAGGD-RL-LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 371 ~~~~~g~~t~nE~R~~~-gl~p~~~gd-~~-~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +++.+|+|++.+++.++ |+...+ .+ ++ .+.....+. .+....--++ +.+..++++|.- T Consensus 462 ~~v~aG~~s~e~~i~~~~g~~eee-a~~el~ri~~E~~~~-~~~~~~~~~~--~~~~~~~~d~~~ 522 (522) T protein:vir:47 462 KMVAAGFSTKKRAIGKTLNISGVE-AEKELNAINSELLPM-NDAELAIYGM--HDQNEEKADDKG 522 (522) T ss_pred HHHhcCCCCHHHHHHhcCCCChHH-HHHHHHHHHHhhccC-CCCCCCCCCC--CCcccccCCCCC Confidence 99999999999977654 654321 11 11 000110110 0000111111 111112222222 No 155 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=98.96 E-value=2.7e-09 Score=67.53 Aligned_cols=413 Identities=10% Similarity=0.086 Sum_probs=193.4 Q ss_pred CchHHHHHH----------hcc--ccccc-cccccccCCchH-----HHHHhhcCCcCcc---cccHH-HHhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKK----------FFN--FEKRQ-TSQVIELNKDDE-----KLLEWLGISPSTI---SVKGK-NALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~----------~~~--~~~~~-~~~~~~~~~~~~-----~~~~~~g~~~~~~---~v~~~-~a~~~~~v~~~ 58 (432) |.+|.++.. .++ .++.. .+..+..+...+ ....++|+...+. --.++ -++.+|.|..| T Consensus 4 ~~~w~~~de~~~~~~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg~~~n~~eLI~~YR~ma~~~pEVd~A 83 (533) T protein:vir:58 4 LEKYKKLNEAVNFTNFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGGIEFNRFFLYDMYDRMDYTDPLISTV 83 (533) T ss_pred cchhhhhhHHHHHHHhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhhhccccccHHHHHHHHHHhhccCcchhhH Confidence 444433211 111 12221 112222222221 1122334322110 01123 33578999999 Q ss_pred HHHHHHhhc-----cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC-CCCce Q lcl|Aclame:pro 59 IKILSESVS-----KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RKGKV 132 (432) Q Consensus 59 i~~ia~~ia-----~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~-~~g~~ 132 (432) |+.|++.+. .-|+.+...+.+ .. ......++.--|....+++ +++.|.+.|..|..++.+ ..+-+ T Consensus 84 ideIvneaiv~d~~~~pV~v~l~~~e-~s----~~iK~kI~~lldf~~~~~~----~fR~WYVDGriy~Hkiik~~k~GI 154 (533) T protein:vir:58 84 LDIIADECTIPNENGNIVDVVTKDIE-LA----KAILSYLDYVINIEKNAYP----IIRNMIKYGDMFLHILEKGSDGTI 154 (533) T ss_pred HHhhhceeeEecCCCceeEeeccccc-cc----HHHHHHHHHHhcchhhhhH----HHHhhhhcceeEEEeccCCcccch Confidence 999998653 233333322111 00 1111112222233344444 667788889999988643 34558 Q ss_pred EEEEEEcCcceEEEEcCccceeccceeEEEec-------ccCceEEEccceEEEEecCC-CCCcccccCHHHHHHHHHHH Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDDVGLLNSKTKMWYVVN-------TGGQQRVLKPEEILHFKNGI-TLDGLVGVPTMEYLKSTLEN 204 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~vih~~~~~-~~~~~~G~s~~~~~~~~~~~ 204 (432) .+|..++|..++.++.-.. ...||.+. ..+....++.+.|+|+..+. ..+..+++|-|..+.+.+.. T Consensus 155 ~elr~lDPr~i~~vr~~~t-----~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQ 229 (533) T protein:vir:58 155 EKFQVVSPYIFSKRYNPET-----DTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQ 229 (533) T ss_pred hhheecCCeeeEEEEeecc-----ceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHH Confidence 8999999999988775421 12233333 33445678999999998763 33667888989888777777 Q ss_pred HHHHHHHHHHHHhccCCcceEEEeCCCC-C----HHHHHHHHHHHHHHhccccccccee----------ec--------- Q lcl|Aclame:pro 205 SASADKFINNFYKQGLQVKGLVQYVGDL-N----EDAKKVFRENFESMSSGLQNSHRIA----------LM--------- 260 (432) Q Consensus 205 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~g~~n~g~~~----------vl--------- 260 (432) ...++...--+--..+.-+-++-++-+. . ++-.+.+..++++.+-=..++|.+. .+ T Consensus 230 LkmiEDAlVIYRisRAPeRRvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRRe 309 (533) T protein:vir:58 230 LRLMEDALMLYRVVRSVDRRVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRG 309 (533) T ss_pred HHHHHHHHHHHhhcCChhheEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccC Confidence 6666655544433334344455444332 2 2234444555555442222344441 11 Q ss_pred -CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 261 -PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLF 339 (432) Q Consensus 261 -~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll 339 (432) ..|+++++|.-. .+.-++..++..+.+..+++||.+-|...+....++--.....-+..-|.-+-..+.+.|.+.|. T Consensus 310 GgrgTEI~TLpGg--~lgemeDV~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiKF~KFI~rLR~rF~~ll~~qLi 387 (533) T protein:vir:58 310 DRRAVEIDILQGS--KVDLAEDVEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIKFNNTIKRIQGFFVEELERMVR 387 (533) T ss_pred CCccceeeecCCC--CCCcHHHHHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHhcccc Confidence 246788888643 25566788899999999999999999765543332211111222444566677778887877765 Q ss_pred cchhhcc-hhhhhhhhhhh----hhhh-HHHHHHHHHHHHhCCCcCH-----------HHHHH------HhCCCCC---C Q lcl|Aclame:pro 340 LDSELDK-GFYSKFNVDAI----LRAD-IKTRYEAYRTGIQGGFLKP-----------NEARS------KEDLPPE---A 393 (432) Q Consensus 340 ~~~~~~~-~~~~~fd~~~l----~~~d-~~~~~~~~~~~~~~g~~t~-----------nE~R~------~~gl~p~---~ 393 (432) ....... .+.+.|..+.. .... +..|+..+..+ -+++.- +|+.. ..+..++ + T Consensus 388 lk~iit~eew~~~f~~Dn~f~ElKe~Eil~~Ri~~l~~~--dpyvgk~yi~k~ILr~tdei~~q~e~ie~E~~~~~~~~~ 465 (533) T protein:vir:58 388 MNKEFADQDFRLVMNRSNSIVEGERFAVIEQRIGIAERL--KGWVREDWIYSNILQIPYDLKPQEEVAEAAGGGGLFDTG 465 (533) T ss_pred cccCcchhheeeeeeccchHHHHHHHHHHHHHHHHHHHh--cchhhHHHHHHHHhcCChhhhHHHHHHHHhhcCCCCCCC Confidence 5433322 23333333222 1111 11222222221 111111 22221 1112211 1 Q ss_pred Ccceeeecccc-----ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNM-----LPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 394 ~gd~~~~~~n~-----~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +-+.=+.|... .|++.+...... +...+-++..+++.| T Consensus 466 ~~~~e~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~ 508 (533) T protein:vir:58 466 GFGEETTPADFLGERGSPIESPRGRTEF-DFGTEGGEELGGELN 508 (533) T ss_pred CcccccCCcccCccccCcccCCCChhhH-hcccCCccccccccc Confidence 11111122211 122111100000 000000011111111 No 156 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=98.96 E-value=3.6e-09 Score=66.86 Aligned_cols=408 Identities=7% Similarity=-0.052 Sum_probs=164.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc--CcccccHHHHh-----ccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKGKNAL-----KVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~~~~a~-----~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) +-++++|.+.+..... ....+..+.-... ...+.+....+ ......-+|+.+++.+---.|.+ T Consensus 23 ~~~i~~L~~~~~~~~~----------r~~~l~~YY~G~~~i~~~~~~~p~~~~~~~~v~n~~~~iVd~~a~rl~~~Gf~~ 92 (504) T protein:vir:99 23 VDKVNGLYQQLVDRTP----------RNLLRASFYDGKYAIRQIGNLIPPEYLRTATVLGWSAKAVDTLARRCNLESFVW 92 (504) T ss_pred HHHHHHHHHHHHHHhH----------HHHHHHHHHhccccchhccccccHHHHHHhhccCcHHHHHHHHHhhhccceeeC Confidence 3333333332211100 0000111111100 01111111111 12333445555555433233332 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceE-EEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ-ALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~-~l~~~~~~~v~~~~~~~~~ 152 (432) .+ +.. .+..+..++. -|.. ......+..+.+++|.+|+.+..+.+|++. .+.+++|..+.++.|.... T Consensus 93 ---~d-~~~--~~~~l~~i~~--~N~l---d~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP~~~~~iyD~~~~ 161 (504) T protein:vir:99 93 ---PD-GDY--GSIGGPDVWD--ENFF---ATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSAMQATGEWNSRRN 161 (504) T ss_pred ---CC-CCh--hhHHHHHHHH--hcCh---hhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceeEEEEeCCCC Confidence 11 111 1122333332 2332 345678899999999999999888888754 5678899998888775322 Q ss_pred eeccceeEEEecccCceE---EEccce------------------------EEEEecCCCCCcccccCHHH-HHHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQQR---VLKPEE------------------------ILHFKNGITLDGLVGVPTME-YLKSTLEN 204 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~~~---~~~~~~------------------------vih~~~~~~~~~~~G~s~~~-~~~~~~~~ 204 (432) .......++....+|... .+.++. |++|.+.......+|.|-+. .+...++. T Consensus 162 ~~~~a~~~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~~~v~~l~Da 241 (504) T protein:vir:99 162 AMDSLLSITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRITRPVMSLQQR 241 (504) T ss_pred ceeEEEEEEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccchhhHHHHHHH Confidence 111111112122222211 122222 56665544445667877543 22223332 Q ss_pred HHHHHHHHHHHHhccCCcceEEEe-CC-CCCHH---HHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH Q lcl|Aclame:pro 205 SASADKFINNFYKQGLQVKGLVQY-VG-DLNED---AKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 279 (432) Q Consensus 205 ~~~~~~~~~~~~~n~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~ 279 (432) .....-......+-.+.|.-++.- .. ...++ ....++......+.=..+....+.-..+.++.+++...-+ .++ T Consensus 242 ~~~~~~~~~~~~e~~a~p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~q~~~~~l~-~~~ 320 (504) T protein:vir:99 242 ALKGCIRMDGHADVYSFPQLILLGADAKNFRNKDGSMKPAWQIALARVFALPDDEDEPDAARARADVKQFPASSPQ-PHI 320 (504) T ss_pred HHHHHHHHHHHHHHhcchhhhhccCCccccccccccccchhhhhhhhhhcCCCccccccccCccceeeecCCCChH-HHH Confidence 222222212112222333333321 11 00111 1112222222221111111111111234666666554332 378 Q ss_pred HHHHHHHHHHHHHhcCChhhccCccccccccHHHH---HHHHHHHHHHHHHHHHHHHHHHhh------ccch--hhcchh Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ---QQQFYTDTLQATLTMYEQEMTYKL------FLDS--ELDKGF 348 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~---~~~~~~~~l~P~~~~i~~~l~~~l------l~~~--~~~~~~ 348 (432) +.++.....|+..-++|+..+|.....+-++.+++ ...+... +.-..+.+.+.+.+-+ .... ...... T Consensus 321 ~~l~~~i~~~a~~t~~P~~~lG~~~~~n~sSa~Ai~~~~~~L~~k-a~~k~~~f~~~l~~~~rla~~~~~~~~~~~~~~~ 399 (504) T protein:vir:99 321 EMLEQIAMMFSGETSIPVESLGFSNRANPTSADAYIASREDLIAE-AEGATDDWSPAFRRSMIRALAIKNGLDRIPPEWK 399 (504) T ss_pred HHHHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccc Confidence 89999999999999999999986544332222222 1111111 1112222222222210 0000 011123 Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcC--H-HHHHHHhCCCCCC---Ccce------------eeecccccccccc Q lcl|Aclame:pro 349 YSKFNVDAILRADIKTRYEAYRTGIQGGFLK--P-NEARSKEDLPPEA---GGDR------------LLVNGNMLPIDMA 410 (432) Q Consensus 349 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t--~-nE~R~~~gl~p~~---~gd~------------~~~~~n~~~~~~~ 410 (432) .+++.+.+....+..+.++++.|++++|... . .-+++++|+.+.+ ..++ +.-..+. +.+.. T Consensus 400 ~~~v~w~d~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~~~~~~l~~~~~~-~~~~~ 478 (504) T protein:vir:99 400 TIDSKFRSPLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSVSIIEALNRRQQE-AATAG 478 (504) T ss_pred cceeEecCCCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhHHHHHHHhcccCC-CCCCC Confidence 3444445667778889999999999988532 2 3356777887532 0000 0000000 00000 Q ss_pred ccccCCCCCC-CCCCCCCCCCCC Q lcl|Aclame:pro 411 GQAYLKGGDT-NGEVSKEGNEGN 432 (432) Q Consensus 411 ~~~~~~gg~~-~~~~~~~~~e~~ 432 (432) .......++. ..+++..+...+ T Consensus 479 ~~~~~~~~e~a~~~~~~~~~~p~ 501 (504) T protein:vir:99 479 EDQDQGAGEPPANEPPAALGRPT 501 (504) T ss_pred CCCCcCCCCCCCCCCCccCCCcc Confidence 0000000110 001111111111 No 157 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=98.95 E-value=1.1e-08 Score=64.25 Aligned_cols=406 Identities=10% Similarity=0.038 Sum_probs=181.4 Q ss_pred CchHHHHHHhcccccccccc----c--cccCCchHHHHHhhcCCcCc------------cccc----HHHHhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQ----V--IELNKDDEKLLEWLGISPST------------ISVK----GKNALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~------------~~v~----~~~a~~~~~v~~~ 58 (432) |.+...++............ . .........+.........- .... ...=+.++....+ T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~~i 92 (503) T protein:vir:59 13 EELNEIIVESAKEIAEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLF 92 (503) T ss_pred HhHHHhhhhhhhhccchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHHHH Confidence 33332222111000000000 0 00000001111111100000 0000 0000124567778 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..+..+..-|+.+...++. .. .....+.. | ........++.+++.+|.+|+.+..+.+|.+ .+..+ T Consensus 93 vd~~~~yl~g~~~~~~~~d~~-----~~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~ 160 (503) T protein:vir:59 93 VDQKTQYLVGEPVTFTSDNKT-----LL-EYVNELAD--D---DFDDILNETVKNMSNKGIEYWHPFVDEEGEF-DYVIF 160 (503) T ss_pred HHHHHhhhhcCCeeeccCcHH-----HH-HHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEeecCCCce-EEEEE Confidence 888888888888876432211 11 11222221 2 3456677789999999999999998888875 47888 Q ss_pred cCcceEEEEcCccce-eccceeEEEe-cccCc----eEEEccceEEEEecC----------------------------- Q lcl|Aclame:pro 139 DASKVTVYIDDVGLL-NSKTKMWYVV-NTGGQ----QRVLKPEEILHFKNG----------------------------- 183 (432) Q Consensus 139 ~~~~v~~~~~~~~~~-~~~~~~~~~~-~~~~~----~~~~~~~~vih~~~~----------------------------- 183 (432) +|..+.++.++.... ......+|.. ...+. ...+.++.+.++... T Consensus 161 ~p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503) T protein:vir:59 161 PAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWG 240 (503) T ss_pred ccceeEEEEeCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCC Confidence 998888877653211 1111111111 11111 112333333332210 Q ss_pred -----CCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccccee Q lcl|Aclame:pro 184 -----ITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIA 258 (432) Q Consensus 184 -----~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~ 258 (432) ...+...|.|-+..+...++....+.-.....++..+.|-.+++--.....++ ....+. .++++ T Consensus 241 ~vPiv~~~nn~~~~sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~~~~---~~~~~~--------~~~~~ 309 (503) T protein:vir:59 241 RVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKE---FTANLR--------YHSVI 309 (503) T ss_pred ccceEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccccch---hhhhhh--------cccce Confidence 00122458887877777777766665555666666677766655322222221 111111 12345 Q ss_pred ecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcc-CccccccccHH----------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 259 LMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIE----------QQQQQFYTDTLQATL 327 (432) Q Consensus 259 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~-~~~~~~~~~~~----------~~~~~~~~~~l~P~~ 327 (432) .++++.+++.+........+....+...+.|+..-++|..-.. ..++.++.... +.....+...+..++ T Consensus 310 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~ 389 (503) T protein:vir:59 310 KVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFF 389 (503) T ss_pred eccCCCcceeEeccCCHHHHHHHHHHHHHHHHHHhcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 5555444444443333444456666666777666666543221 11122221211 122334444555555 Q ss_pred HHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--cceeeeccc-c Q lcl|Aclame:pro 328 TMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGN-M 404 (432) Q Consensus 328 ~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--gd~~~~~~n-~ 404 (432) +.|...+...- .........+.+.+..-...|..+.++.+.+++.+|+++...+.+++++-+.+. ..+...-.. . T Consensus 390 ~~i~~~~~~~~--~~~~~~~~~i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l~~v~d~~~E~~ri~~E~~~~ 467 (503) T protein:vir:59 390 WFFAEYLRNTG--KGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467 (503) T ss_pred HHHHHHHHhcc--CcccccccceeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhCCCCCCHHHHHHHHHHHHHHH Confidence 55544443211 111111122455556677889999999999999999999999999887643221 111100000 0 Q ss_pred ccccccccccCCCCCCCC---CCCCCCCCCC Q lcl|Aclame:pro 405 LPIDMAGQAYLKGGDTNG---EVSKEGNEGN 432 (432) Q Consensus 405 ~~~~~~~~~~~~gg~~~~---~~~~~~~e~~ 432 (432) .... .......++..++ ++....++.+ T Consensus 468 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (503) T protein:vir:59 468 AEMQ-GNLLDDEGGDDDLEEDDPNAGAAESG 497 (503) T ss_pred Hhhh-ccccCccCCCCCCCcCCCCCCcccCC Confidence 0000 0000000111111 1111111111 No 158 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.95 E-value=4.7e-09 Score=66.22 Aligned_cols=399 Identities=14% Similarity=0.083 Sum_probs=184.2 Q ss_pred hHH----HHHHhccccc--ccccc---ccccCCch---HHH---HHhhcCCcCccc---------ccHHHHhccHHHHHH Q lcl|Aclame:pro 3 IVD----SVKKFFNFEK--RQTSQ---VIELNKDD---EKL---LEWLGISPSTIS---------VKGKNALKVATVFAC 58 (432) Q Consensus 3 ~~~----~l~~~~~~~~--~~~~~---~~~~~~~~---~~~---~~~~g~~~~~~~---------v~~~~a~~~~~v~~~ 58 (432) ||+ +||.+++... +.... ........ ..+ ..|.......+. .-.+..+.......+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~~~s~n~~~~i 80 (499) T protein:vir:80 1 MINQIIAGVKGVMRRMGLLKSLKDVTDHKKVNANDEDYKYIDMWKRLYQGNYAEWHNLNYEHNGNPVNRRQLSMNLPKVT 80 (499) T ss_pred ChhHHHHHHHHHHHHhccccchhhhhcCCCCcCCHHHHHHHHHHHHHhcCCcchhhccccccCCCccccceeecchHHHH Confidence 555 4555443211 01000 11111111 111 122211110000 000122234556667 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..|+-+..-|..+...+ .++...|+. -...-.....+...+...+..|.+|+.+..+.+|.+ .+..+ T Consensus 81 v~~~a~~l~~ep~~i~~~d---------~~~~e~l~~-~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v 149 (499) T protein:vir:80 81 AKYMSKLLFNEKVKINIDD---------ETAEEFVLN-VLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFA 149 (499) T ss_pred HHHHHHhhhCCcceEeeCC---------HHHHHHHHH-HHhhccHHHHHHHHHHHHhhcCcEEEEEEECCCCcE-EEEEE Confidence 7888887777666654322 122333321 111223456677788889999999999998877764 35667 Q ss_pred cCcceEEEEcCccceeccc---------ee---------------EEE-----ecc-c----CceEE-------Ec---- Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKT---------KM---------------WYV-----VNT-G----GQQRV-------LK---- 173 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~---------~~---------------~~~-----~~~-~----~~~~~-------~~---- 173 (432) +|..+-+...+.+...... .. .|. +.. + |.... ++ T Consensus 150 ~a~~~~Pi~~d~~~~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~ 229 (499) T protein:vir:80 150 TADCMYPLSNDSENVDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVP 229 (499) T ss_pred cCCceEEEEecCCCeEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCcee Confidence 7776655332221110000 00 000 000 0 11110 00 Q ss_pred -----cceEEEEecCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE-----eCCCCC---HHH Q lcl|Aclame:pro 174 -----PEEILHFKNGIT----LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDLN---EDA 236 (432) Q Consensus 174 -----~~~vih~~~~~~----~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-----~~~~~~---~~~ 236 (432) .--++|++.+-+ .....|.|.+.-+...++..+.......+-++.+ ....++. ...+.+ ... T Consensus 230 ~~~~~~p~f~~~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~-~~~i~v~~~~l~~~~~~~g~~~~~ 308 (499) T protein:vir:80 230 LPSLTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGSTTQY 308 (499) T ss_pred ecCCCccceEeecCCccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhc-ccceecchhhhhccCCCCCCcccC Confidence 001456664322 2345799999988888887777766666667654 3333331 111100 000 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-- Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-- 314 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-- 314 (432) .+.-.+.+.. ..+ ..-+++-.++.++.....-++.+..+...++|....|+++..++....+.. +..+. T Consensus 309 ~~~~~~~~~~-~~~-------~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~-TAtei~s 379 (499) T protein:vir:80 309 FDSTDEAFFL-YQG-------EQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVS 379 (499) T ss_pred CCcccceeeE-eec-------cCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccch-hHHHHHH Confidence 0000000000 000 011223346667766666678888999999999999999999986554432 22221 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 315 -----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 383 (432) Q Consensus 315 -----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~ 383 (432) ....++.+|..++..|........+..........+.++++.-...|..+.++...+++.+|+|+...+ T Consensus 380 ~~~~l~~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~ 459 (499) T protein:vir:80 380 EKSETYQTKNSHSQLIEQGIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIA 459 (499) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 122223333344333332211100111112223456666677677899999999999999999999998 Q ss_pred HHHh-CCCCCCCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 384 RSKE-DLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 384 R~~~-gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) +..+ |.+. +..++.+.-..-......+..+..|-...++ T Consensus 460 l~~~~~~~d-~ea~~el~~i~~E~~~~~~~~d~~g~~ge~e 499 (499) T protein:vir:80 460 LQRAWNITE-AEADEWAEMLAKEKQAEIPNNDMTGIFGEEE 499 (499) T ss_pred HhhcCCCCh-HHHHHHHHHHHHHhhcCCCCCCccccCCCCC Confidence 7654 5442 1111111000000000111111111111111 No 159 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=98.94 E-value=7.8e-09 Score=65.05 Aligned_cols=398 Identities=12% Similarity=0.040 Sum_probs=169.9 Q ss_pred Cc-------hHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--cccccH----HH-HhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MK-------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKG----KN-ALKVATVFACIKILSESV 66 (432) Q Consensus 1 Mg-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~----~~-a~~~~~v~~~i~~ia~~i 66 (432) |. +++.|...+...... ...+..+.-.... ...... .. -........+|+..+..+ T Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~r----------~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l 77 (485) T protein:vir:10 8 QEEIEDPAIARDEMVSAFEDSTQN----------LKTNTSYYEAERRPEAIGVTVPIQMQSLLAHVGYPRLYVDSIAERQ 77 (485) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH----------HHHHHHHHhcCCcchhcCCCCChhhhhhhhhcCcHHHHHHHHHhhh Confidence 11 123332222111100 0001111100000 000000 00 011234455666666544 Q ss_pred ccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc-------eEEEEEEc Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-------VQALWPID 139 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~-------~~~l~~~~ 139 (432) --.+|.+ .++. ..+..+..++. + | ....+...+..+++.+|.||+.+.++..+. ...+.+++ T Consensus 78 ~~~g~~~---~~~~---~~~~~~~~i~~-~-N---~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~ 146 (485) T protein:vir:10 78 AVEGFRF---GDAD---EADEELWQWWQ-A-N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEP 146 (485) T ss_pred cccceec---CCCc---hhHHHHHHHHH-h-c---CHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEc Confidence 3333332 1111 11122333332 1 2 334677889999999999999988765432 22467788 Q ss_pred CcceEEEEcCccceeccceeEEEecccCce---EEEcc-------------------------ceEEEEecCCCCCcccc Q lcl|Aclame:pro 140 ASKVTVYIDDVGLLNSKTKMWYVVNTGGQQ---RVLKP-------------------------EEILHFKNGITLDGLVG 191 (432) Q Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------------~~vih~~~~~~~~~~~G 191 (432) |..+.++.|...........++....++.. ..+.+ --|++|.+.....+.+| T Consensus 147 p~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G 226 (485) T protein:vir:10 147 PTRMYAEIDPRIGRVSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYG 226 (485) T ss_pred cceeEEEEcCCCCceeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCC Confidence 888887776432111100111100011100 01111 13566665555556788 Q ss_pred cCHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH--HHHHHHHHHHhcccccccceeecC-CCceee Q lcl|Aclame:pro 192 VPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK--KVFRENFESMSSGLQNSHRIALMP-VGYQFQ 267 (432) Q Consensus 192 ~s~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~ 267 (432) .|-+.. +...++......-......+-.+.|..++.-... .+... ..-...|.. ..+.+..++ ++.++. T Consensus 227 ~s~i~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~~~-~~~~~~~~~~~~~~~~------~~~~i~~~~~~d~k~~ 299 (485) T protein:vir:10 227 TSEITPELRSMTDAAARILMLMQATAELMGVPQRLIFGIKP-EEIGVDPETGQTLFDA------YLARILAFEDAEGKIQ 299 (485) T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHhcCCc-ccccccccccchhhhh------cccceeccCCCCceEE Confidence 886543 2333333333222222222333344443331110 00000 000111111 123455554 567887 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH-------------HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 268 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ-------------QQQQFYTDTLQATLTMYEQEM 334 (432) Q Consensus 268 ~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~-------------~~~~~~~~~l~P~~~~i~~~l 334 (432) +++.+..+ -+++.++....+++..-++|+..+++... |.++.++ .....+...+..+++.+.. + T Consensus 300 q~~~~~~~-~~~~~l~~~i~~~~~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~-~ 376 (485) T protein:vir:10 300 QFSAAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAAD-NPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYR-M 376 (485) T ss_pred eecccchH-HHHHHHHHHHHHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H Confidence 77654433 37788888899999999999999875432 2112111 1122222333333332221 1 Q ss_pred HHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--Ccceeeecc---ccccc Q lcl|Aclame:pro 335 TYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLVNG---NMLPI 407 (432) Q Consensus 335 ~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~--~gd~~~~~~---n~~~~ 407 (432) ... .........+++.+..-...+..+.++++.+++++| +++..-+++.+|+.+.+ ...+...-. ....+ T Consensus 377 ~~~---~~~~~~~~~i~v~w~~~~~~~~~~~ada~~kl~~ag~~~~s~et~~~~lg~~~~~~~~~~~~~ee~~~~~~~~~ 453 (485) T protein:vir:10 377 MKG---GDVPPDMLRMETVWRDPSTPTYAAKADAASKLYNGGTGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLI 453 (485) T ss_pred hCC---CCCcccceeeeEEecCCCCCCHHHHHHHHHHHHhccccCCCHHHHHHhCCCCHhHHHHHHHHHHHHHHHHHHHH Confidence 110 000011124445555666788999999999999876 88888899999998642 111110000 00000 Q ss_pred cc-----cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 408 DM-----AGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 408 ~~-----~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +. .+.......+...+++.+.+-++ T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (485) T protein:vir:10 454 GTMVDPNPTVPGSPSPAPAPKPAALESGGD 483 (485) T ss_pred HHhhccCCCCCCCCCccccccCcCCCCCCC Confidence 00 00000000111111222222222 No 160 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.94 E-value=1e-08 Score=64.37 Aligned_cols=357 Identities=12% Similarity=0.053 Sum_probs=159.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--cccccH----HHH--hccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKG----KNA--LKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~----~~a--~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) .-++++|.+.+...... ......+...... ...++. ... +-.....-+|+.++..+.=-.|. T Consensus 3 ~~~i~~L~~~~~~~~~r----------~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~ 72 (409) T protein:vir:94 3 EKGIGYLRFKLSVHKRR----------AEMRYDQYAMKYVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFE 72 (409) T ss_pred HHHHHHHHHHHHHHhHH----------HHHHHHHhcccCchhhcChhhhHHHHHHHhhhcchhHHHHHHhHhhcccCccc Confidence 33444554433211100 0001111111100 001110 000 11233444555555532222221 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) . + +..+...+. + |. .......+..+.+++|.+|+.+..+.+|.+ .+.+++|..+..+.|.... T Consensus 73 ---~-~-------d~~l~~i~~-~-N~---ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~ 135 (409) T protein:vir:94 73 ---N-D-------DFTVNEIFE-E-NN---PDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITG 135 (409) T ss_pred ---C-C-------chHHHHHHH-h-cC---hhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCC Confidence 1 1 112333332 2 33 234556788899999999999998888865 6778899988888765321 Q ss_pred eeccceeEEEecccCce---EEEccc----------------------eEEEEecCCCCCcccccCHH-HHHHHHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQQ---RVLKPE----------------------EILHFKNGITLDGLVGVPTM-EYLKSTLENSA 206 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~----------------------~vih~~~~~~~~~~~G~s~~-~~~~~~~~~~~ 206 (432) .......+......+.. ..+.++ -|++|.+.......+|.|-| ..+...++... T Consensus 136 ~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~ 215 (409) T protein:vir:94 136 LLTEGYAVLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAK 215 (409) T ss_pred ceeeeEEEEEecCCCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHH Confidence 10000000000001100 011111 26666655555667898855 23333333333 Q ss_pred HHHHHHHHHHhccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHH Q lcl|Aclame:pro 207 SADKFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELT 285 (432) Q Consensus 207 ~~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~ 285 (432) ...-......+=.+.|.-++. .+.+. +..+.++......+.-+++.. +.+.++.+++.+.-+ .+++.++.. T Consensus 216 r~~~~~~~~~e~~a~pqr~i~G~d~d~--~~~~~~~~~~~~i~~~~~d~d-----g~~~~v~q~~~~~l~-~~~~~l~~~ 287 (409) T protein:vir:94 216 RTLERADVTAEFYSFPQKYVTGLSDDA--EPMETWKATVSSMLQFTKDED-----GDKPTLGQFTQPSMS-PFTEQLRTA 287 (409) T ss_pred HHHHHHHHHHHHhcChhheeEecCCCC--cccchhhhhHHHhhcCCCCCC-----CCCceEEecCCCChh-HHHHHHHHH Confidence 222222222222344544443 22221 122233322222221111110 134567666543322 478999999 Q ss_pred HHHHHHHhcCChhhccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccchh--hcchhhhhhhhh Q lcl|Aclame:pro 286 IRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK------LFLDSE--LDKGFYSKFNVD 355 (432) Q Consensus 286 ~~~I~~~~gvp~~~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~------ll~~~~--~~~~~~~~fd~~ 355 (432) ...+|..-++|+..+|+.... +.....++...+... ..-..+.+.+.+.+- +..... ......+++.+. T Consensus 288 ~~~~a~~t~lP~~~lg~~~~NpsSa~Al~a~~~~L~~~-a~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W~ 366 (409) T protein:vir:94 288 AAGFAGETGLTLDDLGFVSDNPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKWE 366 (409) T ss_pred HHHHhhhcCCCHHHhccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEec Confidence 999999999999999875432 111122222111111 111111111112111 111000 011112333334 Q ss_pred hhhhhh---HHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 356 AILRAD---IKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA 393 (432) Q Consensus 356 ~l~~~d---~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~ 393 (432) +....+ ..+.++++.|++++| +...+-+++++|+..-+ T Consensus 367 p~~~~~~~~~a~~aDa~~Kl~~ag~~~~~~~~~~~~lG~~~~d 409 (409) T protein:vir:94 367 PLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIEGGE 409 (409) T ss_pred cCCCcchHHHHHHHHHHHHHHHhcccccchhHHHHHcCCCCCC Confidence 333333 456678889999998 56668899999998765 No 161 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=98.93 E-value=8.9e-09 Score=64.72 Aligned_cols=401 Identities=12% Similarity=0.101 Sum_probs=187.4 Q ss_pred CchHHHHHHhccccc------cccc-----cccccCCchH-HHH---HhhcCCcCccc---c----cHHHHhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK------RQTS-----QVIELNKDDE-KLL---EWLGISPSTIS---V----KGKNALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~~~~------~~~~-----~~~~~~~~~~-~~~---~~~g~~~~~~~---v----~~~~a~~~~~v~~~ 58 (432) ||||++||++|...- .+.. ..+..+.... .+. .++........ . ..+..........+ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~~~y~g~~~~~~~~~~~~~~~~~~~~sln~~~~i 80 (508) T protein:vir:15 1 MGLIQRIKDLFWKGAAATGVTGSLSKITDDPRISIDPDEYVRIQTDLDYYSDKLQYIHYQASDGIKKKRLKNTINMAKTA 80 (508) T ss_pred CChHHHHHHHHHHHHHHhccccchHHhhcccccccCHHHHHHHHHHHHHhcCCCcccccccCCCCccccceeecchHHHH Confidence 999999999874211 1111 1111111111 111 22211111110 0 01111123455666 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..|+-+..-|..+.-.+++. .+..+..+|. -| .....++..+.+.+..|.+++.+..+..+ ..+..+ T Consensus 81 ~~~~A~lv~~e~~~i~v~~~~~----~~e~l~~il~--~n---~f~~~~~~~~e~a~a~G~~~~k~~~d~~~--~~i~~v 149 (508) T protein:vir:15 81 ARRIASVVFNEKAEIHVKDNNE----ADKFLNDVLE--DN---DFKNKFEEALEKGVALGGFAMRPYIDGNH--IKIAWV 149 (508) T ss_pred HHHHHhhhhCCCceEEeCCchH----HHHHHHHHHH--hc---cHHHHHHHHHHHHhhcCceEEEEEEeCCe--eEEEEE Confidence 6777776655454443222110 1111222221 12 22455667788889999999988776433 344555 Q ss_pred cCcceEEE-EcCccce-----------------ecc-------------ceeEEEeccc-----CceEEE---c------ Q lcl|Aclame:pro 139 DASKVTVY-IDDVGLL-----------------NSK-------------TKMWYVVNTG-----GQQRVL---K------ 173 (432) Q Consensus 139 ~~~~v~~~-~~~~~~~-----------------~~~-------------~~~~~~~~~~-----~~~~~~---~------ 173 (432) +|..+-+. .+..... .+. ...+..+... |....+ + T Consensus 150 ~ad~~~P~~~d~~~~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~ 229 (508) T protein:vir:15 150 RADQFYPLQSNTNDISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELA 229 (508) T ss_pred cCCeeEEEEEcCCCeEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCC Confidence 66655442 2221110 000 0000011111 111100 0 Q ss_pred c---------ceEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE---eCCCC-CHHH Q lcl|Aclame:pro 174 P---------EEILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ---YVGDL-NEDA 236 (432) Q Consensus 174 ~---------~~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~---~~~~~-~~~~ 236 (432) + --.+||+.+-+. ...+|.|.+.-+...++..+........-++ .+.+..++. ++.+. .... T Consensus 230 ~~~~~~g~~~p~f~y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~-~~~~~i~v~~~~l~~d~~~~~~ 308 (508) T protein:vir:15 230 PQVTISGLQRPLFAYFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIR-LGQKHIAVQPGMLRFDDEHKPT 308 (508) T ss_pred cceEecCCCcceeEEecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHH-hcccceeechHHhcCCCCCccc Confidence 0 013455543222 3467999999999888888777777777775 444544442 11111 1100 Q ss_pred HHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-- Q lcl|Aclame:pro 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-- 314 (432) Q Consensus 237 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-- 314 (432) .+.- .+.|.+.. .-.++|..++.++....+-++.+..+...+.+....|+++..++....+.. +..+. T Consensus 309 ~~~~----~~~~~~~~-----~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~-TAtei~s 378 (508) T protein:vir:15 309 FDTE----QNVYVGVL-----SDDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVK-TATEVVS 378 (508) T ss_pred cCCC----CeeEEecc-----CCCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccc-cHHHHHH Confidence 0000 00011000 001234567777777777888999999999999999999999986654433 22221 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhccch--------hhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhC Q lcl|Aclame:pro 315 -----------QQQFYTDTLQATLTMYEQEMTYKLFLDS--------ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG 375 (432) Q Consensus 315 -----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~--------~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~ 375 (432) ....++.+|..++..|.......-+... .....+.+.|++++-...|..+.++...+++.+ T Consensus 379 ~~~~~~~t~~~~~~~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~a 458 (508) T protein:vir:15 379 NNSMTYQTRSSYLTMVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAI 458 (508) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhc Confidence 1223334444444444332211101110 111234566777777788999999999999999 Q ss_pred CCcCHHHHHHHh-CCCCCCCcceeeecccccccccc-ccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 376 GFLKPNEARSKE-DLPPEAGGDRLLVNGNMLPIDMA-GQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 376 g~~t~nE~R~~~-gl~p~~~gd~~~~~~n~~~~~~~-~~~~~~gg~~~~~~~~~~~e~~ 432 (432) |+|+..+++.++ |++.- ..++- +..+..- ......++ ...+..+++|- T Consensus 459 Gi~s~e~~i~~~~g~~de-ea~~e-----l~ri~~E~~~~~~~~~---~~~~~~g~~ge 508 (508) T protein:vir:15 459 GALSKQTFLQRNYGMTDE-QAAEE-----LAKIQSEAPTDTFEGG---RSAILNGGDGE 508 (508) T ss_pred CCCCHHHHHHhcCCCChH-HHHHH-----HHHHHHhccccCcccc---ccccCCCCCCC Confidence 999999987654 65432 11111 0000000 00000000 01111111111 No 162 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=98.92 E-value=3.3e-09 Score=67.08 Aligned_cols=406 Identities=11% Similarity=0.068 Sum_probs=166.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCC- Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEY- 79 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~- 79 (432) +.+++.|...+...................+ ..++....... ...-........+|+.+++.+---.|.+-..... T Consensus 10 ~~~i~~L~~~~~~~~~r~~~~~~Yy~g~~~i-~~~~~~~~~~~--~~~~~~~n~~~~ivd~~a~~l~~~Gf~~~~~~~~~ 86 (488) T protein:vir:23 10 EKLRDQLLDAFENKQNELKSSKAYYDAERRP-DAIGLAVPLDM--RKYLAHVGYPRTYVDAIAERQELEGFRIPSANGEE 86 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccch-hhcCcccchhh--hhhhhhcchHHHHHHHHHHhhhccceeccCCcccc Confidence 4444444433321110000000000000000 00011000000 0000123445566666665443334444221111 Q ss_pred ---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC-------ceEEEEEEcCcceEEEEcC Q lcl|Aclame:pro 80 ---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-------KVQALWPIDASKVTVYIDD 149 (432) Q Consensus 80 ---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g-------~~~~l~~~~~~~v~~~~~~ 149 (432) +........+..++. -| ........+..+++.+|.||+.+.++... ....+.+++|..+.++.+. T Consensus 87 ~~~~~d~~~~~~l~~i~~--~N---~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~d~ 161 (488) T protein:vir:23 87 PESGGENDPASELWDWWQ--AN---NLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEVPLIRVEPPTALYAEVDP 161 (488) T ss_pred cccccchhHHHHHHHHHH--hc---ChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCcceEEEeccceeEEEEec Confidence 001111122333332 12 34566778899999999999987654311 1124667788887777664 Q ss_pred ccceeccceeEEEecccCce---EEEcc-------------------------ceEEEEecCCCCCcccccCHHHH-HHH Q lcl|Aclame:pro 150 VGLLNSKTKMWYVVNTGGQQ---RVLKP-------------------------EEILHFKNGITLDGLVGVPTMEY-LKS 200 (432) Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------------~~vih~~~~~~~~~~~G~s~~~~-~~~ 200 (432) ..........++....++.. ..+.+ =-|++|++.......+|.|-+.. +.. T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~ 241 (488) T protein:vir:23 162 RTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSEISPELRS 241 (488) T ss_pred CCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccchhhhHHH Confidence 21111111111110111100 01111 12677776655566788886642 223 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHH--HHHHHHHHHHhcccccccceeecCCC--ceeeecCCChhHH Q lcl|Aclame:pro 201 TLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAK--KVFRENFESMSSGLQNSHRIALMPVG--YQFQPISLNMSDA 276 (432) Q Consensus 201 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~n~g~~~vl~~g--~~~~~~~~~~~d~ 276 (432) .++......-.......-.+.|..++.-- ...+... ..-...|.. ..+++..+++| .++.++..+..+ T Consensus 242 l~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~------~~~~v~~~~~g~~~~~~q~~~~~~~- 313 (488) T protein:vir:23 242 VTDAAAQILMNMQGTANLMAIPQRLIFGA-KPEELGINAETGQRMFDA------YMARILAFEGGEGAHAEQFSAAELR- 313 (488) T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhCC-Ccccccccccccchhhhh------hhhhhccCCCCCCceeEecCCCChH- Confidence 33332222222222222222333333210 0011000 000111111 12345566655 566666554433 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccchh Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-------------QQQFYTDTLQATLTMYEQEMTYKLFLDSE 343 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~ 343 (432) .+++.++....+|+..-++|+..+++... |.++.+++ ....+...+.-+++.+...++ ... T Consensus 314 ~~~~~l~~~i~~~~~~~~~p~~~~g~~~~-n~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~-----~~~ 387 (488) T protein:vir:23 314 NFVDALDALDRKAASYSGLPPQYLSSSSD-NPASAEAIKAAESRLVKKVERKNKIFGGAWEQAMRLAYKMVK-----GGD 387 (488) T ss_pred HHHHHHHHHHHHHhcccCCCHHHhccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCC Confidence 37788888999999999999999876432 21122221 122222233333333322111 100 Q ss_pred h-cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--Ccceeeec------ccccccccc-- Q lcl|Aclame:pro 344 L-DKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLVN------GNMLPIDMA-- 410 (432) Q Consensus 344 ~-~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~--~gd~~~~~------~n~~~~~~~-- 410 (432) . .....+++.+..-...+..+.++.+.+++++| +++..-+++++|+-+.+ ..+..... ..+..+... T Consensus 388 ~~~~~~~i~v~f~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (488) T protein:vir:23 388 IPTEYYRMETVWRDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDMGYTIVEREQMRQWLEQDQKQGLGLIGSLYGAST 467 (488) T ss_pred cchhhccceEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC Confidence 0 01123334444555678888899999998866 78888889999886542 11111000 000000000 Q ss_pred ---ccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 411 ---GQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 411 ---~~~~~~gg~~~~~~~~~~ 428 (432) ..++.+.|+..++.+..+ T Consensus 468 ~~~~~~~~~~~~~~~~e~~~a 488 (488) T protein:vir:23 468 PEGKPGEAPVGEPPAPEPDAA 488 (488) T ss_pred CcccCCCCCCCCCCCCCCCCC Confidence 001111122222222222 No 163 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=98.91 E-value=7.6e-09 Score=65.09 Aligned_cols=402 Identities=13% Similarity=0.094 Sum_probs=181.2 Q ss_pred hHHHH----HHhccccc--ccccc---ccccCCch---HH---HHHhhcCCcCccc-----cc----HHHHhccHHHHHH Q lcl|Aclame:pro 3 IVDSV----KKFFNFEK--RQTSQ---VIELNKDD---EK---LLEWLGISPSTIS-----VK----GKNALKVATVFAC 58 (432) Q Consensus 3 ~~~~l----~~~~~~~~--~~~~~---~~~~~~~~---~~---~~~~~g~~~~~~~-----v~----~~~a~~~~~v~~~ 58 (432) ||++| |.+++... +.... ........ .. ...++........ .. ....+.......+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~~~~~~~~~~~~~~~~~~~~~~~n~~k~i 80 (496) T protein:vir:38 1 MINQIIAGVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVT 80 (496) T ss_pred ChhHHHHHHHHHHHHhccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCCchhhcchhccCCCccccceeecchHHHH Confidence 44444 33333211 11000 01111111 11 1122211111000 00 0111234556777 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..|+.+..-|..+.-.+ ......|+ +-...-........++.+.+..|.+|+.+..+.+|.+ .+..+ T Consensus 81 ~~~~a~~l~~~p~~i~~~d---------~~~~e~l~-~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v 149 (496) T protein:vir:38 81 AKYMSKLLFNEKVKINIDD---------KAAEEFVL-NVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFA 149 (496) T ss_pred HHHHhhhhhCCcceEeeCC---------hHHHHHHH-HHHhccCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcE-EEEEE Confidence 8888888877777654322 12222232 1111223456677889999999999999998877764 35667 Q ss_pred cCcceEEEEcCccceeccc---------eeE-----------------EEecc-c----CceEE-------E-------- Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLNSKT---------KMW-----------------YVVNT-G----GQQRV-------L-------- 172 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~~~~---------~~~-----------------~~~~~-~----~~~~~-------~-------- 172 (432) +|..+-+...+........ ..+ ..+.. + |..+. + T Consensus 150 ~~~~~~P~~~~~~~~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 229 (496) T protein:vir:38 150 TADCMYPLSNDSENVDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPD 229 (496) T ss_pred cccceEEEEecCCcEEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecC Confidence 7776665433322111000 000 00000 0 11000 0 Q ss_pred -ccceEEEEecCC----CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEE-----eCCCCCHHHHHHHHH Q lcl|Aclame:pro 173 -KPEEILHFKNGI----TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQ-----YVGDLNEDAKKVFRE 242 (432) Q Consensus 173 -~~~~vih~~~~~----~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (432) +.--+.|++.+- .....+|.|.+.-+...++..+.......+-++. +.+..++. .......+.. . T Consensus 230 ~~~~~f~~~~~~~~N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~-~~~~i~v~~~~l~~~~~~~g~~~----~ 304 (496) T protein:vir:38 230 FTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKL-GKKKVLVPSSFVKTAVNLDGSTT----Q 304 (496) T ss_pred CCcceEEEecCCcccccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhh-cccceecchHHhhccCCCCCccc----c Confidence 001133444321 2234679999998888888776666555555654 34433331 0000000000 0 Q ss_pred HHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHH-------- Q lcl|Aclame:pro 243 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-------- 314 (432) Q Consensus 243 ~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-------- 314 (432) .+.....-- -.....-.+++..++.++.....-++.+..+...+.|+...|+||..++....+.. +..+. T Consensus 305 ~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~-tAtei~~~~~~l~ 382 (496) T protein:vir:38 305 YFDSTDEAF-FLYQGDQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSETY 382 (496) T ss_pred CCCCccceE-EEeecCCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccc-hHHHHHHHHHHHH Confidence 000000000 00000111233456666666666678888999999999999999999986544332 22221 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh-C Q lcl|Aclame:pro 315 -----QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE-D 388 (432) Q Consensus 315 -----~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~-g 388 (432) ....++.+|..+++.+.+..............+..+.|.++.-...|..+.++.+.+++.+|+|+...++..+ | T Consensus 383 ~~~~~~~~~~~~~l~~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~~~ 462 (496) T protein:vir:38 383 QTKNSHSQLIEQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRAWN 462 (496) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCC Confidence 1222334444444444432211111111112234456666666778889999999999999999988887654 4 Q ss_pred CCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 389 LPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 389 l~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+.. ...+-+ ..+..-.+...+..+.. +.++|.. T Consensus 463 ~~d~-ea~~el-----~ri~~E~~~~~~~~d~~----~~~~~~e 496 (496) T protein:vir:38 463 ITEA-EADEWA-----EMLAKEKQAEMPNNDMN----GIFGEEE 496 (496) T ss_pred CChH-HHHHHH-----HHHHHhhhccCcccccc----CCCCCCC Confidence 4321 111110 00100000000000000 0000000 No 164 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.89 E-value=1.2e-09 Score=69.51 Aligned_cols=384 Identities=11% Similarity=0.033 Sum_probs=171.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC------cccccH---HHHhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS------TISVKG---KNALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~v~~---~~a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) +-++.+|...+...... ...+..+.-.... ..+-.. ...........+|+..++.+-.-|| T Consensus 7 ~~~~~~l~~~~~~~~~r----------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~ 76 (456) T protein:vir:79 7 AEWLPVLTKRIDDGMSR----------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGI 76 (456) T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHhccCChhhcCcccChhhchhhhhhhcchHHHHHHHHHhhhccCCe Confidence 33333332222100000 0000111100000 000000 0111234567788888888877888 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) .+...+ +.. ....+..++.. | ....+...++.+++.+|.||+.+..+.+|.+ .+..++|..+.+..++.. T Consensus 77 ~~~~~~-d~~---~~~~~~~~~~~--n---~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~ 146 (456) T protein:vir:79 77 TVGGSA-DSD---LALRARRIWRD--N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQ 146 (456) T ss_pred ecCCCC-Ccc---HHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCC Confidence 754222 111 11123344432 3 2345667899999999999999888888876 577888998888876532 Q ss_pred ceecc-ceeEEE-----------ecccCceE----------------E------EccceEEEEecC---CCCCcccccCH Q lcl|Aclame:pro 152 LLNSK-TKMWYV-----------VNTGGQQR----------------V------LKPEEILHFKNG---ITLDGLVGVPT 194 (432) Q Consensus 152 ~~~~~-~~~~~~-----------~~~~~~~~----------------~------~~~~~vih~~~~---~~~~~~~G~s~ 194 (432) ..... ...++. +..++... . ....++-|.-.. -+.....|.|- T Consensus 147 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd 226 (456) T protein:vir:79 147 PWRIRSAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGE 226 (456) T ss_pred CCceEEEEEEEEecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCch Confidence 11110 000110 00000000 0 000000000000 00122457777 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC---CCHHHHH--HHHHHHHHHhcccccccceeecCCCceeeec Q lcl|Aclame:pro 195 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKK--VFRENFESMSSGLQNSHRIALMPVGYQFQPI 269 (432) Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~ 269 (432) +..+...++......-.........+.|..++.-... ..++.-+ ...+.|.. ..+.+..++++.++.++ T Consensus 227 ~e~v~~liD~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~------~~~~~~~~~~~~~~~q~ 300 (456) T protein:vir:79 227 VEPHIDIINRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEA------APGALWELPPGVDIWES 300 (456) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhh------hccccccCCCCcceeee Confidence 7766555554443322222222222233222221110 0111111 11122222 12445667888888877 Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc-cccccHHHHH----------HHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 270 SLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATLNNIEQQQ----------QQFYTDTLQATLTMYEQEMTYKL 338 (432) Q Consensus 270 ~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~-~~~~~~~~~~----------~~~~~~~l~P~~~~i~~~l~~~l 338 (432) ..+..+ .+.+.++....+|+..-++|+..+++... .++....... ...+...+..+++.+.. + T Consensus 301 ~~~~~~-~~~~~l~~~i~~i~~~t~~p~~~~~~~~~N~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~-----~ 374 (456) T protein:vir:79 301 QTNDFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSANQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKALQ-----I 374 (456) T ss_pred cccChH-HHHHHHHHHHHHHHhhcCCChhHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h Confidence 654332 37788999999999999999999976432 2222122211 11222222222222211 1 Q ss_pred ccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC----Ccceeeecccccccccccccc Q lcl|Aclame:pro 339 FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAY 414 (432) Q Consensus 339 l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~----~gd~~~~~~n~~~~~~~~~~~ 414 (432) ... .....++..+.+....+..+.++++.+++.+|+++..-+++++|+.+.+ ..++.....+. ..... T Consensus 375 ~g~---~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~G~~~~~~~~~~lg~~~~~i~~~e~~r~~~e~~~-----~~~~~ 446 (456) T protein:vir:79 375 EGE---SVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQITL-----FAGNP 446 (456) T ss_pred cCC---CccccceEEeCCCCCcCHHHHHHHHHHHHhcCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-----HhhhH Confidence 111 1112334444555677888999999999999999888888889987631 11111000000 00000 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 415 LKGGDTNGEVSK 426 (432) Q Consensus 415 ~~gg~~~~~~~~ 426 (432) .+.+ +++.+. T Consensus 447 ~~~~--~~~~~~ 456 (456) T protein:vir:79 447 VQRP--QEDGSR 456 (456) T ss_pred hhcC--CCCCCC Confidence 0000 001111 No 165 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.87 E-value=1.4e-09 Score=69.19 Aligned_cols=385 Identities=9% Similarity=0.004 Sum_probs=175.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--ccccc----HHH---HhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVK----GKN---ALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~----~~~---a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) ..++++|...+...... ...+..+..+... ..+.. .+. -..+....-+|+..+..+-.-|| T Consensus 7 ~~~~~~l~~~~~~~~~r----------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~ 76 (456) T protein:vir:10 7 AEWLPVLTKRIDDGMSR----------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGI 76 (456) T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCe Confidence 33333333322111000 0001111111000 00000 001 12245667788888888878888 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) .+...+ +.. ....+..++. + | ....+...++.+++.+|.+|..+..+..|.+ .+..++|..+.++.|... T Consensus 77 ~~~~~~-d~~---~~~~~~~i~~-~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~ 146 (456) T protein:vir:10 77 TVGGSA-DSD---LALRARRIWR-D-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQ 146 (456) T ss_pred ecCCCC-Ccc---hHHHHHHHHH-h-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCC Confidence 764322 111 1112333332 2 3 2345566788999999999999888888865 467788988888877543 Q ss_pred ceeccceeEEEecccCce----------------------------EEEccc------------eEEEEecCCCCCcccc Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQ----------------------------RVLKPE------------EILHFKNGITLDGLVG 191 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~----------------------------~~~~~~------------~vih~~~~~~~~~~~G 191 (432) .........+....++.. ...... .++.+. +.....| T Consensus 147 ~~~~~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv---~~~N~~g 223 (456) T protein:vir:10 147 PWRIRAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVV---VYQNPDG 223 (456) T ss_pred CcceEEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEE---EecCCCC Confidence 111111100000000000 000000 011111 0122367 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC---CCHHHHHH--HHHHHHHHhcccccccceeecCCCcee Q lcl|Aclame:pro 192 VPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKKV--FRENFESMSSGLQNSHRIALMPVGYQF 266 (432) Q Consensus 192 ~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~g~~n~g~~~vl~~g~~~ 266 (432) .|-++.....++....+.--........+.|..++.-... ..++.-+. ..+.|.. ..+.+..++++.++ T Consensus 224 ~gd~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~ 297 (456) T protein:vir:10 224 MGEVEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDI 297 (456) T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcce Confidence 8877776666665554443333333333333333322111 01111111 1122222 12446667889998 Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------c Q lcl|Aclame:pro 267 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL-------F 339 (432) Q Consensus 267 ~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l-------l 339 (432) .+++....+ .+.+.++....+|+..-++|+..+++... |. +.++ ..+....+.--+...+..|...+ + T Consensus 298 ~q~~~~~~~-~~~~~l~~~i~~~~~~s~~p~~~~~~~~~-N~-Sg~A--i~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~ 372 (456) T protein:vir:10 298 WESQANDFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSA-NQ-SAEG--AHNIEKGFLFKCEDRLSIAKIGLEAILVKAL 372 (456) T ss_pred EEecccChh-HHHHHHHHHHHHHHhccCCChHHhccccc-Ch-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 887654322 37788999999999999999999976432 11 1111 11111122222222222221111 0 Q ss_pred cchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC----CcceeeeccccccccccccccC Q lcl|Aclame:pro 340 LDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAYL 415 (432) Q Consensus 340 ~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~----~gd~~~~~~n~~~~~~~~~~~~ 415 (432) .-........+++.+......+..+.++++.++.+.|+++..-+++++|+.+.+ ..++.....+. ...... T Consensus 373 ~~~g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~~e~~~-----~~~~~~ 447 (456) T protein:vir:10 373 QIEGESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQITL-----FAGNPV 447 (456) T ss_pred HhcCCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHHHHHHH-----Hhhhhh Confidence 000011112334444555677888999999999999999888888899987631 11111100000 000000 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 416 KGGDTNGEVSK 426 (432) Q Consensus 416 ~gg~~~~~~~~ 426 (432) +.++ .+.+. T Consensus 448 ~~~~--~~~~~ 456 (456) T protein:vir:10 448 QRPQ--EDGSR 456 (456) T ss_pred hcCC--CCCCC Confidence 0000 00111 No 166 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.87 E-value=1.4e-09 Score=69.19 Aligned_cols=385 Identities=9% Similarity=0.004 Sum_probs=175.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--ccccc----HHH---HhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVK----GKN---ALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~----~~~---a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) ..++++|...+...... ...+..+..+... ..+.. .+. -..+....-+|+..+..+-.-|| T Consensus 7 ~~~~~~l~~~~~~~~~r----------~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~ 76 (456) T protein:vir:10 7 AEWLPVLTKRIDDGMSR----------VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGI 76 (456) T ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCe Confidence 33333333322111000 0001111111000 00000 001 12245667788888888878888 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) .+...+ +.. ....+..++. + | ....+...++.+++.+|.+|..+..+..|.+ .+..++|..+.++.|... T Consensus 77 ~~~~~~-d~~---~~~~~~~i~~-~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~ 146 (456) T protein:vir:10 77 TVGGSA-DSD---LALRARRIWR-D-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQ 146 (456) T ss_pred ecCCCC-Ccc---hHHHHHHHHH-h-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCC Confidence 764322 111 1112333332 2 3 2345566788999999999999888888865 467788988888877543 Q ss_pred ceeccceeEEEecccCce----------------------------EEEccc------------eEEEEecCCCCCcccc Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQ----------------------------RVLKPE------------EILHFKNGITLDGLVG 191 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~----------------------------~~~~~~------------~vih~~~~~~~~~~~G 191 (432) .........+....++.. ...... .++.+. +.....| T Consensus 147 ~~~~~~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv---~~~N~~g 223 (456) T protein:vir:10 147 PWRIRAAMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVV---VYQNPDG 223 (456) T ss_pred CcceEEEEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEE---EecCCCC Confidence 111111100000000000 000000 011111 0122367 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC---CCHHHHHH--HHHHHHHHhcccccccceeecCCCcee Q lcl|Aclame:pro 192 VPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---LNEDAKKV--FRENFESMSSGLQNSHRIALMPVGYQF 266 (432) Q Consensus 192 ~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~g~~n~g~~~vl~~g~~~ 266 (432) .|-++.....++....+.--........+.|..++.-... ..++.-+. ..+.|.. ..+.+..++++.++ T Consensus 224 ~gd~e~vi~liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~------~~~~~~~~~~~~~~ 297 (456) T protein:vir:10 224 MGEVEPHIDIINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA------APGALWELPPGVDI 297 (456) T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh------hccccccCCCCcce Confidence 8877776666665554443333333333333333322111 01111111 1122222 12446667889998 Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------c Q lcl|Aclame:pro 267 QPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL-------F 339 (432) Q Consensus 267 ~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l-------l 339 (432) .+++....+ .+.+.++....+|+..-++|+..+++... |. +.++ ..+....+.--+...+..|...+ + T Consensus 298 ~q~~~~~~~-~~~~~l~~~i~~~~~~s~~p~~~~~~~~~-N~-Sg~A--i~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~ 372 (456) T protein:vir:10 298 WESQANDFT-PMLSAIKEHIRQLSSATKTPLPMLMPDSA-NQ-SAEG--AHNIEKGFLFKCEDRLSIAKIGLEAILVKAL 372 (456) T ss_pred EEecccChh-HHHHHHHHHHHHHHhccCCChHHhccccc-Ch-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 887654322 37788999999999999999999976432 11 1111 11111122222222222221111 0 Q ss_pred cchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC----CcceeeeccccccccccccccC Q lcl|Aclame:pro 340 LDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLPIDMAGQAYL 415 (432) Q Consensus 340 ~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~----~gd~~~~~~n~~~~~~~~~~~~ 415 (432) .-........+++.+......+..+.++++.++.+.|+++..-+++++|+.+.+ ..++.....+. ...... T Consensus 373 ~~~g~~~~~~~~v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~~e~er~~~e~~~-----~~~~~~ 447 (456) T protein:vir:10 373 QIEGESVEDTVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQDDLDRAREQITL-----FAGNPV 447 (456) T ss_pred HhcCCCcccceeEEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHHHHHHHHHHHHHH-----Hhhhhh Confidence 000011112334444555677888999999999999999888888899987631 11111100000 000000 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 416 KGGDTNGEVSK 426 (432) Q Consensus 416 ~gg~~~~~~~~ 426 (432) +.++ .+.+. T Consensus 448 ~~~~--~~~~~ 456 (456) T protein:vir:10 448 QRPQ--EDGSR 456 (456) T ss_pred hcCC--CCCCC Confidence 0000 00111 No 167 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.86 E-value=1.2e-08 Score=63.92 Aligned_cols=391 Identities=10% Similarity=0.010 Sum_probs=169.0 Q ss_pred CchHH-HHHHhccccccccccccccCCchHHHHHhhcCCcC------cccccHHHHh----ccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVD-SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS------TISVKGKNAL----KVATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~v~~~~a~----~~~~v~~~i~~ia~~ia~~ 69 (432) ..++. +|.+.+.... .....+..++-.... .........+ .+.....+|+..++.+--. T Consensus 15 ~~~~~~~l~~~~~~~~----------~r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd~~~~~l~~~ 84 (479) T protein:vir:99 15 AKYLETKVFPKMNTEC----------ERLDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVNSFAQQLIVD 84 (479) T ss_pred HHHHHHHHHHHHHHHh----------HHHHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHHHHHhhcccc Confidence 11000 0100000000 000000111100000 0000011111 2334555666666644333 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee-----CCCCceEEEEEEcCcceE Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF-----DRKGKVQALWPIDASKVT 144 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~-----~~~g~~~~l~~~~~~~v~ 144 (432) .|.+ .+ +. ....+..++.. |. .......++.+++.+|.+|+++-+ +..|.+ .+..++|..+. T Consensus 85 gf~~---~d-~~---~~~~~~~i~~~--N~---~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~~~~ 151 (479) T protein:vir:99 85 GYRK---TG-TN---ENAKGWDTWRL--NQ---MDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPRDAF 151 (479) T ss_pred cccC---CC-ch---hhHHHHHHHHh--cC---hhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechhheE Confidence 3322 11 11 11234444432 32 235667788999999999998764 233433 46677888888 Q ss_pred EEEcCccceeccceeEEEec------------------ccCceEE-------EccceEEEEecCCCCCcccccCHHHHHH Q lcl|Aclame:pro 145 VYIDDVGLLNSKTKMWYVVN------------------TGGQQRV-------LKPEEILHFKNGITLDGLVGVPTMEYLK 199 (432) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-------~~~~~vih~~~~~~~~~~~G~s~~~~~~ 199 (432) ++.++..... ...+.+.+. .++.... +..--|++|+++... ..+|.|-+..+. T Consensus 152 ~iydd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~-~~~g~sd~e~v~ 229 (479) T protein:vir:99 152 AIWEDPYWDE-WPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDL-RGVCYGDVEPLV 229 (479) T ss_pred EEecCCcccc-eeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCc-CcCCcchhHHHH Confidence 7765432111 001111111 1111111 111126777754333 347999888777 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccce-eecCCCceeeecCCChhHHHH Q lcl|Aclame:pro 200 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRI-ALMPVGYQFQPISLNMSDAQF 278 (432) Q Consensus 200 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~-~vl~~g~~~~~~~~~~~d~~~ 278 (432) ..++.............+-.+.|..++.-......+..+ ...+.- ..+++ ...+++.++.+++.... ..+ T Consensus 230 ~liDa~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~q~~~~~~-~~~ 300 (479) T protein:vir:99 230 TVAKAIDKTGLDILLVQHHQSFQIRWATGLMLPEGANAD--QEKMRF------AQESMLISQNEKASFGAIPAAPL-DGL 300 (479) T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhcCCCcccccccc--hhcccc------ccccceeecCCCceEEEecccch-HHH Confidence 777766666555555555556665555432111111111 011111 11223 33456677777654322 236 Q ss_pred HHHHHHHHHHHHHHhcCChhhccCccccccccHHHH----------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh Q lcl|Aclame:pro 279 LENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ----------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF 348 (432) Q Consensus 279 ~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~----------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~ 348 (432) ++.++....+|+.+=++|+..+|..++.+....... ....+...+..+++.+..-. ........+ T Consensus 301 ~~~l~~~i~~i~~~t~~p~~~~g~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~-----~~~~~~~~~ 375 (479) T protein:vir:99 301 LNAYKESLLEFLALAQLPPHIAGQIVNVAADALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIE-----GRTEEATDL 375 (479) T ss_pred HHHHHHHHHHHhccCCCCHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCccccce Confidence 677888888999999999999875433222121111 11222223333333322111 111111112 Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCcceee-----e---ccccccc-cc---cccccC Q lcl|Aclame:pro 349 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE-DLPPEAGGDRLL-----V---NGNMLPI-DM---AGQAYL 415 (432) Q Consensus 349 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~-gl~p~~~gd~~~-----~---~~n~~~~-~~---~~~~~~ 415 (432) .+.+.+......+..+.++.+.+++++|+++...+.+++ |+.+.. -+... . ..-...+ .. ..+... T Consensus 376 ~i~~~w~~~~~~s~~~~ad~~~kl~~ag~is~et~l~~l~gv~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479) T protein:vir:99 376 DFTITWQDVTIQSLAQFADAWAKMVESLKIPAEGVWDMIPNLDQST-VNGWKEIYDREGDFGKYMRKLQNGPDPAEQRGG 454 (479) T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcccCcccccCC Confidence 333333444566888899999999999999988888877 776421 01000 0 0000000 00 001111 Q ss_pred CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 416 KGGDTNGEVSKEGNEGN 432 (432) Q Consensus 416 ~gg~~~~~~~~~~~e~~ 432 (432) ..+..+.+ +.....|. T Consensus 455 ~~~~~~~~-~~~~~~~~ 470 (479) T protein:vir:99 455 PNGATNMQ-QANNKTGE 470 (479) T ss_pred CCCCCCCC-CCCCCCcc Confidence 11111111 11111222 No 168 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=98.85 E-value=8.9e-09 Score=64.71 Aligned_cols=398 Identities=6% Similarity=-0.078 Sum_probs=171.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc--CcccccH----HHH-hccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKG----KNA-LKVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~~----~~a-~~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) +-++.+|.+.+...+.. ......+..... ...+++. +.. ....+..-||+.+++.+---.|.+ T Consensus 17 ~~~~~~L~~~~~~~~~~----------~~~~~~Yy~G~~~~~~~~~~~p~~~r~~~~v~nw~~~~Vd~~a~rl~~~Gf~~ 86 (474) T protein:vir:81 17 NALINGLLAQIENLRWK----------NLLRTSYYENKRTIQYVGTLIPPQYFNLGLVLGWTGKAVDALARRCNLEGFVW 86 (474) T ss_pred HHHHHHHHHHHHHHhhH----------HHHHHHHhccCCChhhccccccHHHHHHHhhcChHHHHHHHHHhhhcccceEC Confidence 33344333332211100 000011111110 0011111 110 123444556666666544444443 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce-EEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-QALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~-~~l~~~~~~~v~~~~~~~~~ 152 (432) - ++.. .+..+...+. -|.. ......+..+.+.+|.+|+.+..+.+|.+ ..+.+++|..+....|.... T Consensus 87 ~----d~~~--~~~~l~~iw~--~N~l---d~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~~~~~~D~~~~ 155 (474) T protein:vir:81 87 P----DGDL--DSLGGTEVVD--DNHL---LSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASEATGEWNRRRR 155 (474) T ss_pred C----CCCc--cchHHHHHHH--hcCh---hHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceEEEEEeCCCC Confidence 1 1111 1122333332 2332 24566778899999999999988777764 45778899988887764321 Q ss_pred eeccceeEEEecccCce---EEEccc-------------------------eEEEEecCCCCCcccccCHHH-HHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQQ---RVLKPE-------------------------EILHFKNGITLDGLVGVPTME-YLKSTLE 203 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~-------------------------~vih~~~~~~~~~~~G~s~~~-~~~~~~~ 203 (432) ........+....+|.. ..|.++ -|++|.+.......+|.|.+. .+...++ T Consensus 156 ~~~~al~~~~~~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l~d 235 (474) T protein:vir:81 156 GLNNLLSIIDKDKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGLQD 235 (474) T ss_pred cceeeeEEEEEcCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHHHH Confidence 11111111111111111 011111 156666555555668888542 3323333 Q ss_pred HHHHHHHHHHHHHhccCCcceEEEe-CCC-CCH---HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHH Q lcl|Aclame:pro 204 NSASADKFINNFYKQGLQVKGLVQY-VGD-LNE---DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQF 278 (432) Q Consensus 204 ~~~~~~~~~~~~~~n~~~~~~~~~~-~~~-~~~---~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~ 278 (432) ......-......+-.+.|.-++.- ... ..+ .....++..+...+.-..+..+-.....+.++.++..+.-+ -+ T Consensus 236 a~~r~~~~~~~~~e~~a~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~~~q~~~a~l~-~~ 314 (474) T protein:vir:81 236 AGVRELARREGHMDVFSYPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARADVKQFPAASPD-AH 314 (474) T ss_pred HHHHHHHHHHHHHHHhcchhheeecCChhhcccccccccchhhhhHHHHhcCCCcccccccccccccccccCCCChh-HH Confidence 2222222222222222444444432 111 111 11223333333333222222222222345677776654322 37 Q ss_pred HHHHHHHHHHHHHHhcCChhhccCccccccccHHHH---HHHHHHHHHHHHHHHHHHHHHHhhccchh----------hc Q lcl|Aclame:pro 279 LENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ---QQQFYTDTLQATLTMYEQEMTYKLFLDSE----------LD 345 (432) Q Consensus 279 ~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~---~~~~~~~~l~P~~~~i~~~l~~~ll~~~~----------~~ 345 (432) ++.++.....+|..-++|+..||.....|-++.+.. ...+... +.-..+.+...+.+.+-.... .. T Consensus 315 ~~~l~~~~~~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~~~l~~k-ae~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~ 393 (474) T protein:vir:81 315 WSDINGLAKLFAREASLPDTAVAISGLSNPTSAESYDASQYELIAE-AEGAVDDFTPALRKAFIRALAMKNKVAIDEIPD 393 (474) T ss_pred HHHHHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCccccch Confidence 889999999999999999999985433332222222 2222111 122222222222211110000 01 Q ss_pred chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCC--cCHHHHHHHhCCCCCC---CcceeeeccccccccccccccCCCCCC Q lcl|Aclame:pro 346 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGF--LKPNEARSKEDLPPEA---GGDRLLVNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 346 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~--~t~nE~R~~~gl~p~~---~gd~~~~~~n~~~~~~~~~~~~~gg~~ 420 (432) ....+++.+.+....+..+.++++.|++++|. .+..=+++++|+.+.+ ..+.........+++..-+.... + . T Consensus 394 ~~~~~~v~W~d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~t~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~-~ 471 (474) T protein:vir:81 394 EWKSIDAKWRDPRYLSKSAQADAGMKQLAAVPWLAETEVGLELIGLTPQQARRAMADKRRVQGRGTLQALIDRSNN-G-A 471 (474) T ss_pred hhccceeEecCCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhcCCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-C-C Confidence 12234444455567788899999999999873 3334468889998642 11111111111222221111010 0 0 Q ss_pred CCC Q lcl|Aclame:pro 421 NGE 423 (432) Q Consensus 421 ~~~ 423 (432) ..| T Consensus 472 ~aq 474 (474) T protein:vir:81 472 TAQ 474 (474) T ss_pred CCC Confidence 111 No 169 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=98.84 E-value=1.6e-08 Score=63.31 Aligned_cols=407 Identities=10% Similarity=0.006 Sum_probs=189.4 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-cCCcCc-------ccccHHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPST-------ISVKGKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~-------~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) +..++.+.++....+..... .-..+..++ |..... .......-+..+....+++..+..+-.-|++ T Consensus 38 ~~~~~~i~~~i~~~~~~~~~------r~~~~~~yY~g~~~~i~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~ 111 (501) T protein:vir:96 38 VNNWELLKNFINHHKLRQAP------RIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPIR 111 (501) T ss_pred CChHHHHHHHHHHHHHHHHH------HHHHHHHHhcCCCCcccCccccCccccccceeecchHHHHHHHHhhhhcccCee Confidence 34333343332100000000 000011111 110000 0000011123566777888888888888888 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc- Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG- 151 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~- 151 (432) +...+++. ...+...|. +....-........++.+++.+|.+|+.+.++.+|.+ .+..++|..+.++.+... T Consensus 112 ~~~~~~~~-----~~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~v~d~~~~ 184 (501) T protein:vir:96 112 VEYDDNDD-----NSQNDDAIK-RIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDNSLE 184 (501) T ss_pred EeeCCccc-----hhHHHHHHH-HHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccceeEEEEcCCCC Confidence 75443221 122223232 2222234556788899999999999999999888865 467789999988887532 Q ss_pred -ceeccceeEEEecccCc---eEEEccce------------------------EEEEecCCCCCcccccCHHHHHHHHHH Q lcl|Aclame:pro 152 -LLNSKTKMWYVVNTGGQ---QRVLKPEE------------------------ILHFKNGITLDGLVGVPTMEYLKSTLE 203 (432) Q Consensus 152 -~~~~~~~~~~~~~~~~~---~~~~~~~~------------------------vih~~~~~~~~~~~G~s~~~~~~~~~~ 203 (432) ........++.....+. ...+.++. |+++++ ...|.|.+..+...++ T Consensus 185 ~~~~~~v~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~~liD 259 (501) T protein:vir:96 185 DNSIAAVRYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLN-----NIDGIGDYETELYLID 259 (501) T ss_pred CceEEEEEEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecC-----CccCCCchhhhHHHHH Confidence 11111111111111111 01122222 333321 2368888888777777 Q ss_pred HHHHHHHHHHHHHhccCCcceEEEeCCCCC-HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHH Q lcl|Aclame:pro 204 NSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENT 282 (432) Q Consensus 204 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~ 282 (432) ....+.-...+.+...+.|-.++....... ++....++.. ..-.....+.......+.+++.++....+..+.... T Consensus 260 a~d~~~s~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (501) T protein:vir:96 260 LYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKRT---RLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYK 336 (501) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecccccCcccchhhhhhc---CeeeecccccccccccCcceeeEeccCCHHHHHHHH Confidence 777666666666666667766665433222 1222111110 000000111111223444555444444444566778 Q ss_pred HHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhh Q lcl|Aclame:pro 283 ELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSK 351 (432) Q Consensus 283 ~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~ 351 (432) +...+.|+..-++|....+.. ++.+...... .....+...+..+++.+..-+...--....-.. .+. T Consensus 337 ~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~--~i~ 414 (501) T protein:vir:96 337 TRLNRDIHIFTNTPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFKDFDES--LLK 414 (501) T ss_pred HHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc--cce Confidence 888899999999987555432 2222111111 122344444445444444433321111111111 234 Q ss_pred hhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeee-cccccccccccc-ccCCCCCCCCCCCCC Q lcl|Aclame:pro 352 FNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLV-NGNMLPIDMAGQ-AYLKGGDTNGEVSKE 427 (432) Q Consensus 352 fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~-~~n~~~~~~~~~-~~~~gg~~~~~~~~~ 427 (432) +.+..-+..+..+.++.+.++. |+++..-+.+++++-..| ..+++.. ......-...++ ....|.+.+++.+.+ T Consensus 415 i~f~~~~p~n~~e~ad~~~kl~--g~iS~et~~~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 492 (501) T protein:vir:96 415 ITFTPNLPKSLNEQVSILTGLG--GQVSQETALSLSGLVESPNEELDKINKEMSEIDFKGYSNDFNEHVGKYTDEVKETH 492 (501) T ss_pred EEeCCCCCcCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHHHHHHHHHHHhhccccccchhhcccccCCcCCCCC Confidence 4446667888999999998884 789888888888653321 1111100 000000000111 111222223333333 Q ss_pred CCCCC Q lcl|Aclame:pro 428 GNEGN 432 (432) Q Consensus 428 ~~e~~ 432 (432) ++++. T Consensus 493 ~d~~e 497 (501) T protein:vir:96 493 TDDFE 497 (501) T ss_pred CCccc Confidence 33333 No 170 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=98.84 E-value=3.1e-08 Score=61.71 Aligned_cols=403 Identities=10% Similarity=0.062 Sum_probs=191.5 Q ss_pred CchHHHHHHhccccccccc---cccc-cCCchHHH---HHhh-c----------------------C--CcCcccccHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTS---QVIE-LNKDDEKL---LEWL-G----------------------I--SPSTISVKGKN 48 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~---~~~~-~~~~~~~~---~~~~-g----------------------~--~~~~~~v~~~~ 48 (432) |.|..-+-..-. ..-+.. ..+. .......+ .... + . .......+. T Consensus 1 ~~~~~~~~~~~~-~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (474) T protein:vir:10 1 MTLYKLIDDIEA-QGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNN-- 77 (474) T ss_pred CchHHHHhhccc-cCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCccc-- Confidence 554432211100 000000 0000 00000000 0000 0 0 000000000 Q ss_pred HhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC Q lcl|Aclame:pro 49 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR 128 (432) Q Consensus 49 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~ 128 (432) =+.++....+++..+.-+-+-|+.+.-.++.... ..+...|. +-............++.+++.+|.||..+..+. T Consensus 78 ki~~n~~~~ivd~~~~yl~g~pv~~~~~~~~~~~----e~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~ 152 (474) T protein:vir:10 78 KLNNSFDSEIVDTRVGYLHGVPVTYDLDENAEKN----EKLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYIDT 152 (474) T ss_pred ccccchHHHHHHhHhhheeccceeEeeCCCCcch----HHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCC Confidence 0124566777888888887888886543221111 11222222 112222445677788999999999999998888 Q ss_pred CCceEEEEEEcCcceEEEEcCccceeccceeEEEecc-cCc----eEEEccceEEEEecC------------CC------ Q lcl|Aclame:pro 129 KGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNT-GGQ----QRVLKPEEILHFKNG------------IT------ 185 (432) Q Consensus 129 ~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~vih~~~~------------~~------ 185 (432) +|.+ .+..++|..+.++.++..........++.... ++. ...+....+.+++.. ++ T Consensus 153 ~~~~-~~~~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPv 231 (474) T protein:vir:10 153 NGDI-RIKNIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPL 231 (474) T ss_pred CCee-EEEEEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccce Confidence 8865 56778888887777654432221111111111 110 011122222222210 00 Q ss_pred ---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC Q lcl|Aclame:pro 186 ---LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV 262 (432) Q Consensus 186 ---~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~ 262 (432) .+...|.|-+..+...++....+.-...+.+...+.|-.+++- ...+++....++ ..+.+.+.++ T Consensus 232 v~~~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~ 299 (474) T protein:vir:10 232 FGVPNNKEMIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDK 299 (474) T ss_pred EEecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCC Confidence 0123577777777777776666555555555555666555543 233333322211 1244556666 Q ss_pred CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 263 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYE 331 (432) Q Consensus 263 g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~ 331 (432) +.+++.+.....+..+....+...+.|...-++|....+.. ++.++.... ......+...+...++.|. T Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~ 379 (474) T protein:vir:10 300 DMDVKYLTKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVIL 379 (474) T ss_pred CCceeEEeccCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 66776665554555667888888999999999987554322 222221111 1223345555555555555 Q ss_pred HHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeeccccccccc Q lcl|Aclame:pro 332 QEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDM 409 (432) Q Consensus 332 ~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~ 409 (432) ..+..+-..... ..-..+.+.+..-...|..+.++.+.++ .|+++..-+.+++++-+.+ ..+++..- .-.... T Consensus 380 ~~l~~~~~~~~~-~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E-~~e~~~- 454 (474) T protein:vir:10 380 SALKRKGYNLDD-DSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE-SLEFND- 454 (474) T ss_pred HHHhhccCCCCc-cccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH-HHHHHh- Confidence 544432111100 0112344555666778899999999888 4889998899998764322 11111000 000001 Q ss_pred cccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 410 AGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 410 ~~~~~~~gg~~~~~~~~~~~e 430 (432) ......+++.++++++...| T Consensus 455 -~~~~~~~~~~~~~~~~~~s~ 474 (474) T protein:vir:10 455 -KLPDIDEGDANDKSQNNQSE 474 (474) T ss_pred -hcccccCCCcCCCCccccCC Confidence 11223334444444433333 No 171 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=98.84 E-value=3.1e-08 Score=61.71 Aligned_cols=403 Identities=10% Similarity=0.062 Sum_probs=191.5 Q ss_pred CchHHHHHHhccccccccc---cccc-cCCchHHH---HHhh-c----------------------C--CcCcccccHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTS---QVIE-LNKDDEKL---LEWL-G----------------------I--SPSTISVKGKN 48 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~---~~~~-~~~~~~~~---~~~~-g----------------------~--~~~~~~v~~~~ 48 (432) |.|..-+-..-. ..-+.. ..+. .......+ .... + . .......+. T Consensus 1 ~~~~~~~~~~~~-~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (474) T protein:vir:94 1 MTLYKLIDDIEA-QGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNN-- 77 (474) T ss_pred CchHHHHhhccc-cCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCccc-- Confidence 554432211100 000000 0000 00000000 0000 0 0 000000000 Q ss_pred HhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC Q lcl|Aclame:pro 49 ALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR 128 (432) Q Consensus 49 a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~ 128 (432) =+.++....+++..+.-+-+-|+.+.-.++.... ..+...|. +-............++.+++.+|.||..+..+. T Consensus 78 ki~~n~~~~ivd~~~~yl~g~pv~~~~~~~~~~~----e~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~ 152 (474) T protein:vir:94 78 KLNNSFDSEIVDTRVGYLHGVPVTYDLDENAEKN----EKLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYIDT 152 (474) T ss_pred ccccchHHHHHHhHhhheeccceeEeeCCCCcch----HHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCC Confidence 0124566777888888887888886543221111 11222222 112222445677788999999999999998888 Q ss_pred CCceEEEEEEcCcceEEEEcCccceeccceeEEEecc-cCc----eEEEccceEEEEecC------------CC------ Q lcl|Aclame:pro 129 KGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYVVNT-GGQ----QRVLKPEEILHFKNG------------IT------ 185 (432) Q Consensus 129 ~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~vih~~~~------------~~------ 185 (432) +|.+ .+..++|..+.++.++..........++.... ++. ...+....+.+++.. ++ T Consensus 153 ~~~~-~~~~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPv 231 (474) T protein:vir:94 153 NGDI-RIKNIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPL 231 (474) T ss_pred CCee-EEEEEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccce Confidence 8865 56778888887777654432221111111111 110 011122222222210 00 Q ss_pred ---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC Q lcl|Aclame:pro 186 ---LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV 262 (432) Q Consensus 186 ---~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~ 262 (432) .+...|.|-+..+...++....+.-...+.+...+.|-.+++- ...+++....++ ..+.+.+.++ T Consensus 232 v~~~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~-----------~~~~i~~~~~ 299 (474) T protein:vir:94 232 FGVPNNKEMIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ-----------KSGAFELFDK 299 (474) T ss_pred EEecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh-----------hcceeEecCC Confidence 0123577777777777776666555555555555666555543 233333322211 1244556666 Q ss_pred CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 263 GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYE 331 (432) Q Consensus 263 g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~ 331 (432) +.+++.+.....+..+....+...+.|...-++|....+.. ++.++.... ......+...+...++.|. T Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~ 379 (474) T protein:vir:94 300 DMDVKYLTKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVIL 379 (474) T ss_pred CCceeEEeccCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 66776665554555667888888999999999987554322 222221111 1223345555555555555 Q ss_pred HHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeeccccccccc Q lcl|Aclame:pro 332 QEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDM 409 (432) Q Consensus 332 ~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~ 409 (432) ..+..+-..... ..-..+.+.+..-...|..+.++.+.++ .|+++..-+.+++++-+.+ ..+++..- .-.... T Consensus 380 ~~l~~~~~~~~~-~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E-~~e~~~- 454 (474) T protein:vir:94 380 SALKRKGYNLDD-DSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE-SLEFND- 454 (474) T ss_pred HHHhhccCCCCc-cccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH-HHHHHh- Confidence 544432111100 0112344555666778899999999888 4889998899998764322 11111000 000001 Q ss_pred cccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 410 AGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 410 ~~~~~~~gg~~~~~~~~~~~e 430 (432) ......+++.++++++...| T Consensus 455 -~~~~~~~~~~~~~~~~~~s~ 474 (474) T protein:vir:94 455 -KLPDIDEGDANDKSQNNQSE 474 (474) T ss_pred -hcccccCCCcCCCCccccCC Confidence 11223334444444433333 No 172 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.83 E-value=3.4e-08 Score=61.52 Aligned_cols=411 Identities=10% Similarity=0.008 Sum_probs=191.1 Q ss_pred Cch--------HHHHHHhccccccccccccccCCchHHHHHhh-cCCcCcc----ccc---HHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKI--------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPSTI----SVK---GKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~----~v~---~~~a~~~~~v~~~i~~ia~ 64 (432) |.. ++.|+++....+.. .. ..-..+..++ |...... ... ...-...+.....++..+. T Consensus 31 ~~~~~~~~~~~~~~i~~~i~~h~~~---~~---~rl~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~ 104 (502) T protein:vir:48 31 ADNLEELMVNNWELLKNFINHHKLR---QA---PRIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTG 104 (502) T ss_pred ccchhhhccccHHHHHHHHHHHHHH---HH---HHHHHHHHHhcCCCccccccccccccccccceeecchHHHHHHHHhh Confidence 111 12222221100000 00 0000011111 1000000 000 0001124566777888888 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 144 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~ 144 (432) .+-.-|+.+...++.. ..++...|+ +....-........++.+++.+|.+|+.+.++.+|.+ .+..++|..+. T Consensus 105 yl~g~p~~~~~~d~~~-----~~~~~~~l~-~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~ 177 (502) T protein:vir:48 105 YLAGNPIRVEYDDNED-----NSQNDDAIK-RIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETF 177 (502) T ss_pred hhcccCeeEecCCccc-----hhHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCce-EEEEEcccceE Confidence 8888888876543221 122333332 2222234456788899999999999999999888865 46778899888 Q ss_pred EEEcCcccee-ccceeEEEe-cccCc---eEEEccceEEEEecC----------CCC---------CcccccCHHHHHHH Q lcl|Aclame:pro 145 VYIDDVGLLN-SKTKMWYVV-NTGGQ---QRVLKPEEILHFKNG----------ITL---------DGLVGVPTMEYLKS 200 (432) Q Consensus 145 ~~~~~~~~~~-~~~~~~~~~-~~~~~---~~~~~~~~vih~~~~----------~~~---------~~~~G~s~~~~~~~ 200 (432) ++.+...... .....+|.. ...+. ...+.++.++++... ++. +...|.|-+..+.. T Consensus 178 ~vydd~~~~~~~~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~ 257 (502) T protein:vir:48 178 VIYDNSLEDNSIAAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELY 257 (502) T ss_pred EEEcCCCCCceEEEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHH Confidence 8876532111 111111111 11111 112333333333211 111 12368888888888 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCH-HHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH Q lcl|Aclame:pro 201 TLENSASADKFINNFYKQGLQVKGLVQYVGDLNE-DAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 279 (432) Q Consensus 201 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~ 279 (432) .++....+.-...+.++....|-.++.......+ +....+++. ...+... .+..-..+++.+++.++.......+. T Consensus 258 liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~d~~~l~~~~~~~~~~ 334 (502) T protein:vir:48 258 LIDLYDSAESDTANHMSDMADAILAIYGDLALPQGMQASDMKRT-RLMQLKP--PKSADGKEGTVKAEYLTKSYDVSGAE 334 (502) T ss_pred HHHHHHHHHHHHHHHHHHhcCceeeeecCcccccccchhhhhhc-ceeeccc--cccccccccCcceeEeeecCCHHHHH Confidence 8887777776667777777777666654433222 222111111 0000000 00011123345555554444444456 Q ss_pred HHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF 348 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~ 348 (432) ...+...+.|+..-++|+...+.. ++.++.... ......+...+.-+++.+...+...--....-.. T Consensus 335 ~~~~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~-- 412 (502) T protein:vir:48 335 AYKTRLNKDIHVFTNTPDMSDNHFSGNASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDES-- 412 (502) T ss_pred HHHHHHHHHHHHHhCCCCcCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-- Confidence 678888999999999987654332 222211111 1222444455555555554444322111111112 Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeee---ccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 349 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLV---NGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 349 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~---~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) .+.+.+..-+..|..+.++++.++ .|+++..-+.+++++-..+ ..+++.. .....+.... ..+..+...++. T Consensus 413 ~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~-~~~~~~~~~d~~ 489 (502) T protein:vir:48 413 RLKITFTPNLPKSLYEQVSILNDL--GGQVSQETALSLSGLVENPTEELDKINEESSKIDFKGYPSY-FYDNVGKYTDEV 489 (502) T ss_pred cceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhhhccccc-ccccccccCCCc Confidence 244445677788899999999888 5789988888888764322 1111100 0011111100 011112222222 Q ss_pred CCCCCCCCC Q lcl|Aclame:pro 424 VSKEGNEGN 432 (432) Q Consensus 424 ~~~~~~e~~ 432 (432) .++..+|.. T Consensus 490 ~e~~~~~~~ 498 (502) T protein:vir:48 490 KETHTDDFE 498 (502) T ss_pred cCCCCcCcC Confidence 333333333 No 173 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=98.81 E-value=2.2e-08 Score=62.60 Aligned_cols=405 Identities=11% Similarity=0.030 Sum_probs=180.8 Q ss_pred CchHHHHHHh----cccccccc-cccc----ccCCch-H----H--HHHhhcC-CcCcccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKF----FNFEKRQT-SQVI----ELNKDD-E----K--LLEWLGI-SPSTISVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~----~~~~~~~~-~~~~----~~~~~~-~----~--~~~~~g~-~~~~~~v~~~~a~~~~~v~~~i~~ia 63 (432) ||||.+++.+ ++...... .... ...... . . +..+++. ...... ..-+..+....+++.+| T Consensus 1 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~---~~~~~~~l~~~i~~~~A 77 (518) T protein:vir:78 1 MGVWSVMTRFIKGWLNGKPNGSEPELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYVPTVH---DKLMNSGTGNEIVVVAA 77 (518) T ss_pred CcchhhHHHHHHHhhcCCCCccchhccHHHhhhcccchhhhhhhhhhhhhcccCCCCccc---cccccCChHHHHHHHHH Confidence 9999887664 33221100 0000 000000 0 0 0011121 111111 11223445666788888 Q ss_pred HhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcce Q lcl|Aclame:pro 64 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKV 143 (432) Q Consensus 64 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v 143 (432) +-+..-+..+.-.+.+.... ..+...|.. --..-.....+...+.+.+..|.+++.+..+ .|. ..+..+++..+ T Consensus 78 ~ll~~e~~~i~v~~~~~~d~---e~~~~~l~~-il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d-~~~-~~i~~v~ad~~ 151 (518) T protein:vir:78 78 EYISGKPLSIDVTGVNGSKD---ENLTKQLKE-ALRIDNFDSKSVKIVELAGGSGVSAVKINIL-NGR-PSISVHSSSQF 151 (518) T ss_pred HhhcCCCceEEecCccccCc---HHHHHHHHH-HHHhccHHHHHHHHHHHhhccCceEEEEEEE-CCe-eEEEEEcCCee Confidence 88766555543222211110 111122211 1111123444556777888899988877654 344 24555666665 Q ss_pred EEEEcCcccee----------ccc-------------------------eeEEEeccc-CceEE-------------Ecc Q lcl|Aclame:pro 144 TVYIDDVGLLN----------SKT-------------------------KMWYVVNTG-GQQRV-------------LKP 174 (432) Q Consensus 144 ~~~~~~~~~~~----------~~~-------------------------~~~~~~~~~-~~~~~-------------~~~ 174 (432) -+......... ... ..+..+..+ +.... ..+ T Consensus 152 ~P~~~~g~~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~ 231 (518) T protein:vir:78 152 WIDFKNNEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHT 231 (518) T ss_pred EEEeecCcEEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCccccccccccccccccccccc Confidence 55332110000 000 000011100 10000 000 Q ss_pred --------------c-eEEEEecCCCC----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEe-----CC Q lcl|Aclame:pro 175 --------------E-EILHFKNGITL----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY-----VG 230 (432) Q Consensus 175 --------------~-~vih~~~~~~~----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~-----~~ 230 (432) . -+.|+++..+. +...|+|.+.-+...+...+........-|+. +.+..++.. .. T Consensus 232 ~~~~e~~~~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~-g~~~i~v~~~~l~~~~ 310 (518) T protein:vir:78 232 NDIQLNHSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEK-TKTKIAASERMFRKKV 310 (518) T ss_pred ccCccceeeccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHh-CCceeeechhHhccCC Confidence 0 12333432111 24569999999999988888877777777765 455544421 11 Q ss_pred -CCCHHHHHHHHHHHHHHhcccccccceeecCCCc----eeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 231 -DLNEDAKKVFRENFESMSSGLQNSHRIALMPVGY----QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 231 -~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~----~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) .......-.+.. =.+.|.... .-.++|. .++.++....+.++.+..+...+.+....|+++..++.... T Consensus 311 ~~~~~~~~~~fd~-~~~~y~~i~-----~~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~~ 384 (518) T protein:vir:78 311 NKSTDKEEWSMNV-DEDYFMQFK-----GTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNR 384 (518) T ss_pred CCCCCccccccCC-CCceEEEec-----CcCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCcccc Confidence 101000000000 000010000 0012222 36677777778889999999999999999999999875432 Q ss_pred cccccHHHH-----------HHHHHHHHHHHHHHHHHHHHHHhhccc---hhhcchhhhhhhhhhhhhhhHHHHHHHHHH Q lcl|Aclame:pro 306 ATLNNIEQQ-----------QQQFYTDTLQATLTMYEQEMTYKLFLD---SELDKGFYSKFNVDAILRADIKTRYEAYRT 371 (432) Q Consensus 306 ~~~~~~~~~-----------~~~~~~~~l~P~~~~i~~~l~~~ll~~---~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~ 371 (432) ...++--.. ....++.+|.-++..+...+.. +... ........+.+++++-...|.++.++...+ T Consensus 385 ~~TATei~s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~-~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~ 463 (518) T protein:vir:78 385 EVKATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTG-GTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNN 463 (518) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHH Confidence 211111111 1223333343344434332211 1110 011123456677788888999999999999 Q ss_pred HHhCCCcCHHHHHHHh--CCCCCCCcc-eee-eccccccccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 GIQGGFLKPNEARSKE--DLPPEAGGD-RLL-VNGNMLPIDMAGQAYLKGGDTNGEVSKEGN 429 (432) Q Consensus 372 ~~~~g~~t~nE~R~~~--gl~p~~~gd-~~~-~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~ 429 (432) ++.+|+|++.++-+++ |+.. ++.+ ++. +...- .....+++...+| ..+.. | T Consensus 464 ~v~aGimS~e~~i~~~~~~~~d-eea~~e~~ri~~E~-~~~~~~~p~~~~g----~~~~~-g 518 (518) T protein:vir:78 464 MNSALAMSVEEKVKLIHPKWED-EEIQAEVKRIYLEN-AIGEVPDPEAIGG----METKG-G 518 (518) T ss_pred HHhcCCCCHHHHHHHhCCCCCH-HHHHHHHHHHHHHh-cccCCCCCccccC----CCCCC-C Confidence 9999999999965554 3322 1111 110 00000 0000111111111 11111 1 No 174 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=98.78 E-value=2.2e-10 Score=73.48 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=97.5 Q ss_pred EEEeCCC-----CCHHHHHHHHHHHH--HHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCCh Q lcl|Aclame:pro 225 LVQYVGD-----LNEDAKKVFRENFE--SMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKM 297 (432) Q Consensus 225 ~~~~~~~-----~~~~~~~~~~~~~~--~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~ 297 (432) |++.++- ....+ +++++. ..+.+ +.+.+.+...+-+|++++.+...+. +........||.+-|||. T Consensus 1 V~k~~~l~~~~~~~~~~---~~~r~~~~~~~~~--~~~~~~ld~~~e~~e~~~~~lsGl~--d~l~~~~~~iaa~s~iP~ 73 (201) T protein:vir:10 1 MWKAKGLADLCDDSDGA---ARLRLAQVDNNSG--VGQAIGIDADSEEYNVLNSDIGGID--TFLSQKFDRIVALSGIHE 73 (201) T ss_pred CccchHHHHHhcCChHH---HHHHHHHHHHhhh--hhhhheeecCCcceeeeecCcCChH--HHHHHHHHHHHhHhcCch Confidence 3333321 11222 333333 23333 2344566666678888887777554 678888899999999999 Q ss_pred hhccCccccccc-cHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHH-- Q lcl|Aclame:pro 298 HQLNDLSKATLN-NIEQQQQQFYT-------DTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYE-- 367 (432) Q Consensus 298 ~~l~~~~~~~~~-~~~~~~~~~~~-------~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~-- 367 (432) ..|.+.+.+..+ +.+.-.+.||. .-+.|.++.+-+- +. ...+ +.|.|.+|..++.+++++ T Consensus 74 t~LfG~sp~Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~-----~~---~~~~--~~~~f~pL~~~s~kekAei~ 143 (201) T protein:vir:10 74 IILKGKNVGGVSASQNTALETFYGYVDRKRKAELLPLLEFLLPF-----IV---TEQE--WSVEFNPLSQVSDKDKSEIL 143 (201) T ss_pred hhhcCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hc---CCCC--ceEeeCCCCCCCHHHHHHHH Confidence 999877666544 23333333333 3445555544332 11 1233 445558998888777655 Q ss_pred -----HHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 -----AYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 368 -----~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ++.+++.+|+++++|+|+.|--.+..++ ++.+..+.+ -....++.+-+..++| T Consensus 144 ~~~a~a~~~~~~~g~i~~~e~r~~L~~~~~~~~----~~~~~~~~~--------~~~~e~~dp~~~~~~~ 201 (201) T protein:vir:10 144 EKNVNSVAALIAAGIIDADEARDTLRAISTEVK----IGEGSIQTE--------VVINESEDPLDVSANN 201 (201) T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCcCC----CCCCCCCcc--------ccccccCCCCCCCCCC Confidence 5566888999999999998855443221 111111111 0111112222223333 No 175 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=98.77 E-value=5.7e-08 Score=60.28 Aligned_cols=409 Identities=9% Similarity=0.039 Sum_probs=185.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc----------CcccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP----------STISVKGKNALKVATVFACIKILSESVSKLP 70 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~ 70 (432) .-..+.|.++...... ... ..-..+...+-... .......+ +..+.....++..+..+-+-| T Consensus 39 ~~~~~~i~~~i~~~~~---~~~---~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~k--i~~n~~k~Iv~~~~~yl~g~p 110 (511) T protein:vir:93 39 LQNVNEVSKYIEHHMD---YQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNR--VAHDYASYISDFINGYFLGNP 110 (511) T ss_pred hccHHHHHHHHHHHHH---hhH---HHHHHHHHHhcccCccccccCcCcccccCcce--eecchHHHHHHHHhhhhcccC Confidence 1111222221110000 000 00000111110000 00000000 123556667778888777888 Q ss_pred eEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCc Q lcl|Aclame:pro 71 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 150 (432) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~ 150 (432) +++...+++ ....+..++ ..-........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++.+.. T Consensus 111 ~~~~~~d~~-----~~~~l~~~~-----~~n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~-~i~~~~p~~~~~vydd~ 179 (511) T protein:vir:93 111 IQYQDDDKD-----VLEVIEAFN-----DLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNT 179 (511) T ss_pred eeeccCChH-----HHHHHHHHH-----hhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCC Confidence 876422211 111222222 2224456677889999999999999999888865 46778999988887754 Q ss_pred ccee-ccceeEEEec-ccC---c----eEEEccceEEEEecCCC-------------------------CCcccccCHHH Q lcl|Aclame:pro 151 GLLN-SKTKMWYVVN-TGG---Q----QRVLKPEEILHFKNGIT-------------------------LDGLVGVPTME 196 (432) Q Consensus 151 ~~~~-~~~~~~~~~~-~~~---~----~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~ 196 (432) .... .....+|... ..+ . ...+.++.+.+++.... .+...|.|-+. T Consensus 180 ~~~~~~~~vr~~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd~e 259 (511) T protein:vir:93 180 IERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYE 259 (511) T ss_pred CCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCchh Confidence 2211 1111111111 110 0 11234444444321110 01236788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccc-ccccceeecCCCceeeecCCChhH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGL-QNSHRIALMPVGYQFQPISLNMSD 275 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~~~~d 275 (432) .+...++....+.--..+.+...+.|-.++.-....+.++....++.-.-..... .-.+...-.+++.+++.++..... T Consensus 260 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (511) T protein:vir:93 260 KVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDV 339 (511) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCH Confidence 7777777776666555566666667766666544444444333222111100000 000111223445555555544445 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhh Q lcl|Aclame:pro 276 AQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSEL 344 (432) Q Consensus 276 ~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~ 344 (432) ..+....+...+.|+..-++|..-.+.. ++.++.... ......+...+...++.|...+..+.-.... T Consensus 340 ~~~~~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~l~~~~~~~~~- 418 (511) T protein:vir:93 340 QGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDAN- 418 (511) T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc- Confidence 5566778888999999999987654322 222211111 1223344445555555555433322110000 Q ss_pred cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--cceeeecc-ccccccccccccCCCCCCC Q lcl|Aclame:pro 345 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG-NMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 345 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--gd~~~~~~-n~~~~~~~~~~~~~gg~~~ 421 (432) ..-..+++.+..-...+..+.++.+.++ .|+++..-+++++++-+.+. .+++..-. ..............++. + T Consensus 419 ~d~~~i~~~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~-~ 495 (511) T protein:vir:93 419 KDFNTVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDI-N 495 (511) T ss_pred cccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhhcccCCCCC-C Confidence 0011244445666778888899988888 58899888888886644321 11110000 00000000000111111 1 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 422 GEVSKEGNEGN 432 (432) Q Consensus 422 ~~~~~~~~e~~ 432 (432) ++.++..++++ T Consensus 496 ~~~~~~~~~~~ 506 (511) T protein:vir:93 496 DDEQDDDTKDT 506 (511) T ss_pred CCCCCCccccc Confidence 11112222222 No 176 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=98.74 E-value=7.4e-08 Score=59.68 Aligned_cols=349 Identities=12% Similarity=0.093 Sum_probs=159.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc--CcccccHHH----Hh--ccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKGKN----AL--KVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~~~~----a~--~~~~v~~~i~~ia~~ia~~~~~ 72 (432) ..++++|...+..... .......+..... ....++... .+ ......-+|+.++..+.=-.|. T Consensus 3 ~~~i~~L~~~~~~~~~----------r~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~ 72 (409) T protein:vir:16 3 EKGIGYLRFKLSVHKR----------RAEMRYEQYAMKHVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFE 72 (409) T ss_pred HHHHHHHHHHHHHHhH----------HHHHHHHHHhccCchhhcchhhhHHHHHHHhhhcChhHHHHHHhHhhccccccc Confidence 2334444433321110 0000111111110 001111100 01 1233444555555533222221 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) .. +..+...+. + |. .......+..+.+++|.+|+.+..+.+|.+ .+.+++|..+..++|.... T Consensus 73 ---~~--------d~~l~~i~~-~-N~---ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~ 135 (409) T protein:vir:16 73 ---ND--------DFTVNEIFE-E-NN---PDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITG 135 (409) T ss_pred ---Cc--------chHHHHHHH-h-cC---hhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccc Confidence 11 112333332 2 32 234566788899999999999998888864 6778888888887765311 Q ss_pred eeccceeEEEecccCce-E--EEccc----------------------eEEEEecCCCCCcccccCHH----HHHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQQ-R--VLKPE----------------------EILHFKNGITLDGLVGVPTM----EYLKSTLE 203 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~~-~--~~~~~----------------------~vih~~~~~~~~~~~G~s~~----~~~~~~~~ 203 (432) .......++.....+.. . .+.++ -|++|.+.......+|.|-| ..+...+. T Consensus 136 ~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~ 215 (409) T protein:vir:16 136 LLTEGYAVLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAK 215 (409) T ss_pred cceeeeEEEEecCCCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHH Confidence 11100001100111110 0 01111 26666655555667888844 33334444 Q ss_pred HHHHHHHHHHHHHhccCCcceEEE-eCCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeeecCCChhHHH Q lcl|Aclame:pro 204 NSASADKFINNFYKQGLQVKGLVQ-YVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQ 277 (432) Q Consensus 204 ~~~~~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~~ 277 (432) ....-......++ +.|.-++. .+.+.. ..+.++... ++++.++ .+.++.+++.+.-+ . T Consensus 216 r~~~~~~~~~e~~---a~pqr~i~G~d~d~~--~~~~~~~~~----------~~i~~~~~d~~g~~~~v~q~~~~~l~-~ 279 (409) T protein:vir:16 216 RTLERADVTAEFY---SFPQKYVTGLSDDAE--PMETWKATV----------SSMLQFTKDEDGDKPTLGQFTQPSMS-P 279 (409) T ss_pred HHHHHHHHHHHHh---cChhheeEecCCCCC--ccchhhhhh----------hHhhccCCCCCCCCceEEecCCCChh-H Confidence 3333333444444 34444443 222221 122222211 2233332 34567666554333 4 Q ss_pred HHHHHHHHHHHHHHHhcCChhhccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHh----h--ccchh--hcch Q lcl|Aclame:pro 278 FLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK----L--FLDSE--LDKG 347 (432) Q Consensus 278 ~~e~~~~~~~~I~~~~gvp~~~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~----l--l~~~~--~~~~ 347 (432) +++.++.....+|..-++|+..+|+.... +...+.++...+...+ .-..+.+.+.+.+- + ..... .... T Consensus 280 ~~~~l~~~~~~~a~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~ka-~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~ 358 (409) T protein:vir:16 280 FTEQLRTAAAGFAGETGLTLDDLGFVSDNPSSVEAIKASHENLRLAG-RKAQRSLGAGLLNVAYLAACLRDDVPYLREQF 358 (409) T ss_pred HHHHHHHHHHHHhhhcCCCHHHcccccCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCccchhh Confidence 78999999999999999999999875432 1112222222222111 11111122222111 0 01000 0111 Q ss_pred hhhhhhhhhhh---hhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 348 FYSKFNVDAIL---RADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA 393 (432) Q Consensus 348 ~~~~fd~~~l~---~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~ 393 (432) ..+++.+.+.. ..+..+.++++.|++++| +...+-+++++|+..-+ T Consensus 359 ~~~~v~W~~~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~g~~~~d 409 (409) T protein:vir:16 359 SKTKPKWEPLFEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIKGAE 409 (409) T ss_pred ccceEEecCCCCcchhhHHHHHHHHHHHHhhcccccchhHHHHhccCCCCC Confidence 22333334333 334677888999999986 33346679999998765 No 177 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.67 E-value=1.3e-07 Score=58.40 Aligned_cols=395 Identities=11% Similarity=0.034 Sum_probs=169.6 Q ss_pred Cc---------hHHHHHHhccccccccccccccCCchHHHHHhhcCCc--Cccccc-HH---H-HhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MK---------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVK-GK---N-ALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~-~~---~-a~~~~~v~~~i~~ia~ 64 (432) +| +...|...+...... ...+..++-+.. ...+.. .. . -.......-+|+..+. T Consensus 6 ~~~~e~~~~~~~~~~l~~~~~~~~~r----------~~~l~~YY~G~~~i~~~~~~~~~~~~~~~~v~n~~~~iVd~~~~ 75 (486) T protein:vir:42 6 PGMEEIEDPAVVREEMISAFEDASKD----------LASNTSYYDAERRPEAIGVTVPREMQQLLAHVGYPRLYVDSVAE 75 (486) T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHH----------HHHHHHHhcccCcchhcccccchhHhhhhhccchHHHHHHHHHh Confidence 11 233333322211000 000011110000 000000 00 0 0112345556666666 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc-------eEEEEE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-------VQALWP 137 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~-------~~~l~~ 137 (432) .+--..|.+- + +. .....+..++. . |. .......++.+++.+|.+|+.+.++..|. ...+.+ T Consensus 76 ~l~~~g~~~~---~-~~--~~~~~~~~i~~-~-N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~ 144 (486) T protein:vir:42 76 RQAVEGFRLG---D-AD--EADEELWQWWQ-A-NN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRV 144 (486) T ss_pred hhcccceecC---C-Cc--hhHHHHHHHHH-h-cC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEE Confidence 5544444421 1 11 11112333332 2 32 23556788999999999999987765432 235677 Q ss_pred EcCcceEEEEcCccceecccee---------------------EEEecccCceEE-------EccceEEEEecCCCCCcc Q lcl|Aclame:pro 138 IDASKVTVYIDDVGLLNSKTKM---------------------WYVVNTGGQQRV-------LKPEEILHFKNGITLDGL 189 (432) Q Consensus 138 ~~~~~v~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~-------~~~~~vih~~~~~~~~~~ 189 (432) ++|..+.++.|........... ++....+|.... +..=-|++|+++....+. T Consensus 145 ~~p~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~ 224 (486) T protein:vir:42 145 EPPTRMHAEIDPRINRVSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDL 224 (486) T ss_pred ecccceEEEEeCCCCCeEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCC Confidence 8888888877643111000000 111111111111 011125666655555666 Q ss_pred cccCHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH----HHHHHHHHHhcccccccceeecC-CC Q lcl|Aclame:pro 190 VGVPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK----VFRENFESMSSGLQNSHRIALMP-VG 263 (432) Q Consensus 190 ~G~s~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~n~g~~~vl~-~g 263 (432) +|.|-+.. +...++......-......+-.+.|..++.-. ++++.. +-...|.. ..+.+.+++ ++ T Consensus 225 ~G~s~i~~~v~~liDa~~~~~s~~~~~~e~~a~p~~~i~G~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 295 (486) T protein:vir:42 225 YGTSEITPELRSMTDAAARILMLMQATAELMGVPQRLIFGI---KPEEIGVDSETGQTLFDA------YLARILAFEDAE 295 (486) T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHhhcchHHHhhcC---Cccccccccccccchhhh------hhchhcccCCCC Confidence 88886553 22333333332222222223333343333311 111110 11111211 123444543 56 Q ss_pred ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH-------------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 264 YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ-------------QQQQFYTDTLQATLTMY 330 (432) Q Consensus 264 ~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~-------------~~~~~~~~~l~P~~~~i 330 (432) .+|.++..+..+ .+++.++....+++..=++|+..+++...++ ++.++ .....+...+..+++.+ T Consensus 296 ~~~~q~~~~~~e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~-~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~ 373 (486) T protein:vir:42 296 GKIQQFSAAELA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNP-ASAEAIRAAESRLIKKVERKNLMFGGAWEEAMRIA 373 (486) T ss_pred ceEEeecccCHH-HHHHHHHHHHHHHhcccCCCHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 777776654333 3678888888999999999999987643221 11111 12222333333333332 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCC--Ccceee-----ec Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEA--GGDRLL-----VN 401 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~--g~~t~nE~R~~~gl~p~~--~gd~~~-----~~ 401 (432) ....+. .-.+. ....+++.+..-...+..+.++++.+++++ |+++..-+++.+|+-+.+ ...++. .+ T Consensus 374 ~~~~~~-~~~~~---d~~~i~v~w~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~lg~~~d~~~e~~~~~~e~~~~~ 449 (486) T protein:vir:42 374 YRIMKG-GDVPP---DMLRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARIDMGYSVKEREEMRRWDEEEAAMG 449 (486) T ss_pred HHHhcC-CCccc---cceeeeEEecCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHH Confidence 221110 00011 112333444555677888899999999886 678877788999886542 111110 00 Q ss_pred c----cccccccccc-ccCCCCCCCCCCC--CCCCCC Q lcl|Aclame:pro 402 G----NMLPIDMAGQ-AYLKGGDTNGEVS--KEGNEG 431 (432) Q Consensus 402 ~----n~~~~~~~~~-~~~~gg~~~~~~~--~~~~e~ 431 (432) . .+.......+ ....+++..++++ ..++++ T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (486) T protein:vir:42 450 LGLLGTMVDADPTVPGSPSPTAPPKPQPAIESSGGDA 486 (486) T ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCcccCCCCCCC Confidence 0 0101111111 1111222222222 333333 No 178 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=98.67 E-value=1.3e-07 Score=58.40 Aligned_cols=386 Identities=9% Similarity=0.044 Sum_probs=180.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC-------------cccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS-------------TISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------------~~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) +-+.+.|.++.......... -..+....-+... ....-...=+..+....+++..+..+- T Consensus 23 ~~~~~~i~~~i~~~~~~~~~-------~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~~~~~l~ 95 (472) T protein:vir:93 23 ETLEEMIVRYIKQHLEKLPE-------ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIV 95 (472) T ss_pred hhHHHHHHHHHHHHHHHHHH-------HHHHHHHhccccccccccchhhccccccccccccccccchHHHHHHHHhhhhc Confidence 22233332221110000000 0000011000000 000000000124667778888888887 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) .-|+.+...+++ ....+...+. | ........+..+++.+|.+|+.+..+.+|.+ .+..++|..+.++. T Consensus 96 g~~~~~~~~d~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~-~i~~~~p~~~~~i~ 163 (472) T protein:vir:93 96 GKPIAFKHTDDE-----VVKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIW 163 (472) T ss_pred ccCeeeccCChH-----HHHHHHHHHh---c---cHHHHHHHHHHHHhhcCeEEEEEEECCCCce-EEEEEcccceEEEE Confidence 777776432211 1112222221 2 2345566778999999999999998888875 46778999988887 Q ss_pred cCccce-eccceeEEEecccCceEEEccce-----------------------------------EEEEecCCCCCcccc Q lcl|Aclame:pro 148 DDVGLL-NSKTKMWYVVNTGGQQRVLKPEE-----------------------------------ILHFKNGITLDGLVG 191 (432) Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------vih~~~~~~~~~~~G 191 (432) +..... ......+|..........+.... |+++++ ...| T Consensus 164 d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n-----n~~g 238 (472) T protein:vir:93 164 TDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN-----NDLE 238 (472) T ss_pred cCCCCCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC-----CCCC Confidence 643211 11111111111111111222222 222221 2468 Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCC Q lcl|Aclame:pro 192 VPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISL 271 (432) Q Consensus 192 ~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~ 271 (432) .|-+..+...++....+.-...+.++..+.|..++..-.... .....+.+. ..+++.++++.+.+.+.. T Consensus 239 ~s~~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~l~~ 307 (472) T protein:vir:93 239 ISDIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDDQE---LPEFKRLLR--------YYGAIKVSDNGGVDTIQV 307 (472) T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHhcCceeEeecCCccc---chhhHHHHh--------hccccccCCCCcceeEee Confidence 888888777777776666666666666777766665332221 112222111 123444455555555544 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 272 NMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFL 340 (432) Q Consensus 272 ~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~ 340 (432) ......+....+...+.|+..-++|..-.... ++.++..... .....+...+..+++.|...++ T Consensus 308 ~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~----- 382 (472) T protein:vir:93 308 EVPVENSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD----- 382 (472) T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----- Confidence 44556677888888999999999986554322 1112111111 1123333344444444433332 Q ss_pred chhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc--ccccccccccccCC Q lcl|Aclame:pro 341 DSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG--NMLPIDMAGQAYLK 416 (432) Q Consensus 341 ~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~--n~~~~~~~~~~~~~ 416 (432) ...... .+.+.+..-...|..+.++.+.++ .|+++..-+.+++++-+.+ ..++...-. ....+......... T Consensus 383 ~~~~~~--~i~v~f~~~~p~~~~~~~~~~~k~--~giis~et~l~~l~~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d 458 (472) T protein:vir:93 383 IKGEHK--DVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGGAD 458 (472) T ss_pred CCcccc--eeeEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhccCcCcccCC Confidence 111122 334444666677888889988887 5789988888888764321 111110000 00001111111111 Q ss_pred CCCCCCCCCCCCCC Q lcl|Aclame:pro 417 GGDTNGEVSKEGNE 430 (432) Q Consensus 417 gg~~~~~~~~~~~e 430 (432) +++.+++++++.+| T Consensus 459 ~~~~~~~~~~~~~e 472 (472) T protein:vir:93 459 GAQQQERSNNKESE 472 (472) T ss_pred CCCCCCCCCcccCC Confidence 22222222333333 No 179 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=98.63 E-value=1.7e-07 Score=57.69 Aligned_cols=386 Identities=10% Similarity=0.027 Sum_probs=179.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCc--------------cccc-HHHHhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST--------------ISVK-GKNALKVATVFACIKILSES 65 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--------------~~v~-~~~a~~~~~v~~~i~~ia~~ 65 (432) .-+.+.|.......+. ..-..+..++-..... .... ...=+.++....+++..+.. T Consensus 22 ~~~~~~i~~~~~~~~~---------~~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~Ivd~~~~~ 92 (479) T protein:vir:79 22 INLVKVIEHYILKHRP---------EKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQKVGY 92 (479) T ss_pred hHHHHHHHHHHhhhhH---------HHHHHHHHHhccCCcccccccccccccccccccccCcceeecchHHHHHHHHHhh Confidence 1111122221110000 0001111111000000 0000 00002245567778888888 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEE Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTV 145 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~ 145 (432) +.+-|+.+...++.. ..+...+.. | ........++...+.+|.+|..+..+..|.+. +..++|..+.+ T Consensus 93 l~g~p~~~~~~~~~~------~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~~-i~~~~p~~~~~ 160 (479) T protein:vir:79 93 SVGNPIVFNADDDNL------TKLLNDLLG--E---EFDDTITELYLNASNKGVEWLHPYINRKGEFK-YVIIPAEEAIP 160 (479) T ss_pred hhcCCceeccCCHHH------HHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEeCCCCceE-EEEEccceeEE Confidence 888887764322111 122233321 2 33555677888999999999999888877654 77788998888 Q ss_pred EEcCccc--eeccceeEEEecccCce----EEEccceEEEEecC------------------------------CC---- Q lcl|Aclame:pro 146 YIDDVGL--LNSKTKMWYVVNTGGQQ----RVLKPEEILHFKNG------------------------------IT---- 185 (432) Q Consensus 146 ~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~vih~~~~------------------------------~~---- 185 (432) +.+.... .......|.....++.. ..+.++.+.|++.. ++ T Consensus 161 v~d~~~~~~~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 240 (479) T protein:vir:79 161 IWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKV 240 (479) T ss_pred EEeCCCCCceEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcc Confidence 8765322 11111111111111111 11223333332210 00 Q ss_pred -----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec Q lcl|Aclame:pro 186 -----LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM 260 (432) Q Consensus 186 -----~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl 260 (432) .+...|.|-+..+...++....+.-...+.++..+.|-.++..-.....++ ..... ..++++.+ T Consensus 241 Pvv~~~nn~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~---~~~~~--------~~~~~i~~ 309 (479) T protein:vir:79 241 PFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQE---FIDNI--------RYYKSIKV 309 (479) T ss_pred cEEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcccccc---chhhh--------hhccceec Confidence 012357788887777777766666555666666667766655422211111 11111 12345556 Q ss_pred CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH----------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE----------QQQQQFYTDTLQATLTMY 330 (432) Q Consensus 261 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~----------~~~~~~~~~~l~P~~~~i 330 (432) +++.+++.+..+.....+....+...+.|+..-++|..-.+..++.+..... ......+...+..+++.+ T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li 389 (479) T protein:vir:79 310 DGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFV 389 (479) T ss_pred CCCCcceEEeccCCHHHHHHHHHHHHHHHHHHhCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 6665555554444455566778888899999989887544332222211111 122333444455555544 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--cceeeecccccccc Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNGNMLPID 408 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--gd~~~~~~n~~~~~ 408 (432) ...+..+-... .....+.+.+..-...+..+.++.+.++ .|+++...+.+++++-+.+. .+++. ..-.. T Consensus 390 ~~~~~~~~~~~---~~~~~i~i~f~~~~p~~~~~~a~~~~kl--~g~iS~et~l~~l~~v~d~~~E~~ri~--~E~~~-- 460 (479) T protein:vir:79 390 CEYLKISGNKS---YDYKTVQITFNHSMIINEAEKIDMAAKS--TGIVSDETIVSNHPWVEDVNDELERLK--KQEDT-- 460 (479) T ss_pred HHHHhccCCCc---cccccceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHH--HHHHH-- Confidence 44333211111 1112344555666677888899988887 48899888988887533211 11110 00000 Q ss_pred ccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 409 MAGQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 409 ~~~~~~~~gg~~~~~~~~~~ 428 (432) .......- +...+...+++ T Consensus 461 ~~~~~~~~-~~~~~~~~~e~ 479 (479) T protein:vir:79 461 QKEYDDLI-PNNQDGVIDET 479 (479) T ss_pred HHHHHhcc-CcccCCCcCcC Confidence 00000000 00000011111 No 180 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=98.62 E-value=1.8e-07 Score=57.52 Aligned_cols=411 Identities=9% Similarity=0.028 Sum_probs=187.7 Q ss_pred CchHHHHHHhccccc-cccccccccCCchHHHHHhhcCCcCc-----cccc---HHHHhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-RQTSQVIELNKDDEKLLEWLGISPST-----ISVK---GKNALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) |...+.|.++..... +... .-..+..++-..... .... ...=+..+.....++..+..+-+-|+ T Consensus 39 ~~~~~~i~~~i~~~~~~~~~-------r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~ 111 (511) T protein:vir:10 39 LQNVNEVSKCIEHHMDYQRP-------RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPI 111 (511) T ss_pred ccCHHHHHHHHHHHHHhhHH-------HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCc Confidence 333333333321000 0000 000011111000000 0000 00001235566777778887778888 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) .+...+++ ....+..++. . | ........+..+++.+|.+|.++..+.+|.+ .+..++|..+.++.++.. T Consensus 112 ~~~~~d~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~-~i~~~~p~~~~~vydd~~ 180 (511) T protein:vir:10 112 QYQDDDKD-----VLEAIEAFND-L-N---DVESHNRSLGLDLSIYGKAYEIMIRNQDDET-RLYKSDAMSTFVIYDNTI 180 (511) T ss_pred eeecCchH-----HHHHHHHHHh-h-c---CHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCC Confidence 86432211 1122223222 1 2 3345667788999999999999998888864 567788888888876543 Q ss_pred cee-ccceeEEEec-ccC---c----eEEEccceEEEEecCC----------------C---------CCcccccCHHHH Q lcl|Aclame:pro 152 LLN-SKTKMWYVVN-TGG---Q----QRVLKPEEILHFKNGI----------------T---------LDGLVGVPTMEY 197 (432) Q Consensus 152 ~~~-~~~~~~~~~~-~~~---~----~~~~~~~~vih~~~~~----------------~---------~~~~~G~s~~~~ 197 (432) ... .....+|... ..+ . ...+.++.+.++.... + .+...|.|-+.. T Consensus 181 ~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd~e~ 260 (511) T protein:vir:10 181 ERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEK 260 (511) T ss_pred CCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCchhh Confidence 211 1111111110 000 0 0123344443332110 0 012357888888 Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccc-ccceeecCCCceeeecCCChhHH Q lcl|Aclame:pro 198 LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQN-SHRIALMPVGYQFQPISLNMSDA 276 (432) Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n-~g~~~vl~~g~~~~~~~~~~~d~ 276 (432) +...++....+.-...+.+...+.|-.++.-....++++.....+.-.-....... .+...-.++|.+++.++....+. T Consensus 261 v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 340 (511) T protein:vir:10 261 VITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQ 340 (511) T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecCCHH Confidence 87777776666555555666667776666654444444443332211111110000 11112234456666565555555 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccCc-cccccccH----------HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNI----------EQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 345 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~----------~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 345 (432) .+....+...+.|+..-++|....+.. ++.++... ......++...+.-.++.|...+...--.... . T Consensus 341 ~~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~-~ 419 (511) T protein:vir:10 341 GTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDAN-K 419 (511) T ss_pred HHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc-c Confidence 566788888899999999987554322 22221111 11223444445555555554444322110000 0 Q ss_pred chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCCCCCC Q lcl|Aclame:pro 346 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGGDTNG 422 (432) Q Consensus 346 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~~~~~~~~~~~~gg~~~~ 422 (432) .-..+++.+..-...|..+.++.+.++. |+++..-+.+++++-+.+ ..+++..-. ...+..........++..++ T Consensus 420 d~~~i~i~f~~~~p~d~~~~~~~~~kl~--G~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~ 497 (511) T protein:vir:10 420 DFNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDD 497 (511) T ss_pred ccceeeEEeCCCCCcCHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC Confidence 1113455556667888999999999884 789988888888654322 111110000 00000000000111111111 Q ss_pred CCCCCCCCCC Q lcl|Aclame:pro 423 EVSKEGNEGN 432 (432) Q Consensus 423 ~~~~~~~e~~ 432 (432) +.++++.+.. T Consensus 498 ~~~~~~~~~~ 507 (511) T protein:vir:10 498 EQDDDTKDTV 507 (511) T ss_pred CCCCcccCcc Confidence 1111111111 No 181 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=98.56 E-value=2.7e-07 Score=56.56 Aligned_cols=406 Identities=12% Similarity=0.034 Sum_probs=189.2 Q ss_pred CchHHHHHHhccccc-cccccccccCCchHHHHHhh-cCCc-------CcccccHHHHhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-RQTSQVIELNKDDEKLLEWL-GISP-------STISVKGKNALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-g~~~-------~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) +..+++|+++....+ +.... -..+..+. |... ....-....-+..+....+++..+..+-.-|+ T Consensus 38 ~~~~~~l~~~i~~~~~~~~~r-------~~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~ 110 (501) T protein:vir:27 38 VNNWELLKNFINHHKLRQAPR-------IQELLDYARGENHDVLQFGRRKDREMADKRAVHNYGRMISKFKTGYLAGNPI 110 (501) T ss_pred cccHHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCccccccCccCccccccceeccchHHHHHHHHhhhhcccCe Confidence 444444544321100 00000 00011111 1000 00000000112356677788888888888888 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) .+...+++.. ..+...|. +-...-........++.+++.+|.+|+.+.++.+|.+ .+..++|..+.++.+... T Consensus 111 ~~~~~d~~~~-----~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~-~i~~~~p~~~~~v~d~~~ 183 (501) T protein:vir:27 111 RVEYDDNDNN-----SQNDDTIK-RIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNEYDET-RIKRLNPLETFVIYDNSL 183 (501) T ss_pred eEecCCccch-----HHHHHHHH-HHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCCCCce-EEEEEccceeEEEecCCC Confidence 7754433221 12222222 1111224456788899999999999999999888865 467788888888776532 Q ss_pred ce-eccceeEEEec-ccCc---eEEEccce------------------------EEEEecCCCCCcccccCHHHHHHHHH Q lcl|Aclame:pro 152 LL-NSKTKMWYVVN-TGGQ---QRVLKPEE------------------------ILHFKNGITLDGLVGVPTMEYLKSTL 202 (432) Q Consensus 152 ~~-~~~~~~~~~~~-~~~~---~~~~~~~~------------------------vih~~~~~~~~~~~G~s~~~~~~~~~ 202 (432) .. ......+|... ..+. ...+.++. |+++++ ...|.|.+..+...+ T Consensus 184 ~~~~~~~ir~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----n~~g~sd~e~v~~li 258 (501) T protein:vir:27 184 EDNSIAAVRYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLN-----NVDGIGDYETELYLI 258 (501) T ss_pred CCceEEEEEEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecC-----CCCCCCchhhhHHHH Confidence 11 11111111111 1111 11122222 333321 236888888877777 Q ss_pred HHHHHHHHHHHHHHhccCCcceEEEeCCCC-CHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHH Q lcl|Aclame:pro 203 ENSASADKFINNFYKQGLQVKGLVQYVGDL-NEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLEN 281 (432) Q Consensus 203 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~ 281 (432) +....+.-.....+.....|-.++...... .++....++... .-.....+......++.+++.++....+..+... T Consensus 259 Da~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 335 (501) T protein:vir:27 259 DLYDSAESDTANHMSDMADAILAIYGDLALPKGMQASDMKRTR---LMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAY 335 (501) T ss_pred HHHHHHHHHHHHHHHHhcCceeeeecCccCCcccchhhhhhcC---ceeecccccccCCCCCcceeeeeccCCHHHHHHH Confidence 777766666666666666666666543222 222222222110 0000111122223455566665555555556677 Q ss_pred HHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhh Q lcl|Aclame:pro 282 TELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYS 350 (432) Q Consensus 282 ~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~ 350 (432) .+...+.|+..-++|....+.. ++.++.... ......+...+..+++.+...++..--... .....+ T Consensus 336 ~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~--~d~~~i 413 (501) T protein:vir:27 336 KTRLNRDIHIFTNIPDMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKD--FDESLL 413 (501) T ss_pred HHHHHHHHHHHhCCcccCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--cccccc Confidence 8888899999999987554322 222211111 122234444555555554444332111111 111224 Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeec-cccccccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 351 KFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVN-GNMLPIDMAGQAYLKGGDTNGEVSKE 427 (432) Q Consensus 351 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~-~n~~~~~~~~~~~~~gg~~~~~~~~~ 427 (432) .+.+..-+..+..+.++.+.++ .|+++..-+.+++++-..| ..+++..- ....+....+.-....|...+++++. T Consensus 414 ~v~f~~~~p~n~~e~ad~~~kl--~g~iS~et~l~~l~~v~D~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~d~~~~~ 491 (501) T protein:vir:27 414 KITFTPNLPKSLNEQVSILTGL--GGQVSQETALSLSGLVESPNEELDKINKEVSEIDFKGYSNDFNEHVGKYTDEVKET 491 (501) T ss_pred eEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhHhhhcCccccccccccCCCCCC Confidence 4555677778888899988887 5889988888888654321 11111000 00000000000001112222222222 Q ss_pred CCCCC Q lcl|Aclame:pro 428 GNEGN 432 (432) Q Consensus 428 ~~e~~ 432 (432) .+++. T Consensus 492 ~~d~~ 496 (501) T protein:vir:27 492 HTDDF 496 (501) T ss_pred ccccc Confidence 22222 No 182 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=98.56 E-value=2.7e-07 Score=56.56 Aligned_cols=384 Identities=10% Similarity=0.009 Sum_probs=181.6 Q ss_pred Cch---HHHHHHhccccccccccccccCCchHHHHHhhcCC-cCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKI---VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS-PSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) ... ++++.+....... .+... ....+ + .=+.++....+++..+..+-.-|+.+... T Consensus 39 ~~~~~~~~~l~~Yy~g~~~-----------------i~~~~~~~~~~-~--~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~ 98 (470) T protein:vir:99 39 TVLKPRYRENMKLYLGKHK-----------------ILTAPEKETGA-D--NRIVVNSAKYVVDVYNGYFCGIEPKLALL 98 (470) T ss_pred HhhHHHHHHHHHHhccccc-----------------cccCcccccCC-c--ceeecchHHHHHHHHhhhhccCCeeEeeC Confidence 111 1111111111000 00000 00000 0 01224566777788888777778776432 Q ss_pred cCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceecc Q lcl|Aclame:pro 77 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSK 156 (432) Q Consensus 77 ~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~~ 156 (432) +++.. ...+..++. ..........++...+.+|.+|+.+..+.+|.+ .+..++|..+.++.+........ T Consensus 99 ~d~~~----~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d~~~~~~~~ 168 (470) T protein:vir:99 99 NDSSK----IDEIARWNR-----QENFFDTINEISKQCDIFGRSIASIYQGEDARP-HLMYSSPNHAFIIYDDTVQRQPL 168 (470) T ss_pred CchhH----HHHHHHHHH-----hcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCeE-EEEEEccceeEEEEcCCCCcceE Confidence 22110 112333332 224556778899999999999999988888875 47778999988887764321111 Q ss_pred c-eeEEEecccCc----eEEEccceEEEEec-------------CC---------CCCcccccCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 157 T-KMWYVVNTGGQ----QRVLKPEEILHFKN-------------GI---------TLDGLVGVPTMEYLKSTLENSASAD 209 (432) Q Consensus 157 ~-~~~~~~~~~~~----~~~~~~~~vih~~~-------------~~---------~~~~~~G~s~~~~~~~~~~~~~~~~ 209 (432) . ..++....++. ...+..+.+.++.. .+ ..+...|.|-+..+...++....+. T Consensus 169 ~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~~~~ 248 (470) T protein:vir:99 169 AFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIKTLINALDKVI 248 (470) T ss_pred EEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHHHHHHHHHHHH Confidence 1 11111111111 11122333332210 00 0123468888887777777777666 Q ss_pred HHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec-----CCCceeeecCCChhHHHHHHHHHH Q lcl|Aclame:pro 210 KFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM-----PVGYQFQPISLNMSDAQFLENTEL 284 (432) Q Consensus 210 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~ 284 (432) -.....+...+.|..++.-.....++..+... .+.. .+++.+ +++.++..+........+....+. T Consensus 249 s~~~~~~~~~~~~~~~i~g~~~~~~~~g~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 319 (470) T protein:vir:99 249 SQKANQVEYFDNAYMYMIGFKLPEDDEGNPKF-DFKN--------NRVLYVSQLDPDTNPQIGFIAKPDADQMQENLIQH 319 (470) T ss_pred HHHHHHHHHhcCceeeeecCCcccccccchhh-hhhh--------cceeeecCCCCCCCCcceEEeecCChHHHHHHHHH Confidence 66666666777776666543322222211111 1111 112222 234455555544444555677888 Q ss_pred HHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhh Q lcl|Aclame:pro 285 TIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFN 353 (432) Q Consensus 285 ~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd 353 (432) ..+.|+..-++|....... ++.+...... .....+...+..+++.+...+..+.-... ....+.+. T Consensus 320 l~~~i~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~---~~~~i~v~ 396 (470) T protein:vir:99 320 LTDFIFMMAMVPNIQDKNFAGNSSGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQE---LWSELDFK 396 (470) T ss_pred HHHHHHHHhCCccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc---ccccceEE Confidence 9999999999987554322 2222111111 12234444455555444444332211111 11234455 Q ss_pred hhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 354 VDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPP-EAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 354 ~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p-~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +..-...+..+.++.+.++. |+++...++++++.-. ....+++..-. -...+ ......+..+....+..+|++ T Consensus 397 f~~~~p~~~~e~a~~~~kl~--giis~et~l~~l~~vd~~~E~eri~~E~-~~~~~---~~~~~~~~~d~~~~d~~~ee~ 470 (470) T protein:vir:99 397 FTRNLPEDMASAIDNAKNAE--GIVSKKTQLGMIPDIEPDAEMKQIAKEK-ADAIK---QTQQLSMPIDILKRDNNAEEE 470 (470) T ss_pred eCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhCCCCCHHHHHHHHHHHH-HHHHH---HHHhhcCCCCcCCCCCCccCC Confidence 56667788889999988884 7899888888876531 11112111000 00000 000111111111111222222 No 183 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=98.56 E-value=2.8e-07 Score=56.50 Aligned_cols=410 Identities=9% Similarity=0.026 Sum_probs=186.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC----------cccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----------TISVKGKNALKVATVFACIKILSESVSKLP 70 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~ 70 (432) +...+.|+++...... ... ..-..+..++-.... ......+ +........++..+..+-+-| T Consensus 39 ~~~~~~i~~~i~~~~~---~~~---~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~k--i~~n~~k~Iv~~~~~yl~g~p 110 (511) T protein:vir:96 39 LQNVNEVSKYIEHHMD---YQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNR--VAHDYASYISDFINGYFLGNP 110 (511) T ss_pred hccHHHHHHHHHHHHH---hhH---HHHHHHHHHhcccCccccccCcCcccccCcce--eecchHHHHHHHHHhhhccCC Confidence 1122223222110000 000 000001111100000 0000000 123556667788888888888 Q ss_pred eEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCc Q lcl|Aclame:pro 71 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 150 (432) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~ 150 (432) +.+...+++ ....+..++. .-........+..+++.+|.+|.++.++.+|.+ .+.+++|..+.++.+.. T Consensus 111 ~~~~~~~~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vydd~ 179 (511) T protein:vir:96 111 IQYQDDDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNT 179 (511) T ss_pred ceeecCchH-----HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCC Confidence 886432211 1122233222 223456677888999999999999998888764 56778899988887654 Q ss_pred ccee-ccceeEEEec-ccC---c----eEEEccceEEEEecCC-------------------------CCCcccccCHHH Q lcl|Aclame:pro 151 GLLN-SKTKMWYVVN-TGG---Q----QRVLKPEEILHFKNGI-------------------------TLDGLVGVPTME 196 (432) Q Consensus 151 ~~~~-~~~~~~~~~~-~~~---~----~~~~~~~~vih~~~~~-------------------------~~~~~~G~s~~~ 196 (432) .... .....+|... ..+ . ...+.++.+.++.... ..+...|.|-+. T Consensus 180 ~~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd~e 259 (511) T protein:vir:96 180 IERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYE 259 (511) T ss_pred CCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCchh Confidence 2111 1111111110 000 0 0123344443332110 001236788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc-cccceeecCCCceeeecCCChhH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ-NSHRIALMPVGYQFQPISLNMSD 275 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d 275 (432) .+...++....+.....+.+...+.|-.++.-....+.++.....+.-.-...... -.+...-.+++.++..+...... T Consensus 260 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (511) T protein:vir:96 260 KVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDV 339 (511) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCccCCchhhcccccccceecccccccccccccCCCCcceeEEeecCCH Confidence 88777777666666666666666677666665444444443322211111000000 00111123345556555544445 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhh Q lcl|Aclame:pro 276 AQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSEL 344 (432) Q Consensus 276 ~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~ 344 (432) ..+....+...+.|+..-++|....+.. ++.++..... .....+...+...++.|...+..+.-..... T Consensus 340 ~~~e~~~~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~ 419 (511) T protein:vir:96 340 QGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANK 419 (511) T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccc Confidence 5567788888999999999987654322 2222111111 2234444455555555554433221110000 Q ss_pred cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCCCCC Q lcl|Aclame:pro 345 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 345 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~~~~~~~~~~~~gg~~~ 421 (432) .-..+++.+..-...|..+.++.+.++ .|+++...+.+++++-+.+ ..+++..-. ...+..........++..+ T Consensus 420 -d~~~i~~~f~~~~p~n~~e~~~~~~kl--~G~iS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~ 496 (511) T protein:vir:96 420 -DFNTVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDIND 496 (511) T ss_pred -ccccceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC Confidence 011344445666678888889988887 6889998899988764432 111110000 0000000000011111111 Q ss_pred CCCCC----CCCCCC Q lcl|Aclame:pro 422 GEVSK----EGNEGN 432 (432) Q Consensus 422 ~~~~~----~~~e~~ 432 (432) ++.++ ..+|.. T Consensus 497 ~~~~~~~~~~~~~~~ 511 (511) T protein:vir:96 497 DEQDDDTKDTVDKKE 511 (511) T ss_pred CCCCCcccccccccC Confidence 11111 111111 No 184 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=98.55 E-value=3e-07 Score=56.35 Aligned_cols=390 Identities=10% Similarity=-0.014 Sum_probs=180.4 Q ss_pred hHHHH-----------HHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 3 IVDSV-----------KKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 3 ~~~~l-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~ 71 (432) |+..+ .+........ +.. -.......... .=+..+.....|+..+..+-+-|+ T Consensus 1 ~~~~~~~~~~~r~~~l~~yy~g~~~~-------------~~~-~~~~~~~~~~~--~ki~~n~~~~ivd~~~~~l~g~~~ 64 (440) T protein:vir:95 1 MLAAFLGSQKQRLAILASYAQGDNFS-------------ILS-GHRRLDDEKAD--YRVRHKWGGYISSFATGYVIGNPV 64 (440) T ss_pred ChhhHHHHHHHHHHHHHHHhccCCcc-------------ccc-ccccccccCCc--ceeecchHHHHHHhhhhheeccCc Confidence 33222 1111110000 000 00000000000 012345566677777777777777 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) ++...+.+..+ ....+...+. ..........+..+.+.+|.+|+.+..+.+|.+ .+..++|..+.++.+... T Consensus 65 ~~~~~~~~~~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~i~~~~p~~~~~~~d~~~ 136 (440) T protein:vir:95 65 SIGVMEGGSAD--QLSTIKDIEW-----QNDINALNSDLAFDASVYGRAYEYHFRDKDKVD-RVVLISPLEMFVIRDLTV 136 (440) T ss_pred eEeeCCCccHH--HHHHHHHHHH-----hcCHhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCC Confidence 76432221111 1112222222 113345566788899999999999988888865 466788999888877543 Q ss_pred ceecc-ceeEEEecccCceEEEccceEEEEecC--------------CC---------CCcccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 152 LLNSK-TKMWYVVNTGGQQRVLKPEEILHFKNG--------------IT---------LDGLVGVPTMEYLKSTLENSAS 207 (432) Q Consensus 152 ~~~~~-~~~~~~~~~~~~~~~~~~~~vih~~~~--------------~~---------~~~~~G~s~~~~~~~~~~~~~~ 207 (432) ..... ...++..........+..+.+++++.. ++ .+...|.|-+..+...++.... T Consensus 137 ~~~~~~~i~~~~~~~~~~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~lida~~~ 216 (440) T protein:vir:95 137 EQNIIAAVHLPIYADKVNMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWNNRFRMGDYESEISLIDAYDA 216 (440) T ss_pred CCceEEEEEEEEecCceEEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeCCCCCCCchhhhHHHHHHHHH Confidence 21111 111111111111122333333332100 00 0123577888877777777776 Q ss_pred HHHHHHHHHhccCCcceEEEeC---CCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHH Q lcl|Aclame:pro 208 ADKFINNFYKQGLQVKGLVQYV---GDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTEL 284 (432) Q Consensus 208 ~~~~~~~~~~n~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~ 284 (432) +.....+..+..+.|..+++.. ...++++...+++.-.-.... .......+++.+++.+........+....+. T Consensus 217 ~~s~~~~~~~~~~~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~ 293 (440) T protein:vir:95 217 GQSDTANYMSDLNDAMLLVKGDLDGIKLSPEDAAKMKDANMLFLKT---GISTTGQQTTADASYIYKQYDVNGTEAYKNR 293 (440) T ss_pred HHHHHHHHHHHhhcceeeeecccccCCCCccchhhhhhccceeccc---ccccccCCCCcceeEEeecCCHHHHHHHHHH Confidence 6666666666667776666543 223455554443322211110 0111112333344444333334446678888 Q ss_pred HHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhh Q lcl|Aclame:pro 285 TIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFN 353 (432) Q Consensus 285 ~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd 353 (432) ..+.|+..-++|..-.+.. ++.+...... .....+...+..+++.|...+...- ... .....+++. T Consensus 294 l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~-~~~--~~~~~v~i~ 370 (440) T protein:vir:95 294 LANDIHRFSRIPNLDDDRFNSTSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAIN-GPV--IEANKLTFT 370 (440) T ss_pred HHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Ccc--cccccceEE Confidence 8999999999987544322 2222111111 2233444445555555444433211 111 112234455 Q ss_pred hhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC-CcceeeeccccccccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 354 VDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA-GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEG 428 (432) Q Consensus 354 ~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~-~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~ 428 (432) +..-...+..+.++.+.++ .|+++..-+.++++.-..+ ...+.. ..- .. ...+.....++.++...++. T Consensus 371 f~~~~p~~~~~~ad~~~kl--~g~iS~et~~~~l~~~d~~~E~~ri~--~E~-~~-~~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 371 FHPNIPQDVWTEIKAYIEA--GGEISQETLMENASFTDYKTEHSRIL--KQG-GS-SDLEIGQIVGDADVGQADTE 440 (440) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCCCCcHHHHHHHH--HHH-HH-hhhhHHhhccCCCCCCcCCC Confidence 5666788899999999888 5789887788887653211 111110 000 00 00000111111111111111 No 185 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=98.52 E-value=3.9e-07 Score=55.73 Aligned_cols=408 Identities=9% Similarity=0.020 Sum_probs=184.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCc-----cccc---HHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPST-----ISVK---GKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) +..+..+......... . .-..+..++-..... .... ...=+..+.....++..+..+-+-|+. T Consensus 42 ~~~i~~~i~~~~~~~~--~-------r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~ 112 (512) T protein:vir:97 42 INEVSKYIEHHMDYQR--P-------RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQ 112 (512) T ss_pred HHHHHHHHHHHHHhhH--H-------HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCce Confidence 1111111111000000 0 000011111000000 0000 000012355666778888878788887 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) +...+++ ....+..++. .-........+..+++.+|.+|.++.++.+|.+ .+..++|..+.++.+.... T Consensus 113 ~~~~d~~-----~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~-~i~~~~p~~~~~iyd~~~~ 181 (512) T protein:vir:97 113 CQDDDKD-----VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIE 181 (512) T ss_pred eccCChH-----HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcCCCC Confidence 6432211 1122223222 123456667788999999999999999888865 4678899998888775431 Q ss_pred ee-ccceeEEEec-ccC-------ceEEEccceEEEEecCC----------------C---------CCcccccCHHHHH Q lcl|Aclame:pro 153 LN-SKTKMWYVVN-TGG-------QQRVLKPEEILHFKNGI----------------T---------LDGLVGVPTMEYL 198 (432) Q Consensus 153 ~~-~~~~~~~~~~-~~~-------~~~~~~~~~vih~~~~~----------------~---------~~~~~G~s~~~~~ 198 (432) .. .....+|... ..+ ....+.++.+.+++... + .+...|.|-+..+ T Consensus 182 ~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v 261 (512) T protein:vir:97 182 RNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKV 261 (512) T ss_pred CceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhh Confidence 11 1111111110 110 01123444444432110 0 0123578888888 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc--cccceeecCCCceeeecCCChhHH Q lcl|Aclame:pro 199 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ--NSHRIALMPVGYQFQPISLNMSDA 276 (432) Q Consensus 199 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--n~g~~~vl~~g~~~~~~~~~~~d~ 276 (432) ...++....+.--..+.+...+.|-.++.-....++++....+....-...... +.+...-.++|.+++.+....... T Consensus 262 ~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 341 (512) T protein:vir:97 262 ITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQ 341 (512) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecCccCCchhhhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHH Confidence 888877776666555566666777666665444444444333322211111111 111112234566666555544455 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhh Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFL-DSEL 344 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~-~~~~ 344 (432) .+....+...+.|+..-++|..-.+.. ++.++.... ......+...+.-.++.|...+...--. .... T Consensus 342 ~~e~~~~~L~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d 421 (512) T protein:vir:97 342 GTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKD 421 (512) T ss_pred HHHHHHHHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc Confidence 556778888899999999987654322 111211111 1223333334444444443333211100 0000 Q ss_pred cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCCCCC Q lcl|Aclame:pro 345 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 345 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~~~~~~~~~~~~gg~~~ 421 (432) .. .+.+.+..-...+..+.++.+.++ .|+++..-+++++++-+.+ ..+++..-. ...+.........+++..+ T Consensus 422 ~~--~i~~~f~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~ 497 (512) T protein:vir:97 422 FN--TVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDIND 497 (512) T ss_pred cc--cceEEeCCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC Confidence 11 234444555677888888888888 4889988888888764322 111110000 0000000001111112222 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 422 GEVSKEGNEGN 432 (432) Q Consensus 422 ~~~~~~~~e~~ 432 (432) ++.+.++++.. T Consensus 498 ~~~~~~~~~~~ 508 (512) T protein:vir:97 498 DEQDDDTKDTV 508 (512) T ss_pred CCCCCCccccc Confidence 22222222222 No 186 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=98.50 E-value=4.4e-07 Score=55.43 Aligned_cols=384 Identities=10% Similarity=0.045 Sum_probs=168.7 Q ss_pred Cch------------HHH----------------------------HHHhccccccccccccccCCchHHHHHhhcCCcC Q lcl|Aclame:pro 1 MKI------------VDS----------------------------VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS 40 (432) Q Consensus 1 Mg~------------~~~----------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 40 (432) |.| +++ +.+............. .. ..-+.... T Consensus 2 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~yY~g~~~i~~~~~-~~-------~~~~~~~~ 73 (478) T protein:vir:10 2 ISINWPWDKPYHEQVVEQIKPKYETQEEMILRLVREHKENIDNITMGERYYNHHPDILDAPP-KR-------DVNGDYDE 73 (478) T ss_pred ccccCCCCchhHHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcccc-cc-------cccccccc Confidence 111 111 1122111100000000 00 00000000 Q ss_pred cccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe Q lcl|Aclame:pro 41 TISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 120 (432) Q Consensus 41 ~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~ 120 (432) ..+. .=+.++....+++..+..+-+-|+.+...+++. ...+...+. | ........++.+++.+|.+ T Consensus 74 ~~~~---~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~d~~-----~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~ 139 (478) T protein:vir:10 74 TKPD---WRMYTNYHQNLVDQKVAYAVANPVTFGVDNDKA-----LKQIQHTLN---H---KWDDKLVDILTAASNKGIE 139 (478) T ss_pred cccc---ceeccchHHHHHHHHHhhhccCCeeeecCChHH-----HHHHHHHHh---c---CHHHHHHHHHHHHHhcCeE Confidence 0000 001235566777888887777888764322211 112223222 2 3456667788999999999 Q ss_pred EEEEeeCCCCceEEEEEEcCcceEEEEcCcccee-ccceeEEEecccCceEEEccceEEEEecC---------------- Q lcl|Aclame:pro 121 YANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------- 183 (432) Q Consensus 121 ~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------- 183 (432) |+.+..+..|.+ .+..++|..+.++.+...... .....+|..........+.++.+.+++.. T Consensus 140 ~~~~~~d~~g~~-~~~~~~p~~~~~i~d~~~~~~~~~~v~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~ 218 (478) T protein:vir:10 140 WVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERDELQAFIRVYELDGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQ 218 (478) T ss_pred EEEEEecCCCee-EEEEEcccceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCeeeccccccccccc Confidence 999988888865 467788888888776432111 11111111111111112223333222110 Q ss_pred ---------CCC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 184 ---------ITL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFE 245 (432) Q Consensus 184 ---------~~~---------~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (432) ++. +..+|.|-+..+...++....+.-...+.++..+.|-.++.--......+ ....+. T Consensus 219 ~~~~~~~~~~~~~~vPvv~~~n~~~g~sd~~~v~~liDa~~~~~S~~~~~~~~~~~p~~~~~g~~~~~~~~---~~~~~~ 295 (478) T protein:vir:10 219 PHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEGEDMKD---FMHNLK 295 (478) T ss_pred cceecccccccCCccceEEeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccch---hhhhhh Confidence 000 23468887777777777666655555555566666655554332211111 111111 Q ss_pred HHhcccccccceeec--CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH---------- Q lcl|Aclame:pro 246 SMSSGLQNSHRIALM--PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE---------- 312 (432) Q Consensus 246 ~~~~g~~n~g~~~vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~---------- 312 (432) .++++.+ +.|.++..+........+....+...+.|...-++|..-.... ++.++.... T Consensus 296 --------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~ 367 (478) T protein:vir:10 296 --------YYKAISVAGESGSGVDTIKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKA 367 (478) T ss_pred --------hcceEEecCCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHH Confidence 1122222 2233333333333344556778888888998888876443221 111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 313 QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE 392 (432) Q Consensus 313 ~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~ 392 (432) ......+...+..+++.|...+ ....-...+.+. +..-...|..+.++.+.++ +|+++...+++++++-.. T Consensus 368 ~~~~~~~~~~l~~~~~li~~~~-----g~~~~~~~i~i~--f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~D 438 (478) T protein:vir:10 368 NKLKNKTLTALQELLQYIIDFY-----RLDVKVQDIEIT--FNFNVMVNELENSQIAMNS--TGLLSKETILSNHAWVED 438 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCcccccceEE--ecCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCC Confidence 1122333333334333333222 111111223344 4555667888889988887 788999889999976432 Q ss_pred C--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 A--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 393 ~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) + ..+++..- +-....... ....+ ..++. +..+++| T Consensus 439 ~~~E~~ri~~E-~~~~~~~~~--~~~~~-~~~~~-~~~~~~~ 475 (478) T protein:vir:10 439 PVAEMERIEQE-NIELNQQLP--DIEEG-LNGEQ-QRQSENN 475 (478) T ss_pred HHHHHHHHHHH-HHHHHhhcc--ccccc-cCCCC-CCCCCCC Confidence 2 11211100 000000000 00111 11111 1111111 No 187 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=98.48 E-value=5e-07 Score=55.11 Aligned_cols=391 Identities=8% Similarity=0.013 Sum_probs=181.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-cC------Cc------CcccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GI------SP------STISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~------~~------~~~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) |-..+.|+++.......... ...+...+ |. .. .........=+..+....+++..+..+- T Consensus 43 ~~~~~~i~~~i~~~~~~~~r-------~~~l~~YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~ 115 (492) T protein:vir:94 43 ETLEEMIVRYIKQHLEKLPE-------ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIV 115 (492) T ss_pred hhHHHHHHHHHHHHHHHHHH-------HHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHHhhhc Confidence 33333333322100000000 00001111 00 00 0000000011235667777888888887 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) +-|+.+...+++. ...+...+. | ........++.+++.+|.+|..+..+.+|.+ .+..++|..+.++. T Consensus 116 G~p~~~~~~d~~~-----~~~l~~~~~---n---~~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~v~ 183 (492) T protein:vir:94 116 GKPIAFKHTDDEV-----VKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIW 183 (492) T ss_pred ccCceeccCchHH-----HHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEE Confidence 7887764322111 112222221 2 2345567788999999999999988888865 46778999888877 Q ss_pred cCccce-eccceeEEEecccCceEEEccceEEEEecC---------------------CCC---------CcccccCHHH Q lcl|Aclame:pro 148 DDVGLL-NSKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTME 196 (432) Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------------~~~---------~~~~G~s~~~ 196 (432) +..... ......+|..........+....|.++... ++. +...|.|-+. T Consensus 184 d~~~~~~~~a~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e 263 (492) T protein:vir:94 184 TDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIF 263 (492) T ss_pred cCCCCCceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchH Confidence 643211 111111222111111222233333332210 000 1235788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDA 276 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~ 276 (432) .+...++....+.-...+.++..+.|..++.--.. ++.......+. ..+++.++++.+++.+....... T Consensus 264 ~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~ 332 (492) T protein:vir:94 264 MYKTLIDAYNRRLSDLSNTFKDSNELTYVLKNYDD---QELPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVE 332 (492) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc---ccchhhHHHHh--------hccceecCCCCcceeEeccCCHH Confidence 88888887776666666666777777666653222 22222222211 12334445554444443333444 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 345 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 345 (432) .+....+...+.|+..-++|..-... .++.++..... .....+...+..+++.+...+.. .... T Consensus 333 ~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~-----~~~~ 407 (492) T protein:vir:94 333 NSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KGEH 407 (492) T ss_pred HHHHHHHHHHHHHHHHhCCcCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----Cccc Confidence 45667778888888888887643321 11111111111 12233334444444444433321 1112 Q ss_pred chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc--ccccccccccccCCCCCCC Q lcl|Aclame:pro 346 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG--NMLPIDMAGQAYLKGGDTN 421 (432) Q Consensus 346 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~--n~~~~~~~~~~~~~gg~~~ 421 (432) . .+.+.+..-+..+..+.++.+.++ .|+++..-+++++++-+.+ ..++...-. ..............++..+ T Consensus 408 ~--~i~v~f~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~ 483 (492) T protein:vir:94 408 K--DVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGGADSAQQQ 483 (492) T ss_pred c--eeeEEecCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCccc Confidence 2 334444666778888999998888 4889988899998764322 222211000 0001111111111222223 Q ss_pred CCCCCCCCC Q lcl|Aclame:pro 422 GEVSKEGNE 430 (432) Q Consensus 422 ~~~~~~~~e 430 (432) ++++++++| T Consensus 484 ~~~~~~e~e 492 (492) T protein:vir:94 484 ERSNNKESE 492 (492) T ss_pred cCCccccCC Confidence 333333333 No 188 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=98.46 E-value=5.7e-07 Score=54.82 Aligned_cols=409 Identities=11% Similarity=0.055 Sum_probs=182.2 Q ss_pred CchHHHHHHhccccccccccccccCCc-----------------hHHHHHhh-cCCcCccc----c-c----HHHHhccH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKD-----------------DEKLLEWL-GISPSTIS----V-K----GKNALKVA 53 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-g~~~~~~~----v-~----~~~a~~~~ 53 (432) |+.++-++.......--.......... ...+..+. |....... . . ...-+.++ T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki~~n 85 (481) T protein:vir:10 6 INNINTKFSPLANDDFVVSDLAELLKEENLRNFISRHQTEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRAVHN 85 (481) T ss_pred eehhchhcccccCceeeeecchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCccccccccccccceeecc Confidence 555554444332111000000000000 00111111 21110000 0 0 00012346 Q ss_pred HHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceE Q lcl|Aclame:pro 54 TVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ 133 (432) Q Consensus 54 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~ 133 (432) ....+++..+..+..-|+.+...+++ ....+..++.. | ....+...++.+.+.+|.+|+.+..+.+|.+ T Consensus 86 ~~~~ivd~~~~~l~g~~~~~~~~d~~-----~~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~~~~d~dg~~- 154 (481) T protein:vir:10 86 YAKYVSRFIVGYLTGNPITITHQDNQ-----TNDKIIELNDL--N---DADEVNSDLALNLSIYGRAYEIVYRDFEDRD- 154 (481) T ss_pred hHHHHHHHHHhhhccCCceEecCChh-----HHHHHHHHHHh--c---ChhHHHHHHHHHHHhcCeEEEEEEeCCCCeE- Confidence 67778888888777777765432221 12234444432 2 3457788899999999999999988888865 Q ss_pred EEEEEcCcceEEEEcCcccee-ccceeEEEec-ccCce----EEEccceEEEEecC-----------CCC---------C Q lcl|Aclame:pro 134 ALWPIDASKVTVYIDDVGLLN-SKTKMWYVVN-TGGQQ----RVLKPEEILHFKNG-----------ITL---------D 187 (432) Q Consensus 134 ~l~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~-~~~~~----~~~~~~~vih~~~~-----------~~~---------~ 187 (432) .+..++|..+.++.+...... .....+|... .++.. ..+.++.+.+++.. ++. + T Consensus 155 ~i~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n 234 (481) T protein:vir:10 155 TFKVLDPKSTFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLN 234 (481) T ss_pred EEEEEcccceEEEEcCCCCCceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeec Confidence 577889999888876543211 1111111111 11110 12333333333211 000 1 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceee Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 267 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~ 267 (432) ...|.|-+..+...++............+...+.|..++......+++..+.++..-.-.. ... ......+++.+++ T Consensus 235 ~~~g~~~~~~v~~lida~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~ 311 (481) T protein:vir:10 235 DQFKQGDFENVIALIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLDSEDAKAFRDANMIHL--EPG-TNANGSEGKAEVK 311 (481) T ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCceeEeecCcCCCccchhhhhhccceec--ccc-ccccCCCCCccee Confidence 2357777776666666555544444444555566666665433334443333332110000 000 0011112233444 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc-ccccccHHHH----------HHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 268 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQ----------QQQFYTDTLQATLTMYEQEMTY 336 (432) Q Consensus 268 ~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~-~~~~~~~~~~----------~~~~~~~~l~P~~~~i~~~l~~ 336 (432) .+........+.+..+...+.|+..-++|....+... +.++...+.. ....+...+.-+++.+...++. T Consensus 312 ~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~ 391 (481) T protein:vir:10 312 YVYKQYDVAGVEAYKKRLQNDIHKYTNTPDLNDEQFSGVQSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNL 391 (481) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 3333334455667888899999999999876654322 1111111111 1122222233333323222221 Q ss_pred hhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecccccccccccccc Q lcl|Aclame:pro 337 KLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAY 414 (432) Q Consensus 337 ~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~ 414 (432) .-... .....+.+.+..-...|..+.++.+.++ .|+++...+.+++++-..+ ..+++. +.- .+...... T Consensus 392 ~~~~~---~~~~~i~v~f~~~~~~~~~~~a~~~~kl--~g~is~et~~~~l~~i~d~~~E~~ri~--~E~--~~~~~~~~ 462 (481) T protein:vir:10 392 TGLKQ---HNYAELTITFTPNLPKSMMESINAFNAL--SGGVSESTRLSLLDFIDNPKEELEKMQ--EEE--AQREKQAD 462 (481) T ss_pred cCCCc---cccceeeEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHH--HHH--HHHHhhhh Confidence 11100 1112344444666778888999998888 4789888888888763321 111110 000 00000011 Q ss_pred CCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 415 LKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 415 ~~gg~~~~~~~~~~~e~~ 432 (432) ..+-....+.+.+.++|+ T Consensus 463 ~~~~~~~~~~~~~~dd~~ 480 (481) T protein:vir:10 463 KRGYGEAFENHLNVDDSN 480 (481) T ss_pred hccCCccCCCCCCCCCCC Confidence 111111111222233333 No 189 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=98.45 E-value=2e-09 Score=68.26 Aligned_cols=278 Identities=14% Similarity=0.122 Sum_probs=155.3 Q ss_pred HHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceE Q lcl|Aclame:pro 54 TVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ 133 (432) Q Consensus 54 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~ 133 (432) .....+.+.|++++=..|.+...+.+ ..-..+.-++..-.|.+.+-..-++.++.+.+..-+.| .+... |.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~- 72 (279) T protein:vir:40 1 MSLFNLSRRAEDVSFSTFTVQDPTTD----LLLGKLLGLVSYFDNVDYSEASKLEDLFYWALQGKEVY-RVWYG--GFK- 72 (279) T ss_pred CcccccchhhcccceeeeeecCcchh----HHHHHHHHHHHHhhcccchhhhhhhhhhhhhhccceee-hhhhh--hHH- Confidence 00112334455555555555432211 11123334444456666676666777776555333322 22111 100 Q ss_pred EEEEEcCcceEEEEcCccceeccceeEEEecccCceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 ALWPIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFIN 213 (432) Q Consensus 134 ~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 213 (432) ..+.+| ..|.. .........+.+++|-.++..|-+|. +|.-+- ....-+++. .+... T Consensus 73 ----~~~~~~--~~d~f--------n~~vr~~~~~~vtVP~~Dv~IieNPl-----v~v~~e-e~~kM~~la---~nai~ 129 (279) T protein:vir:40 73 ----YYAQRV--NADQF--------NIVVREPNRREVTIRTNDYEMLLNPF-----YGANPQ-RFGVMFGMA---SNGIG 129 (279) T ss_pred ----HHHhhc--Ccchh--------hhheecCCcceeEeecchhhhhhcch-----heeccc-hhhHHHHHH---Hhhhh Confidence 011111 11110 00111223344667777887776443 443322 222222222 33444 Q ss_pred HHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 214 NFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATA 292 (432) Q Consensus 214 ~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~ 292 (432) ..+.+.+..+++++++.+ ..++..++.+.++.++..++.+-+++.++++|.++++++-+.+-. ..+..++.+.+.++. T Consensus 130 ~KLD~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityid~~ddItQL~kDYSts-lk~die~lkS~l~Sq 208 (279) T protein:vir:40 130 RRLDSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVIGSDDDIKQIQPDYSGS-LQNDANLAIEIALSE 208 (279) T ss_pred hhhcccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCceeEeeccccccc-cHHHHHHHHHHHHhh Confidence 455888899999999877 457778899999999999887778899999999999998766555 457788999999999 Q ss_pred hcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHH Q lcl|Aclame:pro 293 FGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTG 372 (432) Q Consensus 293 ~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~ 372 (432) +|||..+|-+ +..+.+..+|+..++.|++++.+..|.. ..+ .++.|-. +- T Consensus 209 ~GinekIL~G------sAtE~q~iAyy~rtVePILkQyek~liY----~~E----~fv~y~t----------------tt 258 (279) T protein:vir:40 209 YGMPRELLYG------QSNEVTIIAFAIQKVLPLLKQHDKNIIF----NQE----NFVAYIS----------------TT 258 (279) T ss_pred cCCchhhccc------cCchhhhhhHHHhhHHHHHHHhcccccc----hhh----hhhhhhe----------------ec Confidence 9999999844 5678899999999999999997765532 111 1111111 00 Q ss_pred HhCCCcCHHHHHHHhCCCCCCCcc Q lcl|Aclame:pro 373 IQGGFLKPNEARSKEDLPPEAGGD 396 (432) Q Consensus 373 ~~~g~~t~nE~R~~~gl~p~~~gd 396 (432) .+.|.+ |-.-.+..-+|+ |.| T Consensus 259 a~gg~~--~s~~~~~~~~~~-~~~ 279 (279) T protein:vir:40 259 AKGGAI--ESKSSKRDSEPV-GND 279 (279) T ss_pred ccCccc--ccccccccCCCC-CCC Confidence 112222 111122223333 222 No 190 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=98.41 E-value=7.7e-07 Score=54.09 Aligned_cols=388 Identities=9% Similarity=0.034 Sum_probs=179.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC----------c---ccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----------T---ISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~---~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) +-..+.|.++.......... -..+....-.... . .......=+.++....+++..+..+- T Consensus 43 ~~~~~~i~~~i~~~~~~~~r-------~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~ 115 (492) T protein:vir:97 43 ETLEEMIVRYIKQHLEKLPE-------ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIV 115 (492) T ss_pred hhHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHHHhhhhc Confidence 22222222221100000000 0000011000000 0 00000001124666778888888887 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) +-|+.+...+++. ...+...+ . |. .......+..+++.+|.+|..+..+.+|.+ .+..++|..+.++. T Consensus 116 g~p~~~~~~d~~~-----~~~l~~~~-~--n~---~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~i~ 183 (492) T protein:vir:97 116 GKPIAFKHTDDEV-----VKRIDEVL-G--NR---FDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIW 183 (492) T ss_pred ccCceeccCchHH-----HHHHHHHH-h--cc---HHHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEE Confidence 7787764322111 11222222 1 22 335556788999999999999998888865 46778999988887 Q ss_pred cCccce-eccceeEEEecccCceEEEccceEEEEecC---------------------CCC---------CcccccCHHH Q lcl|Aclame:pro 148 DDVGLL-NSKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTME 196 (432) Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------------~~~---------~~~~G~s~~~ 196 (432) ++.... ......+|..........+.+..+.++... ++. +...|.|-+. T Consensus 184 d~~~~~~~~~~vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e 263 (492) T protein:vir:97 184 TDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIF 263 (492) T ss_pred cCCCCCceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCCCCCCCchH Confidence 643211 111111221111111122233333332210 000 1235788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDA 276 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~ 276 (432) .+...++....+.-...+.+...+.|-.++.--.... ....+..+. ..+++.++++.+++.+.....+. T Consensus 264 ~v~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~ 332 (492) T protein:vir:97 264 MYKTLIDAYNRRLSDLSNTFKDSNELTYVLKNYDDQE---LPEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVE 332 (492) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCccc---chhHHHHHh--------hccceecCCCCcceeEeccCCHH Confidence 8877777777666666666666677766665322221 122222211 12244455555555554444455 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 345 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 345 (432) .+....+...+.|+..-++|..-.... ++.++.... ......+...+..+++.|...++ ...-. T Consensus 333 ~~~~~~~~L~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~-----~~~~~ 407 (492) T protein:vir:97 333 NSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFD-----IKGEH 407 (492) T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccc Confidence 567788888899999999886544221 111211111 11223333444444444443322 11112 Q ss_pred chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeee-----ccccccccccccccCCCC Q lcl|Aclame:pro 346 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLV-----NGNMLPIDMAGQAYLKGG 418 (432) Q Consensus 346 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~-----~~n~~~~~~~~~~~~~gg 418 (432) . .+.+.+..-...+..+.++++.++ .|+++..-+.+++++-+.+ ..+++.. ..+...... .....+ T Consensus 408 ~--~i~v~f~~~~p~~~~e~a~~~~kl--~G~iS~et~l~~l~~v~d~~~Eleri~~E~~~~~~~~~~~~~---~~~~~~ 480 (492) T protein:vir:97 408 K--DVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQTEYNKQLPNLDD---GGADSA 480 (492) T ss_pred c--eeeEEecCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhcccc---CCCCCC Confidence 2 334444666677888899988888 5889988888888764322 1221100 001111111 111111 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 419 DTNGEVSKEGNE 430 (432) Q Consensus 419 ~~~~~~~~~~~e 430 (432) ...+++.++.+| T Consensus 481 ~~~~~~~~~~~e 492 (492) T protein:vir:97 481 QQQERSNNKESE 492 (492) T ss_pred cccccccccccC Confidence 112222222222 No 191 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.39 E-value=8.9e-07 Score=53.74 Aligned_cols=364 Identities=11% Similarity=0.072 Sum_probs=158.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCc--CcccccHHHHh----c--cHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKGKNAL----K--VATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~~~~a~----~--~~~v~~~i~~ia~~ia~~~~~ 72 (432) |++ ++|...+..... ....+..+..... ...+++....+ + .....-+|+.++..+-=-.|. T Consensus 4 ~~i-~~L~~~~~~~~~----------r~~~~~~yy~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vd~~a~rl~~~Gf~ 72 (422) T protein:vir:97 4 MGM-GYLRRKLALFKT----------GVDKRYRYYAMDDRDDTRSIVMPNNVREMYRSVLEWTAKGVDSLADRIIFREFT 72 (422) T ss_pred HHH-HHHHHHHHHHHH----------HHHHHHHHHhcCCChhhcCccccHHHHHHHHhhcchhHHHHHHHHhccccceee Confidence 444 344333321110 0011111111111 11111111111 1 123344444444422212221 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC-CCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) . + +..++..+. + |.. ......+..+.+.+|.+|+.+..+. +|.+ .+.+++|..+....|... T Consensus 73 ---~-~-------d~~l~~~w~-~-N~l---d~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~ 135 (422) T protein:vir:97 73 ---N-D-------DFNAWEIFK-A-NNP---DIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTT 135 (422) T ss_pred ---C-C-------chhHHHHHH-h-cCh---HHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCC Confidence 1 1 112444443 2 332 3445577889999999999998864 4654 688899999998887532 Q ss_pred ceeccceeEEEecccCceE---EEccc---------------------eEEEEecCCCCCcccccCHH-HHHHHHHHHHH Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQR---VLKPE---------------------EILHFKNGITLDGLVGVPTM-EYLKSTLENSA 206 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~~---~~~~~---------------------~vih~~~~~~~~~~~G~s~~-~~~~~~~~~~~ 206 (432) .........+.....|... .++.. -|++|.+.......+|.|.+ +.+...++... T Consensus 136 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~ 215 (422) T protein:vir:97 136 FLLTEGYAILESDSNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAK 215 (422) T ss_pred CcceeeEEEEEecCCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHH Confidence 2111111111112222110 01111 26677655555667898865 33333333333 Q ss_pred HHHHHHHHHHhccCCcceEEEe-CCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeeecCCChhHHHHHH Q lcl|Aclame:pro 207 SADKFINNFYKQGLQVKGLVQY-VGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLE 280 (432) Q Consensus 207 ~~~~~~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~~~~e 280 (432) ...-......+-.+.|.-++.- +... ...+.++... ++++.++ .+.++.+++.+.-+ .+++ T Consensus 216 r~~~~~~~~~e~~a~pqr~i~G~d~d~--~~~~~~~~~~----------~~i~~~~~de~~~~~~v~q~~~~~l~-~~~~ 282 (422) T protein:vir:97 216 RTLERAEVTAEFYSFPQKYVLGMDPDA--KPMEKWRATV----------STLLEISKDEDGDKPTVGQFTTASMA-PFME 282 (422) T ss_pred HHHHHHHHHHHHhcchhhhhcccCccc--ccCchhhhhh----------hhhhccCCCCCCCcceeeecCCCChh-HHHH Confidence 2222222222222344333322 1111 1112222211 2333333 23567666554333 3789 Q ss_pred HHHHHHHHHHHHhcCChhhccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccchh--hcchhhh Q lcl|Aclame:pro 281 NTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK------LFLDSE--LDKGFYS 350 (432) Q Consensus 281 ~~~~~~~~I~~~~gvp~~~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~------ll~~~~--~~~~~~~ 350 (432) .++.....++..-++|+..+|..... +...+..+...+... +.--.+.+.+.+.+- +..... ......+ T Consensus 283 ~l~~~~~~~a~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~ 361 (422) T protein:vir:97 283 HLKMYASLFAGGSGLTLDDLGFPSDNPSSVESIKAAHENLRAA-GRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDT 361 (422) T ss_pred HHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccc Confidence 99999999999999999999875532 111222222222111 111122222222111 011000 0011122 Q ss_pred hhhhhhhhhhh---HHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCC Q lcl|Aclame:pro 351 KFNVDAILRAD---IKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKG 417 (432) Q Consensus 351 ~fd~~~l~~~d---~~~~~~~~~~~~~~--g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~g 417 (432) .+.+......+ ..+.++++.|++++ |+++.+-+++++|+...+..- . .. + +....| T Consensus 362 ~~~w~p~~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~~~~~~~~-~----~~---~---~~~~d~ 422 (422) T protein:vir:97 362 VIKWEPLFEADANMLTLVGDGAIKLNQAIPGFMDADVIRDLTGVKGADKPI-P----AI---T---EVTTDG 422 (422) T ss_pred eEEEccCCCCChHHHHHHHHHHHHHHhhccccccHHHHHHHcCCCchhHHH-H----HH---H---hhhccC Confidence 33333333344 45566777788887 788888999999995431100 0 00 0 000111 No 192 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.39 E-value=9e-07 Score=53.73 Aligned_cols=376 Identities=9% Similarity=-0.004 Sum_probs=165.6 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC--cc--ccc---HHHHhccHHHHHHHHHHHHhhccCceEE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TI--SVK---GKNALKVATVFACIKILSESVSKLPLKI 73 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~--~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 73 (432) .-++.+|...+.... . ....+....-+... .. ... ...-..+....-+|+..+..+--..|. T Consensus 6 ~~~i~~l~~~~~~~~---~-------r~~~l~~Yy~G~~~i~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~g~~- 74 (441) T protein:vir:80 6 LALIEGMYDRIQRLS---S-------WHCCIEGYYEGSNRVRDLGVAIPPELQRVQTVVSWPGIAVDALEERLDWLGWT- 74 (441) T ss_pred HHHHHHHHHHHHHHH---H-------HHHHHHHHHhcCCcchhcCcccchhhhhhhhhcchHHHHHHHHHhhhcccccc- Confidence 111222221111000 0 00000000000000 00 000 000011233444555555443211221 Q ss_pred EeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccce Q lcl|Aclame:pro 74 YQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLL 153 (432) Q Consensus 74 ~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~ 153 (432) .. + ...+..++. . | +.......++.+++.+|.+|+.+..+.+|.+ .+.+++|..+.++.+..... T Consensus 75 --~~-d------~~~l~~i~~-~-n---~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~ 139 (441) T protein:vir:80 75 --NG-D------GYGLDGVYA-A-N---RLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSR 139 (441) T ss_pred --CC-C------hHHHHHHHH-h-c---CHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCc Confidence 11 1 112333332 1 2 3567778889999999999999999888876 57888999988877643211 Q ss_pred ecc-ceeEEE--------------------ecccCceEE-------EccceEEEEecCCCCCcccccCHHHH-HHHHHHH Q lcl|Aclame:pro 154 NSK-TKMWYV--------------------VNTGGQQRV-------LKPEEILHFKNGITLDGLVGVPTMEY-LKSTLEN 204 (432) Q Consensus 154 ~~~-~~~~~~--------------------~~~~~~~~~-------~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~~~~ 204 (432) ... ...++. ....+.... +..--|+||.+.......+|.|-+.. +...++. T Consensus 140 ~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa 219 (441) T protein:vir:80 140 LDAGLVVQQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDE 219 (441) T ss_pred eeEEEEEEEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHH Confidence 110 011110 001111111 11123677776655566788886543 3344444 Q ss_pred HHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCC-----CceeeecCCChhHHHHH Q lcl|Aclame:pro 205 SASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----GYQFQPISLNMSDAQFL 279 (432) Q Consensus 205 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~-----g~~~~~~~~~~~d~~~~ 279 (432) .....-......+-.+.|..++.- ...++...+. +.. ..+++..+++ +.++.++..+..+ .++ T Consensus 220 ~~~~~s~~~~~~~~~~~~~~~i~G-~~~~~~~~~~----~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~ 287 (441) T protein:vir:80 220 AVRTLLGQSVNRDFYAYPQRWVTG-VSADEFSQPG----WVL------SMASVWAVDKDDDGDTPNVGSFPVNSPT-PYS 287 (441) T ss_pred HHHHHHHHHHHHHhhcCceeeeec-CCccccccch----hhh------cccccccCCCCCCCCcceeEecCccchH-HHH Confidence 444443333444445556555542 1222221111 111 1123333332 2455555543333 367 Q ss_pred HHHHHHHHHHHHHhcCChhhccCccccccccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccchhhcc Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQ-------------QQQFYTDTLQATLTMYEQEMTYKLFLDSELDK 346 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~-------------~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~ 346 (432) +.++.....|+..-++|+..++.....+ ++.+++ ....+...+.-+++.+...++...-.. .. T Consensus 288 ~~l~~~i~~~~~~~~~p~~~~g~~~~~~-~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~---~~ 363 (441) T protein:vir:80 288 DQMRLLAQLTAGEAAVPERYFGFITSNP-PSGEALAAEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEA---DF 363 (441) T ss_pred HHHHHHHHHHhcccCCCHHHhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc---cc Confidence 8888889999999999999887654321 111111 122222233333333322222111000 11 Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcC--HHHHHHHhCCCCCCCcceeeec--cccccccccccccCCCCCCCC Q lcl|Aclame:pro 347 GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLK--PNEARSKEDLPPEAGGDRLLVN--GNMLPIDMAGQAYLKGGDTNG 422 (432) Q Consensus 347 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t--~nE~R~~~gl~p~~~gd~~~~~--~n~~~~~~~~~~~~~gg~~~~ 422 (432) ...+++.+..-...+..+.++.+.+++.+|++. ..-+++.+|+.+.+- .+...- ....++.. ..+ T Consensus 364 ~~~i~~~f~~~~~~~~~e~ad~~~kl~~~g~~~~s~~~~~~~l~~~~~e~-~~~~~e~~e~~~~~~~----------~~~ 432 (441) T protein:vir:80 364 FGDVGLRWRDASTPTRAATADAVTKLVGAGILPADSRTVLEMLGLDDVQV-EAVMRHRAESSDPLAV----------LAG 432 (441) T ss_pred ceeeeEEeCCCCCcCHHHHHHHHHHHHhcCcccccHHHHHHhCCCCHHHH-HHHHHHHHHHHHHHHH----------Hhh Confidence 123445556667788899999999999999753 445788888765321 111000 00000000 000 Q ss_pred CCCCCCCCCC Q lcl|Aclame:pro 423 EVSKEGNEGN 432 (432) Q Consensus 423 ~~~~~~~e~~ 432 (432) ...++.| T Consensus 433 ---~~~~~~~ 439 (441) T protein:vir:80 433 ---AISRQTN 439 (441) T ss_pred ---hhhcccc Confidence 0001111 No 193 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=98.34 E-value=1.2e-06 Score=52.98 Aligned_cols=412 Identities=9% Similarity=0.032 Sum_probs=181.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcc-----ccc---HHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI-----SVK---GKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) |-..+.|.++...... ... ..-..+...+-...... ... ...=+..+...-.++..+..+-+-|+. T Consensus 39 ~~~~~~i~~~i~~~~~---~~~---~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~ 112 (511) T protein:vir:78 39 LQNVNEVSKYIEHHMD---YQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQ 112 (511) T ss_pred hcCHHHHHHHHHHHHH---hhh---HHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCce Confidence 2222333322110000 000 00000111110000000 000 000012355666778888877778877 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) +...+++ ....+..++. . | ....+...+...++.+|.+|.++.++.+|.+ .+..++|..+.++.+.... T Consensus 113 ~~~~d~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~ 181 (511) T protein:vir:78 113 YQDDDKD-----VLEAIEAFND-L-N---DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVE 181 (511) T ss_pred eecCchH-----HHHHHHHHHh-h-c---ChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCC Confidence 6432211 1122333332 1 2 3345667788999999999999998888865 5677889988888775432 Q ss_pred ee-ccceeEEEec-ccC-------ceEEEccceEEEEecCCC-------------------------CCcccccCHHHHH Q lcl|Aclame:pro 153 LN-SKTKMWYVVN-TGG-------QQRVLKPEEILHFKNGIT-------------------------LDGLVGVPTMEYL 198 (432) Q Consensus 153 ~~-~~~~~~~~~~-~~~-------~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~ 198 (432) .. .....+|... ..+ ....+.++.+.++..... .+...|.|-+..+ T Consensus 182 ~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v 261 (511) T protein:vir:78 182 RNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKV 261 (511) T ss_pred CceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhh Confidence 11 1111111111 110 011344554444432110 0123577878877 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc-cccceeecCCCceeeecCCChhHHH Q lcl|Aclame:pro 199 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ-NSHRIALMPVGYQFQPISLNMSDAQ 277 (432) Q Consensus 199 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d~~ 277 (432) ...++....+.--..+.+...+.|-.++.-....+.++.....+...-...... -.+.-.-..++.+++.++....... T Consensus 262 ~~liDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (511) T protein:vir:78 262 ITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQG 341 (511) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHH Confidence 777776665555555555555666666655444444443332211110000000 0000011223444444444434455 Q ss_pred HHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc Q lcl|Aclame:pro 278 FLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK 346 (432) Q Consensus 278 ~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~ 346 (432) +....+...+.|+..-++|....+.. ++.+...... .....+...+...++.|..-+...--.... .. T Consensus 342 ~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~-~~ 420 (511) T protein:vir:78 342 TEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDAN-KD 420 (511) T ss_pred HHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cc Confidence 56778888899999999987654332 2222111111 223344444555444444433321100000 00 Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCC----C Q lcl|Aclame:pro 347 GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGG----D 419 (432) Q Consensus 347 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~~~~~~~~~~~~gg----~ 419 (432) -..+++.+..-...+..+.++.+.++. |+++..-+.+++++-+.+ ..+++..-. ...+..........++ + T Consensus 421 ~~~i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~ 498 (511) T protein:vir:78 421 FNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDE 498 (511) T ss_pred cccceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCC Confidence 112444456666788888999988884 789888888887653321 111110000 0000000000011111 1 Q ss_pred CCCCCCCCCCCCC Q lcl|Aclame:pro 420 TNGEVSKEGNEGN 432 (432) Q Consensus 420 ~~~~~~~~~~e~~ 432 (432) .+++.++..+|.. T Consensus 499 ~~~~~~~~~~e~~ 511 (511) T protein:vir:78 499 QDDDTKDTVDKKE 511 (511) T ss_pred CCCCccCcccccC Confidence 1111112222222 No 194 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=98.34 E-value=1.2e-06 Score=52.98 Aligned_cols=412 Identities=9% Similarity=0.032 Sum_probs=181.2 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcc-----ccc---HHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI-----SVK---GKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) |-..+.|.++...... ... ..-..+...+-...... ... ...=+..+...-.++..+..+-+-|+. T Consensus 39 ~~~~~~i~~~i~~~~~---~~~---~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~ 112 (511) T protein:vir:96 39 LQNVNEVSKYIEHHMD---YQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQ 112 (511) T ss_pred hcCHHHHHHHHHHHHH---hhh---HHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCce Confidence 2222333322110000 000 00000111110000000 000 000012355666778888877778877 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) +...+++ ....+..++. . | ....+...+...++.+|.+|.++.++.+|.+ .+..++|..+.++.+.... T Consensus 113 ~~~~d~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~ 181 (511) T protein:vir:96 113 YQDDDKD-----VLEAIEAFND-L-N---DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVE 181 (511) T ss_pred eecCchH-----HHHHHHHHHh-h-c---ChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCC Confidence 6432211 1122333332 1 2 3345667788999999999999998888865 5677889988888775432 Q ss_pred ee-ccceeEEEec-ccC-------ceEEEccceEEEEecCCC-------------------------CCcccccCHHHHH Q lcl|Aclame:pro 153 LN-SKTKMWYVVN-TGG-------QQRVLKPEEILHFKNGIT-------------------------LDGLVGVPTMEYL 198 (432) Q Consensus 153 ~~-~~~~~~~~~~-~~~-------~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~ 198 (432) .. .....+|... ..+ ....+.++.+.++..... .+...|.|-+..+ T Consensus 182 ~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v 261 (511) T protein:vir:96 182 RNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKV 261 (511) T ss_pred CceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhh Confidence 11 1111111111 110 011344554444432110 0123577878877 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc-cccceeecCCCceeeecCCChhHHH Q lcl|Aclame:pro 199 KSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ-NSHRIALMPVGYQFQPISLNMSDAQ 277 (432) Q Consensus 199 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-n~g~~~vl~~g~~~~~~~~~~~d~~ 277 (432) ...++....+.--..+.+...+.|-.++.-....+.++.....+...-...... -.+.-.-..++.+++.++....... T Consensus 262 ~~liDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (511) T protein:vir:96 262 ITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQG 341 (511) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHH Confidence 777776665555555555555666666655444444443332211110000000 0000011223444444444434455 Q ss_pred HHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcc Q lcl|Aclame:pro 278 FLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDK 346 (432) Q Consensus 278 ~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~ 346 (432) +....+...+.|+..-++|....+.. ++.+...... .....+...+...++.|..-+...--.... .. T Consensus 342 ~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~-~~ 420 (511) T protein:vir:96 342 TEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDAN-KD 420 (511) T ss_pred HHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cc Confidence 56778888899999999987654332 2222111111 223344444555444444433321100000 00 Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccccccccccccCCCC----C Q lcl|Aclame:pro 347 GFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NMLPIDMAGQAYLKGG----D 419 (432) Q Consensus 347 ~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~~~~~~~~~~~~gg----~ 419 (432) -..+++.+..-...+..+.++.+.++. |+++..-+.+++++-+.+ ..+++..-. ...+..........++ + T Consensus 421 ~~~i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~ 498 (511) T protein:vir:96 421 FNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDE 498 (511) T ss_pred cccceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCC Confidence 112444456666788888999988884 789888888887653321 111110000 0000000000011111 1 Q ss_pred CCCCCCCCCCCCC Q lcl|Aclame:pro 420 TNGEVSKEGNEGN 432 (432) Q Consensus 420 ~~~~~~~~~~e~~ 432 (432) .+++.++..+|.. T Consensus 499 ~~~~~~~~~~e~~ 511 (511) T protein:vir:96 499 QDDDTKDTVDKKE 511 (511) T ss_pred CCCCccCcccccC Confidence 1111112222222 No 195 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=98.33 E-value=1.3e-06 Score=52.83 Aligned_cols=393 Identities=13% Similarity=0.041 Sum_probs=175.3 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-------cCCcC-cccccHHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-------GISPS-TISVKGKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~-~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) ..++..+...+.... .. ...+..+. ..... ....+.+ +..+.....|+..+..+-+-|+. T Consensus 19 ~~~l~~~i~~~~~~~---~r-------~~~~~~yy~g~~~i~~~~~~~~~~~~~k--i~~n~~~~ivd~~~~~l~g~~~~ 86 (453) T protein:vir:39 19 NEVVTKFMEKHRLEV---AR-------YEYLKNMYRGIMAIDAEPTKDLWKPDNR--LTVNFTKYIVDTFTGYFNGIPVK 86 (453) T ss_pred HHHHHHHHHHHHHHH---HH-------HHHHHHHhhccCchhcCCCccccCccce--eecchHHHHHHHHhhhhcccCce Confidence 111222211110000 00 00000111 01000 0000111 12456677788888887777777 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) +...+++ ....+..++.. | ........++.+.+.+|.+|+.+..+.+|.+ .+..++|..+.++.++... T Consensus 87 ~~~~d~~-----~~~~l~~i~~~--N---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~~ 155 (453) T protein:vir:39 87 KSHSDKE-----TLSKLQEFDNL--N---DMEDEESELAKMACIYGRAFELLYQNEETQT-NVIYNTPENMFMVYDDTIK 155 (453) T ss_pred eccCChH-----HHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEecCCCC Confidence 6432221 11233344432 2 3345677889999999999999999888865 4566788888888765322 Q ss_pred eeccceeEEEecccCc--eEEEccceEEEEecC-----------CC---------CCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQ--QRVLKPEEILHFKNG-----------IT---------LDGLVGVPTMEYLKSTLENSASADK 210 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~--~~~~~~~~vih~~~~-----------~~---------~~~~~G~s~~~~~~~~~~~~~~~~~ 210 (432) ........+....+.. ...+.++.+.++... ++ .+...|.|-+..+...++....+.- T Consensus 156 ~~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~~~~s 235 (453) T protein:vir:39 156 QEPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYFNEERMSIFESVISLVNAFNKAIS 235 (453) T ss_pred CeEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecCCCCCCcchhhhHHHHHHHHHHHH Confidence 1111111111111111 011222222222210 00 0123677878777777766665555 Q ss_pred HHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 211 FINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIA 290 (432) Q Consensus 211 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~ 290 (432) ...+.++..+.|..++.- ...+++....++....-...+ ....+.+.++..+........+....+...+.|+ T Consensus 236 ~~~~~~~~~~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~I~ 308 (453) T protein:vir:39 236 EKANDVDYFSDQYLTFLG-AAVEEEDLKNIRSNRVINYYG------ESSEAKNVDVKFLEKPDSDSQTENLLDRLTKLIF 308 (453) T ss_pred HHHHHHHHhhCceeeeec-CCCCchhhhhhhhcceeeecC------CCCCCCCCceeEEeecCCHHHHHHHHHHHHHHHH Confidence 555555666667666553 233444443332211000000 0111223333333333344555677888888888 Q ss_pred HHhcCChhhccCccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhh Q lcl|Aclame:pro 291 TAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRA 360 (432) Q Consensus 291 ~~~gvp~~~l~~~~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~ 360 (432) ..-++|..-....++.++..... .....+...+..+++.+..-++.. ....-.. .+.+.+..-... T Consensus 309 ~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~~~--~i~v~f~~~~p~ 384 (453) T protein:vir:39 309 QTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNV--SNKEAWK--DIEYTFTRNEPK 384 (453) T ss_pred HHhCCcccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCccccc--cceEEeCCCCCc Confidence 88888754332222222211111 223344445555555554433211 1111112 234444666778 Q ss_pred hHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 361 DIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 361 d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) |..+.++++.++ .|+++..-+.+++++-+.+ ..++. .+.-............+++..++...+.++- T Consensus 385 ~~~~~a~~~~kl--~g~is~et~l~~l~~v~D~~~E~~ri--~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~e 453 (453) T protein:vir:39 385 DIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKI--KKEEASTAIFDKDKQPSEKGTDTVVPETNEE 453 (453) T ss_pred CHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHH--HHHHHHHHHHHHhccCCCCCCCCCCCCcCCC Confidence 888899988887 6789998899988764332 11111 1110000000001111111111111111111 No 196 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=98.32 E-value=1.4e-06 Score=52.75 Aligned_cols=387 Identities=10% Similarity=0.021 Sum_probs=174.1 Q ss_pred Cch----------HHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MKI----------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLP 70 (432) Q Consensus 1 Mg~----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~ 70 (432) ..+ +..+.........-...... ...-+......+ ..-+.++....+++..++.+-+-| T Consensus 33 ~~~i~~~~~~~~~~~~~~~Yy~g~~~i~~r~~~--------~~~~~~~~~~~~---~~ki~~n~~~~Ivd~~~~~l~g~p 101 (474) T protein:vir:95 33 IRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKK--------VDVYGNIDYDKP---DWRITTNFHQNLVDQKVSYVASKP 101 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCchhccccc--------cccccccccccc---cceeccchHHHHHHHHHhhhccCC Confidence 111 01111111100000000000 000000000000 001124556667888888887888 Q ss_pred eEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCc Q lcl|Aclame:pro 71 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 150 (432) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~ 150 (432) +.+...+++ ....+...+ . | ........++...+.+|.+|+.+..+.+|.+ .+..++|..+-++.+.. T Consensus 102 ~~~~~~d~~-----~~~~l~~~~-~--n---~~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~ 169 (474) T protein:vir:95 102 VTYSCEDES-----VLKIIHDVL-D--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDK 169 (474) T ss_pred ceeccCchH-----HHHHHHHHH-h--c---cHHHHHHHHHHHHhhcCcEEEEEEecCCCce-EEEEEcccceEEEEcCC Confidence 776432211 111222222 1 2 2445566788999999999999988888865 46778888888777653 Q ss_pred cce-eccceeEEEecccCceEEEccceEEEEecCC---------------------C---------CCcccccCHHHHHH Q lcl|Aclame:pro 151 GLL-NSKTKMWYVVNTGGQQRVLKPEEILHFKNGI---------------------T---------LDGLVGVPTMEYLK 199 (432) Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s~~~~~~ 199 (432) ... ......+|..........+..+.+.+++... + .+...|.|-+..+. T Consensus 170 ~~~~~~~~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn~~g~sd~e~v~ 249 (474) T protein:vir:95 170 EREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFKNNPEEVSDIWMYK 249 (474) T ss_pred CCCceEEEEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeecCCCCCCCcHHHHH Confidence 211 1111222222222222233344443332100 0 11245788788777 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHH Q lcl|Aclame:pro 200 STLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFL 279 (432) Q Consensus 200 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~ 279 (432) ..++....+.-...+.++..+.|-.++.--.....+. ..... ...+++.++++-+++.+..+.....+. T Consensus 250 ~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~~~---~~~~~--------~~~~~i~~~~~~~~~~l~~~~~~~~~~ 318 (474) T protein:vir:95 250 SLIDAIDKRLSDAQNMFDESVELIYILKGYEGQDLEE---FMRGL--------KYYKAINVDGDGGVETIQVEVPVSSTK 318 (474) T ss_pred HHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccchh---hhhhh--------hccceeeccCCCceeEEeecCCHHHHH Confidence 7777766655555555666666765554322212111 11111 124456666666666555555556677 Q ss_pred HHHHHHHHHHHHHhcCChhhcc-CccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchh Q lcl|Aclame:pro 280 ENTELTIRQIATAFGIKMHQLN-DLSKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGF 348 (432) Q Consensus 280 e~~~~~~~~I~~~~gvp~~~l~-~~~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~ 348 (432) ...+...+.|+..-++|..... ..++.++.... +.....+...+..+++.|.+.+. ...-...+ T Consensus 319 ~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g-----~~~d~~~i 393 (474) T protein:vir:95 319 EYIDLMRAYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNN-----LKMDVKDI 393 (474) T ss_pred HHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCccccee Confidence 8888999999999999864322 11111211111 12233444445555554443322 11112233 Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCC Q lcl|Aclame:pro 349 YSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSK 426 (432) Q Consensus 349 ~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~ 426 (432) .+.| +.-...|..+.++. +.++|+++...+.+++++-+.+ ..+++..-.. ............+.+..++.+. T Consensus 394 ~v~f--~~~~p~d~~e~a~~---~~~~g~iS~et~i~~l~~v~d~~~E~~ri~~E~~-~~~~~~~~~~~~~~d~~~~~~~ 467 (474) T protein:vir:95 394 EISF--NFNRMMNDAEQSQI---IAQSQYLSRETLVKSSPLVDDYKAELERIEQEQM-EYNKQLPNLDDGGADGAQQQER 467 (474) T ss_pred eEEe--ccCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHHHHHHH-HHHhcccccccccCCCCcCCCC Confidence 4444 33345555555554 5567999998898888764322 1111100000 0000000011111111111111 Q ss_pred CCCCCC Q lcl|Aclame:pro 427 EGNEGN 432 (432) Q Consensus 427 ~~~e~~ 432 (432) ++++.. T Consensus 468 ~~~~~~ 473 (474) T protein:vir:95 468 SNDKES 473 (474) T ss_pred CccCCC Confidence 111111 No 197 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=98.30 E-value=1.5e-06 Score=52.50 Aligned_cols=371 Identities=12% Similarity=0.078 Sum_probs=172.8 Q ss_pred Cc------hH----------HHHHHhccccccccccccccCCchHHHHHhhcCCc-CcccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MK------IV----------DSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-STISVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg------~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~v~~~~a~~~~~v~~~i~~ia 63 (432) |- +. .++++...... ..+.... .....+ .-+.++....+++..+ T Consensus 1 l~~~~l~~~i~~~~~~~~r~~~l~~yy~g~~-----------------~il~~~~~~~~~~~--~ki~~n~~~~ivd~~~ 61 (429) T protein:vir:98 1 MTKDLLSELIQKHRSFNLSYSAYKQLYEGDH-----------------AILQQKQKEQYKPD--NRLVVNFAKYIVDTFN 61 (429) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----------------ccccccccccCCCc--ceeecchHHHHHHHHh Confidence 11 11 11111111100 0000000 000000 1123566777888888 Q ss_pred HhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcce Q lcl|Aclame:pro 64 ESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKV 143 (432) Q Consensus 64 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v 143 (432) ..+-+-|+.+...++. ....+..++. . | ........++.+++.+|.+|+.+..+.+|.+ .+..++|..+ T Consensus 62 ~~l~g~~~~~~~~~~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~~~~~~p~~~ 130 (429) T protein:vir:98 62 GYFIGVPVQTSHENKQ-----VSNYLELLDG-Y-N---DQDDNNAELSKICSIYGHGYELVFNDENAEA-GITYLTPLEA 130 (429) T ss_pred hhhcccCceeecCChH-----HHHHHHHHHh-h-c---CHhHHHHHHHHHHhhcCeEEEEEEecCCCcE-EEEEEcccce Confidence 8887888776432211 1112333332 2 2 2345677888999999999999999888875 4677888888 Q ss_pred EEEEcCccceeccceeEEEecccCceE-E-Eccc-------------------------eEEEEecCCCCCcccccCHHH Q lcl|Aclame:pro 144 TVYIDDVGLLNSKTKMWYVVNTGGQQR-V-LKPE-------------------------EILHFKNGITLDGLVGVPTME 196 (432) Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-------------------------~vih~~~~~~~~~~~G~s~~~ 196 (432) .++.++...........+....++... . +..+ -|+++++ ...|.|-+. T Consensus 131 ~~v~dd~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e 205 (429) T protein:vir:98 131 FIVYDDSIRQKPLFAVRYFYNKGGVLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYVE-----NEERQSLLA 205 (429) T ss_pred EEEEeCCCCCceEEEEEEEEecCceEEEEEEeCceEEEEEecCCceEecccccccCCccceEEecC-----CCCCCCcHH Confidence 877765321111111111111111100 0 1111 1344432 236888888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC----CCceeeecCCC Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP----VGYQFQPISLN 272 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~----~g~~~~~~~~~ 272 (432) .+...++....+.-......+..+.|-.+++-. ..+++....++. .+++.++ .+.++..+..+ T Consensus 206 ~v~~liD~~d~~~s~~~~~~~~~~~p~~~i~g~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~ 272 (429) T protein:vir:98 206 SVVTLINAFNKAISEKANDVEYFADAYLKILGA-ELDDETLKSLRD------------TRIINLKDTDAQQLTVEFLQKP 272 (429) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCceeeeecC-CCCcchhhhHhh------------CceeeccCCCCCCcceeEEeec Confidence 777777777666666666666777777666532 223332222111 1223332 12234444333 Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccch Q lcl|Aclame:pro 273 MSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDS 342 (432) Q Consensus 273 ~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~ 342 (432) .....+....+...+.|+..-++|..-....++.+...... .....+...+..+++.+..-++... .. T Consensus 273 ~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~--~~ 350 (429) T protein:vir:98 273 DADATQEHLLDRLENLIFRTAMVANISDESFGTASGIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKI--GP 350 (429) T ss_pred CCHHHHHHHHHHHHHHHHHHhCccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--Cc Confidence 33444556778889999999999864433222222111111 1122333334444444433322111 11 Q ss_pred hhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCC Q lcl|Aclame:pro 343 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNG 422 (432) Q Consensus 343 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~ 422 (432) .-.. .+.+.+..-+..|..+.++.+.++ +|+++..-+.++++.-+.+..+.=.+-..-.. . .....+..++ T Consensus 351 ~d~~--~i~v~f~~~~p~~~~~~a~~~~kl--~g~is~et~~~~l~~v~d~~~E~~ri~~E~~~--~---~~~~~~~~~~ 421 (429) T protein:vir:98 351 KDWI--GIKYKFTRNLPANLLEESQIAGNL--AGIVSEETQVGVLSIVENPQKEIERKNSDKST--L---ISRQAGGLNG 421 (429) T ss_pred cccc--cceEEeCCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHH--H---HHHHHhhhcC Confidence 1112 244445666778888999988887 68899877888887644321110000000000 0 0011111111 Q ss_pred CCCCCCCCC Q lcl|Aclame:pro 423 EVSKEGNEG 431 (432) Q Consensus 423 ~~~~~~~e~ 431 (432) +.+. ++.+ T Consensus 422 ~~~~-~~~~ 429 (429) T protein:vir:98 422 QNTT-TILE 429 (429) T ss_pred CCCC-CCCC Confidence 1111 1111 No 198 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=98.29 E-value=1.7e-06 Score=52.26 Aligned_cols=352 Identities=10% Similarity=0.090 Sum_probs=157.4 Q ss_pred CchHH-HHHHhccccccccccccccCCchHHHHHhhcCCc--CcccccHHHH------hccHHHHHHHHHHHHhhccCce Q lcl|Aclame:pro 1 MKIVD-SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--STISVKGKNA------LKVATVFACIKILSESVSKLPL 71 (432) Q Consensus 1 Mg~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~v~~~~a------~~~~~v~~~i~~ia~~ia~~~~ 71 (432) |..+. |+. ....+..... ...+++.... +......-+|+.++..+-=-.| T Consensus 1 l~~~~~r~~---------------------~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vds~a~rl~~~Gf 59 (410) T protein:vir:95 1 MNLYQSRVN---------------------LRYKHYAMQHYEAPTGITIPAHIRAKYQAVLGWAAKGVDSLADRLIFRAF 59 (410) T ss_pred CCcchhhHH---------------------HHHHHhcCCCCccccchhccHHHHhHHHhhcchhHHHHHHhHhhhccccc Confidence 22221 000 0011111111 0011110000 1123344455555543222222 Q ss_pred EEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCcc Q lcl|Aclame:pro 72 KIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVG 151 (432) Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~ 151 (432) . .. +..+...+. + |. .......+..+.+++|.+|+.+..+.+|.+ .+.+++|..+..+.|... T Consensus 60 ~---~~--------d~~l~~i~~-~-N~---ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~ 122 (410) T protein:vir:95 60 A---ND--------DFNVTEIFD-R-NN---PDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPIT 122 (410) T ss_pred c---CC--------CchHHHHHh-h-cC---hHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCC Confidence 1 11 112344332 2 32 234566788999999999999988888864 678899999988887532 Q ss_pred ceeccceeEEEecccCce---EEEccc---------------------eEEEEecCCCCCcccccCHH----HHHHHHHH Q lcl|Aclame:pro 152 LLNSKTKMWYVVNTGGQQ---RVLKPE---------------------EILHFKNGITLDGLVGVPTM----EYLKSTLE 203 (432) Q Consensus 152 ~~~~~~~~~~~~~~~~~~---~~~~~~---------------------~vih~~~~~~~~~~~G~s~~----~~~~~~~~ 203 (432) .........+....++.. ..+.++ -|++|.+....+..+|.|-| ..+...+. T Consensus 123 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~ 202 (410) T protein:vir:95 123 GLLVEGYAVLARDDYNRPTLEAYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAK 202 (410) T ss_pred CceEEEEEEEEecCCCeEEEEEEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHH Confidence 111111111111111111 112122 25666655444566888843 33333333 Q ss_pred HHHHHHHHHHHHHhccCCcceEEEe-CCCCCHHHHHHHHHHHHHHhcccccccceeecCC-----CceeeecCCChhHHH Q lcl|Aclame:pro 204 NSASADKFINNFYKQGLQVKGLVQY-VGDLNEDAKKVFRENFESMSSGLQNSHRIALMPV-----GYQFQPISLNMSDAQ 277 (432) Q Consensus 204 ~~~~~~~~~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~-----g~~~~~~~~~~~d~~ 277 (432) ....-......++ +.|.-++.- +.+. +..+. |+.. .++++.++. +.++.+++...-+ . T Consensus 203 r~~~~~~~~~e~~---a~pqr~i~G~d~d~--~~~~~----~~~~------~~~i~~~~~~~~~~~~~v~q~~~~~l~-~ 266 (410) T protein:vir:95 203 RTLERADITAEFY---SWPQKYILGLDPDA--EPMEK----WKAT------VSSLLTISSSDKGVKPSVGQFTTASMS-P 266 (410) T ss_pred HHHHHHHHHHHHh---cchhheeeccCCCC--CcCch----hhhh------hhhheeccCCCCCCcceEEecCCCChH-H Confidence 3333333333443 444444432 2211 11122 2221 123444432 3567666543333 4 Q ss_pred HHHHHHHHHHHHHHHhcCChhhccCcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHh----h--ccchh--hcch Q lcl|Aclame:pro 278 FLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQQQQQFYTDTLQATLTMYEQEMTYK----L--FLDSE--LDKG 347 (432) Q Consensus 278 ~~e~~~~~~~~I~~~~gvp~~~l~~~~~~--~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~----l--l~~~~--~~~~ 347 (432) +++.++.....||..-++|+..+|..... +...+......+... +.-..+.+.+.+.+- + ..... .... T Consensus 267 ~~~~l~~l~~~~a~~s~lP~~~lg~~~~NpsSa~Al~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~ 345 (410) T protein:vir:95 267 FTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQF 345 (410) T ss_pred HHHHHHHHHHHHhhhcCCCHHHhccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc Confidence 78999999999999999999999865432 111122222111111 111122222222111 0 01000 0111 Q ss_pred hhhhhhhh---hhhhhhHHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCC Q lcl|Aclame:pro 348 FYSKFNVD---AILRADIKTRYEAYRTGIQG--GFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGD 419 (432) Q Consensus 348 ~~~~fd~~---~l~~~d~~~~~~~~~~~~~~--g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~ 419 (432) ..+++.+. +....+..+.++++.|++++ |+.+..-+++.+|+.+.+-.. . . .+ .... .|+ T Consensus 346 ~~~~v~W~p~~d~~~~s~a~~aDa~~Kl~~a~~g~~~~~~~~~~lg~~~~~~~~-~---~----~~---e~~~-~g~ 410 (410) T protein:vir:95 346 VRTAVKWEPLFEADANTMTMIGDGVVKLNQALPGYINAETIRDLTGIAGDMSAK-P---V----VS---EGGS-NGE 410 (410) T ss_pred ceeeEEeeecCCcchhhHHHHHHHHHHHHHhccCCccHHHHHHhcCCChHHHHH-H---H----HH---HHHh-CCC Confidence 12232233 22334567788888899887 777777899999997642110 0 0 00 0001 111 No 199 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=98.29 E-value=1.7e-06 Score=52.26 Aligned_cols=388 Identities=9% Similarity=0.048 Sum_probs=181.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC-------------cccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS-------------TISVKGKNALKVATVFACIKILSESVS 67 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------------~~~v~~~~a~~~~~v~~~i~~ia~~ia 67 (432) +-+.+.|.++.......... -..+....-.... ........=+..+....+++..+..+- T Consensus 34 e~~~~~i~~~i~~~~~~~~r-------~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~ 106 (483) T protein:vir:12 34 ETLEEMIVRYIKQHLEKLPE-------ISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIV 106 (483) T ss_pred hhHHHHHHHHHHHHHHHHHH-------HHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHhhhhc Confidence 33333333332110000000 0000111000000 000000001224666777888888887 Q ss_pred cCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEE Q lcl|Aclame:pro 68 KLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYI 147 (432) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~ 147 (432) .-|+.+...+++. ...+...+ . | ........+..+++.+|.+|+.+..+.+|.+ .+..++|..+.++. T Consensus 107 G~p~~~~~~d~~~-----~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~-~i~~~~p~~~~~v~ 174 (483) T protein:vir:12 107 GKPIAFKHTDDEV-----VKRIDEVL-G--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIW 174 (483) T ss_pred ccCceeccCChHH-----HHHHHHHH-h--c---cHHHHHHHHHHHHhhCCeEEEEEEEcCCCce-EEEEEcccceEEEE Confidence 7787764322211 11122222 1 2 2234556678899999999999998888875 47788999988887 Q ss_pred cCccce-eccceeEEEecccCceEEEccceEEEEecC---------------------CCC---------CcccccCHHH Q lcl|Aclame:pro 148 DDVGLL-NSKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------------ITL---------DGLVGVPTME 196 (432) Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------------~~~---------~~~~G~s~~~ 196 (432) +..... ......+|..........+.+..+.|+... ++. +...|.|-+. T Consensus 175 d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e 254 (483) T protein:vir:12 175 TDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIF 254 (483) T ss_pred cCCCCCceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchh Confidence 643211 111111222112122222333333332100 000 1235788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDA 276 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~ 276 (432) .+...++....+.-...+.++..+.|..++..-..... ......+. ..+++.++++.+++.+.....+. T Consensus 255 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~ 323 (483) T protein:vir:12 255 MYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDDQEL---PEFKRLLR--------YYGAIKVSDNGGVDTIQVEVPVE 323 (483) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccc---hhHHHhhh--------hccccccCCCCcceEEeecCCHH Confidence 77777777666655555666666777666653222221 11222111 12234444444554444444455 Q ss_pred HHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhc Q lcl|Aclame:pro 277 QFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELD 345 (432) Q Consensus 277 ~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~ 345 (432) .+....+...+.|+..-++|....... ++.++.... ......+...+..+++.|...+.. .... T Consensus 324 ~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~-----~~~~ 398 (483) T protein:vir:12 324 NSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KGEH 398 (483) T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCcc Confidence 567778888889999999987544321 111211111 122334444455555544443321 1112 Q ss_pred chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeee-----ccccccccccccccCCCC Q lcl|Aclame:pro 346 KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLV-----NGNMLPIDMAGQAYLKGG 418 (432) Q Consensus 346 ~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~-----~~n~~~~~~~~~~~~~gg 418 (432) . .+.+.+..-...|..+.++.+.++ .|+++..-+++++++-+.+ ..++... ..........+ ..+. T Consensus 399 ~--~i~v~f~~~~p~~~~~~a~~~~kl--~GiiS~et~~~~~~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~---~d~~ 471 (483) T protein:vir:12 399 K--DVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGG---ADGA 471 (483) T ss_pred c--eeeEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhcccccccc---cCCc Confidence 2 334444666778899999998888 5899998899988764321 1111100 00010111000 0001 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 419 DTNGEVSKEGNE 430 (432) Q Consensus 419 ~~~~~~~~~~~e 430 (432) ..++++.++..| T Consensus 472 ~~~~~~~~~e~e 483 (483) T protein:vir:12 472 QQQERSNNKESE 483 (483) T ss_pred ccCCCCCcccCC Confidence 111122222222 No 200 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=98.28 E-value=1.8e-06 Score=52.12 Aligned_cols=386 Identities=11% Similarity=0.045 Sum_probs=173.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh----------------cCCcCcccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL----------------GISPSTISVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------g~~~~~~~v~~~~a~~~~~v~~~i~~ia~ 64 (432) .-..+.|.++........ ..-..+..+. +......+ ..=+..+.....++..+. T Consensus 26 ~~~~~~i~~~i~~~~~~~-------~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~---~~ki~~n~~k~Iv~~~~~ 95 (474) T protein:vir:96 26 ETQEEMIIRLINNHKQKL-------KDINVGQKYYDKDNDINYQAYKQDLHGNIDYTKP---DWRITTNFHQNLVDQKVS 95 (474) T ss_pred cchHHHHHHHHHHHHHHH-------HHHHHHHHHhcccCccccccchhhhccccccccc---ccccccchHHHHHHhhhh Confidence 111111111110000000 0000000000 00000000 000124556677888888 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 144 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~ 144 (432) .+-+-|+.+...+++ ....+...+. | ........++.+++.+|.+|..+.++.+|.+ .+..++|..+- T Consensus 96 yl~g~p~~~~~~~~~-----~~~~l~~~~~---n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~ 163 (474) T protein:vir:96 96 YVAGKPVTYAHDDDK-----VLDVIHQVLD---T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAI 163 (474) T ss_pred hhcccCceeccCChH-----HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceE Confidence 888888886432221 1122222221 2 3455667788999999999999988888865 56678888888 Q ss_pred EEEcCccceec-cceeEEEecccCceEEEccceEEEEecCC---------------------C---------CCcccccC Q lcl|Aclame:pro 145 VYIDDVGLLNS-KTKMWYVVNTGGQQRVLKPEEILHFKNGI---------------------T---------LDGLVGVP 193 (432) Q Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s 193 (432) ++.++...... ....+|..........+.++.+.++.... . .+...|.| T Consensus 164 ~v~d~~~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~ 243 (474) T protein:vir:96 164 PIWTDKEREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVS 243 (474) T ss_pred EEEcCCCCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCC Confidence 88764321111 11111111111112223344444332110 0 02245778 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCCh Q lcl|Aclame:pro 194 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNM 273 (432) Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~ 273 (432) -+......++....+.-...+.+...+.|-.++.--.. +........+. ..+++.++++.+++.+.... T Consensus 244 d~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~ 312 (474) T protein:vir:96 244 DIWMYKSFVDAIDKRLSDVQNMFDESVELIYILRGYEG---EDLSEFMEGLK--------YYKAINVSSDGGVETIQVEV 312 (474) T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcCCCc---ccccchhhhhh--------ccceeeccCCCceeEEeccC Confidence 77777777777665555555555566666555443211 11111222111 23455566665555555444 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccch Q lcl|Aclame:pro 274 SDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDS 342 (432) Q Consensus 274 ~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~ 342 (432) .+..+....+...+.|+..-++|....... +..++.... ......+...+..+++.|...+. .. T Consensus 313 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g-----~~ 387 (474) T protein:vir:96 313 PVASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNK-----IK 387 (474) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CC Confidence 555667788888899999999986543221 111111111 11223333444444444433221 11 Q ss_pred hhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCC Q lcl|Aclame:pro 343 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 343 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~ 420 (432) .-.. .+.+.+..-...+..+.++.+ .++|+++...+++++++-..+ ..+++-.-.. .... ......++.. T Consensus 388 ~d~~--~i~i~f~~~~p~~~~e~a~~~---~~~giiS~et~~~~lp~v~D~~~E~eri~~E~~-~~~~--~~~~~~~~~~ 459 (474) T protein:vir:96 388 LDAK--EIEITFNFNVMVNDLEQSQIG---AQSQYLSKETLVRHHPWVDDPKAELERLDEEQL-ELNK--QLPNLDDGGA 459 (474) T ss_pred cccc--eeeEEecCCCccCHHHHHHHH---HHcCCCChHHHHHhCCCCCCHHHHHHHHHHHHH-HHHh--hccccccccC Confidence 1122 233434455556666666654 457999999999998764332 1221100000 0000 0011111222 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 421 NGEVSKEGNEGN 432 (432) Q Consensus 421 ~~~~~~~~~e~~ 432 (432) ++..+..+.+++ T Consensus 460 ~~~~~~~~~~~~ 471 (474) T protein:vir:96 460 DGAQQQQQSENN 471 (474) T ss_pred CCCCCcCCCCcc Confidence 222222222222 No 201 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=98.28 E-value=1.8e-06 Score=52.12 Aligned_cols=386 Identities=11% Similarity=0.045 Sum_probs=173.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh----------------cCCcCcccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL----------------GISPSTISVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------g~~~~~~~v~~~~a~~~~~v~~~i~~ia~ 64 (432) .-..+.|.++........ ..-..+..+. +......+ ..=+..+.....++..+. T Consensus 26 ~~~~~~i~~~i~~~~~~~-------~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~---~~ki~~n~~k~Iv~~~~~ 95 (474) T protein:vir:95 26 ETQEEMIIRLINNHKQKL-------KDINVGQKYYDKDNDINYQAYKQDLHGNIDYTKP---DWRITTNFHQNLVDQKVS 95 (474) T ss_pred cchHHHHHHHHHHHHHHH-------HHHHHHHHHhcccCccccccchhhhccccccccc---ccccccchHHHHHHhhhh Confidence 111111111110000000 0000000000 00000000 000124556677888888 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVT 144 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~ 144 (432) .+-+-|+.+...+++ ....+...+. | ........++.+++.+|.+|..+.++.+|.+ .+..++|..+- T Consensus 96 yl~g~p~~~~~~~~~-----~~~~l~~~~~---n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~ 163 (474) T protein:vir:95 96 YVAGKPVTYAHDDDK-----VLDVIHQVLD---T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAI 163 (474) T ss_pred hhcccCceeccCChH-----HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceE Confidence 888888886432221 1122222221 2 3455667788999999999999988888865 56678888888 Q ss_pred EEEcCccceec-cceeEEEecccCceEEEccceEEEEecCC---------------------C---------CCcccccC Q lcl|Aclame:pro 145 VYIDDVGLLNS-KTKMWYVVNTGGQQRVLKPEEILHFKNGI---------------------T---------LDGLVGVP 193 (432) Q Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s 193 (432) ++.++...... ....+|..........+.++.+.++.... . .+...|.| T Consensus 164 ~v~d~~~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~ 243 (474) T protein:vir:95 164 PIWTDKEREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVS 243 (474) T ss_pred EEEcCCCCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCC Confidence 88764321111 11111111111112223344444332110 0 02245778 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCCh Q lcl|Aclame:pro 194 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNM 273 (432) Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~ 273 (432) -+......++....+.-...+.+...+.|-.++.--.. +........+. ..+++.++++.+++.+.... T Consensus 244 d~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~ 312 (474) T protein:vir:95 244 DIWMYKSFVDAIDKRLSDVQNMFDESVELIYILRGYEG---EDLSEFMEGLK--------YYKAINVSSDGGVETIQVEV 312 (474) T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcCCCc---ccccchhhhhh--------ccceeeccCCCceeEEeccC Confidence 77777777777665555555555566666555443211 11111222111 23455566665555555444 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccch Q lcl|Aclame:pro 274 SDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTYKLFLDS 342 (432) Q Consensus 274 ~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~ 342 (432) .+..+....+...+.|+..-++|....... +..++.... ......+...+..+++.|...+. .. T Consensus 313 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g-----~~ 387 (474) T protein:vir:95 313 PVASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNK-----IK 387 (474) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CC Confidence 555667788888899999999986543221 111111111 11223333444444444433221 11 Q ss_pred hhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCC Q lcl|Aclame:pro 343 ELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDT 420 (432) Q Consensus 343 ~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~ 420 (432) .-.. .+.+.+..-...+..+.++.+ .++|+++...+++++++-..+ ..+++-.-.. .... ......++.. T Consensus 388 ~d~~--~i~i~f~~~~p~~~~e~a~~~---~~~giiS~et~~~~lp~v~D~~~E~eri~~E~~-~~~~--~~~~~~~~~~ 459 (474) T protein:vir:95 388 LDAK--EIEITFNFNVMVNDLEQSQIG---AQSQYLSKETLVRHHPWVDDPKAELERLDEEQL-ELNK--QLPNLDDGGA 459 (474) T ss_pred cccc--eeeEEecCCCccCHHHHHHHH---HHcCCCChHHHHHhCCCCCCHHHHHHHHHHHHH-HHHh--hccccccccC Confidence 1122 233434455556666666654 457999999999998764332 1221100000 0000 0011111222 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 421 NGEVSKEGNEGN 432 (432) Q Consensus 421 ~~~~~~~~~e~~ 432 (432) ++..+..+.+++ T Consensus 460 ~~~~~~~~~~~~ 471 (474) T protein:vir:95 460 DGAQQQQQSENN 471 (474) T ss_pred CCCCCcCCCCcc Confidence 222222222222 No 202 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=98.27 E-value=1.9e-06 Score=52.01 Aligned_cols=393 Identities=9% Similarity=0.024 Sum_probs=157.9 Q ss_pred Cch---HHHHHHhccccccccccccccCCchHHHHHhhcCCcC--cccccHHHH-------hccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MKI---VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS--TISVKGKNA-------LKVATVFACIKILSESVSK 68 (432) Q Consensus 1 Mg~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~~a-------~~~~~v~~~i~~ia~~ia~ 68 (432) |.- .+.+..+++....... ....+..+...... ......... .......-+++..+..+-- T Consensus 23 ~~~~~~~~l~~~l~~~~~~~~~-------rl~~l~~YY~G~~~~~~~~~~~~~~~~~~~~~~v~n~~~~ivd~~a~~l~~ 95 (501) T protein:vir:25 23 MSREQLGALVADMWRLHISERQ-------WLDRIYEYTKGLRGRPEVPEGASDEVKELAKLSVKNVLSLVRDSFAQNLSV 95 (501) T ss_pred CChHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhcCCCchhccccCChhhhhhHhhhhcChHHHHHHHHHhhhcc Confidence 311 1111111110000000 00011111111100 000000000 1123444555555554322 Q ss_pred CceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEc Q lcl|Aclame:pro 69 LPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYID 148 (432) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~ 148 (432) ..|.+ .+ +. ....+..++. -|. .......+..+++.+|.+|+.+.++..|. .+..++|..|.++.+ T Consensus 96 ~gf~~---~d-~~---~~~~l~~i~~--~N~---~d~~~~~~~~~a~i~G~ay~~v~~de~~~--~i~~~sp~~~~~iy~ 161 (501) T protein:vir:25 96 VGYRN---AL-AK---ENDPAWEMWQ--RNR---MDARQAEVHRPALTYGASYVTVTPTDEGP--VFRTRSPRQILAVYA 161 (501) T ss_pred cceec---CC-cc---chHHHHHHHH--hcC---hhHHHHHHHHHHhhcCceEEEEecCCCCC--eEEEeccccEEEEEe Confidence 33332 11 11 1123333332 233 23555678899999999999998888774 455678888876653 Q ss_pred Cccce--eccceeEEEeccc-Cc---eEEE----------------------------------------------ccce Q lcl|Aclame:pro 149 DVGLL--NSKTKMWYVVNTG-GQ---QRVL----------------------------------------------KPEE 176 (432) Q Consensus 149 ~~~~~--~~~~~~~~~~~~~-~~---~~~~----------------------------------------------~~~~ 176 (432) +.... ......++..... +. ...+ ..-- T Consensus 162 D~~~~~~~~~ai~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP 241 (501) T protein:vir:25 162 DPSVDAWPQYALETWVAQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCP 241 (501) T ss_pred cCCCCcceeEEEEEEeeccccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCcccee Confidence 32111 0000111100000 00 0000 0112 Q ss_pred EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccc Q lcl|Aclame:pro 177 ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHR 256 (432) Q Consensus 177 vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~ 256 (432) |++|++... ...+|.|-++.+...++......-......+-.+.|..++.-- +.++.+. |+. ..++ T Consensus 242 iv~f~N~~~-~~~~g~sdie~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G~---~~~~~~~----~~~------~~~~ 307 (501) T protein:vir:25 242 VVRFVNGRD-ADDMIVGEVAPLILLQQAINSVNFDRLIVSRFGANPQRVISGW---TGSKAEV----LKA------SALR 307 (501) T ss_pred eEeccCccc-cCccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhCC---CCCccch----hhh------cccc Confidence 555553322 2345778666554444444443333333333333343333211 1122211 111 1244 Q ss_pred eeecC-CCceeeecCCChhHHH-HHHHHHHHHHHHHHHhcCChhhccCcccc-ccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 257 IALMP-VGYQFQPISLNMSDAQ-FLENTELTIRQIATAFGIKMHQLNDLSKA-TLNNIEQQQQQFYTDTLQATLTMYEQE 333 (432) Q Consensus 257 ~~vl~-~g~~~~~~~~~~~d~~-~~e~~~~~~~~I~~~~gvp~~~l~~~~~~-~~~~~~~~~~~~~~~~l~P~~~~i~~~ 333 (432) ++.++ ++.++.++... +++ +.+.++.....|+..-++|+..+++.... +..........+... ..-..+.+... T Consensus 308 i~~~~~~~~~~~q~~~~--~~~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~N~Sg~Al~~~~~~l~~k-a~~k~~~f~~~ 384 (501) T protein:vir:25 308 VWTFEDPEVKAQAFPPA--SVEPYNLILEEMLQHVAMVAQISPAQVTGKMINVSAEALAAAEANQQRK-LAAKRESFGES 384 (501) T ss_pred eeccCCCCceEEEeccc--ChHHHHHHHHHHHHHHHhhcCCChhhhccccCChHHHHHHHHHHHHHHH-HHHHHHHHHHH Confidence 66665 46777666543 333 77889999999999999999998754321 111111111111111 11111222222 Q ss_pred HHHh------hccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH-HhCCCCCC--Ccceeeecccc Q lcl|Aclame:pro 334 MTYK------LFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS-KEDLPPEA--GGDRLLVNGNM 404 (432) Q Consensus 334 l~~~------ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~ 404 (432) |.+- +...........+++.+......+..+.++++.++++.|+ +...+.. +.|+.+.+ ...+....... T Consensus 385 l~~~~rl~~~~~~~~~~~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~~~g~~~~~ie~~~~~~~e~~~ 463 (501) T protein:vir:25 385 WEQLLRLAAEMDDDPDTAADSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSMVPGMTQQTIQAIKDSLRGGEV 463 (501) T ss_pred HHHHHHHHHHHhCCCccccceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHhH Confidence 2110 1111111122345555567778899999999999998885 5555544 45876521 00000000000 Q ss_pred -----ccccc--cccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 405 -----LPIDM--AGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 405 -----~~~~~--~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .+... .+.....+++.....+..+..++ T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (501) T protein:vir:25 464 KSLVDKLLSNEPAPVPPPPPQAAAQALNEGGVNGN 498 (501) T ss_pred HHHHHHhhccCcCCCCCCCCCCCccccccccCCCC Confidence 00000 00001111111111111111111 No 203 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=98.24 E-value=2.2e-06 Score=51.62 Aligned_cols=408 Identities=9% Similarity=0.034 Sum_probs=177.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcC----------cccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----------TISVKGKNALKVATVFACIKILSESVSKLP 70 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~ 70 (432) +-..+.|+++...... .... .-..+...+-.... ......+ +..+.....++..+..+.+-| T Consensus 39 ~~~~~~i~~~i~~~~~---~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~k--i~~n~~k~Iv~~~~~yl~g~p 110 (511) T protein:vir:99 39 LQNVNEVSKYIEHHMD---YQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNR--VAHDYASYISDFINGYFLGNP 110 (511) T ss_pred hccHHHHHHHHHHHHH---hhHH---HHHHHHHHhcccCccccccCcccccccCcce--eecchHHHHHHHHHhhhcccC Confidence 2222223222110000 0000 00001111100000 0000000 123555667777777777788 Q ss_pred eEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCc Q lcl|Aclame:pro 71 LKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDV 150 (432) Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~ 150 (432) +.+...+++ ....+..++. . | ........++..++.+|.+|.++.++.+|.+ .+..++|..+.++.+.. T Consensus 111 ~~~~~~d~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vyd~~ 179 (511) T protein:vir:99 111 IQYQDDDKD-----VLEAIEAFND-L-N---DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNT 179 (511) T ss_pred ceeecCchH-----HHHHHHHHHh-h-c---CHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCC Confidence 876432211 1122223332 1 2 3456677788999999999999998888764 56778899888887654 Q ss_pred ccee-ccceeEEEec-ccC-------ceEEEccceEEEEecCCC-------------------------CCcccccCHHH Q lcl|Aclame:pro 151 GLLN-SKTKMWYVVN-TGG-------QQRVLKPEEILHFKNGIT-------------------------LDGLVGVPTME 196 (432) Q Consensus 151 ~~~~-~~~~~~~~~~-~~~-------~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~ 196 (432) .... .....+|... ..+ ....+.++.+.+++.... .+...|.|-+. T Consensus 180 ~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e 259 (511) T protein:vir:99 180 IERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYE 259 (511) T ss_pred CCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCCchh Confidence 2111 1111111110 000 011234444444321100 01236778788 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccc-ccccceeecCCCceeeecCCChhH Q lcl|Aclame:pro 197 YLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGL-QNSHRIALMPVGYQFQPISLNMSD 275 (432) Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~n~g~~~vl~~g~~~~~~~~~~~d 275 (432) .+...++....+.--..+.+...+.|-.++.-....+.++....++.-.-..... .-.+...-.++|.+++.+...... T Consensus 260 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 339 (511) T protein:vir:99 260 KVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDV 339 (511) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhchhhhhccCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCH Confidence 7777777666655555555555555555554433334333332221100000000 000111223445666655554445 Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhcc-chh Q lcl|Aclame:pro 276 AQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFL-DSE 343 (432) Q Consensus 276 ~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~-~~~ 343 (432) ..+....+...+.|+..-++|....... ++.++..... .....+...+.-.++.|...+...--. ... T Consensus 340 ~~~e~~~~~L~~~I~~~s~~P~~~~~~~~gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~ 419 (511) T protein:vir:99 340 QGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDVSK 419 (511) T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc Confidence 5566778888999999999987654322 2222111111 112333334444444443333221100 000 Q ss_pred hcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceee------eccccccccccccccC Q lcl|Aclame:pro 344 LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLL------VNGNMLPIDMAGQAYL 415 (432) Q Consensus 344 ~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~------~~~n~~~~~~~~~~~~ 415 (432) ... .+++.+..-...+..+.++.+.++ .|+++..-+.+++++-+.+ ..++.. .+.........+ ... T Consensus 420 ~~~--~i~i~f~~~~p~n~~e~~~~~~kl--~GiiS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~-~~~ 494 (511) T protein:vir:99 420 DFN--TVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKNMYQDP-RNI 494 (511) T ss_pred ccc--cceEEeCCCCCcCHHHHHHHHHHH--hccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhcccccC-CCC Confidence 111 234444555678888899988888 4889988888888653321 111110 000000000000 000 Q ss_pred CCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 416 KGGDTNGEVSKEGNEGN 432 (432) Q Consensus 416 ~gg~~~~~~~~~~~e~~ 432 (432) ..++.+++++.+.++.- T Consensus 495 ~~~~~~~~~~~~~d~~e 511 (511) T protein:vir:99 495 NDDEQDDSTKDSIDKKE 511 (511) T ss_pred CCCCCCCCCcCcccccC Confidence 00111111111111111 No 204 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=98.22 E-value=2.5e-06 Score=51.30 Aligned_cols=396 Identities=10% Similarity=0.021 Sum_probs=168.2 Q ss_pred CchHH----HHHHhccccccccccccccCCchHHHHHhhcCCcC----cccccHH--H-HhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MKIVD----SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----TISVKGK--N-ALKVATVFACIKILSESVSKL 69 (432) Q Consensus 1 Mg~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~v~~~--~-a~~~~~v~~~i~~ia~~ia~~ 69 (432) |+--. +|.+.+.... ... ..+....-+... ...+..+ . -.......-+|+..++.+--. T Consensus 1 ~~t~~d~i~~L~~~~~~~~---~r~-------~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~ 70 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDL---PNL-------LEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIE 70 (480) T ss_pred CCCHHHHHHHHHHHHHHHH---HHH-------HHHHHHHhccccchhcccccchhhhhhhhhcchHHHHHHHHHhhhccC Confidence 55322 1211111000 000 000011100000 0000000 0 011234455566666655333 Q ss_pred ceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC------CCCceEEEEEEcCcce Q lcl|Aclame:pro 70 PLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD------RKGKVQALWPIDASKV 143 (432) Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~------~~g~~~~l~~~~~~~v 143 (432) +|.+- ++ . .....+..++. + | ........+..+++.+|.||..+.+. .+|.+ .+.+++|..+ T Consensus 71 g~~~~---~d-~--~~~~~l~~i~~-~-N---~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~ 138 (480) T protein:vir:78 71 GFRIS---ED-S--EGLEELWNWWQ-A-N---DLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYM 138 (480) T ss_pred ceecC---CC-c--hhHHHHHHHHH-h-c---CHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccce Confidence 44321 11 1 11223444443 1 2 23556778899999999999987653 33433 4778889988 Q ss_pred EEEEcCccc--eeccceeEEEecccC-----------ceEE---------------------EccceEEEEecCCCCCcc Q lcl|Aclame:pro 144 TVYIDDVGL--LNSKTKMWYVVNTGG-----------QQRV---------------------LKPEEILHFKNGITLDGL 189 (432) Q Consensus 144 ~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~---------------------~~~~~vih~~~~~~~~~~ 189 (432) .++.|.... .......++.....+ .... +..=-|+||.+....... T Consensus 139 ~~i~D~~~~~~~~~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~ 218 (480) T protein:vir:78 139 YAELDPRNTRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNR 218 (480) T ss_pred EEEEcCCCccceEEEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCc Confidence 888875321 111111111000000 0011 111135667655555667 Q ss_pred cccCHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-CCceee Q lcl|Aclame:pro 190 VGVPTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-VGYQFQ 267 (432) Q Consensus 190 ~G~s~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-~g~~~~ 267 (432) +|.|-+.. +...++......-.......-.+.|..++.- ....+...+.....|... .+.++.++ ++.++. T Consensus 219 ~G~sdi~~~i~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 291 (480) T protein:vir:78 219 YGRSEISPELRKVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDIY------YGRILTLASEAAKIS 291 (480) T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhC-CCccccccccccchhhhh------hhhhccCCCCCceEE Confidence 78886653 3444444433333333333333445444431 111111111111112211 12334443 456777 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH-------------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 268 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ-------------QQFYTDTLQATLTMYEQEM 334 (432) Q Consensus 268 ~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~-------------~~~~~~~l~P~~~~i~~~l 334 (432) ++.....+ .+++..+..+.+++..-++|+..+++....+ ++.++.. ...+...+.-+++.+... T Consensus 292 ~~~~~~~~-~~~~~l~~~i~~~~~~~~~p~~~fg~~~~n~-~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~- 368 (480) T protein:vir:78 292 EFKAAELR-NFAEEMEVFRKEAASITGLPPQYLSSSSENP-ASAEAIIATDSRIVKMAERKGRIFGGAWERAMRIAMQI- 368 (480) T ss_pred ecCccCHH-HHHHHHHHHHHHHhcccCCCHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH- Confidence 76654433 3678888999999999999999997643221 1111111 111122222222222111 Q ss_pred HHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--Ccceeeecccc------ Q lcl|Aclame:pro 335 TYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEA--GGDRLLVNGNM------ 404 (432) Q Consensus 335 ~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~--~gd~~~~~~n~------ 404 (432) ...........+++.+..-...+..+.++.+.+++.+| +++..-+++++|+.+.+ ...+....... T Consensus 369 ----~~~~~~~~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~e~~~~~~~~~~~~~~~~ 444 (480) T protein:vir:78 369 ----MGREVTEEYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTL 444 (480) T ss_pred ----cCCCccccceeeeEEecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHh Confidence 11111111223444445555677888888888888866 67776778999988643 11111111111 Q ss_pred -cccccccc--ccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 405 -LPIDMAGQ--AYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 405 -~~~~~~~~--~~~~gg~~~~~~~~~~~e~~ 432 (432) .+....++ .....|+..++...+.+.-+ T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (480) T protein:vir:78 445 YSTTKAQADATPKPTVTETKTETQTSPSGFN 475 (480) T ss_pred hccccCCCccccCCCCCCCCCccCCCcccCC Confidence 11111111 11122222221111111111 No 205 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=98.21 E-value=2.6e-06 Score=51.19 Aligned_cols=388 Identities=10% Similarity=0.075 Sum_probs=175.6 Q ss_pred Cc-----------------------hHHHHHHhccccccccccccccCCchHHHHHhhcCCc----------C---cccc Q lcl|Aclame:pro 1 MK-----------------------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP----------S---TISV 44 (432) Q Consensus 1 Mg-----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------~---~~~v 44 (432) |- ..+.|+++....+... ..-..+..++.... . .... T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~ 74 (474) T protein:vir:96 2 IVIFWPNEKPYHERVVEQIKPKYETQEEMIIRLINDHKPKI-------DDITVGERYYNHDPDVLRLAPKLDNKGEIDPL 74 (474) T ss_pred eeeccCCCchhhhhHHHHhhhccCChHHHHHHHHHHHHHHH-------HHHHHHHHHhccCCcchhccchhccccccccc Confidence 00 0111111110000000 00000001110000 0 0000 Q ss_pred cHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE Q lcl|Aclame:pro 45 KGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI 124 (432) Q Consensus 45 ~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~ 124 (432) ....=+.++....+++..++.+-+-|+.+...+++ ....+...+. | ........++..++.+|.+|+.+ T Consensus 75 ~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~d~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~~ 143 (474) T protein:vir:96 75 KPDWRMFTNYHQNLVDQKVAYAVANPVTFSSDDDK-----SLKTIQEVLN---H---KWDDKLVDILTAASNKGIEWLQP 143 (474) T ss_pred ccchhcccchHHHHHHhhhhhhcccCceeecCchH-----HHHHHHHHHh---c---CHHHHHHHHHHHHHhcCeeEEEE Confidence 00000224566777888888887888776432221 1123333332 2 23445666788899999999998 Q ss_pred eeCCCCceEEEEEEcCcceEEEEcCcccee-ccceeEEEecccCceEEEccceEEEEec--------------------- Q lcl|Aclame:pro 125 EFDRKGKVQALWPIDASKVTVYIDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKN--------------------- 182 (432) Q Consensus 125 ~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~--------------------- 182 (432) ..+.+|.+. +..++|..+.++.++..... .....+|..........+..+.+.|++. T Consensus 144 y~d~~~~~~-i~~~~p~~~~~v~d~~~~~~~~~~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (474) T protein:vir:96 144 YIDENGEFK-TFRVPAEQAIPIWTNKERDTLKAFIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYY 222 (474) T ss_pred EecCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEeecCceEEEEEeCCeEEEEEecCCceeecccccccccccccc Confidence 888888764 78889999988876532111 1111122211111111222233322211 Q ss_pred ----CCCC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 183 ----GITL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSS 249 (432) Q Consensus 183 ----~~~~---------~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (432) +++. +...|.|-+..+...++....+.-...+.++..+.|-.++.--.....+. ....+ T Consensus 223 ~~~~~~~~g~iPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~---~~~~~----- 294 (474) T protein:vir:96 223 VGNKRVSWGRVPFIPFKNNPQEMSDLFMYKTIIDAMDKRLSDTQNTFDESTELIYILKGYEGQDLDE---FMRNL----- 294 (474) T ss_pred ccccccCCCceeEEEeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcccccc---hhhhh----- Confidence 0000 12357888888777887777666666666777777766655322211111 11111 Q ss_pred ccccccceeecC-CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCc-cccccccHHH----------HHHH Q lcl|Aclame:pro 250 GLQNSHRIALMP-VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDL-SKATLNNIEQ----------QQQQ 317 (432) Q Consensus 250 g~~n~g~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~-~~~~~~~~~~----------~~~~ 317 (432) ..++++.++ .|-+++.+........+....+...+.|+..-++|..-.... ++.++..... .... T Consensus 295 ---~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~ 371 (474) T protein:vir:96 295 ---KYYKAINVDGDGSGVDTIQIEVPVQSSKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKN 371 (474) T ss_pred ---hcCceEEecCCCCceeEEeecCChHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHH Confidence 113455554 455555555444445567788889999999999986543221 1111111111 1222 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--c Q lcl|Aclame:pro 318 FYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--G 395 (432) Q Consensus 318 ~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--g 395 (432) ++...+..+++.|..-+. .......+.+.| ..-+..+..+.++. +.++|+++...+++++++-+.+. . T Consensus 372 ~~~~~l~~~~~~i~~~~~-----~~~~~~~i~i~f--~~~~p~~~~e~~~~---~~~ag~iS~et~~~~~~~v~d~~~E~ 441 (474) T protein:vir:96 372 KTLTALQELLQYIIDFYK-----LNIKVQDVEITF--NFNVMVNELEQSQI---GVQSQYLSKETVVTNHPWVDDPVAEL 441 (474) T ss_pred HHHHHHHHHHHHHHHHhC-----CCcccceeeEEe--ccCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHH Confidence 333344444444433221 111122233444 44455566655554 45689999999999886533221 1 Q ss_pred ceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 396 DRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 396 d~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .++ -.. ..+.........++.++..+++.-|.| T Consensus 442 ~ri--~~E--~~e~~~~~~~~~~~~~~~~~d~~~e~~ 474 (474) T protein:vir:96 442 ERI--EQD--NIDFNKQLPPLEGDANGRAQDNESETN 474 (474) T ss_pred HHH--HHH--HHHHHhcccccccccccccCCCcccCC Confidence 111 000 000000111111222323333333444 No 206 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=98.17 E-value=3.2e-06 Score=50.69 Aligned_cols=404 Identities=11% Similarity=0.062 Sum_probs=179.4 Q ss_pred CchH---HHH----HHhcccccccccc-ccccCCchHHHH----HhhcCCcC--cccccHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MKIV---DSV----KKFFNFEKRQTSQ-VIELNKDDEKLL----EWLGISPS--TISVKGKNALKVATVFACIKILSESV 66 (432) Q Consensus 1 Mg~~---~~l----~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~g~~~~--~~~v~~~~a~~~~~v~~~i~~ia~~i 66 (432) |-+. ..| ...+...++..-. ....-.....+. .+.+.... .....+..=+.+....-.++..+.-+ T Consensus 8 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~YY~g~h~Il~r~~~~~~~~~~~~~d~~~~nnki~~nf~k~Ivd~~~~yl 87 (537) T protein:vir:78 8 KPIDQLGGLLNTEITTYMASNHIKWAHIGENYYNQENDIEKSRIFYMNDKGQLREDNYASNVKISHGFFTELVDQLAQYL 87 (537) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccccccccccccccccccccccccchHHHHHHHHhhhh Confidence 2221 111 1111100000000 000000000000 00000000 00000000012344555677777777 Q ss_pred ccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEE Q lcl|Aclame:pro 67 SKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVY 146 (432) Q Consensus 67 a~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~ 146 (432) -+-|+++...+++. ..+...|+.. +. .........++.++..+|.+|.++-.+.+|.+. +..++|..+-++ T Consensus 88 ~G~Pv~~~~~d~~~------~e~~~~l~~~-~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~~~~~-~~~i~p~~~~pv 158 (537) T protein:vir:78 88 LSNGVEVKVKDEDN------TQLDEILQEY-FD-EDFQATIDTLVTNASKKGFEGIFARTTSEGKLK-FQTVDGLTLIPV 158 (537) T ss_pred cccCceeecCcchh------HHHHHHHHHH-hh-ccHHHHHHHHHHHHhhcCeeEEEeeecCCCceE-EEEEccceeEEE Confidence 78888865433222 1233334322 11 233455677888999999999999988888764 677888888777 Q ss_pred EcCccceeccceeEEEecc-----cCc----eEEEccceEEEEecCC--------------------------------- Q lcl|Aclame:pro 147 IDDVGLLNSKTKMWYVVNT-----GGQ----QRVLKPEEILHFKNGI--------------------------------- 184 (432) Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~vih~~~~~--------------------------------- 184 (432) .++..........++.... ++. ...+.++.|.+++... T Consensus 159 ~d~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 238 (537) T protein:vir:78 159 FDDYGVLKMIIRWYSEIRYSTKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFE 238 (537) T ss_pred EcCCCCceeEEEEEeeeeccccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeecccccccccc Confidence 7755433222222211110 000 1123444444432110 Q ss_pred ----------CC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 185 ----------TL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFE 245 (432) Q Consensus 185 ----------~~---------~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (432) ++ +...|.|-+......++....+.-..++.+...+.|-.++.-......++ .++.+. T Consensus 239 ~~~~~~~~~~~~g~iPvv~f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~~~~~~~---~~~~l~ 315 (537) T protein:vir:78 239 DTDGYQVLGRSYSKFPFQLLYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFSGDSTDK---LRQNIK 315 (537) T ss_pred ccccccccccCCcceeEEEeccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCCCccchh---HHHHHh Confidence 00 12357788888888888777777777776666666655554322222121 222222 Q ss_pred HHhcccccccceeecCC--CceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccccc----------HHH Q lcl|Aclame:pro 246 SMSSGLQNSHRIALMPV--GYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNN----------IEQ 313 (432) Q Consensus 246 ~~~~g~~n~g~~~vl~~--g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~----------~~~ 313 (432) . .+.+.+-+. +++|..... .+......++...+.|...-.+|..--...++.++.. ... T Consensus 316 ~-------~~~i~v~~d~~~v~~l~~~~--~~~~~e~~ld~L~~~I~~~s~~~~~~~~~~gn~SGvAlk~~~~~l~~ka~ 386 (537) T protein:vir:78 316 A-------KKMIGVNGDNAGMEIQTVSI--PYEARKAKMDIDVENIYRSGMGFNSTAVGDGNVTNVVIKSRYTLLAMKAR 386 (537) T ss_pred h-------cCceeecCCCCceeEEEecC--CHHHHHHHHHHHHHHHHHhcCCCCCccccccCCcHHHHHHHHhhHHHHHH Confidence 1 122223223 355544443 3333344555666666655444332111111111111 112 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA 393 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~ 393 (432) ....++...++-+++.|...+..+-.... ....+.+.+..-+..+..+.++.+.++.+.|+++..-+.+.+++-..+ T Consensus 387 ~ke~~f~~~l~~~~~~i~~~~~~~~~~~~---d~~~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~p~vdd~ 463 (537) T protein:vir:78 387 KMETSLRKVLRWCADMVVSDIALRGLGEY---DSNDICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVAPRIGDD 463 (537) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccc---ccceeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhCCCCCCH Confidence 33445556666666666655543211111 112345555666788999999999999999999988888877553322 Q ss_pred Ccce------------e--------eeccccccccccccccCCCCCCC------CCCCCCCCCCC Q lcl|Aclame:pro 394 GGDR------------L--------LVNGNMLPIDMAGQAYLKGGDTN------GEVSKEGNEGN 432 (432) Q Consensus 394 ~gd~------------~--------~~~~n~~~~~~~~~~~~~gg~~~------~~~~~~~~e~~ 432 (432) .-.+ . .......|-. + ....|... ..+.+..++.| T Consensus 464 e~ek~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~d~~~~~~~~~ 524 (537) T protein:vir:78 464 ETLKLIAEELDLDYNELKDALAEQDAQSLDVSPDV---Q-AMLDGLPVNANQPPVDPNQPVADPN 524 (537) T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcccccCcCcch---h-hhcCCCCCCCCCCCCCccCCCCCCC Confidence 0000 0 0000000100 0 00011111 12222333333 No 207 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=98.16 E-value=3.4e-06 Score=50.53 Aligned_cols=402 Identities=10% Similarity=0.013 Sum_probs=165.1 Q ss_pred CchHHH-HHHhccccccccccccccCCchHHHHHhhcCCcC----cccccHH--H-HhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDS-VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS----TISVKGK--N-ALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~v~~~--~-a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) |+--.- |......-.+.... ...+....-+... ...+..+ . -........+|+..++.+--.+|. T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r-------~~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~ 73 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPN-------LLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFR 73 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHhccccccccccccchhHhhhhhhcchHHHHHHHHHhhhccCcee Confidence 554321 11111100000000 0000011100000 0000000 0 011234455666666654333443 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeC------CCCceEEEEEEcCcceEEE Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD------RKGKVQALWPIDASKVTVY 146 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~------~~g~~~~l~~~~~~~v~~~ 146 (432) +- ++. .....+..++.. | ........++.+++.+|.||..+-+. ..|. ..+.+++|..+.++ T Consensus 74 ~~---~d~---~~~~~l~~i~~~--N---~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~-~~i~~~~p~~~~~~ 141 (480) T protein:vir:78 74 IS---EDS---EGLEELWNWWQA--N---DLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGI-PLIRVESPLYMYAE 141 (480) T ss_pred cC---CCc---hhHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCe-eEEEEEcccceEEE Confidence 21 111 112234444431 2 23466778899999999999988653 2343 34678888888888 Q ss_pred EcCcc--ceeccceeEEEecc-----------cCceEE---------------------EccceEEEEecCCCCCccccc Q lcl|Aclame:pro 147 IDDVG--LLNSKTKMWYVVNT-----------GGQQRV---------------------LKPEEILHFKNGITLDGLVGV 192 (432) Q Consensus 147 ~~~~~--~~~~~~~~~~~~~~-----------~~~~~~---------------------~~~~~vih~~~~~~~~~~~G~ 192 (432) .|... ........++.... .+.... +..=-|++|++.......+|. T Consensus 142 ~D~~~~~~~~~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~ 221 (480) T protein:vir:78 142 LDPRNTRRVTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGR 221 (480) T ss_pred EcCCCccceEEEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCc Confidence 77431 11111111100000 011111 111135667655555667888 Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec-CCCceeeecC Q lcl|Aclame:pro 193 PTMEY-LKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM-PVGYQFQPIS 270 (432) Q Consensus 193 s~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl-~~g~~~~~~~ 270 (432) |-+.. +...++......-......+-.+.|..++.-. ...+...+.....|... .+.+..+ +++.++.++. T Consensus 222 s~i~~~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 294 (480) T protein:vir:78 222 SEISPELRKVTDAASRTLMNLQSASQILGTPLRVISGV-TTDELTNDGENTTLDIY------YGRILTLASEAAKISEFK 294 (480) T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcC-Cccccccccccchhhhh------hhhhccCCCCCceEEecC Confidence 86653 33444443333333333333334454444311 11111111111112211 1223333 3457777766 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHH----HHHHHHh------hcc Q lcl|Aclame:pro 271 LNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMY----EQEMTYK------LFL 340 (432) Q Consensus 271 ~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i----~~~l~~~------ll~ 340 (432) ....+. +++..+....+|+..=++|+..+++.... -++.+++. +....+.-.+... ...|.+. +.. T Consensus 295 ~~~~~~-~~~~l~~~i~~~~~~~~~p~~~~g~~~~n-~~Sg~Alk--~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g 370 (480) T protein:vir:78 295 AAELRN-FAEEMEVFRKEAASITGLPPQYLSSSSEN-PASAEAII--ATDSRIVKMAERKGRIFGGAWERAMRIAMQIMG 370 (480) T ss_pred ccCHHH-HHHHHHHHHHHHhcccCCChHHhccccCc-chHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC Confidence 543333 67888888899999999999999764322 11222211 1111111111111 1112111 111 Q ss_pred chhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCC--cceeeeccc---------cccc Q lcl|Aclame:pro 341 DSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGG--FLKPNEARSKEDLPPEAG--GDRLLVNGN---------MLPI 407 (432) Q Consensus 341 ~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g--~~t~nE~R~~~gl~p~~~--gd~~~~~~n---------~~~~ 407 (432) .........+++.+..-...+..+.++.+.+++.+| +++..-+++.+|+.+.+- .++...... ..+. T Consensus 371 ~~~~~~~~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~ 450 (480) T protein:vir:78 371 REVTEEYTRLETVWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKA 450 (480) T ss_pred CCccccceeeeEEecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccc Confidence 101111122333344445667788888888888866 677777888898876421 111100000 0000 Q ss_pred cccccccCCCCCCCCCCCCC-CCCCC Q lcl|Aclame:pro 408 DMAGQAYLKGGDTNGEVSKE-GNEGN 432 (432) Q Consensus 408 ~~~~~~~~~gg~~~~~~~~~-~~e~~ 432 (432) +.........|+..++..++ ++.+- T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (480) T protein:vir:78 451 QADATPKPTVTETKTETQTSPSGFNR 476 (480) T ss_pred cCCCCCCCCCCCCCCccccccCCCCc Confidence 00001111112211111111 11111 No 208 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=98.13 E-value=3.9e-06 Score=50.25 Aligned_cols=394 Identities=9% Similarity=0.010 Sum_probs=174.1 Q ss_pred Cc-------------hHHHHHHhccccccccccc---cccCCchHHH------HHhhcCCcCcccccHHHHhccHHHHHH Q lcl|Aclame:pro 1 MK-------------IVDSVKKFFNFEKRQTSQV---IELNKDDEKL------LEWLGISPSTISVKGKNALKVATVFAC 58 (432) Q Consensus 1 Mg-------------~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~g~~~~~~~v~~~~a~~~~~v~~~ 58 (432) |+ ..+.|.++........... .........+ ..+-+......+. .=+..+....+ T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~---~ki~~n~~k~I 89 (474) T protein:vir:94 13 YGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPD---WRITTNFHQNL 89 (474) T ss_pred hhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCc---ceeecchHHHH Confidence 11 0011111110000000000 0000000000 0000000000000 00124566777 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..++.+-.-|+.+...+++ .. .....++. | ........++.+.+.+|.+|+.+..+.+|.+ .+..+ T Consensus 90 vd~~~~~l~g~p~~~~~~d~~-----~~-~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~ 157 (474) T protein:vir:94 90 VDQKVSYVASKPVTYSCEDEN-----VL-KVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRV 157 (474) T ss_pred HHHHHhhhhcCCceeccCcHH-----HH-HHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEE Confidence 888888888888876432211 11 11222221 2 2345566778999999999999988888865 46778 Q ss_pred cCcceEEEEcCcccee-ccceeEEEecccCceEEEccceEEEEecCC------------------------------CCC Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNGI------------------------------TLD 187 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------------------------------~~~ 187 (432) +|..+.++.+...... .....+|..........+..+.+.+++... ..+ T Consensus 158 ~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n 237 (474) T protein:vir:94 158 PAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN 237 (474) T ss_pred cccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC Confidence 8888888876532111 111111111111111122233332221100 001 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceee Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 267 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~ 267 (432) ...|.|-+..+...++....+.-...+.++..+.|..++.--.....+. ..... ...+++.+++|.+++ T Consensus 238 n~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~~~~---~~~~~--------~~~~~i~~~~~~~~~ 306 (474) T protein:vir:94 238 NPEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGEDLEE---FMRGL--------KYYKAINVDGDGGVE 306 (474) T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccchh---hhhhh--------hccceeeccCCCcee Confidence 2368888888777777776666666666666666666655432221111 11111 123456666666665 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcc-CccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 268 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTY 336 (432) Q Consensus 268 ~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~-~~~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~ 336 (432) .+........+....+...+.|...-++|..-.. ..++.++.... ......+...+..+++.|..-++ T Consensus 307 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~- 385 (474) T protein:vir:94 307 TIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN- 385 (474) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC- Confidence 5554444555667778888888888888753322 11111211111 12233444455555555543322 Q ss_pred hhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccc-ccccccc Q lcl|Aclame:pro 337 KLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NML-PIDMAGQ 412 (432) Q Consensus 337 ~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~-~~~~~~~ 412 (432) .......+.+.| +.-...+..+.++ .+.++|+++..-+++++++-+.+ ..+++..-. ... ....... T Consensus 386 ----~~~d~~~i~v~f--~~~~p~~~~e~a~---~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~~~~~~~~~ 456 (474) T protein:vir:94 386 ----LKTDVKDIEISF--NFNRMMNDAEQSQ---IIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYNKQLPNLDD 456 (474) T ss_pred ----CCcccceeeEEe--ccCcccCHHHHHH---HHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccCC Confidence 111223334444 3334445555444 45567999998899988763321 111111000 000 0000011 Q ss_pred ccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 AYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 413 ~~~~gg~~~~~~~~~~~e 430 (432) ....++..+++++++.+| T Consensus 457 ~~~~~~~~~~~~~~~~~e 474 (474) T protein:vir:94 457 GGADGAQQQEGSNNKESE 474 (474) T ss_pred CCCCCcccCCCCcccccC Confidence 111112222233333333 No 209 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=98.13 E-value=3.9e-06 Score=50.25 Aligned_cols=394 Identities=9% Similarity=0.010 Sum_probs=174.1 Q ss_pred Cc-------------hHHHHHHhccccccccccc---cccCCchHHH------HHhhcCCcCcccccHHHHhccHHHHHH Q lcl|Aclame:pro 1 MK-------------IVDSVKKFFNFEKRQTSQV---IELNKDDEKL------LEWLGISPSTISVKGKNALKVATVFAC 58 (432) Q Consensus 1 Mg-------------~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~g~~~~~~~v~~~~a~~~~~v~~~ 58 (432) |+ ..+.|.++........... .........+ ..+-+......+. .=+..+....+ T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~---~ki~~n~~k~I 89 (474) T protein:vir:97 13 YGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPD---WRITTNFHQNL 89 (474) T ss_pred hhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCc---ceeecchHHHH Confidence 11 0011111110000000000 0000000000 0000000000000 00124566777 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEE Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPI 138 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~ 138 (432) ++..++.+-.-|+.+...+++ .. .....++. | ........++.+.+.+|.+|+.+..+.+|.+ .+..+ T Consensus 90 vd~~~~~l~g~p~~~~~~d~~-----~~-~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~-~i~~~ 157 (474) T protein:vir:97 90 VDQKVSYVASKPVTYSCEDEN-----VL-KVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRV 157 (474) T ss_pred HHHHHhhhhcCCceeccCcHH-----HH-HHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEecCCCee-EEEEE Confidence 888888888888876432211 11 11222221 2 2345566778999999999999988888865 46778 Q ss_pred cCcceEEEEcCcccee-ccceeEEEecccCceEEEccceEEEEecCC------------------------------CCC Q lcl|Aclame:pro 139 DASKVTVYIDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNGI------------------------------TLD 187 (432) Q Consensus 139 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------------------------------~~~ 187 (432) +|..+.++.+...... .....+|..........+..+.+.+++... ..+ T Consensus 158 ~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n 237 (474) T protein:vir:97 158 PAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKN 237 (474) T ss_pred cccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecC Confidence 8888888876532111 111111111111111122233332221100 001 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceee Q lcl|Aclame:pro 188 GLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQ 267 (432) Q Consensus 188 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~ 267 (432) ...|.|-+..+...++....+.-...+.++..+.|..++.--.....+. ..... ...+++.+++|.+++ T Consensus 238 n~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~~~~---~~~~~--------~~~~~i~~~~~~~~~ 306 (474) T protein:vir:97 238 NPEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGEDLEE---FMRGL--------KYYKAINVDGDGGVE 306 (474) T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccchh---hhhhh--------hccceeeccCCCcee Confidence 2368888888777777776666666666666666666655432221111 11111 123456666666665 Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHhcCChhhcc-CccccccccHH----------HHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 268 PISLNMSDAQFLENTELTIRQIATAFGIKMHQLN-DLSKATLNNIE----------QQQQQFYTDTLQATLTMYEQEMTY 336 (432) Q Consensus 268 ~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~-~~~~~~~~~~~----------~~~~~~~~~~l~P~~~~i~~~l~~ 336 (432) .+........+....+...+.|...-++|..-.. ..++.++.... ......+...+..+++.|..-++ T Consensus 307 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~- 385 (474) T protein:vir:97 307 TIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNN- 385 (474) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC- Confidence 5554444555667778888888888888753322 11111211111 12233444455555555543322 Q ss_pred hhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccc-ccccccc Q lcl|Aclame:pro 337 KLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NML-PIDMAGQ 412 (432) Q Consensus 337 ~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~-~~~~~~~ 412 (432) .......+.+.| +.-...+..+.++ .+.++|+++..-+++++++-+.+ ..+++..-. ... ....... T Consensus 386 ----~~~d~~~i~v~f--~~~~p~~~~e~a~---~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~~~~~~~~~ 456 (474) T protein:vir:97 386 ----LKTDVKDIEISF--NFNRMMNDAEQSQ---IIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYNKQLPNLDD 456 (474) T ss_pred ----CCcccceeeEEe--ccCcccCHHHHHH---HHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccCC Confidence 111223334444 3334445555444 45567999998899988763321 111111000 000 0000011 Q ss_pred ccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 413 AYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 413 ~~~~gg~~~~~~~~~~~e 430 (432) ....++..+++++++.+| T Consensus 457 ~~~~~~~~~~~~~~~~~e 474 (474) T protein:vir:97 457 GGADGAQQQEGSNNKESE 474 (474) T ss_pred CCCCCcccCCCCcccccC Confidence 111112222233333333 No 210 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=98.02 E-value=6.8e-06 Score=48.91 Aligned_cols=378 Identities=10% Similarity=0.053 Sum_probs=174.8 Q ss_pred CchHHH---HHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEeec Q lcl|Aclame:pro 1 MKIVDS---VKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQED 77 (432) Q Consensus 1 Mg~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 77 (432) +....+ +++.....-.-..... ........+.......++. =+.++.....++..++-+-+-|+.+...+ T Consensus 18 ~~~~~~~~~~~~Yy~g~~~I~~~~~-----~~~~~~~~~~~~~~~~~~~--ki~~n~~k~Iv~~~~~yl~G~p~~~~~~d 90 (470) T protein:vir:10 18 NDLINNYKQAVNYYENKTDITTRNN-----GKAKLNKEGKKDPLRSADN--RIPSNFYQLLVDQEAGYVASVFPDIDVGK 90 (470) T ss_pred HHHHHHHHHHHHHhccccchhcccc-----chhcccccccccccccCCc--ccccchHHHHHHhhhhheeccceeeecCc Confidence 111111 1111111000000000 0000000000000000000 11244556667777787878887764333 Q ss_pred CCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc--eec Q lcl|Aclame:pro 78 EYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL--LNS 155 (432) Q Consensus 78 ~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~--~~~ 155 (432) ++ ....+...++. ....-...+...++.+|.+|..+..+..|.+ .+..++|..+-++.++... ... T Consensus 91 ~~-----~~~~l~~~~~~------~~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~-~~~~~~p~~~~~v~d~~~~~~~~a 158 (470) T protein:vir:10 91 DA-----DNKKIIDVLGD------DRALTLNGLLVDSSNAGRAWLHYWIDEDGNF-RYGIIQPDQITPIYATTLDNKLLG 158 (470) T ss_pred hH-----HHHHHHHHHhh------hHHHHHHHHHHHHhhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEE Confidence 21 11233343431 2345556778899999999999999888865 4677888888888765321 111 Q ss_pred cceeEEEecccC-c----eEEEccceE---------------------------------------------EEEecCCC Q lcl|Aclame:pro 156 KTKMWYVVNTGG-Q----QRVLKPEEI---------------------------------------------LHFKNGIT 185 (432) Q Consensus 156 ~~~~~~~~~~~~-~----~~~~~~~~v---------------------------------------------ih~~~~~~ 185 (432) ....+......+ . ...+....+ +++++ T Consensus 159 ~ir~y~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n--- 235 (470) T protein:vir:10 159 ILRSYKQLDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFSK--- 235 (470) T ss_pred EEEEEEeeecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEEEeec--- Confidence 111111111111 0 011222222 33332 Q ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeec----- Q lcl|Aclame:pro 186 LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALM----- 260 (432) Q Consensus 186 ~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl----- 260 (432) ...|.|-+......++....+.-...+.++..+.|-.++.--...+.++ ....+.. .+.+.+ T Consensus 236 --n~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~~~~---~~~~~~~--------~~~i~~~~~~~ 302 (470) T protein:vir:10 236 --NKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGADLHQ---FMNDLRK--------YKSIKINNTGN 302 (470) T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCccccch---hhhhhhh--------cCeEeccCCCC Confidence 2357888888888888777776666666676677766665433222122 1222221 112222 Q ss_pred --CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHH----------HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 261 --PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIE----------QQQQQFYTDTLQATLT 328 (432) Q Consensus 261 --~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~----------~~~~~~~~~~l~P~~~ 328 (432) +++++|.....+ ...+...++...+.|+..-++|..-....++.++.... ...+..+..++..+++ T Consensus 303 ~~~~~~~~lt~~~~--~~~~~~~~~~L~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~ 380 (470) T protein:vir:10 303 GDNSGVDKLQIDIP--VEARDDALKITRKNIFLFGQGIDPANFESSNASGVAIKMLYSHLELKAAKTQTYFEHAINELVR 380 (470) T ss_pred CcCceeEEEeecCC--hHHHHHHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 234555554443 33455777888888988888876433222222211111 1223444455555555 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecc-ccc Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNG-NML 405 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~-n~~ 405 (432) .|...++.+ . .....+.+.+..-+..|..+.++.+.++ .|+++..-+++++++-..+ ...++-.-. ... T Consensus 381 ~i~~~l~~~-----~-~d~~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~p~v~D~~~E~eri~~E~~e~~ 452 (470) T protein:vir:10 381 AIMRYLNFS-----D-ADKRHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKANPIVDDWQQELKDLAKDKEEND 452 (470) T ss_pred HHHHHhccc-----C-cccceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHH Confidence 554433321 1 1112445555777788999999988887 6889988888888653322 111110000 000 Q ss_pred cccccccccCCCCCCCCCC Q lcl|Aclame:pro 406 PIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 406 ~~~~~~~~~~~gg~~~~~~ 424 (432) +.... .....+++.+++. T Consensus 453 ~~~~~-~~~~~~~~~dde~ 470 (470) T protein:vir:10 453 PYSNQ-ADELNGKGVNDEQ 470 (470) T ss_pred Hhhcc-ccccCCCCCCCCC Confidence 00000 0011111111111 No 211 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=97.99 E-value=8e-06 Score=48.51 Aligned_cols=386 Identities=14% Similarity=0.066 Sum_probs=174.0 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhh-------cCCcC-cccccHHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-------GISPS-TISVKGKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~-~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) |. .+-|.++........... ..+..+. ..... ......+ +..+.....++..+..+-.-|+. T Consensus 17 ~~-~~~i~~~i~~~~~~~~r~-------~~~~~Yy~g~~~i~~~~~~~~~~~~~k--i~~n~~~~ivd~~~~~l~g~~~~ 86 (452) T protein:vir:36 17 IT-VEVVTKFMEKHKLEVARY-------EYLKNMYLGIMAIDDEPAKDSWKPDNR--LAVNFTKYIVDTFTGYFNGIPVK 86 (452) T ss_pred CC-HHHHHHHHHHHHHHHHHH-------HHHHHHhccccccccCccccccCccce--eecchHHHHHHHHhhhhcccCce Confidence 32 111222111000000000 0000110 00000 0000001 12456667778777777777777 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGL 152 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~ 152 (432) +...+++ ....+..++.. | ........++...+.+|.+|..+..+.+|.+ .+..++|..+.++.+.... T Consensus 87 ~~~~d~~-----~~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~~~~ 155 (452) T protein:vir:36 87 KSHSDKE-----ILTKLQEFDNL--N---DMEDEESELAKMACIYGRAFEFLYQDEDTQT-NVVYNSPENMFMVYDDTVK 155 (452) T ss_pred eecCChh-----HHHHHHHHHhh--c---ChhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCC Confidence 6433221 11223333321 2 3345667788999999999999988888865 4677888888887765321 Q ss_pred eeccceeEEEecccCc--eEEEccceEEEEec-----------CCC---------CCcccccCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 LNSKTKMWYVVNTGGQ--QRVLKPEEILHFKN-----------GIT---------LDGLVGVPTMEYLKSTLENSASADK 210 (432) Q Consensus 153 ~~~~~~~~~~~~~~~~--~~~~~~~~vih~~~-----------~~~---------~~~~~G~s~~~~~~~~~~~~~~~~~ 210 (432) ........+....++. ...+.++.+.++.. +++ .+...|.|-+..+...++....+.- T Consensus 156 ~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~g~sd~e~v~~liDa~d~~~s 235 (452) T protein:vir:36 156 QEPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFNKAIS 235 (452) T ss_pred CceEEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCCCCCCcchHHHHHHHHHHHHHHH Confidence 1111111111111111 11222222222210 000 0123577877777777776666666 Q ss_pred HHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC-----CCceeeecCCChhHHHHHHHHHHH Q lcl|Aclame:pro 211 FINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP-----VGYQFQPISLNMSDAQFLENTELT 285 (432) Q Consensus 211 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~ 285 (432) ...+.+...+.|-.++.- ...+++....++. ++.+.++ .+.+++.+........+....+.. T Consensus 236 ~~~~~~~~~~~p~~~~~g-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 302 (452) T protein:vir:36 236 EKANDVDYFSDQYLTFLG-AAVEEEDLKNIRS------------NRVINYYADGEGKNVDVKFLEKPDSDSQTENLLDRL 302 (452) T ss_pred HHHHHHHHhcCceeEeec-CCcCchhhhhhhh------------cceEEecCCCCccCCcceeEeecCCHHHHHHHHHHH Confidence 666666666677666543 2333333322211 1122221 122333333333445566778888 Q ss_pred HHHHHHHhcCChhhccCccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhh Q lcl|Aclame:pro 286 IRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVD 355 (432) Q Consensus 286 ~~~I~~~~gvp~~~l~~~~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~ 355 (432) .+.|+..-++|..-....++.++..... .....+...+..+++.|..-+..+ ....-... +.+.+. T Consensus 303 ~~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~~~~--i~i~f~ 378 (452) T protein:vir:36 303 TKLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNV--SNKDSWKD--IEYTFT 378 (452) T ss_pred HHHHHHHhCccccCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcccccc--ceEEeC Confidence 8999999999864333222222111111 223344445555555554433221 11111122 344445 Q ss_pred hhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CcceeeeccccccccccccccCCCCCC-CCCCCCCCCCCC Q lcl|Aclame:pro 356 AILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDT-NGEVSKEGNEGN 432 (432) Q Consensus 356 ~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~-~~~~~~~~~e~~ 432 (432) .-...|..+.++.+.++ .|+++..-+.+++++-+.+ ..++.. +.-. ... ...+..+. .....+..++++ T Consensus 379 ~~~p~d~~~~a~~~~k~--~g~iS~et~~~~~~~~~d~~~E~~ri~--~E~~--~~~--~~~~~~~~~~~~~~~~~~~~~ 450 (452) T protein:vir:36 379 RNEPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIK--KEEA--STA--IFDKDKQPSEKGTDTVVSETN 450 (452) T ss_pred CCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHH--HHHH--HHH--HHHhhccCCCCcccccCcccc Confidence 66678888899988887 5789988888888764322 111110 0000 000 00011111 111112222222 No 212 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=97.86 E-value=1.4e-05 Score=47.20 Aligned_cols=397 Identities=11% Similarity=0.065 Sum_probs=173.5 Q ss_pred CchH--------------HHHHHhccccccccccccccCCchHHHHHhhcCCcC------cccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MKIV--------------DSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS------TISVKGKNALKVATVFACIK 60 (432) Q Consensus 1 Mg~~--------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~~~v~~~~a~~~~~v~~~i~ 60 (432) |.|+ +.|.+......... ..-..+..+.-.... ...--...=+..+....+++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~Iv~ 73 (499) T protein:vir:10 1 MAVVIDKDLLDDVNEPNIEAINYAIRELQNRK-------KRLDKLSDYYNGKQEIEKHEFDNATVEAANVMVNHAKYITD 73 (499) T ss_pred CccchhhhHHhhhhcCCHHHHHHHHHHHHHHH-------HHHHHHHHHhccccchhcCCcCcCCCCcceeecchHHHHHH Confidence 3332 11211111000000 000011111111000 00000000112345666778 Q ss_pred HHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce-------- Q lcl|Aclame:pro 61 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-------- 132 (432) Q Consensus 61 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~-------- 132 (432) ..+..+-+-|+.+...++.. ...+..++.. | ....+...+....+.+|.+|.++..+.+|.+ T Consensus 74 ~~~~~l~g~p~~~~~~~~~~-----~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~ 143 (499) T protein:vir:10 74 MNVGFMTGNPVKYVAEKGKN-----IDDILEVFNQ--I---DIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGN 143 (499) T ss_pred HHhhhhcccCceeecCChhH-----HHHHHHHHhh--c---CHhHHHHHHHHHHHhcCceEEEEEecccccccccccccc Confidence 88877777777754322211 1233333321 2 3345677888999999999999888777643 Q ss_pred --------EEEEEEcCcceEEEEcCccceeccc-e-eEEEeccc-Cc----eEEEccceEEEEecC-------------- Q lcl|Aclame:pro 133 --------QALWPIDASKVTVYIDDVGLLNSKT-K-MWYVVNTG-GQ----QRVLKPEEILHFKNG-------------- 183 (432) Q Consensus 133 --------~~l~~~~~~~v~~~~~~~~~~~~~~-~-~~~~~~~~-~~----~~~~~~~~vih~~~~-------------- 183 (432) ..+..++|..+-++.+......... . .++..... +. ...+.++.|.+++.. T Consensus 144 ~~~~~~~~~~~~~v~p~~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~ 223 (499) T protein:vir:10 144 EKLTPNTELKIEVIDPRATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYD 223 (499) T ss_pred cccccccceEEEEEcccceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceeccc Confidence 2366677877766665432111111 1 11111111 11 112333333333210 Q ss_pred --CCC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC-HHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 184 --ITL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN-EDAKKVFRENFESMSSGL 251 (432) Q Consensus 184 --~~~---------~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 251 (432) ++. +...|.|-+..+...++....+.-...+.++..+.|-.++.-..... .+....++ T Consensus 224 ~~~~~g~vPvv~~~n~~~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~---------- 293 (499) T protein:vir:10 224 GENLFGAVPIIEFRNNEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTFGFGLGDDKDDIQRLK---------- 293 (499) T ss_pred ccCCCCccceEEecCCCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCccccccchhhhhh---------- Confidence 000 12357777777777777766665555566666677766665322111 11111111 Q ss_pred ccccceee--cCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccH----------HHHHHHH Q lcl|Aclame:pro 252 QNSHRIAL--MPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNI----------EQQQQQF 318 (432) Q Consensus 252 ~n~g~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~----------~~~~~~~ 318 (432) .+.+.. .++|.+++.+........+....+...+.|...-++|..-... .++.++... .+..... T Consensus 294 --~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~k~~~k~~~ 371 (499) T protein:vir:10 294 --RGAIEAPPREEGADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMGNVSGEAMKFKLFGLENLLSIKQRY 371 (499) T ss_pred --hcceeccCCCCCCcceEEeccCCHHHHHHHHHHHHHHHHHHhCcccCCchhhcccchHHHHHHHHHHHHHHHHHHHHH Confidence 122222 3455566655544444556677778888888888887532211 111111111 1122344 Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccc Q lcl|Aclame:pro 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGD 396 (432) Q Consensus 319 ~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd 396 (432) +...+..+++.+..-++.+ .......+ +++.+..-...+..+.++.+.++ .|+++..-++++++.-+.+ ..+ T Consensus 372 ~~~~l~~~~~li~~~~~~~--~~~~d~~~--i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ 445 (499) T protein:vir:10 372 FFDGLRRRLKLIQTIVNIK--GANDDASG--CKISLVANIPSNLSDVVNNVKNA--DGIIPRKYTYSWLPDVDNPQDVID 445 (499) T ss_pred HHHHHHHHHHHHHHHHhcc--CCcccccc--ceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHH Confidence 4445555555555443321 11111122 33334555677888999999888 6889998888888663321 111 Q ss_pred eeee------cccccccccc--ccccCCCCCCCCCCC-CCCCCCC Q lcl|Aclame:pro 397 RLLV------NGNMLPIDMA--GQAYLKGGDTNGEVS-KEGNEGN 432 (432) Q Consensus 397 ~~~~------~~n~~~~~~~--~~~~~~gg~~~~~~~-~~~~e~~ 432 (432) ++.. .....+.... ......+++...+++ .+++..| T Consensus 446 ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (499) T protein:vir:10 446 EMNQQDAETIKKNQEALRGQDPDRLELEDKQDDSSENDKEAGSNH 490 (499) T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccCCCCCCCcccc Confidence 1100 0000111000 000011111111111 1111111 No 213 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.80 E-value=1.8e-05 Score=46.60 Aligned_cols=396 Identities=14% Similarity=0.044 Sum_probs=179.0 Q ss_pred CchHH---------------HHHHhccccccccccccccCCchHHHHHhhcCCc---------CcccccHHHHhccHHHH Q lcl|Aclame:pro 1 MKIVD---------------SVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP---------STISVKGKNALKVATVF 56 (432) Q Consensus 1 Mg~~~---------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~v~~~~a~~~~~v~ 56 (432) |.|.- .|.++....... ...-..+..+..... ...+ +.+ +..+... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-------~~r~~~~~~yy~g~~~i~~~~~~~~~~~-~~k--i~~n~~~ 70 (453) T protein:vir:73 1 MNLKPIKLMTYSRDEEITDKVVNDFMKKHQEE-------VERYEYLGNMYKGIMEISSQKAKDSWKP-DNR--LTNNFAK 70 (453) T ss_pred CccccceeeeccccccCCHHHHHHHHHHHHHH-------HHHHHHHHHHhccccchhcCCCCCccCc-cce--eecchHH Confidence 33220 011110000000 000000011110000 0000 001 1245566 Q ss_pred HHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEE Q lcl|Aclame:pro 57 ACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALW 136 (432) Q Consensus 57 ~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~ 136 (432) ..++..+..+-.-|+.+...++ .....+...+.. | ........++.+.+.+|.+|+.+..+.+|.+ .+. T Consensus 71 ~ivd~~~~~l~g~~~~~~~~d~-----~~~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~ 139 (453) T protein:vir:73 71 YIVDTFVGYFNGIPIKKTHDDK-----SVLEAMQLFDNL--N---DMEDEESELAKIACVYGRAYELMYQNESTES-EVI 139 (453) T ss_pred HHHHHhhhhhcccCceeecCCh-----HHHHHHHHHHHh--c---ChhHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEE Confidence 6777777777666766532221 111122222221 2 3345666788999999999999998888876 466 Q ss_pred EEcCcceEEEEcCccceeccceeEEEecccCce--EEEccceEEEEecC-----------CCC---------CcccccCH Q lcl|Aclame:pro 137 PIDASKVTVYIDDVGLLNSKTKMWYVVNTGGQQ--RVLKPEEILHFKNG-----------ITL---------DGLVGVPT 194 (432) Q Consensus 137 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vih~~~~-----------~~~---------~~~~G~s~ 194 (432) .++|..+.++.++..........++....++.. ..+..+.+++++.. ++. +...|.|- T Consensus 140 ~~~p~~~~~v~dd~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~ 219 (453) T protein:vir:73 140 YCSPLNVFMVYDDSIKQKPLFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSI 219 (453) T ss_pred EEcccceEEEEeCCCCceeEEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcc Confidence 778888888776542222111222222222221 12334444333210 000 12367787 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChh Q lcl|Aclame:pro 195 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMS 274 (432) Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~ 274 (432) +..+...++....+.-......+..+.|..++.-. ...++....++..-.- .......+.....+.+.+++.+..... T Consensus 220 ~~~v~~liDa~~~~~S~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~ 297 (453) T protein:vir:73 220 FEPVHSLINSYNKVTSEKANDVEYFSDQYLVFLGA-EVDEEDAKNIKDNRLI-NFFDKNSNGQGTNAAKVDVKFLDKPDS 297 (453) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccceeeeecC-CCCchhhhcccccccc-cccccccccccccccCceeEEeeecCC Confidence 87777777766665555555566666676666532 2334443333221110 011111222333445555555554444 Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhccchhh Q lcl|Aclame:pro 275 DAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQATLTMYEQEMTYKLFLDSEL 344 (432) Q Consensus 275 d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~----------~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~ 344 (432) +..+....+...+.|+..-++|..-....++.+...... .....+...+..+++.+..-+... ..... T Consensus 298 ~~~~~~~~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~--~~~~~ 375 (453) T protein:vir:73 298 DVQTENLLNRLERSIFQFTMAANISDENFGNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNA--SNKDA 375 (453) T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCccc Confidence 555667788888889888888764332222222111111 122334444445444443322211 11111 Q ss_pred cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 345 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 345 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) .. .+++.+..-...+..+.++.+.++. |+++..-+.+++++-+.+..+ + ..+..-.+...+......-. T Consensus 376 ~~--~i~v~f~~~~p~~~~~~a~~~~k~~--giis~et~~~~~~~~~d~~~E-~------~ri~~E~~~~~~~~~~~~~~ 444 (453) T protein:vir:73 376 WK--DIEYTFTRNEPKDIKEQAETANILK--GITSEETALSVISVIPDVQAE-M------EKIKKKKLLQLSLTRTSNLV 444 (453) T ss_pred cc--cceEEeCCCCCCCHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHHHH-H------HHHHHHHHHHHHHHHhccCC Confidence 12 3344446666788999999998885 788887788888764322111 0 00000000000011111111 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 425 SKEGNEGN 432 (432) Q Consensus 425 ~~~~~e~~ 432 (432) ..+...|| T Consensus 445 ~~~~~~~~ 452 (453) T protein:vir:73 445 RMKQMRGN 452 (453) T ss_pred cchhhhcC Confidence 12222333 No 214 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=97.77 E-value=2.1e-05 Score=46.23 Aligned_cols=384 Identities=8% Similarity=0.037 Sum_probs=168.8 Q ss_pred Cch----------------------------------------HHHHHHhccccccccccccccCCchHHHHHhhcCCcC Q lcl|Aclame:pro 1 MKI----------------------------------------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPS 40 (432) Q Consensus 1 Mg~----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 40 (432) |.| ++++++.............. ...-+.... T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~--------~~~~~~~~~ 73 (478) T protein:vir:10 2 ISINWPWDKPYHEQVVEQIKPKYETQEEMILRLVREHKENIDNITMGERYYNHHPDILDAPFK--------RDVNGDYDE 73 (478) T ss_pred ccccccCCchhhhHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchh--------hhccccccc Confidence 111 11111111110000000000 000000000 Q ss_pred cccccHHHHhccHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe Q lcl|Aclame:pro 41 TISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 120 (432) Q Consensus 41 ~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~ 120 (432) ..+ ..=+.++....+++..+..+-+-|+.+...+++ ....+...+. | ........++..++.+|.+ T Consensus 74 ~~~---~~ki~~n~~k~ivd~~~~yl~g~p~~~~~~~~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~ 139 (478) T protein:vir:10 74 TKP---DWRMYTNYHQNLVDQKVAYAVANPVTFGVDNDK-----ALKQIQHTLN---H---KWDDKLVDILTAASNKGIE 139 (478) T ss_pred ccc---cceeccchHHHHHHHHhhhhcccCceeecCChH-----HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeE Confidence 000 000124567778888888888888886432221 1112222222 2 3456667788999999999 Q ss_pred EEEEeeCCCCceEEEEEEcCcceEEEEcCcccee-ccceeEEEecccCceEEEccceEEEEecC---------------- Q lcl|Aclame:pro 121 YANIEFDRKGKVQALWPIDASKVTVYIDDVGLLN-SKTKMWYVVNTGGQQRVLKPEEILHFKNG---------------- 183 (432) Q Consensus 121 ~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------- 183 (432) |+.+..+.+|.+ .+..++|..+.++.+...... .....+|..........+.++.|.+++.. T Consensus 140 ~~~v~~d~~~~~-~~~~~~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~ 218 (478) T protein:vir:10 140 WVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERDELQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQ 218 (478) T ss_pred EEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccc Confidence 999988888765 467788888887776421111 11111222111111122333443333210 Q ss_pred ---------CC---------CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 184 ---------IT---------LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFE 245 (432) Q Consensus 184 ---------~~---------~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (432) ++ .+...|.|-+..+...++....+.-...+.++..+.|-.++.-....... .....+. T Consensus 219 ~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~~~~S~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~ 295 (478) T protein:vir:10 219 PHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEGEDMK---DFMHNLK 295 (478) T ss_pred cceecccccccCCcceEEEeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCCccccc---chhhhhh Confidence 00 01235788777777777766665555555555556665555432221111 1111111 Q ss_pred HHhcccccccceeec--CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHHH--------- Q lcl|Aclame:pro 246 SMSSGLQNSHRIALM--PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIEQ--------- 313 (432) Q Consensus 246 ~~~~g~~n~g~~~vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~~--------- 313 (432) . .+++.+ +.|.+++.+........+.+..+...+.|+..-++|...... .++.++..... T Consensus 296 ~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~ 367 (478) T protein:vir:10 296 Y--------YKAISVAGESGSGVDTIKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKA 367 (478) T ss_pred h--------CceeEecCCCCCcceEEeecCCHHHHHHHHHHHHHHHHHHhCCcCcCccccccchHHHHHHHHHHHHHHHH Confidence 1 122222 223333333333445556778888889999999988643322 11112111111 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 314 -QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE 392 (432) Q Consensus 314 -~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~ 392 (432) .....+...+..+++.|...+ ....-... +.+.++.-...+..+.++.+.++ .|+++..-+.++++.-.. T Consensus 368 ~~~~~~~~~~l~~~~~li~~~~-----~~~~d~~~--i~i~f~~~~p~~~~e~~~~~~~~--~g~iS~et~i~~~~~v~d 438 (478) T protein:vir:10 368 NKLKNKTLTALQELLQYIIDFY-----RLDVRVQD--IEITFNFNVMVNELENSQIAMNS--TGLLSKETILGNHSWVQD 438 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCccccc--ceEEeCCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCC Confidence 112333333444333333322 11111222 33444556667888888888776 688988778888865322 Q ss_pred C--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 393 A--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 393 ~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) + ..++. ...-... ........+++.+++ ++..+++ T Consensus 439 ~~~E~~ri--~~E~~~~-~~~~~~~~~~~~d~~--~~~~~d~ 475 (478) T protein:vir:10 439 PVAEMERI--EQENIEL-NQQLPDIEEGLNDEQ--QRQSEDN 475 (478) T ss_pred HHHHHHHH--HHHHHHH-HHhccccCCCCcccc--cccCcCC Confidence 1 11111 0000000 000011111221111 1111111 No 215 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=97.72 E-value=2.5e-05 Score=45.79 Aligned_cols=402 Identities=10% Similarity=0.007 Sum_probs=170.3 Q ss_pred Cc--------------------hHHHHHHhccccccccccccccCCchHHHHHhh-cCCcC-----ccc---ccHHHHhc Q lcl|Aclame:pro 1 MK--------------------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWL-GISPS-----TIS---VKGKNALK 51 (432) Q Consensus 1 Mg--------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-----~~~---v~~~~a~~ 51 (432) |= -.+.+.++...... .-.. .-..+...+ |.... ... .-...-+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~li~~~~~---~~~~---r~~~l~~YY~g~~~~i~~~~~~~~~~~~~~~ki~ 74 (506) T protein:vir:94 1 MDYDLTEHKQANLIYQESLENLTPNKIMKFITHHFN---YQRP---RLEMLDDYYQGYNLKILDKQSRRHEDGKADHRAT 74 (506) T ss_pred CCcchhhhhcceeecccchhcCCHHHHHHHHHHHHH---HHHH---HHHHHHHHhcCCCccccccccccccccCCcceee Confidence 10 00111111000000 0000 000111111 11000 000 00001123 Q ss_pred cHHHHHHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc Q lcl|Aclame:pro 52 VATVFACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK 131 (432) Q Consensus 52 ~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~ 131 (432) .+.....++..+..+-.-|+++...++. ....+..++. . | ........+...++.+|.+|+.+..+.+|. T Consensus 75 ~n~~~~Iv~~~~~~l~G~p~~~~~~d~~-----~~~~l~~~~~-~-N---~~~~~~~~~~~~~~~~G~a~~~v~~ded~~ 144 (506) T protein:vir:94 75 HSFAKYIADFQTSYSVGNPINVKLPDDG-----SNSGFDTFNK-A-N---DVDAENYDLFLDMSRYGRAYEYVYRGEDNE 144 (506) T ss_pred cchHHHHHHHhhhhhcccCceeecCcch-----HHHHHHHHHh-c-c---CHhHHHHHHHHHHHhcCeEEEEEEecCCCe Confidence 4667777888888877777776432221 1122223332 1 2 344566778889999999999999888876 Q ss_pred eEEEEEEcCcceEEEEcCcccee--ccceeEEEecccCc--------eEEEccce------------------------- Q lcl|Aclame:pro 132 VQALWPIDASKVTVYIDDVGLLN--SKTKMWYVVNTGGQ--------QRVLKPEE------------------------- 176 (432) Q Consensus 132 ~~~l~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~------------------------- 176 (432) + .+..++|..+.++.++..... .....+......+. ...+.... T Consensus 145 ~-~i~~~~p~~~~~v~dd~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vP 223 (506) T protein:vir:94 145 E-HLAKLDPLDTFVIYSTDVDPKPIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFP 223 (506) T ss_pred e-EEEEEcccceEEEecCCCCCceEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccc Confidence 5 466788888888876532111 00000000000000 00011111 Q ss_pred EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC---------------------CCHH Q lcl|Aclame:pro 177 ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD---------------------LNED 235 (432) Q Consensus 177 vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---------------------~~~~ 235 (432) |+++++ ...|.|.+......++....+.-...+..+....|-.+++-... ...+ T Consensus 224 vv~~~n-----~~~~~sd~e~~~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (506) T protein:vir:94 224 VVEFKN-----SNFRLGDFENVLPLIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAK 298 (506) T ss_pred eEEecC-----CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhcccccccccccccccccc Confidence 333332 12456666655555554444333332222222222222211000 0011 Q ss_pred HHHHHHHHHHHH-hcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHH- Q lcl|Aclame:pro 236 AKKVFRENFESM-SSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIE- 312 (432) Q Consensus 236 ~~~~~~~~~~~~-~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~- 312 (432) ......+.+... .-.....+.+...+.+.+++-+..+.....+....+.....|+..-++|..-... .++.++.... T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Aik~ 378 (506) T protein:vir:94 299 DKLELIKEMKDANMLLLKSGMTVNGTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFASNSSGVAMQY 378 (506) T ss_pred chhHHHhhhhhcCeeeecccccccCccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCccccccccccccchHHHHHH Confidence 111111111111 1111111222223344556556655566667788889999999999998743321 1222211111 Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 313 ---------QQQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEA 383 (432) Q Consensus 313 ---------~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~ 383 (432) .....++...+...++.|...+... ....-.....+.+.+..-...|..+.++.+.++ .|+++...+ T Consensus 379 ~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~--~~~~~~d~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~ 454 (506) T protein:vir:94 379 KVLGTVELASTKRRMFERGLYARYQIISDIENSI--HGDWTFDPQELTFTFRDNLPADNISQIKALVQA--GATLPQKYL 454 (506) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCChHHH Confidence 1234445555656555555544321 100000112344445666778889999988887 589999999 Q ss_pred HHHhCCCCCC--CcceeeeccccccccccccccCCC-CCCCCCCCCCCCCCC Q lcl|Aclame:pro 384 RSKEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKG-GDTNGEVSKEGNEGN 432 (432) Q Consensus 384 R~~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~g-g~~~~~~~~~~~e~~ 432 (432) ++++++-+.| ..+++. +.-... .......+ ....++.+...++.| T Consensus 455 ~~~lp~v~d~~~E~~ri~--~E~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 502 (506) T protein:vir:94 455 YQQLPGVTNPQDIVDMMK--EQSANG--DYSFDQNGVISNDGQTNTTATQTD 502 (506) T ss_pred HHhCCCCCCHHHHHHHHH--HHHHHH--hhcchhhcCCCcccCccccccccc Confidence 9998654322 111111 000000 00001111 111122222333333 No 216 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=97.60 E-value=3.9e-05 Score=44.78 Aligned_cols=384 Identities=10% Similarity=-0.000 Sum_probs=169.6 Q ss_pred Cch--------------------HHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MKI--------------------VDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIK 60 (432) Q Consensus 1 Mg~--------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~ 60 (432) |-+ ..+++........-....... .....................=+.++....+++ T Consensus 1 ~~~e~~~~~i~~~~~~~~~~~~~~~~~~~Yy~g~hdi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd 77 (471) T protein:vir:10 1 MEIEVIKKIISSQMVKHGKFVSQAAEAEKYYRNENDIKRKRKPA---DKKGAENEAKAEDNAFRNADNRISHNWHQLLLD 77 (471) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccchh---hhhcccccccccccccccccceeccchhHHHHH Confidence 221 111111111110000000000 000000000000000000001123455666777 Q ss_pred HHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC-CCceEEEEEEc Q lcl|Aclame:pro 61 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR-KGKVQALWPID 139 (432) Q Consensus 61 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~-~g~~~~l~~~~ 139 (432) ..+..+-+-|+.+...+++. . .....+. . | ........+...++.+|.+|..+..+. +|. ..+..++ T Consensus 78 ~~~~yl~G~p~~~~~~~~~~-----~-~~l~~~~-~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~-~~~~~~~ 145 (471) T protein:vir:10 78 QKKAYALTYPPTFDVDDKKV-----N-DMIVDVL-G-D---DYERISKQLCVNAGNAGIAWLHVWKDASDNS-FRYACVD 145 (471) T ss_pred hhhhhhcccCceeccCChHH-----H-HHHHHHH-h-c---CHHHHHHHHHHHHhhCCeEEEEEEeeCCCCe-eEEEEEc Confidence 77777777887764322111 1 1112121 1 2 234456677889999999999998875 464 4577789 Q ss_pred CcceEEEEcCccceecc-ceeEEEec--ccCce----EEEccceEEEEecC----------------------------- Q lcl|Aclame:pro 140 ASKVTVYIDDVGLLNSK-TKMWYVVN--TGGQQ----RVLKPEEILHFKNG----------------------------- 183 (432) Q Consensus 140 ~~~v~~~~~~~~~~~~~-~~~~~~~~--~~~~~----~~~~~~~vih~~~~----------------------------- 183 (432) |..+-++.+........ ...+|... .++.. ..+..+.+.|++.. T Consensus 146 p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471) T protein:vir:10 146 SKEVIPIYSKSLDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNS 225 (471) T ss_pred ccceEEEEcCCCCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCccccccccccccccccccccccccccc Confidence 99888877654221111 11111111 11111 11233333333210 Q ss_pred --CCC---------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 184 --ITL---------DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQ 252 (432) Q Consensus 184 --~~~---------~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 252 (432) ++. +...|.|-+......++....+.-...+.+...+.|-.++.-......++ ....+.. T Consensus 226 ~~~~~g~iPvv~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~---~~~~~~~------ 296 (471) T protein:vir:10 226 FKHDFGLVPFIPFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQDKQE---FLEDLKR------ 296 (471) T ss_pred ccCCCCceeEEEeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccch---hHHHhhc------ Confidence 000 12347777877777777766665555555666666655555432221111 1111111 Q ss_pred cccceeec-------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH----------HH Q lcl|Aclame:pro 253 NSHRIALM-------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQ 315 (432) Q Consensus 253 n~g~~~vl-------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~----------~~ 315 (432) ++.+.+ .++++|..... ....+....+...+.|+..-++|..-....++.++..... .. T Consensus 297 --~~~i~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~~~I~~~s~tp~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~ 372 (471) T protein:vir:10 297 --YKMIKMDNDGMGDQSGVTTIAIDI--PTEARNLILERTKKQIFISGQGVNPETDKLGNSSGVALKFLYSLLELKAGNM 372 (471) T ss_pred --CCeEEecCCCCccCccceEEeecC--ChHHHHHHHHHHHHHHHHHhCCcCCCcccccCccHHHHHHHHHHHHHHHHHH Confidence 112222 12445554443 3344567788888889999888865433222222211211 22 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC-- Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA-- 393 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~-- 393 (432) +..+...+..+++.|...+. ..+ ...+.+.+...+..|..+.++.+.++ .|+++..-+.++++.-..+ T Consensus 373 ~~~~~~~l~~~~~li~~~~~-----~~d---~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~v~D~~~ 442 (471) T protein:vir:10 373 ETQFRSGYATLVKMILKHLG-----LSD---KLKIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSNPIVEDWQD 442 (471) T ss_pred HHHHHHHHHHHHHHHHHHhc-----cCC---CceeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHH Confidence 33333344444444433322 111 12345555777788999999998887 5889988888887653321 Q ss_pred CcceeeeccccccccccccccCCCCCCCCCCC Q lcl|Aclame:pro 394 GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 394 ~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~ 425 (432) ..+++..- .-...+ ..+...+.+.+++.+ T Consensus 443 E~eri~~E-~~~~~~--~~~~~~~~~~~~e~~ 471 (471) T protein:vir:10 443 ELRLQKAE-QEGRSE--KLYDMEEVEHESEVE 471 (471) T ss_pred HHHHHHHH-HHHHHh--cccccCCCCCccccC Confidence 11111000 000000 001112222222222 No 217 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=97.21 E-value=0.00013 Score=41.91 Aligned_cols=403 Identities=11% Similarity=0.054 Sum_probs=165.5 Q ss_pred CchH-HHHHHhccccccccccccccCCchHHHHHhhcCCcCcc----ccc---HHHHhccHHHHHHHHHHHHhhccCceE Q lcl|Aclame:pro 1 MKIV-DSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTI----SVK---GKNALKVATVFACIKILSESVSKLPLK 72 (432) Q Consensus 1 Mg~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~v~---~~~a~~~~~v~~~i~~ia~~ia~~~~~ 72 (432) |.+- +.++++....... .. . .-..+..++-...... ... ...=+..+....+|+..+..+-.-|+. T Consensus 13 ~~~~~~~~~~~i~~~~~~--~~-~---r~~~~~~yy~g~~~i~~~~~~~~~~~~~~ki~~n~~~~iv~~~~~~l~g~~~~ 86 (489) T protein:vir:99 13 SKLWIDQLKNYISRFKAE--QL-E---RLKELKRYYLGDNNIKYRPAKTDKYAADNRIASDFAKYITVFEQGYMLGVPVE 86 (489) T ss_pred CCCCHHHHHHHHHHHHHH--HH-H---HHHHHHHHhcccCccccccccccccCCcceeecchHHHHHHHHhhhhccCCce Confidence 3321 1122211100000 00 0 0001111110000000 000 000023456677788888877777777 Q ss_pred EEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEee----CCCCceEEEEEEcCcceEEEEc Q lcl|Aclame:pro 73 IYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEF----DRKGKVQALWPIDASKVTVYID 148 (432) Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~----~~~g~~~~l~~~~~~~v~~~~~ 148 (432) +...+++ ....+..++. . | ....+...+..+++.+|.+|..+.. +..| ...+..++|..+.++.+ T Consensus 87 ~~~~d~~-----~~~~l~~~~~-~-n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~-~~~i~~~~p~~~~~v~d 155 (489) T protein:vir:99 87 YKNENKD-----LQAAIDLMSV-R-N---NEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKT-EVKLYQLPAEQTFVIYD 155 (489) T ss_pred eecCChh-----HHHHHHHHHh-h-c---ChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCc-ceEEEEEcccceEEEEc Confidence 5432221 1112223332 1 2 3345677889999999999987654 2333 34577788888888776 Q ss_pred Cccce-eccceeEEEe-cccCc----eEEEccce----------------------------EEEEecCCCCCcccccCH Q lcl|Aclame:pro 149 DVGLL-NSKTKMWYVV-NTGGQ----QRVLKPEE----------------------------ILHFKNGITLDGLVGVPT 194 (432) Q Consensus 149 ~~~~~-~~~~~~~~~~-~~~~~----~~~~~~~~----------------------------vih~~~~~~~~~~~G~s~ 194 (432) +.... ......+|.. ...+. ...+.++. |+|+++ ...|.|. T Consensus 156 d~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~~~s~ 230 (489) T protein:vir:99 156 DTYQRNSLMAVHFYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYAN-----NEERTGA 230 (489) T ss_pred CCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeec-----CCCCCCc Confidence 43211 1111111111 11111 11122333 333332 1246666 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHh------cccccccceeecCCC----- Q lcl|Aclame:pro 195 MEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMS------SGLQNSHRIALMPVG----- 263 (432) Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~n~g~~~vl~~g----- 263 (432) +..+...++....+...........+.+-.++.-.. ...+........+.... ......++++.++.+ T Consensus 231 ~~~v~~liDa~d~~~s~~~~~~~~~~~~~l~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (489) T protein:vir:99 231 YESVLDNIDAYDLSQSELANFQQDSVNALLVIAGNA-YTGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPNG 309 (489) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC-cccccchhhhhhcccccccccccccccccceeeeeccccCccc Confidence 666655555554444333333333334433332211 11111111111111110 011112333443332 Q ss_pred --ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhc-cCccccccccHH----------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 264 --YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQL-NDLSKATLNNIE----------QQQQQFYTDTLQATLTMY 330 (432) Q Consensus 264 --~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l-~~~~~~~~~~~~----------~~~~~~~~~~l~P~~~~i 330 (432) .+.+.+........+....+...+.|...-++|..-. ...++.++.... +.....+...+..+++.+ T Consensus 310 ~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li 389 (489) T protein:vir:99 310 VKPQAYFLKKEYDTAGSEAYKNRLVADILRFTFTPDTQDMKFSGVQSGESMKYKLMASDNYREKQERLFKKGLMRRLRLA 389 (489) T ss_pred cccceeeeeecCChHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2333333333344455677788899999999886432 222222211111 122334444555555555 Q ss_pred HHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC----Ccceeeecccccc Q lcl|Aclame:pro 331 EQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA----GGDRLLVNGNMLP 406 (432) Q Consensus 331 ~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~----~gd~~~~~~n~~~ 406 (432) ...+...-...........+.+.++.-...|..+.++.+.++. |+++...+.++++.=..+ ..+++. ..-.. T Consensus 390 ~~~~~~~~~~~~~~~~~~~i~v~f~~~~p~d~~~~~~~~~kl~--giis~et~~~~l~~v~~~d~~~E~~ri~--~E~~~ 465 (489) T protein:vir:99 390 ANIWAIKGNEATTYSLVNDTSIVFTPNLPQNDNEIVTAAQNLY--GIVSDQTIFEILNTVTGVDAEAELKRLK--EEADK 465 (489) T ss_pred HHHHhhcCCccccccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhcCCCCchhHHHHHHHHH--HHHHH Confidence 4443221100000000012344445556778888899888874 889998888887441111 111110 00000 Q ss_pred ccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 407 IDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 407 ~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) .... .+...+|+.+++.+...++. T Consensus 466 ~~~~-~~~~~~~~~~~~~~~~~~~p 489 (489) T protein:vir:99 466 KQSL-PEPRLVGDASGQEEPTAEKP 489 (489) T ss_pred Hhcc-ccccccCCCCCCcCCCCCCC Confidence 0000 11122333333333333333 No 218 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=97.11 E-value=0.00017 Score=41.29 Aligned_cols=381 Identities=10% Similarity=0.051 Sum_probs=164.6 Q ss_pred CchH-----------HHHHHhccccccccccccccCCchHHHHHhhcCCc-------------CcccccHHHHhccHHHH Q lcl|Aclame:pro 1 MKIV-----------DSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP-------------STISVKGKNALKVATVF 56 (432) Q Consensus 1 Mg~~-----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-------------~~~~v~~~~a~~~~~v~ 56 (432) +..| +.|.+........ . ..-..+....-+.. .........=+.++... T Consensus 14 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~---~----~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~ 86 (468) T protein:vir:96 14 ERVVEQIKPQYETQEEMILRLITKHKEN---V----EDITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQ 86 (468) T ss_pred hheeecccccccCcHHHHHHHHHHHHHH---H----HHHHHHHHHhcCCCccccccccccccccccccccccccccchHH Confidence 0000 0111110000000 0 00000000000000 00000000012245566 Q ss_pred HHHHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEE Q lcl|Aclame:pro 57 ACIKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALW 136 (432) Q Consensus 57 ~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~ 136 (432) .+++..+..+-+-|+.+...+++ ....+...+. | +.......++.+++.+|.+|+.+..+.+|.+ .+. T Consensus 87 ~Iv~~~~~~l~g~p~~~~~~d~~-----~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~ 154 (468) T protein:vir:96 87 NLVDQKVAYAVANPVTYGTEDEK-----SLKTIQEVLN---H---KWDDKLVDILTAASNKGVEWIQPYVDEQGEF-KTF 154 (468) T ss_pred HHHHHHHhhhccCCceeccCChH-----HHHHHHHHHh---c---CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEE Confidence 67777777777777776432211 1123333332 2 3345667788999999999999888887764 467 Q ss_pred EEcCcceEEEEcCccceec-cceeEEEecccCceEEEccceEEEEecC-------------------------CC----- Q lcl|Aclame:pro 137 PIDASKVTVYIDDVGLLNS-KTKMWYVVNTGGQQRVLKPEEILHFKNG-------------------------IT----- 185 (432) Q Consensus 137 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vih~~~~-------------------------~~----- 185 (432) .++|..+.++.+....... ....+|..........+.++.+.+++.. ++ T Consensus 155 ~~~p~~~~~v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP 234 (468) T protein:vir:96 155 RVPAEQAIPIWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVP 234 (468) T ss_pred EEcccceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCccc Confidence 7888888777654321111 1111111111111122233333322210 00 Q ss_pred ----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccceeecC Q lcl|Aclame:pro 186 ----LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMP 261 (432) Q Consensus 186 ----~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~ 261 (432) .+...|.|-+..+...++....+.-...+.++..+.|-.+++--.....+. ....+. .++++.++ T Consensus 235 vv~~~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~~~---~~~~~~--------~~~~i~~~ 303 (468) T protein:vir:96 235 FIPFKNNPQEVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYEGEDLEE---FMYNLK--------YYKAINVD 303 (468) T ss_pred EEEecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccccch---hhhhhh--------cCceEEec Confidence 012457887777777777766666655566666667766655322211111 111111 12333332 Q ss_pred --CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccC-ccccccccHH----------HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 262 --VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLND-LSKATLNNIE----------QQQQQFYTDTLQATLT 328 (432) Q Consensus 262 --~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~-~~~~~~~~~~----------~~~~~~~~~~l~P~~~ 328 (432) ++.+++.+........+....+...+.|+..-++|...... .++.++.... ......+...++.+++ T Consensus 304 ~d~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~ 383 (468) T protein:vir:96 304 GDGSGGVDTIQIDVPVQSAKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQ 383 (468) T ss_pred CCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 33333333333334445677888888999998987643221 1111111111 1122333333333333 Q ss_pred HHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--Ccceeeecccccc Q lcl|Aclame:pro 329 MYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEA--GGDRLLVNGNMLP 406 (432) Q Consensus 329 ~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~--~gd~~~~~~n~~~ 406 (432) .|...+ ....-...+.+.| +.-...|..+.++. +.++|+++...++++++.-..+ ..++. ...-. T Consensus 384 li~~~~-----g~~~d~~~i~i~f--~~~~p~d~~e~a~~---~~~~g~iS~et~i~~l~~v~D~~~E~~ri--~~E~~- 450 (468) T protein:vir:96 384 YIIDFY-----KLSIKVQDVEITF--NFNVMVNELEQSQI---GVNSQYLSKETVVTNHPWVDDPVAEMERI--DQEEL- 450 (468) T ss_pred HHHHHh-----CCCcccceeeEEe--cCCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHH--HHHHH- Confidence 333222 1111112233444 44445566555554 4567999998898887553221 11111 00000 Q ss_pred ccccccccCCCCCCCCCCC Q lcl|Aclame:pro 407 IDMAGQAYLKGGDTNGEVS 425 (432) Q Consensus 407 ~~~~~~~~~~gg~~~~~~~ 425 (432) ......+.-+|..+.+++ T Consensus 451 -~~~~~~~~~~~~~~~~~~ 468 (468) T protein:vir:96 451 -ALPSIEEGLNGKENNEPT 468 (468) T ss_pred -HHHHHhhccCCCCCCCCC Confidence 000111222333333333 No 219 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=96.86 E-value=0.00029 Score=39.97 Aligned_cols=411 Identities=10% Similarity=0.054 Sum_probs=177.7 Q ss_pred CchHHHHH--Hhccccc----------cccccccccCCchHHH-------HHhhcCC---cCcc----------cccHHH Q lcl|Aclame:pro 1 MKIVDSVK--KFFNFEK----------RQTSQVIELNKDDEKL-------LEWLGIS---PSTI----------SVKGKN 48 (432) Q Consensus 1 Mg~~~~l~--~~~~~~~----------~~~~~~~~~~~~~~~~-------~~~~g~~---~~~~----------~v~~~~ 48 (432) |||++.|+ ++|...- +..+.+.+....+... ..+.|.. .... --.++. T Consensus 4 ~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~YR~ 83 (524) T protein:vir:98 4 LGFGNVLSFFKNFAREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINTYRG 83 (524) T ss_pred cchhhHHHHhhhhhhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHHHHH Confidence 66666442 2222110 1111111111111100 0011110 0000 012456 Q ss_pred HhccHHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe Q lcl|Aclame:pro 49 ALKVATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 120 (432) Q Consensus 49 a~~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~ 120 (432) .+.+|.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|.. T Consensus 84 ma~~pEvd~Av~eIVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi 158 (524) T protein:vir:98 84 IMSYPEVENAVSEIIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVLN-IYDFDNMGAR----LFRDWYVDSRI 158 (524) T ss_pred HhhccchhhHHHhhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhccee Confidence 6789999999999998763 223333221111 000001111122222 2344445555 56667778999 Q ss_pred EEEEeeCCCCc--eEEEEEEcCcceEEEE-------cCccceeccceeEEEec-------------ccCceEEEccceEE Q lcl|Aclame:pro 121 YANIEFDRKGK--VQALWPIDASKVTVYI-------DDVGLLNSKTKMWYVVN-------------TGGQQRVLKPEEIL 178 (432) Q Consensus 121 ~~~~~~~~~g~--~~~l~~~~~~~v~~~~-------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~vi 178 (432) |..++.+.... +.+|..++|..++.++ +...........++.|. ..+....++.+.|+ T Consensus 159 ~fhkiid~~~~kGI~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIv 238 (524) T protein:vir:98 159 YFHKIMHKDESKGIRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIV 238 (524) T ss_pred EEEEEEcCCCCcceeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhhee Confidence 99988654332 8999999999998775 21111111122222222 11234668888999 Q ss_pred EEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhc-------- Q lcl|Aclame:pro 179 HFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSS-------- 249 (432) Q Consensus 179 h~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------- 249 (432) |...+.......-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+. T Consensus 239 y~hSGL~d~~~~iisyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~ 318 (524) T protein:vir:98 239 YAHSGLEDCSNNIIGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDAR 318 (524) T ss_pred eeccCcccCCCCeeeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecc Confidence 98755333222124667777666666655555544443334444555555543 334445554444444443 Q ss_pred -c-cccccceee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc-ccccccHHH-- Q lcl|Aclame:pro 250 -G-LQNSHRIAL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQ-- 313 (432) Q Consensus 250 -g-~~n~g~~~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~-~~~~~~~~~-- 313 (432) | ..+..+.+. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+ ..+.....+ T Consensus 319 TGevrddrk~msMlEDyWLpRReGgrgTEItTLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EIt 397 (524) T protein:vir:98 319 TGTVKNQQNNLSMTEDYWLMRRDGKAITEVSTLPGG-QNFSDMDDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGGGEIT 397 (524) T ss_pred CceeeccccccchhhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCceeccCCCCccccccccchh Confidence 1 111112211 1 246777777532 2222345566888999999999999996332 222211122 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhh----hhhh-HHHHHHHHHHHHh-- Q lcl|Aclame:pro 314 ----QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRAD-IKTRYEAYRTGIQ-- 374 (432) Q Consensus 314 ----~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~d-~~~~~~~~~~~~~-- 374 (432) -+..|+...=.-+...+.+.|.+.|+.+.-.... +++.|..+.. .... +..|+..+..+-. T Consensus 398 RDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyv 477 (524) T protein:vir:98 398 RDELKFSKFIRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQVEGVV 477 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhcccc Confidence 1222332222234444444444444332221111 2222322221 1111 1223333333211 Q ss_pred CCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 375 GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 375 ~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) .-+++.+=||+ .|.+...+ ..++.. .. ..+.| --+ +-++.++| T Consensus 478 Gky~s~dyi~k~ILr~tDeei~~~~k~I--------~~----E~k~~--~~~-~p~~e~~~ 523 (524) T protein:vir:98 478 GKYVSHKYIMKEILRMSDEDIDEQAKLI--------EE----ESKEE--RFK-NPEAEEEN 523 (524) T ss_pred ccccchHHHHHHHhccCHHHHHHHHHHH--------HH----HHhCC--CCc-CCcccccc Confidence 23566666654 34543321 111100 00 00000 000 00111122 No 220 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=96.35 E-value=0.00072 Score=37.83 Aligned_cols=403 Identities=11% Similarity=0.023 Sum_probs=180.7 Q ss_pred CchHHHHHHhccccccccccccccCCchHH--------------HHHhh-----cCCcCcccc-cHHHH-hccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEK--------------LLEWL-----GISPSTISV-KGKNA-LKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-----g~~~~~~~v-~~~~a-~~~~~v~~~i 59 (432) |+-= +++-..+.++...+.. .+..+ +....-..+ ....+ .+-+.+.-+. T Consensus 1 ~~~~----------~~~~~~~~~~~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~ 70 (527) T protein:vir:10 1 MGQD----------KRQYGSTQQLRAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNG 70 (527) T ss_pred CCcc----------ccccCCCcCcCCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhh Confidence 5432 1111111111111000 00000 000000000 00000 0001111111 Q ss_pred HHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC---CCceEEEE Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALW 136 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~ 136 (432) ..+-.. ...|.+. +.+.........+..+|+. --...++...++..-.+.++.|.+...+.++. .|+...+. T Consensus 71 ~~~~~~--~~~~~~~--g~~~~~~~~~e~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~ 145 (527) T protein:vir:10 71 EKLIEA--KMRFLGQ--GLKWEFSKKDAKVDDAIKV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLH 145 (527) T ss_pred HHhhCC--cceeecc--CccccccchhHHHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEe Confidence 111110 1111111 1100000001112222221 11224556677788888999999999998873 45677888 Q ss_pred EEcCcceEEEEcCccceeccceeEE-----------------------Eecc------cCceE----------------- Q lcl|Aclame:pro 137 PIDASKVTVYIDDVGLLNSKTKMWY-----------------------VVNT------GGQQR----------------- 170 (432) Q Consensus 137 ~~~~~~v~~~~~~~~~~~~~~~~~~-----------------------~~~~------~~~~~----------------- 170 (432) .++|..+-.+.|.++.......+.. .... .|... T Consensus 146 ~~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~ 225 (527) T protein:vir:10 146 EVDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPES 225 (527) T ss_pred ecCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeecccccccccc Confidence 8887776666554322111111000 0000 00000 Q ss_pred ---------------------EEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 171 ---------------------VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 171 ---------------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) .++.=-|+|+++-++.+...|.|-++-+...++.......-.....+-+|.|-.+++.- T Consensus 226 p~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~ 305 (527) T protein:vir:10 226 PLEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSA 305 (527) T ss_pred ccchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccc Confidence 01111278888778888899999888666665555444433444444455554444222 Q ss_pred CCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccc Q lcl|Aclame:pro 230 GDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLN 309 (432) Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~ 309 (432) ... +.+ -+... +. -.-|.++-++++.++..++..+.-..+....+...+.|+..-++|.+-+|..+.++- T Consensus 306 ~~v---d~~---G~~~~-~~--VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~- 375 (527) T protein:vir:10 306 PPR---DSR---GNMVP-WT--ISPLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAVA- 375 (527) T ss_pred ccc---ccc---CCcCc-cc--cCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcC- Confidence 211 100 00000 00 012455668899999988876655557777889999999999999999986554431 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH----------HHH----hh------ccchhhcchhhhhhhhhhhhhhhHHHHHHHH Q lcl|Aclame:pro 310 NIEQQQQQFYTDTLQATLTMYEQE----------MTY----KL------FLDSELDKGFYSKFNVDAILRADIKTRYEAY 369 (432) Q Consensus 310 ~~~~~~~~~~~~~l~P~~~~i~~~----------l~~----~l------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 369 (432) ..... +.-.+.|++...... +.+ -+ +.-........+...+...+..|.++..+.. T Consensus 376 -~SG~A---LeL~L~PLlar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v 451 (527) T protein:vir:10 376 -ESGIA---LDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQL 451 (527) T ss_pred -cHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHH Confidence 11111 122233433322211 000 00 0000111111234455777899999999999 Q ss_pred HHHHhCCCcCHHHHHHHh---CCCCCCCcc--eee---eccccccccccccccCC-CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 370 RTGIQGGFLKPNEARSKE---DLPPEAGGD--RLL---VNGNMLPIDMAGQAYLK-GGDTNGEVSKEGNEGN 432 (432) Q Consensus 370 ~~~~~~g~~t~nE~R~~~---gl~p~~~gd--~~~---~~~n~~~~~~~~~~~~~-gg~~~~~~~~~~~e~~ 432 (432) .+++.+|+++.-=+-++| |.-..++.+ +.. ......-++..+..... +++......+..+.+| T Consensus 452 ~tL~~aGi~S~~tAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~A~~~~~a~~~~~~g~~~~~~d~~~~ 523 (527) T protein:vir:10 452 LQLWEAGLIPAKKLTEELSKIMGFELTEEDFKQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQALN 523 (527) T ss_pred HHHHHcCchhHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccccC Confidence 999999999999887877 322222222 110 00011122222222222 3333333334444455 No 221 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=96.28 E-value=0.00078 Score=37.61 Aligned_cols=403 Identities=11% Similarity=0.024 Sum_probs=180.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHH--------------HHHhh-----cCCcCcccc-cHHHH-hccHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEK--------------LLEWL-----GISPSTISV-KGKNA-LKVATVFACI 59 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-----g~~~~~~~v-~~~~a-~~~~~v~~~i 59 (432) |+-= +++-..+.++...+.. .+..+ +....-..+ ....+ .+-+.+.-+. T Consensus 1 ~~~~----------~~~~~~~~~~~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~ 70 (527) T protein:vir:10 1 MGQD----------KRQYGSTQQLRAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNG 70 (527) T ss_pred CCcc----------ccccCCCcCcCCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhh Confidence 5432 1111111111111000 00000 000000000 00000 0001111111 Q ss_pred HHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC---CCceEEEE Q lcl|Aclame:pro 60 KILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALW 136 (432) Q Consensus 60 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~ 136 (432) ..+-.. ...|.+. +.+.........+..+|+. --...++...++..-.+.++.|.+...+.++. .|+...+. T Consensus 71 ~~~~~~--~~~~~~~--g~~~~~~~~~e~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~ 145 (527) T protein:vir:10 71 EKLIEA--KMRFLGQ--GLKWEFSKKDAKVDDAIRV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLH 145 (527) T ss_pred HHhhCC--cceeecc--CccccccchhHHHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEe Confidence 111110 1111111 1100000001112222321 11224556677788888999999999998873 45677888 Q ss_pred EEcCcceEEEEcCccceeccceeEE-----------------------Eecc------cCceE----------------- Q lcl|Aclame:pro 137 PIDASKVTVYIDDVGLLNSKTKMWY-----------------------VVNT------GGQQR----------------- 170 (432) Q Consensus 137 ~~~~~~v~~~~~~~~~~~~~~~~~~-----------------------~~~~------~~~~~----------------- 170 (432) .++|..+-.+.|.++.......+.. .... .|... T Consensus 146 ~~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~ 225 (527) T protein:vir:10 146 EVDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPES 225 (527) T ss_pred ecCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeecccccccccc Confidence 8887776666554322111111000 0000 00000 Q ss_pred ---------------------EEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeC Q lcl|Aclame:pro 171 ---------------------VLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYV 229 (432) Q Consensus 171 ---------------------~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 229 (432) .++.=-|+|+++-++.+...|.|-++-+...++.......-.....+-+|.|-.+++.- T Consensus 226 p~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~ 305 (527) T protein:vir:10 226 PLEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSA 305 (527) T ss_pred ccchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccc Confidence 01111278888778888899999888666665555444433444444455554444222 Q ss_pred CCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccc Q lcl|Aclame:pro 230 GDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLN 309 (432) Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~ 309 (432) ... +.+ -+... +. -.-|.++-++++.++..++..+.-..+....+...+.|+..-++|.+-+|..+.++- T Consensus 306 ~~v---d~~---G~~~~-~~--VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~- 375 (527) T protein:vir:10 306 PPR---DSR---GNMVP-WT--ISPLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAVA- 375 (527) T ss_pred ccc---ccc---CCcCc-cc--cCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcC- Confidence 211 100 00000 00 012455668899999988876655557777889999999999999999986554431 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH----------HHH----hh------ccchhhcchhhhhhhhhhhhhhhHHHHHHHH Q lcl|Aclame:pro 310 NIEQQQQQFYTDTLQATLTMYEQE----------MTY----KL------FLDSELDKGFYSKFNVDAILRADIKTRYEAY 369 (432) Q Consensus 310 ~~~~~~~~~~~~~l~P~~~~i~~~----------l~~----~l------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~ 369 (432) ..... +.-.+.|++...... +.+ -+ +.-........+...+...+..|.++..+.. T Consensus 376 -~SG~A---LeL~L~PLlar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v 451 (527) T protein:vir:10 376 -ESGIA---LDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQL 451 (527) T ss_pred -cHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHH Confidence 11111 122233433322211 000 00 0000111111234455777889999999999 Q ss_pred HHHHhCCCcCHHHHHHHh---CCCCCCCcc--eee---eccccccccccccccCC-CCCCCCCCCCCCCCCC Q lcl|Aclame:pro 370 RTGIQGGFLKPNEARSKE---DLPPEAGGD--RLL---VNGNMLPIDMAGQAYLK-GGDTNGEVSKEGNEGN 432 (432) Q Consensus 370 ~~~~~~g~~t~nE~R~~~---gl~p~~~gd--~~~---~~~n~~~~~~~~~~~~~-gg~~~~~~~~~~~e~~ 432 (432) .+++.+|+++.-=+-++| |.-..++.+ +.. ......-++..+..... +++......+..+.+| T Consensus 452 ~tL~~aGiiS~etAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~a~~~~~a~~~~~~g~~~~~~d~~~~ 523 (527) T protein:vir:10 452 LELWEAGLIPAKKLTEELSKIMGFELTEEDFRQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQALN 523 (527) T ss_pred HHHHHcCchhHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccccC Confidence 999999999999887777 332222222 110 00011122222222222 3333333334444455 No 222 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=95.86 E-value=0.0013 Score=36.32 Aligned_cols=414 Identities=12% Similarity=0.127 Sum_probs=170.8 Q ss_pred CchHHHHHHhccccccc----cccccccCCchHH--HH-HhhcCCcCcc---------cccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQ----TSQVIELNKDDEK--LL-EWLGISPSTI---------SVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~----~~~~~~~~~~~~~--~~-~~~g~~~~~~---------~v~~~~a~~~~~v~~~i~~ia~ 64 (432) |. ..|.++.-.+.+. .+...+.+..... .. ..+|...+.. --+++..+.+|.|.+||+.|.+ T Consensus 1 ~~--~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVn 78 (537) T protein:vir:10 1 MA--QQLFGFSLQRAKKVPKGPSFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYREMVLNPECDSAVDDVVN 78 (537) T ss_pred Cc--cccccceeecccccccCCcccCCCcccccceeecccccccccccccccchHHHHHHHHHHHhhccchhhHHHHhhc Confidence 32 2222221111111 1111111111110 01 1112111000 0124666789999999999998 Q ss_pred hhc-----cCceEEEeecCCcc---eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---CceE Q lcl|Aclame:pro 65 SVS-----KLPLKIYQEDEYGI---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKVQ 133 (432) Q Consensus 65 ~ia-----~~~~~~~~~~~~~~---~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---g~~~ 133 (432) .+. .-|+.+.-.+-+.. +.........+|+ --+....+++ +++.|.+.|..|..++.+.. .-+. T Consensus 79 eaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~-ll~F~~~~~e----~fR~WYVDgRi~fhKiid~k~pk~GI~ 153 (537) T protein:vir:10 79 ETICGNFDDVPISIDLHNLKQSEKIKKLIRSEFDEILR-LLDFDNRAYE----IFRRWYVDGRLFFHKVIDPKKPRQGLV 153 (537) T ss_pred ceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeeeEEEEEEEEeCCCccccce Confidence 763 23333332221111 0001111222222 2344444555 56667778999998876533 2488 Q ss_pred EEEEEcCcceEEEEcC-----ccce--------eccceeEEEecc------cCceEEEccceEEEEecC-CCCCcccccC Q lcl|Aclame:pro 134 ALWPIDASKVTVYIDD-----VGLL--------NSKTKMWYVVNT------GGQQRVLKPEEILHFKNG-ITLDGLVGVP 193 (432) Q Consensus 134 ~l~~~~~~~v~~~~~~-----~~~~--------~~~~~~~~~~~~------~~~~~~~~~~~vih~~~~-~~~~~~~G~s 193 (432) +|..++|..++.++.- .... ......|+.+.. .+....++.+-|.+...+ -..+..+.+| T Consensus 154 ELr~lDPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~n~~~i~s 233 (537) T protein:vir:10 154 ELRYVDPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSIAYCHSGIQDLNKNMVLS 233 (537) T ss_pred eeeeeCCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhheeeecccceeCCCCeeee Confidence 9999999999776541 1111 011122233332 233455666555444422 2223455677 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccce------ee-c- Q lcl|Aclame:pro 194 TMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHRI------AL-M- 260 (432) Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~~------~v-l- 260 (432) -+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ...+|.+ +. + T Consensus 234 yLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlE 313 (537) T protein:vir:10 234 HLHKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLE 313 (537) T ss_pred eehhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhh Confidence 77777777776666666554443344444555555543 3333344444444333321 0112221 11 1 Q ss_pred ---------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH------HHHHHHHHHH Q lcl|Aclame:pro 261 ---------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ------QQFYTDTLQA 325 (432) Q Consensus 261 ---------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~------~~~~~~~l~P 325 (432) ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+..+.....+-. ..|+...=.- T Consensus 314 DyWLPRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~r 392 (537) T protein:vir:10 314 DFWLPRREGGRGTEISTLPGG-QNLGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQKFIARLRKR 392 (537) T ss_pred hhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHH Confidence 246777777532 223334556788899999999999999654443333332222 2222222222 Q ss_pred HHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHH--hCCCcCHHHHHHH-hCC Q lcl|Aclame:pro 326 TLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGI--QGGFLKPNEARSK-EDL 389 (432) Q Consensus 326 ~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~--~~g~~t~nE~R~~-~gl 389 (432) +...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+- -.-+++.+=||+. |.+ T Consensus 393 Fs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~ 472 (537) T protein:vir:10 393 FSELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQ 472 (537) T ss_pred HHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhcc Confidence 3333444444443222 2221 112222222221 1111 122333332221 0112343333321 222 Q ss_pred C--------------------CCCC----cceeeeccccccccccccccCCCCCCCC------CCC--CCCCCC Q lcl|Aclame:pro 390 P--------------------PEAG----GDRLLVNGNMLPIDMAGQAYLKGGDTNG------EVS--KEGNEG 431 (432) Q Consensus 390 ~--------------------p~~~----gd~~~~~~n~~~~~~~~~~~~~gg~~~~------~~~--~~~~e~ 431 (432) . +.|. |+-.. ....|+ +++++..+ ++| .+++|= T Consensus 473 tDeeI~~~~k~I~~E~k~~~~~~p~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (537) T protein:vir:10 473 TESEIKEIDKEIKQEIADGVIMDPQAMQAMEMGI--GDEEPV-------PEGGEEPQTDPNSAVSPADQKRGEL 537 (537) T ss_pred CHHHHHHHHHHHHHHhhCCCCCCcccccccccCC--CCcccC-------CCCCCCcccCCccCCCCCCccCCCC Confidence 2 1111 11000 000011 11111110 000 112222 No 223 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=95.85 E-value=0.0014 Score=36.29 Aligned_cols=422 Identities=11% Similarity=0.085 Sum_probs=168.2 Q ss_pred CchHHHHHHhccccc-----cccccccccCCchH-HH--HHhhcCCcC--ccc-------ccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-----RQTSQVIELNKDDE-KL--LEWLGISPS--TIS-------VKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-----~~~~~~~~~~~~~~-~~--~~~~g~~~~--~~~-------v~~~~a~~~~~v~~~i~~ia 63 (432) |.= |.+++-..+ +..+.+.+....+. .+ ..+.+.... ... -.++..+.+|.|..||+.|. T Consensus 1 m~~---lfgf~~~~~~~~~~~~~s~~~p~~ddg~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~Av~eIV 77 (558) T protein:vir:10 1 MAK---LFGFSIEETQKKSTSIISPVPKNNEDGVDNFISSGFYGQYVDIEGAYRSEYDLIRRYREMALHPEADGAIEDVV 77 (558) T ss_pred Ccc---hhcchhhhhhhhccCCccccCCCccccccceeccceeeeeecccchhhhHHHHHHHHHHHhhccchhhHHHHhh Confidence 321 111111011 11111111111111 00 011111100 000 12466678999999999999 Q ss_pred Hhhc-----cCceEEEeecCCcc---eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---Cce Q lcl|Aclame:pro 64 ESVS-----KLPLKIYQEDEYGI---QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKV 132 (432) Q Consensus 64 ~~ia-----~~~~~~~~~~~~~~---~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---g~~ 132 (432) +.+. .-|+.+.-.+-+.. .........++|+ --+....+++ +++.|.+.|..|..++.+.. .-+ T Consensus 78 neaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~-ll~F~~~~~e----~fR~WYVDgRiyfHKiid~k~pk~GI 152 (558) T protein:vir:10 78 NEAIVSDLYDSPVEVELSNLNASNTLKKKIREEFRYIKE-MMDFDKKSHE----IFRNWYVDGRVFYLKVIDTKNPQEGI 152 (558) T ss_pred cceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeeeEEEEEEEEeCCCccccc Confidence 8763 23333332222111 0011111122222 2334444455 56667788999998876533 248 Q ss_pred EEEEEEcCcceEEEEcCc----------------c-ceeccceeEEEeccc-------------CceEEEccceEEEEec Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDDV----------------G-LLNSKTKMWYVVNTG-------------GQQRVLKPEEILHFKN 182 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~~----------------~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~vih~~~ 182 (432) .+|..++|..++.++.-. + ........||.|... +....++.+-|.+... T Consensus 153 ~ELr~lDPr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI~y~hS 232 (558) T protein:vir:10 153 QDLRYIDPLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSITMCTS 232 (558) T ss_pred eeeeeeCcccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhheeeecc Confidence 899999999997765420 0 011122233333332 2223445555444432 Q ss_pred CCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccc Q lcl|Aclame:pro 183 GIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHR 256 (432) Q Consensus 183 ~~~-~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~ 256 (432) +.. .+...-.|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ...+|. T Consensus 233 GL~d~~~~~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGe 312 (558) T protein:vir:10 233 GLVDRNKNRVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTGE 312 (558) T ss_pred cceecCCCeeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCce Confidence 211 1223334556767666666555555544433333444555555543 3333344444444333321 011222 Q ss_pred e------ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH---- Q lcl|Aclame:pro 257 I------AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ---- 315 (432) Q Consensus 257 ~------~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~---- 315 (432) + +. + ..|+++++|.-.. .+.-++-.++..+.+..+++||.+-|...+..+.....+-. T Consensus 313 v~ddrk~msMlEDyWLpRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEi 391 (558) T protein:vir:10 313 VRDDRKFMSMMEDFWLPRREGGRGTEITTLPGGQ-NLGELSDVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDEL 391 (558) T ss_pred ecccchhhhhHhhhcccccCCCCccceeeccccC-CcchHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHH Confidence 1 11 1 2467777775422 22223456688899999999999999754444433332322 Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHHh--CCCc Q lcl|Aclame:pro 316 --QQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGIQ--GGFL 378 (432) Q Consensus 316 --~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~g~~ 378 (432) ..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+-. .-++ T Consensus 392 KF~KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~ 471 (558) T protein:vir:10 392 KFAKFVGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKYY 471 (558) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 22222222223333444444443222 2221 112222222221 1111 1223333333211 1233 Q ss_pred CHHHHHH-HhCCCC--------------------CCCcceeeecccccccc-ccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 379 KPNEARS-KEDLPP--------------------EAGGDRLLVNGNMLPID-MAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 379 t~nE~R~-~~gl~p--------------------~~~gd~~~~~~n~~~~~-~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +.+=||+ .|.+.. .|.....+ .....|.+ ++..........+.+......+.+ T Consensus 472 S~dyi~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (558) T protein:vir:10 472 STEYVRKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPI-TGEPLPQEGDPAMEGMGEQPVDPDLEAQAQAVD 546 (558) T ss_pred chHHHHHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChh-hccccCccCCchhccCCCCCcccccccchhhhh Confidence 4444433 233321 11111111 11111111 111011111111111111111111 No 224 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=95.12 E-value=0.0027 Score=34.64 Aligned_cols=394 Identities=13% Similarity=0.084 Sum_probs=161.7 Q ss_pred CchHHHHHHhcccccc---cccc--ccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR---QTSQ--VIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQ 75 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 75 (432) +.-|..++........ .... +....-....+. -....+.-.+++...++.++..+.+-|..+.. T Consensus 20 ~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~-----------~rl~rA~~~n~~~~tl~~l~G~vf~k~p~~~~ 88 (513) T protein:vir:97 20 LPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQ-----------ERLASAVLLNMVEQTLDTLSGKPFSEPIKLNE 88 (513) T ss_pred HHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHH-----------HHHhcccCCChHHHHHHHHhhhhhhcCcccCc Confidence 2222222222111100 0000 000000000000 00011222456667777777766666665421 Q ss_pred ecCCcceeeccchhHH-hhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc-----------------eEEEEE Q lcl|Aclame:pro 76 EDEYGIQRGTKHYLNN-LLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-----------------VQALWP 137 (432) Q Consensus 76 ~~~~~~~~~~~~~~~~-lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~-----------------~~~l~~ 137 (432) . .-..+.. ++...--...+-.+|.+.++...+.+|-+++.+.....+. ..-+.. T Consensus 89 ~--------~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ade~~~~~rPy~~~ 160 (513) T protein:vir:97 89 D--------VPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLADDRREGLRPYWVM 160 (513) T ss_pred C--------chHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHHHHhhccCceEEE Confidence 1 1122332 4444555667999999999999999999999986543221 011222 Q ss_pred EcCcceEE--------------------EEcCccceeccceeEEEecccCceEEE-----------------------cc Q lcl|Aclame:pro 138 IDASKVTV--------------------YIDDVGLLNSKTKMWYVVNTGGQQRVL-----------------------KP 174 (432) Q Consensus 138 ~~~~~v~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~ 174 (432) +.|..|-- +.+.++.. .+....|..-..|..+.+ .. T Consensus 161 ~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~-~~~~~q~rvL~~g~~~v~r~~~~~~~~~~e~~~~~~g~~~l~~ 239 (513) T protein:vir:97 161 IKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFA-EVCKRRIRVLEPGLVQLWEPVKKSNAQKEEWALADEWATGLNY 239 (513) T ss_pred ecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCc-ceEEEEEEEEeCceEEEEEeecCCCccccceEEecCCCCcCCc Confidence 22222200 00111100 000000110111111110 00 Q ss_pred ceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccc Q lcl|Aclame:pro 175 EEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNS 254 (432) Q Consensus 175 ~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~ 254 (432) =-++.+- ....+...|.+|+..++..-..+....--....+...+.|..++.--.....+ ...-|+ T Consensus 240 IP~v~~~-~~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~il~~~~~P~l~~~G~~~~~~~----------~i~iG~--- 305 (513) T protein:vir:97 240 VPLVTFY-ADRQGFMMGKPPLLDLAHLNVAHWQSASDQRHILTVSRFPILACSGASGEDSD----------PVVVGP--- 305 (513) T ss_pred eeEEEEe-cCCCCCCCCccchHHHHHHHHHHHhhhhhHHHHHHhcccceeeeecCCcCCCC----------ceEeec--- Confidence 0122221 22334556888877666654444444444445555667887777532111100 122343 Q ss_pred cceeecCC-C--ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 255 HRIALMPV-G--YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYE 331 (432) Q Consensus 255 g~~~vl~~-g--~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~ 331 (432) ..++.+++ | ..|.+.+-+..+.. .+.++....++ ...|. .+|......-.+........-..+.|.-++..++ T Consensus 306 ~~~~~lpe~~~~~~yie~~g~~i~~~-~~~l~~le~qm-~~~Ga--~ll~~~~~~~Ta~a~~~~~~~~~S~L~~~a~~le 381 (513) T protein:vir:97 306 NKVLYNPDPAGRFYYVEHTGQAIAAG-RTDLKDLEEQM-AGYGA--EFLKRKTGGQTATARALDSAEATSDLSAMTGLFE 381 (513) T ss_pred cccccCCCCCCcceeeccCchhHHHH-HHHHHHHHHHH-HHHHH--HhhccCCccccHHHHHHHHHHHHHHHHHHHHHHH Confidence 33456653 4 45555554433332 22333333333 22332 2232211111122222333444556677778888 Q ss_pred HHHHHhhccchhh----cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhC---C-CCCCCcc----eee Q lcl|Aclame:pro 332 QEMTYKLFLDSEL----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKED---L-PPEAGGD----RLL 399 (432) Q Consensus 332 ~~l~~~ll~~~~~----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~g---l-~p~~~gd----~~~ 399 (432) +.++..+-.-..+ ..+..|.+..+-....-.....+++.+++..|.+|....++.+- . +|.-.-| .+. T Consensus 382 ~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d~d~~~~~e~~~ 461 (513) T protein:vir:97 382 DALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPEDFDEDEDWEELM 461 (513) T ss_pred HHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCccCCHHHHHHHHH Confidence 8777654211110 11123333332222222234567777888999999877766542 2 1210101 010 Q ss_pred --e-ccc-c--ccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 400 --V-NGN-M--LPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 400 --~-~~n-~--~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) + ... . ...+.+.+....+++.+++.+++++||- T Consensus 462 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (513) T protein:vir:97 462 EEISEAMGRAGLDLDPAQKNPPEGGEGEGEGEGEGGEGG 500 (513) T ss_pred HhhhhccCCCCccccccCCCCCCCCCCCCCCCCCCCCCC Confidence 0 000 0 0111122233334555555555555443 No 225 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=94.97 E-value=0.0012 Score=36.63 Aligned_cols=310 Identities=15% Similarity=0.138 Sum_probs=139.0 Q ss_pred CchHHHHHHhccccccccc-cccccCCchHHH----HHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTS-QVIELNKDDEKL----LEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQ 75 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 75 (432) ||||+. +++..- +....+.-.+.- ..+.|.+..+ +.+-+|+.||.- +-.|+ T Consensus 1 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-~~~~~ 56 (320) T protein:vir:97 1 MGIFNF-------KKRETLTPELKESIIRQVTIEDESPFTGTTDFN----------------VRNEVAESIATY-LGAYK 56 (320) T ss_pred CCcccc-------ccccccChhHHhhhhheeeeccCCCcccccccc----------------hhhHHHHHHHHH-hhhhc Confidence 999862 222110 000000000000 0011221111 112222222210 01121 Q ss_pred ecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcceEEEEcCccceec Q lcl|Aclame:pro 76 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNS 155 (432) Q Consensus 76 ~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~v~~~~~~~~~~~~ 155 (432) ... ....+|. .| ..|++.++.+.+-.-..|+++.+.. | ....+.-+++-.+.. T Consensus 57 ~~~---------~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~------ 109 (320) T protein:vir:97 57 TSA---------KRLSLLT--NN-----PSFLRRLVKHALHNKTTYVYKSPTY-G----WLITDSMTIEGLRAR------ 109 (320) T ss_pred ccc---------ceeeeee--CC-----HHHHHHHHHHhhcccceEEeeCCcc-c----eeeecceeeeeeeee------ Confidence 111 1122332 23 3689999999999999998876542 2 111121111111100 Q ss_pred cceeEEEecccC-ceEEEccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC- Q lcl|Aclame:pro 156 KTKMWYVVNTGG-QQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLN- 233 (432) Q Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~- 233 (432) ....-..+.+. ....++-.|+-. ..++.+|..+-+. ..- ...+.....+.+.|.+....+++.+.+.. T Consensus 110 -~~~~~~D~FN~~V~mtvpfyD~~I-----Ldnpl~gv~tqe~-gkM---~g~a~~~v~kkL~~~~~IKafi~Tdid~GL 179 (320) T protein:vir:97 110 -LTFTLPDPFNSAVTMTVPFYDVGI-----IDSPLVEVDTEEA-NKM---LEAAYSAVMKKLHNTGAIKAFISSDIDVGL 179 (320) T ss_pred -EEEecCcccceeEEEEeeeechhh-----hhhhhcccChHHh-hHH---HHHHhhhhhhhccccceeEEEEecccchhH Confidence 00000000000 011122222211 1234556655422 222 22333445566788899999999887753 Q ss_pred HHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH Q lcl|Aclame:pro 234 EDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ 313 (432) Q Consensus 234 ~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~ 313 (432) ++-.++.+..+.++..-+.--.++-+++.|-+++++.....-+. ..-....++..+.-|+||..+|-+. ..+. T Consensus 180 ee~kD~~~~kIk~mq~~A~~~nG~T~i~~~dDI~Qi~pDYS~sn-~~D~~l~~t~alS~y~m~~~IL~Gs------Ate~ 252 (320) T protein:vir:97 180 EKMKEESDSKIKAMLATAELLSGYTYIQRGDDVTQMMPDYTTSN-VTDFAAMRTFAASQLSVSDKILDGS------ATDG 252 (320) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecccccccc-hhHHHHHHHHHHhhcCCchhhcccc------CCcc Confidence 55555666666655443332345678889999999876544332 2334566778888999999998553 4556 Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCC Q lcl|Aclame:pro 314 QQQQFYTDTLQATLTMYE---QEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLP 390 (432) Q Consensus 314 ~~~~~~~~~l~P~~~~i~---~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~ 390 (432) +..+|+...+.|+++++. .+|..++-. ..++.|- + -.|-+..|.+ -| T Consensus 253 ~~Iaf~~~~V~PLL~Q~~~~Ek~Lvy~m~~------E~FVs~m-------t------------TGG~l~S~~~---~~-- 302 (320) T protein:vir:97 253 EKVAVMFRFVEPILEQFREYEPSLIYAMRD------EFFVSFM-------T------------TGGMLNSNRV---DG-- 302 (320) T ss_pred eeeehhhHhHHHHHHHhhhcCcceeeeecc------ceeeeee-------e------------cCceeecccc---cc-- Confidence 677899999999999983 333221110 0112110 0 0333333322 11 Q ss_pred CCCCcceeeeccccccccccccccCCCCCCCCC Q lcl|Aclame:pro 391 PEAGGDRLLVNGNMLPIDMAGQAYLKGGDTNGE 423 (432) Q Consensus 391 p~~~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~ 423 (432) ||.+- +| ...+||+..+- T Consensus 303 ---~~~~~------~~------~~~~~~~~~~~ 320 (320) T protein:vir:97 303 ---WGKEK------AP------NESKGGDVGDV 320 (320) T ss_pred ---ccccc------CC------ccccCCcccCC Confidence 11110 00 01122222111 No 226 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=94.72 E-value=0.0037 Score=33.93 Aligned_cols=411 Identities=9% Similarity=0.089 Sum_probs=179.7 Q ss_pred CchHHHHHHhccccccc-------------cccccccCCchHH--------------HHHhhcCCcCcc------cccHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQ-------------TSQVIELNKDDEK--------------LLEWLGISPSTI------SVKGK 47 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~--------------~~~~~g~~~~~~------~v~~~ 47 (432) |.=|+.+.++|++..+. .+...+....+.. ...+++...... --+++ T Consensus 1 ~~~~~~~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:10 1 MANFNTILSFLKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYR 80 (524) T ss_pred CCchhhHHHHhhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHH Confidence 88787777766655331 1111111111100 001111111100 01245 Q ss_pred HHhccHHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 48 NALKVATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGN 119 (432) Q Consensus 48 ~a~~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~ 119 (432) ..+.+|.|..||+.|.+.+. .-|+.+.-.+-+ ..+.........+|+ --+....+++ +++.|.+.|. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgR 155 (524) T protein:vir:10 81 NLMNNYEVDNAVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVLN-LLNFQRKGTD----HFQRWYVDSR 155 (524) T ss_pred HHhhccchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeece Confidence 66789999999999998753 223333322111 000001111122222 2334444555 5666777899 Q ss_pred eEEEEeeCCC---CceEEEEEEcCcceEEEEc-----Ccccee-ccceeEEEec-------------ccCceEEEccceE Q lcl|Aclame:pro 120 SYANIEFDRK---GKVQALWPIDASKVTVYID-----DVGLLN-SKTKMWYVVN-------------TGGQQRVLKPEEI 177 (432) Q Consensus 120 ~~~~~~~~~~---g~~~~l~~~~~~~v~~~~~-----~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~v 177 (432) .|..++.+.. .-+.+|..++|..++.++. ..+... .....++.|. ..+....++.+.| T Consensus 156 i~fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAI 235 (524) T protein:vir:10 156 IFFHKIINPKKMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAV 235 (524) T ss_pred EEEEEEeeCCCccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhhe Confidence 9998765422 3488999999999977542 111111 1111122222 3334567889999 Q ss_pred EEEecCCCC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----c Q lcl|Aclame:pro 178 LHFKNGITL-DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----L 251 (432) Q Consensus 178 ih~~~~~~~-~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~ 251 (432) +|...+... ++..-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- . T Consensus 236 vy~~SGL~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYD 315 (524) T protein:vir:10 236 VYAHSGLLDCCGKNIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYD 315 (524) T ss_pred eeeccCcccCCCCceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 998754322 233445667777766666655555544443333444555555543 3333344444443333210 0 Q ss_pred ccccce------ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc--cccccHH Q lcl|Aclame:pro 252 QNSHRI------AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK--ATLNNIE 312 (432) Q Consensus 252 ~n~g~~------~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~--~~~~~~~ 312 (432) ..+|.+ +. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...++ -+..... T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~ 394 (524) T protein:vir:10 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTMPGA-TGMSDMDDVLYFRTALYRALRIPESRIPSESNSGVMFDAGT 394 (524) T ss_pred ccCCeeccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCchhccCCCCccccccccc Confidence 112221 11 1 246777776532 22223455678889999999999999954332 2222222 Q ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHH Q lcl|Aclame:pro 313 QQQ------QQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGI 373 (432) Q Consensus 313 ~~~------~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~ 373 (432) +-. ..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+- T Consensus 395 EItRDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~d 474 (524) T protein:vir:10 395 AITRDELKFAKWIRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAE 474 (524) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhh Confidence 222 22222222223334444444443322 2221 112222222221 1111 123333333331 Q ss_pred h--CCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 Q--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 374 ~--~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) . .-+++.+=||+ .|.+...+ ..++..... ..+.--+ + + +..+++ T Consensus 475 pyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E-------~k~~~~~--~----~--~~~~~~ 523 (524) T protein:vir:10 475 PFIGKYISHQTAMKDFLQMTDEEINQEAKQIEEE-------SKEARFQ--N----P--DEEEED 523 (524) T ss_pred hhhcccchhHHHHHHHhccCHHHHHHHHHHHHHH-------hhcCCCC--C----C--Chhhhc Confidence 1 22445655654 35554321 111111000 0000000 0 0 000111 No 227 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=94.15 E-value=0.0052 Score=33.09 Aligned_cols=411 Identities=8% Similarity=0.070 Sum_probs=177.0 Q ss_pred CchHHHHHHhccccc---------cccccccccCCchH----------HHHHh----hcCCcCcc-----cccHHHHhcc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK---------RQTSQVIELNKDDE----------KLLEW----LGISPSTI-----SVKGKNALKV 52 (432) Q Consensus 1 Mg~~~~l~~~~~~~~---------~~~~~~~~~~~~~~----------~~~~~----~g~~~~~~-----~v~~~~a~~~ 52 (432) |++++.|+-|..... +..+.+.+....+. .+... ++...... --.++..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 888875543222111 11111111111111 00111 11111000 0124666789 Q ss_pred HHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE Q lcl|Aclame:pro 53 ATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI 124 (432) Q Consensus 53 ~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~ 124 (432) |.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCR-LLDASRKLDT----LFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEEEE Confidence 999999999998763 223333222111 000001111122222 2344445555 556667789999986 Q ss_pred eeC-CCCceEEEEEEcCcceEEEEcC-----ccce-eccceeEEEec-------cc------CceEEEccceEEEEecCC Q lcl|Aclame:pro 125 EFD-RKGKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN-------TG------GQQRVLKPEEILHFKNGI 184 (432) Q Consensus 125 ~~~-~~g~~~~l~~~~~~~v~~~~~~-----~~~~-~~~~~~~~~~~-------~~------~~~~~~~~~~vih~~~~~ 184 (432) +.+ ...-+.+|..++|..++.++.- .+.. ......++.|. .+ +....++.+-|.|...+. T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 654 2344889999999999887632 1110 00001111111 11 234556666666665332 Q ss_pred CC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccce- Q lcl|Aclame:pro 185 TL-DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHRI- 257 (432) Q Consensus 185 ~~-~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~~- 257 (432) .. +...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- ..++|.+ T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 22 222335667777776666655555544443333444555555543 3333344444333333321 1122221 Q ss_pred -----ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHHH--- Q lcl|Aclame:pro 258 -----AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQQ--- 316 (432) Q Consensus 258 -----~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~~--- 316 (432) +. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+..+. ....+..+ T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 11 1 246777776532 22223455668889999999999999975443221 22222222 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 317 ---QFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGI--QGGFL 378 (432) Q Consensus 317 ---~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~--~~g~~ 378 (432) .|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+- -..++ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 2222222223333444444443222 2221 112222222221 1111 223444443332 24577 Q ss_pred CHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 379 KPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 379 t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) +.+=||+ .|.+...+ ..++.....- .+.--+..+..++- T Consensus 475 s~~yi~k~ILr~tDeei~~e~k~I~~E~-------~~~~~~~p~~~~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQMTEEQIAQEEKQIEQEA-------GIKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhcCCHhhHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 7777765 46665432 1111110000 00000000001111 No 228 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=94.15 E-value=0.0052 Score=33.09 Aligned_cols=411 Identities=8% Similarity=0.070 Sum_probs=177.0 Q ss_pred CchHHHHHHhccccc---------cccccccccCCchH----------HHHHh----hcCCcCcc-----cccHHHHhcc Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK---------RQTSQVIELNKDDE----------KLLEW----LGISPSTI-----SVKGKNALKV 52 (432) Q Consensus 1 Mg~~~~l~~~~~~~~---------~~~~~~~~~~~~~~----------~~~~~----~g~~~~~~-----~v~~~~a~~~ 52 (432) |++++.|+-|..... +..+.+.+....+. .+... ++...... --.++..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 888875543222111 11111111111111 00111 11111000 0124666789 Q ss_pred HHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE Q lcl|Aclame:pro 53 ATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI 124 (432) Q Consensus 53 ~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~ 124 (432) |.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCR-LLDASRKLDT----LFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEEEE Confidence 999999999998763 223333222111 000001111122222 2344445555 556667789999986 Q ss_pred eeC-CCCceEEEEEEcCcceEEEEcC-----ccce-eccceeEEEec-------cc------CceEEEccceEEEEecCC Q lcl|Aclame:pro 125 EFD-RKGKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN-------TG------GQQRVLKPEEILHFKNGI 184 (432) Q Consensus 125 ~~~-~~g~~~~l~~~~~~~v~~~~~~-----~~~~-~~~~~~~~~~~-------~~------~~~~~~~~~~vih~~~~~ 184 (432) +.+ ...-+.+|..++|..++.++.- .+.. ......++.|. .+ +....++.+-|.|...+. T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 654 2344889999999999887632 1110 00001111111 11 234556666666665332 Q ss_pred CC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccce- Q lcl|Aclame:pro 185 TL-DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHRI- 257 (432) Q Consensus 185 ~~-~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~~- 257 (432) .. +...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- ..++|.+ T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 22 222335667777776666655555544443333444555555543 3333344444333333321 1122221 Q ss_pred -----ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHHH--- Q lcl|Aclame:pro 258 -----AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQQ--- 316 (432) Q Consensus 258 -----~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~~--- 316 (432) +. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+..+. ....+..+ T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGA-QTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 11 1 246777776532 22223455668889999999999999975443221 22222222 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 317 ---QFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGI--QGGFL 378 (432) Q Consensus 317 ---~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~--~~g~~ 378 (432) .|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+- -..++ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 2222222223333444444443222 2221 112222222221 1111 223444443332 24577 Q ss_pred CHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 379 KPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 379 t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) +.+=||+ .|.+...+ ..++.....- .+.--+..+..++- T Consensus 475 s~~yi~k~ILr~tDeei~~e~k~I~~E~-------~~~~~~~p~~~~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQMTEEQIAQEEKQIEQEA-------GIKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhcCCHhhHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 7777765 46665432 1111110000 00000000001111 No 229 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=93.85 E-value=0.0062 Score=32.69 Aligned_cols=407 Identities=11% Similarity=0.092 Sum_probs=179.4 Q ss_pred CchHHHHHHhcc---ccccccccccccCCchH----------HHHH-hhcCCcCc--------ccccHHHHhccHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFN---FEKRQTSQVIELNKDDE----------KLLE-WLGISPST--------ISVKGKNALKVATVFAC 58 (432) Q Consensus 1 Mg~~~~l~~~~~---~~~~~~~~~~~~~~~~~----------~~~~-~~g~~~~~--------~~v~~~~a~~~~~v~~~ 58 (432) |.+|.+.-..-. ...+..+...+....+. .... +.|..... .--+++..+.+|.|..| T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~A 80 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRALAEYHEVDDA 80 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHHhhccchhhH Confidence 666644321100 01111111111111111 0111 11111110 01124666789999999 Q ss_pred HHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC Q lcl|Aclame:pro 59 IKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG 130 (432) Q Consensus 59 i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g 130 (432) |+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|..++.+... T Consensus 81 v~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~fHkiid~k~ 155 (511) T protein:vir:56 81 IQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVVS-LLQMRKHGYK----WFRKWYVDSRIYFHKILDKDN 155 (511) T ss_pred HHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEEEEEecccc Confidence 999998763 233333322111 000001111122222 2344445555 556677789999988777665 Q ss_pred ceEEEEEEcCcceEEEEcC-------ccceeccceeEEEeccc--------------CceEEEccceEEEEecCCC---C Q lcl|Aclame:pro 131 KVQALWPIDASKVTVYIDD-------VGLLNSKTKMWYVVNTG--------------GQQRVLKPEEILHFKNGIT---L 186 (432) Q Consensus 131 ~~~~l~~~~~~~v~~~~~~-------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~vih~~~~~~---~ 186 (432) -+.+|..++|..++.++.- .... .....++.|... .....++.+.|.|...+.. . T Consensus 156 GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~-~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~ 234 (511) T protein:vir:56 156 NIIELRPLNPMKMELVREIQKETIDGVEVV-KGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCA 234 (511) T ss_pred ceeehhhcCcccchhhhhhhcccccccccc-cceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccC Confidence 6899999999998876431 1111 112223333221 1336688999988775543 3 Q ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccce---- Q lcl|Aclame:pro 187 DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHRI---- 257 (432) Q Consensus 187 ~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~~---- 257 (432) +..+.+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ...+|.+ T Consensus 235 ~~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddr 314 (511) T protein:vir:56 235 DDPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTT 314 (511) T ss_pred CCCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccch Confidence 445677878888887777666666555444344455555555543 3333344444333333221 0112221 Q ss_pred --ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc---cccccHHHHH------ Q lcl|Aclame:pro 258 --AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK---ATLNNIEQQQ------ 315 (432) Q Consensus 258 --~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~---~~~~~~~~~~------ 315 (432) +. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+. -+.....+-. T Consensus 315 k~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEiKF 393 (511) T protein:vir:56 315 NAMSMLEDYYLPRREGSKGTEVSTLPGG-QSLGDIEDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDELKF 393 (511) T ss_pred hhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHHHH Confidence 11 1 246777777532 22333455668889999999999999964321 1211222221 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHHh--CCCcCH Q lcl|Aclame:pro 316 QQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGIQ--GGFLKP 380 (432) Q Consensus 316 ~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~g~~t~ 380 (432) ..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+-. .-+++. T Consensus 394 ~KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~ 473 (511) T protein:vir:56 394 TKFVKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYYSH 473 (511) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhccccch Confidence 22222222223334444444443222 2221 112222222221 1111 1223333322211 223466 Q ss_pred HHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 381 NEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 381 nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +=||+ .|.+...+ ..++.. . .|..+ +--+..|.+ T Consensus 474 ~yi~k~ILr~tDeei~~~~k~I--------~---------~E~k~-~~~~~~e~~ 510 (511) T protein:vir:56 474 KYIQKNILRLSDDQITAMQSEI--------D---------EEETN-PRFQQDDQG 510 (511) T ss_pred HHHHHHHhccCHHHHHHHHHHH--------H---------HhhcC-CCCCCcccC Confidence 65654 34443221 011000 0 00000 000111111 No 230 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=93.48 E-value=0.0074 Score=32.26 Aligned_cols=379 Identities=9% Similarity=-0.002 Sum_probs=157.9 Q ss_pred Cch-------------HHHHHHhcccccc---ccc--cccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MKI-------------VDSVKKFFNFEKR---QTS--QVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKIL 62 (432) Q Consensus 1 Mg~-------------~~~l~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~i 62 (432) |++ |..++........ ... -+....-........ ...+.-.+++...++.+ T Consensus 1 m~V~~~hp~y~a~~~~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~~~Y~~r-----------l~rA~~~n~~~~t~~~~ 69 (452) T protein:vir:94 1 MPIETKHPEYLAYENDWIDCRVASLGQREVKKKGVRFLPKLSGQTDDMYNAY-----------KQRALFYSITSKTLSAL 69 (452) T ss_pred CCCCCcCHHHHHHHHHHHHHHHHhcChHHHHcCCcccCCCCCCCCHHHHHHH-----------HhhccCCchHHHHHHHH Confidence 442 2222222111100 000 000000000000000 01112246677778877 Q ss_pred HHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceEEEEEEcCcc Q lcl|Aclame:pro 63 SESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASK 142 (432) Q Consensus 63 a~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~~l~~~~~~~ 142 (432) +..+.+-|..+.- ...+.++ +. -....+-.+|.+.++...+.+|-+++.+.....|...-+..+.|.. T Consensus 70 ~G~vf~k~p~~~~----------p~~l~~~-~~-D~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy~~~~~~~~ 137 (452) T protein:vir:94 70 SGMVLDQPPVITH----------PDAMSKY-FE-DQSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPYISVYTTEN 137 (452) T ss_pred hchhhcCCceecc----------cHHHHHH-Hh-cccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceEEEEechhh Confidence 7777776665521 1123333 21 3567899999999999999999999999877666432333333322 Q ss_pred eEE-------------------EEcCc-cceeccceeEE-------------EecccCceEE----Ec--c----ceEEE Q lcl|Aclame:pro 143 VTV-------------------YIDDV-GLLNSKTKMWY-------------VVNTGGQQRV----LK--P----EEILH 179 (432) Q Consensus 143 v~~-------------------~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~----~~--~----~~vih 179 (432) |-- ..+.. .........++ ....++.... .. . -..|= T Consensus 138 Ii~W~~~~~g~l~~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP 217 (452) T protein:vir:94 138 ILNWEEDEDGRLLMVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIP 217 (452) T ss_pred hcCccccccCCeeEEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeE Confidence 210 11110 00000000000 0001111100 00 0 01111 Q ss_pred Ee--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccccce Q lcl|Aclame:pro 180 FK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSHRI 257 (432) Q Consensus 180 ~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~ 257 (432) |. .....+...|.+|+..++..-..+....--....+...+.|..++.--.... ...-|+ +.+ T Consensus 218 ~v~~~~~~~~~~~~~pPLl~LA~ln~~hy~~~sd~~~~l~~~~~P~l~~~g~~~~~------------~i~iG~---~~~ 282 (452) T protein:vir:94 218 FFCITPSGLSMTPAKPPMIDIVDINYSHYRTSADLEHGRHFTGLPTPWITGAESQS------------TMHIGS---TKA 282 (452) T ss_pred EEEEcCCCCCCCCCccchHHHHHHHHHHhcchhHHHHHHHHcccceeEeecCcCCC------------ceEecc---ccc Confidence 11 2233345578888877666644444444444455566678877776432211 112243 345 Q ss_pred eecCC-Cc--eeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccc-cccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 258 ALMPV-GY--QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKAT-LNNIEQQQQQFYTDTLQATLTMYEQE 333 (432) Q Consensus 258 ~vl~~-g~--~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~-~~~~~~~~~~~~~~~l~P~~~~i~~~ 333 (432) +.+++ |. .|.+.+-+..... .+.++....+. ...|- .++-.....+ .+........-....|.-++..+++. T Consensus 283 ~~lpe~~~~~~yie~~g~~i~~~-~~~l~~le~~m-~~~Ga--~ll~~~~~~~~s~ea~~~~~~~~~s~L~~~a~~~e~a 358 (452) T protein:vir:94 283 WVIPEVAAKVGFLEFTGQGLQSL-EKALSEKQAQL-ASLSA--RLIDNSTRGSEATETVKLRYMSETASLKSVTRAVEAL 358 (452) T ss_pred ccCCCCCCcceEEccCchhHHHH-HHHHHHHHHHH-HHHHH--HhhccCCCcchHHHHHHHHHHHhhHHHHHHHHHHHHH Confidence 66774 54 5555554444422 22222222222 11121 2222111111 11111222233356777777888877 Q ss_pred HHHhhc-cchhh--cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCcceeeeccccccc Q lcl|Aclame:pro 334 MTYKLF-LDSEL--DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDRLLVNGNMLPI 407 (432) Q Consensus 334 l~~~ll-~~~~~--~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~~gd~~~~~~n~~~~ 407 (432) +++.+= ..... ..+..+....+-+.........+++.+++..|.++....++.+ |....+.-++..+ . T Consensus 359 l~~~l~~~a~w~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~e~~~i~------~ 432 (452) T protein:vir:94 359 LNKAYSCIMDMESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPGESMGVI------P 432 (452) T ss_pred HHHHHHHHHHHcCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCccCHHHHH------H Confidence 765431 11000 1122333333333333334456667788999999999988887 5543221111100 0 Q ss_pred cccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 408 DMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 408 ~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) +.......+.+ ++++.+++- T Consensus 433 E~~~~~~~~~~----~~~~~~~~~ 452 (452) T protein:vir:94 433 DPPAPEPSPSN----TPPNPSSKA 452 (452) T ss_pred HhhccCcccCC----CCCCCccCC Confidence 00000011111 111111111 No 231 >protein:vir:105154 Length: 525 # NCBI annotation: conserved phage-related protein # Family: family:all:6660 # MgeID: mge:1466 # MgeName: C-St # Cross-refs: genbank:acc:YP_398597;genbank:gi:80159853;genbank:GeneID:3772992 Probab=92.25 E-value=0.012 Score=31.08 Aligned_cols=393 Identities=15% Similarity=0.134 Sum_probs=162.8 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCccc--ccHHHHhc--cHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS--VKGKNALK--VATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--v~~~~a~~--~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) |.+|+. ..........+..||+....... ++.-+++. ...|+.-.++ |-++|---|.. T Consensus 51 ~~~~~n--------------g~i~~v~~~~l~~~f~npd~~~~~i~~l~~y~yi~~~~v~ql~~l----i~~lp~l~y~i 112 (525) T protein:vir:10 51 MDLCNN--------------GKIKTVNLDTLQLWFNNPDKYINNIVNLLTYYYIIDGNVFQLYDL----IFSLPPLDYQI 112 (525) T ss_pred HHhhcC--------------CceeeeeHHHHHhhhcChHHHHHHHHHHHHHhhhhcchHHHHHHH----HHhcCCcceee Confidence 333321 11111112223334432211110 11111211 1224443333 33444333322 Q ss_pred cCCcc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeE--------------------EEEeeCCCCceEEE Q lcl|Aclame:pro 77 DEYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSY--------------------ANIEFDRKGKVQAL 135 (432) Q Consensus 77 ~~~~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~--------------------~~~~~~~~g~~~~l 135 (432) +-=.+ .....| .-+||..-..-.--.++-+.++.++...|.-. +.+--...|.. . T Consensus 113 ~~~~~~k~~~~~--~s~~n~~l~k~i~hk~ltrdll~q~a~~gtlig~wlg~~~~py~~vf~~~kyvfp~~r~~g~~--v 188 (525) T protein:vir:10 113 KVLKRDKDYKED--LSTINLYLEKKIQHKQLTRDLLVQLAHSGTLIGTWLGSKREPYFNVFNNLKYVFPYGRAKGKM--V 188 (525) T ss_pred hhhhhccchhhH--HHHHHHHHHHhHHHHHHHHHHHHHhhccCceeEeeecCCCCcchhhhhhhhhhccccccCCce--E Confidence 21000 000001 11122111111111222223333333333211 11111111211 1 Q ss_pred EEEcCcceEEEEcCcc----------ceeccceeEEEecccC----ceEEEccceEEEEecCC-CCCcccccCHHHHHHH Q lcl|Aclame:pro 136 WPIDASKVTVYIDDVG----------LLNSKTKMWYVVNTGG----QQRVLKPEEILHFKNGI-TLDGLVGVPTMEYLKS 200 (432) Q Consensus 136 ~~~~~~~v~~~~~~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~vih~~~~~-~~~~~~G~s~~~~~~~ 200 (432) .+++...++...+... ........+..+.... ....+|-+.++|.|-.- ..++..|.|.+..+.. T Consensus 189 ~vid~~~f~~~~~~~r~~~~~~lsp~i~~~~y~~~~~~~~~~~~~~r~i~LP~e~t~~lr~~tl~rnqrlG~s~vtp~l~ 268 (525) T protein:vir:10 189 AVIDLQWFDEMSELERKLTFENLSPLITENKYKKWKEYNGENEDALRYIMLPISKTLVARIHTLSRNQRLGIPYGTQTLF 268 (525) T ss_pred EEEehHHhhhhhHHHHHHHHHhhchhhhhhhhhHHhhcccccchhheeeecccceeEEeeecccccCcccCcchhhhHHH Confidence 1222222211111000 0000011111111111 23568899999999553 4455669998888888 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceEEEeCCCCC-----HH-HHHHHHHHHHHHhcc-cccccceee--cCCCceee--ec Q lcl|Aclame:pro 201 TLENSASADKFINNFYKQGLQVKGLVQYVGDLN-----ED-AKKVFRENFESMSSG-LQNSHRIAL--MPVGYQFQ--PI 269 (432) Q Consensus 201 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~g-~~n~g~~~v--l~~g~~~~--~~ 269 (432) .+...........++...=..+-.++++.+.-. ++ ...++....+.+... .+...++.+ ++.=++++ .+ T Consensus 269 dI~hk~klrd~EqsIA~kii~a~avLk~gg~~gn~mk~p~~~kqkil~gVk~aleK~~kdK~Gi~vi~~Pdfa~~efp~i 348 (525) T protein:vir:10 269 DIQHKQKLRDLEQSIADKIIKAMAVLKFRGKDDNDSKVKESAKRKVLAGVKRALEKGVKDKNGIACIAMPDFATFEFPEI 348 (525) T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeccccCccccCchHHHHHHHHHHHHHHhcccccccCeEEEeccceeecccccc Confidence 888877777777777777677777787765421 33 333444444444432 222223333 33333333 12 Q ss_pred CC--ChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhh Q lcl|Aclame:pro 270 SL--NMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLF---LDSEL 344 (432) Q Consensus 270 ~~--~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll---~~~~~ 344 (432) .. ..-|-+ --+...++|-.++|++..++.+ +.+||+++.-...-||.. +.=+++.|++.. ++++ .+. T Consensus 349 k~~~~glDg~---K~d~I~~DI~~A~GlS~sL~nG-dggNyAtaslnld~fykk-igVm~e~Iee~y-~kL~d~Vl~~-- 420 (525) T protein:vir:10 349 KNGDKTLDPK---KYDSIDNDITNATGISQVLTNG-TKGNYASAKLNLDVFYKK-IGVMLEIIEEIY-NQLIDIILGE-- 420 (525) T ss_pred cCcccCCCch---hhhhhhhhhhhhhccceeeecC-CCCceeeeeeeHHHHHHH-HHHHHHHHHHHH-HHHHhhhcCc-- Confidence 11 111111 2346678999999999999876 446787777666666665 555677777544 3332 222 Q ss_pred cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC------------cce-eeeccccccccccc Q lcl|Aclame:pro 345 DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG------------GDR-LLVNGNMLPIDMAG 411 (432) Q Consensus 345 ~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~------------gd~-~~~~~n~~~~~~~~ 411 (432) ..+.-+-|..+.-...+.+++.+..-++...||. .--+....|..-.|. .++ .+.|.+. T Consensus 421 ~k~~nyifnydkd~pi~~kkk~d~LIkL~d~g~s-~k~vldl~gis~e~y~E~s~yEtE~lkl~EKi~pp~~~------- 492 (525) T protein:vir:10 421 EKGCNYIFQYNKDTPIEREKKLDTLIKLEAQGYS-AKYVLDILGISSEEYFEESIYEIEKLKLREKIMPPLNT------- 492 (525) T ss_pred ccCcceEEecCCCchhhhhhhhhhhhhhhccchh-hhhhhhhhccCcchHHHHHHHHHHHHHHhhhccccccc------- Confidence 2333333444544556777777788888878874 333333444332110 111 1111111 Q ss_pred cccCCC-CCCCCCCCCCCCCCC Q lcl|Aclame:pro 412 QAYLKG-GDTNGEVSKEGNEGN 432 (432) Q Consensus 412 ~~~~~g-g~~~~~~~~~~~e~~ 432 (432) ....| ..+.-..|++.++++ T Consensus 493 -~v~SGk~~n~iG~P~~dd~~~ 513 (525) T protein:vir:10 493 -NVLSGKDGNDIGSPKLDDSDS 513 (525) T ss_pred -eeeeccccccccCCccCCCcc Confidence 01111 011112222222222 No 232 >protein:vir:6596 Length: 521 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891727;genbank:gi:33620636;genbank:GeneID:1725288 Probab=92.24 E-value=0.012 Score=31.07 Aligned_cols=411 Identities=8% Similarity=0.068 Sum_probs=173.1 Q ss_pred CchHHHHHHhccccc---------cccccccccCCchHHHH---------HhhcCCcCccc------------ccHHHHh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK---------RQTSQVIELNKDDEKLL---------EWLGISPSTIS------------VKGKNAL 50 (432) Q Consensus 1 Mg~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~------------v~~~~a~ 50 (432) ..+++.|+.|++... +..+...+-...+.... .+.|.....+. -+++..+ T Consensus 2 ~~~l~~~~~~~~~d~~~~~e~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~~~g~~~~~~~~e~~~~~~~eLI~~YR~ma 81 (521) T protein:vir:65 2 FSRLKMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNSPASSWNSLTQQFYSTDQKISTTKQLVNTYRGLM 81 (521) T ss_pred ccchhhhhhccCchhhHHHhhhccCCCcccCCCCCCCceeecccCCccccccccceeeeccccchhhhHHHHHHHHHHHh Confidence 233333343433222 11111111111111100 00111111111 1135667 Q ss_pred ccHHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEE Q lcl|Aclame:pro 51 KVATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYA 122 (432) Q Consensus 51 ~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~ 122 (432) .+|.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|. T Consensus 82 ~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~f 156 (521) T protein:vir:65 82 NNHEVENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLN-TIQFDRRGQD----MFRRWYVDSRIFF 156 (521) T ss_pred hccchhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceeEE Confidence 89999999999998763 223333221111 000001111122222 2344445555 5666777899999 Q ss_pred EEeeCCC--CceEEEEEEcCcceEEEEcCcc------ceeccceeEEEecc-------------cCceEEEccceEEEEe Q lcl|Aclame:pro 123 NIEFDRK--GKVQALWPIDASKVTVYIDDVG------LLNSKTKMWYVVNT-------------GGQQRVLKPEEILHFK 181 (432) Q Consensus 123 ~~~~~~~--g~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~-------------~~~~~~~~~~~vih~~ 181 (432) .++.+.+ .-+.+|..++|..++.++...- ........++.|.. .+....++.+-|.+.. T Consensus 157 hkiid~~pk~GI~ELr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~h 236 (521) T protein:vir:65 157 HKIIGKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAH 236 (521) T ss_pred EEEEcCCccccceeeeeeCCcceeeeeeecccccCCcceecceeeeeeeecCCcceeccceeecCCcceeechhheeeee Confidence 8885433 4489999999999988763211 11111222222221 1223445665555554 Q ss_pred cCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----ccccc Q lcl|Aclame:pro 182 NGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSH 255 (432) Q Consensus 182 ~~~-~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g 255 (432) .+. +.+...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- ...+| T Consensus 237 SGl~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TG 316 (521) T protein:vir:65 237 SGLMDCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTG 316 (521) T ss_pred ccceeCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccc Confidence 332 22232334667777777666665555544443334444555555543 3333444444444443321 11122 Q ss_pred ------ceee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc--ccccHHH--- Q lcl|Aclame:pro 256 ------RIAL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQ--- 313 (432) Q Consensus 256 ------~~~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~--~~~~~~~--- 313 (432) +.+. + ..|+++++|.-- ..+.-++-.++..+.+..+++||.+-+...+.+ +.....+ T Consensus 317 ev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~gr~~EItR 395 (521) T protein:vir:65 317 KLKNQQANLSMTEDYWLQRRDGKAITDVTTLPGA-SGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITR 395 (521) T ss_pred cccccccccchhhhhcccccCCCCccceeecccC-CCcChHHHHHHHHHHHHHHhCCCceeccCCCCcceeccccchhhH Confidence 2211 1 246777777531 222233556688899999999999998543332 2122222 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhh----hhhh-HHHHHHHHHHHHh--C Q lcl|Aclame:pro 314 ---QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRAD-IKTRYEAYRTGIQ--G 375 (432) Q Consensus 314 ---~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~ 375 (432) -+..|+...=.-+...+.+.|.+.|+.+.-.... +++.|..+.. .... +..|+..+..+-. . T Consensus 396 DEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvG 475 (521) T protein:vir:65 396 DELEFSKFIRTLQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIG 475 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhc Confidence 1222222222234444444444444332221111 2223322221 1111 1233333333211 2 Q ss_pred CCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 376 GFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 376 g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) -+++.+=||+ .|.+...+ ..++.. .. ..+.+-- ..-+.++++ T Consensus 476 ky~S~dyi~k~ILr~tDeei~~~~k~I--------~~----E~~~~~~---~~p~~~~~~ 520 (521) T protein:vir:65 476 KYFSNQTVMRDILKYTDDQMDTEKKQI--------EE----EANDPRF---KQTPDEIED 520 (521) T ss_pred cccchHHHHHHHhccCHHHHHHHHHHH--------HH----hhhCCCC---CCCcccccC Confidence 2446666654 34543321 111100 00 0000000 001111122 No 233 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=91.87 E-value=0.014 Score=30.77 Aligned_cols=422 Identities=13% Similarity=0.126 Sum_probs=170.7 Q ss_pred CchHHHHHHhccccc-c-ccccccccCCchH--HH-HHhhcCCcCcc-----------cccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK-R-QTSQVIELNKDDE--KL-LEWLGISPSTI-----------SVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg~~~~l~~~~~~~~-~-~~~~~~~~~~~~~--~~-~~~~g~~~~~~-----------~v~~~~a~~~~~v~~~i~~ia~ 64 (432) |+= |.++.-.++ . ....+.+....+. .+ ..++|...... --.++..+.+|.|..||+.|.+ T Consensus 1 m~~---lfgf~i~~~~~~~~~S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~ma~~pEVd~Av~eIVn 77 (564) T protein:vir:10 1 MSQ---LFGFLINEKEGQKGQSPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDMSLHPEVDSAIDEIVN 77 (564) T ss_pred Ccc---hhcceeeeeccCCCCCcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHHhhccchhhHHHHhhc Confidence 442 222211111 1 1111112221111 11 11222211111 0124566789999999999998 Q ss_pred hhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC----CCce Q lcl|Aclame:pro 65 SVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR----KGKV 132 (432) Q Consensus 65 ~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~----~g~~ 132 (432) .+. .-|+.|.-.+.+ ..+.........+|+ --+....+++ +++.|.+.|..|..++.+. .| + T Consensus 78 eaIv~d~~~~pV~vdL~~~~~s~siK~kI~eEF~~Il~-ll~F~~~~~e----~fR~WYVDgRi~fHkiid~~~pk~G-I 151 (564) T protein:vir:10 78 EFVVNDGDDKPVEVDLQNLEIGSGVKKKIRDEFNRILR-MMNFNVNAHE----IIRNWYVDGRSHYHKVIDLDNPKKG-I 151 (564) T ss_pred ceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEEEEEeeCCChhhh-h Confidence 742 222322221111 000000111122222 2344445555 5666777899999876542 24 8 Q ss_pred EEEEEEcCcceEEEEcCc------cceecc----------ceeEEEeccc-----------------CceEEEccceEEE Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDDV------GLLNSK----------TKMWYVVNTG-----------------GQQRVLKPEEILH 179 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~~------~~~~~~----------~~~~~~~~~~-----------------~~~~~~~~~~vih 179 (432) .+|..++|..++.++..- .....+ ...+|.+... +....++.+.|.| T Consensus 152 ~eLr~lDPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y 231 (564) T protein:vir:10 152 LELRYIDSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQ 231 (564) T ss_pred hhhhhhcccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhcce Confidence 899999999888776211 111000 1124444422 1235678888888 Q ss_pred EecCCCC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----ccc Q lcl|Aclame:pro 180 FKNGITL-DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQN 253 (432) Q Consensus 180 ~~~~~~~-~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n 253 (432) .+.+... +...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ... T Consensus 232 ~hSGL~d~~~~~i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~ 311 (564) T protein:vir:10 232 STSGLMDLNKKMTLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQ 311 (564) T ss_pred ecccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEecc Confidence 7754322 333445556767666666655555544433333444555555543 3333344444444333321 011 Q ss_pred ccce------ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc-ccccccHHHH- Q lcl|Aclame:pro 254 SHRI------AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIEQQ- 314 (432) Q Consensus 254 ~g~~------~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~-~~~~~~~~~~- 314 (432) +|.+ +. + ..|+++++|.-.. .+.-++-.++..+.+..+++||.+-|.... ..+.....+. T Consensus 312 TGevrddrk~msMlEDyWLPRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EIt 390 (564) T protein:vir:10 312 TGEIRDDKKHMSMLEDFWLPRREGGRGTEITTLPGGQ-NLGELKDVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEIL 390 (564) T ss_pred CceecccchhhhhHhhhcccccCCCcccceeeccccC-CcchHHHHHHHHHHHHHHhCCCcccccCCCceeecccccchh Confidence 2211 11 1 2467777775422 222234566888999999999999997542 1222112221 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhccc-----hhhcc---hhhhhhhhhhh----hhhh-HHHHHHHHHHH--Hh Q lcl|Aclame:pro 315 -----QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK---GFYSKFNVDAI----LRAD-IKTRYEAYRTG--IQ 374 (432) Q Consensus 315 -----~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~---~~~~~fd~~~l----~~~d-~~~~~~~~~~~--~~ 374 (432) +..|+...=.-+...+.+.|.+.|+.+ .++.. .+++.|..|.. .... +..|+..+..+ +- T Consensus 391 RDEiKF~KFI~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyv 470 (564) T protein:vir:10 391 RDELKFTKFIGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFV 470 (564) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhh Confidence 222222222223333444444443222 22211 12222222221 1111 12233333222 00 Q ss_pred CCCcCH------------HHHHHH---------hCC--CCC--CCcceeeec-cccccccccc------cccCC--CCCC Q lcl|Aclame:pro 375 GGFLKP------------NEARSK---------EDL--PPE--AGGDRLLVN-GNMLPIDMAG------QAYLK--GGDT 420 (432) Q Consensus 375 ~g~~t~------------nE~R~~---------~gl--~p~--~~gd~~~~~-~n~~~~~~~~------~~~~~--gg~~ 420 (432) .-+++. +|+-++ -|+ +|. +.||..-++ ..+.|....- +.... ++.. T Consensus 471 Gky~S~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~a~ 550 (564) T protein:vir:10 471 GKYFSTEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKKLNSAP 550 (564) T ss_pred ccccchHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhhhccCC Confidence 112233 332211 122 221 123322111 1122221100 00010 1111 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 421 NGEVSKEGNEGN 432 (432) Q Consensus 421 ~~~~~~~~~e~~ 432 (432) ...+...+.++. T Consensus 551 ~~~~~~~~~~~~ 562 (564) T protein:vir:10 551 KPPPSQQSKSQS 562 (564) T ss_pred CCCCCCCCcCcC Confidence 111111111221 No 234 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=91.47 E-value=0.016 Score=30.48 Aligned_cols=373 Identities=7% Similarity=-0.017 Sum_probs=161.1 Q ss_pred Cc-------------hHHHHHHh---ccccccccccccccCCchHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MK-------------IVDSVKKF---FNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg-------------~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~ 64 (432) |. -..++... ...+.. ..... ....+... .....+..=+.+....-+++..+. T Consensus 1 l~~~~i~~~i~~~~~~~~r~~~~~~YY~g~~~--i~~~~--------~~~~~~~~-~~~~~~~~ki~~n~~~~Ivd~~~~ 69 (451) T protein:vir:10 1 MELEKIRAIISADAARRQEILQAKSYYYNKND--ILKKG--------VVVQNRDE-NPLRNADNRISHNFHEILVDEKAS 69 (451) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCc--ccccc--------cccccccc-ccccccccccccchHHHHHHhhhh Confidence 11 11111111 111000 00000 00000000 000000001124556667888888 Q ss_pred hhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC-------ceEEEEE Q lcl|Aclame:pro 65 SVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-------KVQALWP 137 (432) Q Consensus 65 ~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g-------~~~~l~~ 137 (432) .+-+-|+.....+++.. .....-+. . | ........+...++.+|.||..+.++... ....+.. T Consensus 70 yl~G~p~~~~~~~~~~~-----~~~~~~~~-~-n---~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~~~~~~~ 139 (451) T protein:vir:10 70 YMFTYPVLFDIDNNKEL-----NEKVTDVL-G-N---EFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQTFKYGV 139 (451) T ss_pred heecccceeecCCcHHH-----HHHHHHHh-c-c---CHHHHHHHHHHHHhhcCeEEEEEeecCCcccccccccceeEEE Confidence 88777876532221110 01111111 1 2 34566677889999999999988776541 1234667 Q ss_pred EcCcceEEEEcCcccee-ccceeEEEecc--cC--------ceEEEccceEEEEecC---------------CCC----- Q lcl|Aclame:pro 138 IDASKVTVYIDDVGLLN-SKTKMWYVVNT--GG--------QQRVLKPEEILHFKNG---------------ITL----- 186 (432) Q Consensus 138 ~~~~~v~~~~~~~~~~~-~~~~~~~~~~~--~~--------~~~~~~~~~vih~~~~---------------~~~----- 186 (432) ++|..+-++.++..... .....+|.... ++ ....+.++.+.+++.. +.. T Consensus 140 i~p~~~~~vydd~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPv 219 (451) T protein:vir:10 140 VNTEEIIPIYRNGIERELEAVIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPF 219 (451) T ss_pred EcccceEEEEcCCCCCceEEEEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeE Confidence 78888877765432111 01111111110 00 0112333333333210 000 Q ss_pred ----CcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCC-CCCHHHHHHHHHHHHHHhcccccccceeecC Q lcl|Aclame:pro 187 ----DGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVG-DLNEDAKKVFRENFESMSSGLQNSHRIALMP 261 (432) Q Consensus 187 ----~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~ 261 (432) +...|.|-+..+...++....+.-...+.++..+.|-.++.--. ..+++.... +.. .+++.+. T Consensus 220 v~~~nn~~~~~d~e~v~~liDa~~~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~----~~~--------~~~i~~~ 287 (451) T protein:vir:10 220 VEFSNNIKKQSDLSKYKKILDLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLKE----LKR--------YKTIKTE 287 (451) T ss_pred EEeccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcccchhhHHH----Hhh--------CCeEEec Confidence 12346777777777777666655555555555566655554321 222222221 111 1122222 Q ss_pred -------CCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHH----------HHHHHHHHHHH Q lcl|Aclame:pro 262 -------VGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQ----------QQQQFYTDTLQ 324 (432) Q Consensus 262 -------~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~----------~~~~~~~~~l~ 324 (432) ++++|..-.. ....+....+...+.|...-++|..--...++.++..... .....+...+. T Consensus 288 ~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~k~~~f~~~l~ 365 (451) T protein:vir:10 288 TDSEGDSGGLKTMQIEI--PTEARKIILEILKKQIYESGQGLQQDTENFGNASGVALKFFYRKLELKSGLLETEFRTSFD 365 (451) T ss_pred CcCCccCCcceEEeecC--CHHHHHHHHHHHHHHHHHHhCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3455544333 3344567788888999999999853221111111111111 12233333444 Q ss_pred HHHHHHHHHHHHhhccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--cceeeecc Q lcl|Aclame:pro 325 ATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAG--GDRLLVNG 402 (432) Q Consensus 325 P~~~~i~~~l~~~ll~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~~~--gd~~~~~~ 402 (432) .+++.|...+. ... ... +.+.+..-...+..+.++.+.++. |+++..-+.+++++-..+. ......-. T Consensus 366 ~~~~li~~~~~-----~~d-~~~--i~i~f~~~~p~n~~e~~~~~~kl~--g~iS~et~~~~~p~v~d~~~e~~~~~ee~ 435 (451) T protein:vir:10 366 KLIKAILYFLG-----VTD-YKK--IQQTYTRNMMSNDLEDADIATKSV--GIIPTKIILRHHPWVDDVEEAEKLYLEEK 435 (451) T ss_pred HHHHHHHHHhC-----CCC-ccc--eeEEecCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHHHHHHHHH Confidence 44444443322 111 122 334446667788999999999884 7898888888886543221 10000000 Q ss_pred ccccccccccccCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 403 NMLPIDMAGQAYLKGGDTNGEVSKEGNE 430 (432) Q Consensus 403 n~~~~~~~~~~~~~gg~~~~~~~~~~~e 430 (432) ...... . .... +.-+| T Consensus 436 ~~~~~~----~-------~~~~-~~~~~ 451 (451) T protein:vir:10 436 KIQASK----V-------SDDY-NNFTE 451 (451) T ss_pred HHHHHH----H-------Hhhc-CCCCC Confidence 000000 0 0000 00001 No 235 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=91.21 E-value=0.017 Score=30.29 Aligned_cols=411 Identities=9% Similarity=0.071 Sum_probs=175.6 Q ss_pred CchHHHHHHhccc---------cccccccccccCCchHH--------------HHHhhcCCcCcc-----cccHHHHhcc Q lcl|Aclame:pro 1 MKIVDSVKKFFNF---------EKRQTSQVIELNKDDEK--------------LLEWLGISPSTI-----SVKGKNALKV 52 (432) Q Consensus 1 Mg~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~--------------~~~~~g~~~~~~-----~v~~~~a~~~ 52 (432) |++++.|+-|... ..+..+.+.+....+.. +..+++...... --+++..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~~~~~~~~~LI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGIDNNISGTKDLINTYRQLTNN 80 (516) T ss_pred CCchHhcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeecccCccccHHHHHHHHHHhhhc Confidence 8887654332110 01111111111111100 001111111110 0124666789 Q ss_pred HHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEE Q lcl|Aclame:pro 53 ATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANI 124 (432) Q Consensus 53 ~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~ 124 (432) |.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|..+ T Consensus 81 pEvd~Av~eIvneaiv~d~~~~pV~l~l~~~e~s~sik~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAVVYEKGHKVVSLDLDDTEFSSSIKDKILEEFDEICR-LLDASRKLDT----LFRRWYIDSRIFFHK 155 (516) T ss_pred cchhHHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHHhhhhcceEEEEE Confidence 999999999998753 223333221110 000000111122222 2334444555 556667789999986 Q ss_pred eeC-CCCceEEEEEEcCcceEEEEcC-----cccee-ccceeEEEec-------ccC------ceEEEccceEEEEecCC Q lcl|Aclame:pro 125 EFD-RKGKVQALWPIDASKVTVYIDD-----VGLLN-SKTKMWYVVN-------TGG------QQRVLKPEEILHFKNGI 184 (432) Q Consensus 125 ~~~-~~g~~~~l~~~~~~~v~~~~~~-----~~~~~-~~~~~~~~~~-------~~~------~~~~~~~~~vih~~~~~ 184 (432) +.+ ...-+.+|..++|..++.++.- .+... .....++.|. .+| ....++.+-|.+...+. T Consensus 156 iid~~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hSGl 235 (516) T protein:vir:10 156 IMPNPKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHSGL 235 (516) T ss_pred EecCcccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeecCc Confidence 655 2344899999999999887532 11110 0111112221 111 23445555555544221 Q ss_pred -CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhc----ccccccce- Q lcl|Aclame:pro 185 -TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSS----GLQNSHRI- 257 (432) Q Consensus 185 -~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----g~~n~g~~- 257 (432) +.+...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+. =..++|.+ T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGev~ 315 (516) T protein:vir:10 236 QDCSDRGIVGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred ccCCCCceeceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 11222224556666666666655555544433333444555555543 333334444433333332 11122221 Q ss_pred -----ee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccccc--ccHHHHH---- Q lcl|Aclame:pro 258 -----AL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATL--NNIEQQQ---- 315 (432) Q Consensus 258 -----~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~--~~~~~~~---- 315 (432) +. + ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+..+. ....+.. T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVTSLPGA-QTMGEMDDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 11 1 246777777532 22223455668889999999999999975443221 2222222 Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhcc-hhhhhhhh--hhh----hhhh-HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 316 --QQFYTDTLQATLTMYEQEMTYKLFLD-----SELDK-GFYSKFNV--DAI----LRAD-IKTRYEAYRTGI--QGGFL 378 (432) Q Consensus 316 --~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~~-~~~~~fd~--~~l----~~~d-~~~~~~~~~~~~--~~g~~ 378 (432) ..|+...=.-+...+.+.|.+.|+.+ .++.. ...+.|++ +.. .... +..|+..+..+- -..++ T Consensus 395 KF~KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 22222222234445555555544332 22211 11233322 221 1111 223444443332 24577 Q ss_pred CHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCC Q lcl|Aclame:pro 379 KPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEV 424 (432) Q Consensus 379 t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~ 424 (432) +.+=||+ .|.+...+ ..++.....- .+.--+..+..++- T Consensus 475 s~~yi~k~ILr~tDeei~~~~k~I~~E~-------~~~~~~~p~~e~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQMTDEQIAQEEKQIEKEA-------NVKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhcCCHhHHHHHHHHHHHhh-------hCCCCCCCCccccC Confidence 7777765 46665432 1121110000 00000000000111 No 236 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=91.11 E-value=0.017 Score=30.22 Aligned_cols=409 Identities=11% Similarity=0.065 Sum_probs=179.0 Q ss_pred CchHHHHHHhcccccc-------------ccccccccCCchH---------------HHHHhhcCCcCcc-----cccHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR-------------QTSQVIELNKDDE---------------KLLEWLGISPSTI-----SVKGK 47 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~---------------~~~~~~g~~~~~~-----~v~~~ 47 (432) |.|- +.++|++..+ ..+...+....+. ....+.|...... --+++ T Consensus 1 m~~~--~l~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~~~~n~~eLI~~YR 78 (521) T protein:vir:10 1 MNPI--FLKLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAPKIQNTKDLINQYR 78 (521) T ss_pred CCcc--hhHHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhccccccchHHHHHHHHH Confidence 6652 2222322221 1111111111111 0011112111100 11246 Q ss_pred HHhccHHHHHHHHHHHHhhcc-----CceEEEeecCCccee---eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 48 NALKVATVFACIKILSESVSK-----LPLKIYQEDEYGIQR---GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGN 119 (432) Q Consensus 48 ~a~~~~~v~~~i~~ia~~ia~-----~~~~~~~~~~~~~~~---~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~ 119 (432) ..+.+|.|..||+.|.+.+.- -|+.+.-.+-+..+. ........+|+ --+....+++ +++.|.+.|. T Consensus 79 ~ma~~pEvd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgR 153 (521) T protein:vir:10 79 SLSKYHEVDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTILK-LLKFEREGKR----HFRRWYVDSR 153 (521) T ss_pred HHhhccchhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeeee Confidence 667899999999999987632 233333322211110 01111222222 2334444555 5666777899 Q ss_pred eEEEEeeCCC---CceEEEEEEcCcceEEEEcC-----ccce-eccceeEEEec--------cc---CceEEEccceEEE Q lcl|Aclame:pro 120 SYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGLL-NSKTKMWYVVN--------TG---GQQRVLKPEEILH 179 (432) Q Consensus 120 ~~~~~~~~~~---g~~~~l~~~~~~~v~~~~~~-----~~~~-~~~~~~~~~~~--------~~---~~~~~~~~~~vih 179 (432) .|..++.+.. .-+.+|..++|..++.++.- .+.. ......++.|. .+ +....++.+.|.| T Consensus 154 i~fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y 233 (521) T protein:vir:10 154 IYFHKMIDPARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVY 233 (521) T ss_pred EEEEEEeeCCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheee Confidence 9998765422 24889999999999776531 1111 01111122221 11 2234577877766 Q ss_pred EecCCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----ccc Q lcl|Aclame:pro 180 FKNGIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQN 253 (432) Q Consensus 180 ~~~~~~-~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n 253 (432) ...+.. .+..+.+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ... T Consensus 234 ~hSGL~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~ 313 (521) T protein:vir:10 234 SHSGKVDIDGKTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSS 313 (521) T ss_pred ecccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEecc Confidence 664432 2456777888888887777766666555443344455555555543 3333344444333333221 011 Q ss_pred ccce------ee------c-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc-cccccHHHH- Q lcl|Aclame:pro 254 SHRI------AL------M-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK-ATLNNIEQQ- 314 (432) Q Consensus 254 ~g~~------~v------l-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~-~~~~~~~~~- 314 (432) +|.+ +. | ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|..... .+.....+- T Consensus 314 TGev~ddrk~msMlEDyWLpRReGgrgTEI~TLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EIt 392 (521) T protein:vir:10 314 TGKVKNSSNNLAMTEDYWLMRRDGKATTEVSTLPGA-QSMGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDIT 392 (521) T ss_pred CceeccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchh Confidence 2221 11 1 246777777532 22333455678889999999999999865421 222111221 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHH---- Q lcl|Aclame:pro 315 -----QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTG---- 372 (432) Q Consensus 315 -----~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~---- 372 (432) +..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+ T Consensus 393 RDEikF~KFI~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~ 472 (521) T protein:vir:10 393 RDELQFTKYIRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAE 472 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCcc Confidence 122222222223333444444443222 2221 112222222221 1111 23344444444 Q ss_pred HhCCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 373 IQGGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 373 ~~~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) +-.-+++.+=||+ .|.+...+ ..++... .+..+.--+ +-++.++| T Consensus 473 yvGky~s~dyi~k~ILr~tDeeik~~~k~I~-------~E~~~~~~~--------~p~~e~~d 520 (521) T protein:vir:10 473 VTGKYLSHEYVMKNILRMSDEDIKTEREKID-------GELKDSVYK--------NPEDPMEE 520 (521) T ss_pred ccccccchHHHHHHHhcCCHhHHHHHHHHHH-------HhhhCCCCC--------CCcchhhc Confidence 2233666666764 45655321 1111100 000000000 01111122 No 237 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=90.36 E-value=0.021 Score=29.75 Aligned_cols=394 Identities=12% Similarity=0.053 Sum_probs=166.5 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCcccccHHHHh----ccHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNAL----KVATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~a~----~~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) +.-|..++.................... ..... -.++.++ -.+++...++.++..+.+-|..+. T Consensus 22 ~~~W~~ird~~~G~~~~~~r~~yl~~~~--------~~~~e--~~Y~~rl~rA~~~n~~~~tl~~l~G~vfrk~p~~~-- 89 (489) T protein:vir:78 22 APKWQKVRHALAGELVSYLRNVGLNEPD--------KAYGE--ARQAEYEAGGIVYNFTRRTLSGMVGSVMRKEPEIN-- 89 (489) T ss_pred HHHHHHHHHHhcCcccccccCCCCCCCC--------CCCCh--HHHHHHHhccccCChHHHHHHHHhchhhcCCccee-- Confidence 3333333333322110000000000000 00000 0011111 245567777777777666665541 Q ss_pred cCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCce-----------EEEEEEcCcceEE Q lcl|Aclame:pro 77 DEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKV-----------QALWPIDASKVTV 145 (432) Q Consensus 77 ~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~-----------~~l~~~~~~~v~~ 145 (432) ....+..++...--...+-.+|.+.++...+.+|-+++.+.....|-. .-+..+.|..|-- T Consensus 90 --------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~rPy~~~~~~~~Iin 161 (489) T protein:vir:78 90 --------IPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLNPTIAFYTTENIVN 161 (489) T ss_pred --------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCCcEEEEechhhhcC Confidence 113355666666677789999999999999999999999887654421 1122233322200 Q ss_pred ----------------------EEcCccceeccc-eeE---------------EEecccCceE-----EEc-----cceE Q lcl|Aclame:pro 146 ----------------------YIDDVGLLNSKT-KMW---------------YVVNTGGQQR-----VLK-----PEEI 177 (432) Q Consensus 146 ----------------------~~~~~~~~~~~~-~~~---------------~~~~~~~~~~-----~~~-----~~~v 177 (432) +.+......... ..+ |....+|... .++ .-.+ T Consensus 162 W~~~~v~G~~~Lt~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~~~~~~~~g~~~l~~ 241 (489) T protein:vir:78 162 WRLTRVGSVNRVTMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDVVEIYPDLGESLRGV 241 (489) T ss_pred ceeeeeCCccceeEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCcccceeeEEeccCCCCccCe Confidence 001000000000 000 0000111100 000 0011 Q ss_pred EEEe--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhccccccc Q lcl|Aclame:pro 178 LHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNSH 255 (432) Q Consensus 178 ih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g 255 (432) |=|. +....+...+.+|+..++..-..+....--....+...+.|..++.--...+++..+.... ....-|+ + T Consensus 242 IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~~l~~~~~P~l~i~G~d~~~~~~~~~~~~--~~i~~g~---~ 316 (489) T protein:vir:78 242 IPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSADNEESSFVVGQPTLFIYPGENLTPQAFKEANP--NGIKFGS---R 316 (489) T ss_pred eeEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhHHHHHHHHcccceeeeecCccCCcccccccCc--cceeeCC---c Confidence 1111 1122334567888877766654444444445556667788888887544444443332221 1112232 2 Q ss_pred ceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 256 RIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMT 335 (432) Q Consensus 256 ~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~ 335 (432) ..+.++.+-++.-+..++..+. .+.++....+.+ ..| ..++.- ...-.+........--.+.|.-++..+++.++ T Consensus 317 ~~~~lp~~~~~~~ie~~~~~~~-r~~l~~le~qm~-~lG--a~l~~~-~~~~Ta~~~~~~~~~~~S~L~~~a~~~e~al~ 391 (489) T protein:vir:78 317 RGHNLGYGGSAQLIQAGENNLA-RQNMLDKEQQAI-QIG--AQLITP-TQQITAQSARIQRGADTSVMATIARNVSQAYT 391 (489) T ss_pred ccccCCCCCCcceeccCcchHH-HHHHHHHHHHHH-HHh--hhhccC-CcchhHHHHHHHHHHhhHHHHHHHHHHHHHHH Confidence 3456665554444444333332 122222222211 112 122221 11111222233344456677788888888887 Q ss_pred Hhhccchhh-----cchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC---CCcceeeeccccccc Q lcl|Aclame:pro 336 YKLFLDSEL-----DKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE---AGGDRLLVNGNMLPI 407 (432) Q Consensus 336 ~~ll~~~~~-----~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~---~~gd~~~~~~n~~~~ 407 (432) ..+-.-..+ .....|....+-....-.....+.+.++++.|.++....++.+-.-.+ ++-+.. ..+ T Consensus 392 ~~l~~~a~w~G~~~~~~~~i~~n~dF~~~~~d~~~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~~e~~~------~ei 465 (489) T protein:vir:78 392 DALRWVAVMLGKPEDTEVEFRLNMDFFLEPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDADIK------DAV 465 (489) T ss_pred HHHHHHHHHcCCCCCCceEEEeecccCcccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHHH------HHH Confidence 654111111 011112112221111112334667777889999999988877643222 111100 000 Q ss_pred cccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 408 DMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 408 ~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) ..++.+.|++..++-++++.+.. T Consensus 466 --~~~~~~~~~~~~g~~~~~~q~~~ 488 (489) T protein:vir:78 466 --ADQPLPVATEVQGEIPQSAQQQE 488 (489) T ss_pred --hhcCCCcccCCcccCCCCccccc Confidence 01112223333333333333333 No 238 >protein:vir:103177 Length: 533 # NCBI annotation: gp131 # Family: family:all:1036 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717798;genbank:gi:113200635;genbank:GeneID:4239186 Probab=88.93 E-value=0.029 Score=28.99 Aligned_cols=422 Identities=12% Similarity=0.145 Sum_probs=174.0 Q ss_pred CchHHHHHHhccccccccc-----cccccCCchHH-HH-H-hhcCCcC---cc------cccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTS-----QVIELNKDDEK-LL-E-WLGISPS---TI------SVKGKNALKVATVFACIKILS 63 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-~~-~-~~g~~~~---~~------~v~~~~a~~~~~v~~~i~~ia 63 (432) |+= |.++- ..+...+ ...+....+.. +. . ..|...+ .. --+++..+.+|.|.+||+.|. T Consensus 1 m~~---lfg~~-i~~~~~~~~~~s~~~~~~~dg~~~i~~~~~~~~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIV 76 (533) T protein:vir:10 1 MSQ---LFGFS-LERAKKAPKGPSFVQKDNLDGSQPVSGGGYYGYTVDFDGQVRNEYQLISRYREMVLQPECDSAVDDIV 76 (533) T ss_pred Ccc---ccccc-cccccccccCCCCCCCCcccccceeecccccceeeecccccchHHHHHHHHHHHhhccchhhHHHHhh Confidence 442 21111 1111111 11111111100 00 0 0111000 00 012466678999999999999 Q ss_pred Hhhcc-----CceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC---Cce Q lcl|Aclame:pro 64 ESVSK-----LPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK---GKV 132 (432) Q Consensus 64 ~~ia~-----~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~---g~~ 132 (432) +.+.- -|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|..++.+.. .-+ T Consensus 77 neaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~-ll~F~~~~~e----~fR~WYVDgRi~fHkiid~~~pk~GI 151 (533) T protein:vir:10 77 NETICGNFDDVPVSVELSNLKVSDKIKKLIREEFGEILR-LLDFENRSYE----IFRRWYVDGRLFYHKVIDPDNPQGGL 151 (533) T ss_pred cceeeecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEEEEEecCCCccccc Confidence 87632 23333222111 000001111122222 2334444555 56667778999998766532 348 Q ss_pred EEEEEEcCcceEEEEcC-----ccc--------eeccceeEEEeccc------CceEEEccceEEEEecCC-CCCccccc Q lcl|Aclame:pro 133 QALWPIDASKVTVYIDD-----VGL--------LNSKTKMWYVVNTG------GQQRVLKPEEILHFKNGI-TLDGLVGV 192 (432) Q Consensus 133 ~~l~~~~~~~v~~~~~~-----~~~--------~~~~~~~~~~~~~~------~~~~~~~~~~vih~~~~~-~~~~~~G~ 192 (432) .+|..++|..++.++.. ... .......|+.+... +....++.+-|.+...+. +.+...-+ T Consensus 152 ~ELr~lDPr~i~~vr~i~~~~~~~~~~~~~~~~v~~~~~eyf~Ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~~~i~ 231 (533) T protein:vir:10 152 IELRYIDPRKIRKINETEQKRPEQLRGLPLNQQLSPKSAEYFLYDPKGLKNSTTQGLKIAPDSICYVHSGIMDLNKNMTL 231 (533) T ss_pred eeeeeccccceeeeeeeeccCCCccceeecchhhhccceeeeeeccccccccCCCceecchhheeeeeccceeCCCCcee Confidence 89999999999986532 111 12222334444433 334557775555554332 22222334 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----cccccce------ee-c Q lcl|Aclame:pro 193 PTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSHRI------AL-M 260 (432) Q Consensus 193 s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g~~------~v-l 260 (432) |-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.. ...+|.+ +. + T Consensus 232 syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMl 311 (533) T protein:vir:10 232 SHLHKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSML 311 (533) T ss_pred ccchHhHHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhH Confidence 667777776666655555544443333444555555543 3333344444444333321 0112221 11 1 Q ss_pred ----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHH------HHHHHHHHH Q lcl|Aclame:pro 261 ----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQ------QQFYTDTLQ 324 (432) Q Consensus 261 ----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~------~~~~~~~l~ 324 (432) ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|...+..+.....+-. ..|+...=. T Consensus 312 EDyWLPRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~ 390 (533) T protein:vir:10 312 EDFWLPRREGGRGTEITTLPGG-QNLGELEDVKYFQKKLYKSLNVPGSRLETETTFNVGRAAEITRDEVKFQKFVARLRK 390 (533) T ss_pred hhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHH Confidence 246777777532 223334556788899999999999999654443333322222 222222222 Q ss_pred HHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHH--HhCCCcCHHHHHH-HhC Q lcl|Aclame:pro 325 ATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTG--IQGGFLKPNEARS-KED 388 (432) Q Consensus 325 P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~--~~~g~~t~nE~R~-~~g 388 (432) -+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+ +-.-+++.+=+|+ .|. T Consensus 391 rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi~k~ILr 470 (533) T protein:vir:10 391 RFSELFTDLLKTQLVLKGVISIEEWDQMKEHIQYDYIADNYFAELKEIEIRNERMNQVATMDPFVGKYFSVEYMRRQVLK 470 (533) T ss_pred HHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhc Confidence 23333444444443222 2221 112222222221 1111 12233333332 1122335554443 233 Q ss_pred CCCCC----------Ccce-eee-c-ccccccccccccc---CCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 389 LPPEA----------GGDR-LLV-N-GNMLPIDMAGQAY---LKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 389 l~p~~----------~gd~-~~~-~-~n~~~~~~~~~~~---~~gg~~~~~~~~~~~e~~ 432 (432) +...+ +.+. ++. | ..+.|......+. ..+++...+.+.+..|-- T Consensus 471 ~tDeei~~~~kqI~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (533) T protein:vir:10 471 QTDVEMKEIDKQIESEMESGIIADPAAEMDPAMAAGDPDAGGAPAEEVAPEGPDPSDERK 530 (533) T ss_pred cCHHHHHHHHHHHHHHHhCCCCCCCcchhhHHhcCCCCCcCCcccccCCCCCCCcchhhc Confidence 33210 0000 000 0 0111111111111 111222223333222222 No 239 >protein:vir:81017 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469501;genbank:gi:157311458;genbank:GeneID:5602316 Probab=88.89 E-value=0.03 Score=28.97 Aligned_cols=411 Identities=8% Similarity=0.066 Sum_probs=173.2 Q ss_pred CchHHHHHHhcccccc---------ccccccccCCchHHHH---------HhhcCCcCccc------------ccHHHHh Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKR---------QTSQVIELNKDDEKLL---------EWLGISPSTIS------------VKGKNAL 50 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~---------~~~g~~~~~~~------------v~~~~a~ 50 (432) ...++.++.|+++... ..+.+.+....+.... .+.|-...... -+++..+ T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~P~~~dGa~~i~~~~~~~~~~~gg~~~~~~~~e~~~~~~~eLI~~YR~ma 81 (521) T protein:vir:81 2 FSRLKMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNLPASAWNSLTQQFYSTDQKISTTKQLVNTYRGLM 81 (521) T ss_pred cchhhhhHhhcCchhhhHHhhhccCccccccCCCCCCceEecccCCCcceeecceeeeecccccchhhHHHHHHHHHHHh Confidence 2333344444443321 1111111111111000 00000000000 1145667 Q ss_pred ccHHHHHHHHHHHHhhc-----cCceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEE Q lcl|Aclame:pro 51 KVATVFACIKILSESVS-----KLPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYA 122 (432) Q Consensus 51 ~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~ 122 (432) .+|.|..||+.|.+.+. .-|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.|..|. T Consensus 82 ~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDgRi~f 156 (521) T protein:vir:81 82 NNHEVENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLN-TIQFDRRGQD----MFRRWYVDSRIFF 156 (521) T ss_pred hccchhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhhhhcceEEE Confidence 89999999999998763 223333221111 000001111122222 2334444555 5666777899999 Q ss_pred EEeeCCC--CceEEEEEEcCcceEEEEcCcc------ceeccceeEEEecc-------------cCceEEEccceEEEEe Q lcl|Aclame:pro 123 NIEFDRK--GKVQALWPIDASKVTVYIDDVG------LLNSKTKMWYVVNT-------------GGQQRVLKPEEILHFK 181 (432) Q Consensus 123 ~~~~~~~--g~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~-------------~~~~~~~~~~~vih~~ 181 (432) .++.+.+ .-+.+|..++|..++.++.-.. ........++.|.. .+....++.+-|.+.. T Consensus 157 hkiid~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~h 236 (521) T protein:vir:81 157 HKIIGKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAH 236 (521) T ss_pred EEEEcCCccccceeeeeeCCcceeeeeeecccccCccceecceeeeeeeecCCccccccceeecCCcceeechhheeeee Confidence 8885433 4488999999999988763211 11111222222222 1223445665555554 Q ss_pred cCC-CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc----ccccc Q lcl|Aclame:pro 182 NGI-TLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG----LQNSH 255 (432) Q Consensus 182 ~~~-~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g----~~n~g 255 (432) .+. +.+...-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- ...+| T Consensus 237 SGl~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~im~k~kNklvYDa~TG 316 (521) T protein:vir:81 237 SGLMDCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTG 316 (521) T ss_pred ccceeCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccc Confidence 332 12222334667777776666665555544443334444555555543 3333444444444443321 11122 Q ss_pred ------ceee-c----------CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc--ccccHHH--- Q lcl|Aclame:pro 256 ------RIAL-M----------PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA--TLNNIEQ--- 313 (432) Q Consensus 256 ------~~~v-l----------~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~--~~~~~~~--- 313 (432) +.+. + ..|+++++|.-- ..+.-++-.++..+.+..+++||.+-|...+.+ +.....+ T Consensus 317 ev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItR 395 (521) T protein:vir:81 317 KLKNQQANLSMTEDYWLQRRDGKAITDVTTLPGA-SGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITR 395 (521) T ss_pred cccccccccchhhhhcccccCCCcccceeecccC-CCCChHHHHHHHHHHHHHHhCCccccccCCCCcceeccccchhhH Confidence 2211 1 246777777531 222233556688899999999999999543322 2112222 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhccchhhcch--------hhhhhhhhhh----hhhh-HHHHHHHHHHHHh--C Q lcl|Aclame:pro 314 ---QQQQFYTDTLQATLTMYEQEMTYKLFLDSELDKG--------FYSKFNVDAI----LRAD-IKTRYEAYRTGIQ--G 375 (432) Q Consensus 314 ---~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~~~~~--------~~~~fd~~~l----~~~d-~~~~~~~~~~~~~--~ 375 (432) -+..|+...=.-+...+.+.|.+.|+.+.-.... +++.|..+.. .... +..|+..+..+-. . T Consensus 396 DEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvG 475 (521) T protein:vir:81 396 DELEFSKFIRTRQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIG 475 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhhhhhc Confidence 1222332222234444444444444332221111 2223322221 1111 1223333333211 2 Q ss_pred CCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 376 GFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 376 g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) -+++.+=||+ .|.+...+ ..++.. .. ..+.+-- ..-+.++++ T Consensus 476 ky~s~dyi~k~ILr~tDeei~~~~k~I--------~~----E~~~~~~---~~p~~~~~~ 520 (521) T protein:vir:81 476 KYFSNQTVMRDILKYTDDQMDTEKKQI--------EE----EANDPRF---KQTPDEIED 520 (521) T ss_pred cccchHHHHHHHhccCHHHHHHHHHHH--------HH----HhhCCCC---CCCcccccC Confidence 2445555654 34543321 111100 00 0000000 001111222 No 240 >protein:vir:95149 Length: 501 # NCBI annotation: hypothetical protein ORF007 # Family: family:all:584 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293414;genbank:gi:148912835;genbank:GeneID:5228224 Probab=85.56 E-value=0.052 Score=27.63 Aligned_cols=393 Identities=11% Similarity=0.037 Sum_probs=151.7 Q ss_pred Cc--------------hHHHHHHhcccccc---ccccccccCCchHHHHHhhcCCcCcc-cccHHHHhc----cHHHHHH Q lcl|Aclame:pro 1 MK--------------IVDSVKKFFNFEKR---QTSQVIELNKDDEKLLEWLGISPSTI-SVKGKNALK----VATVFAC 58 (432) Q Consensus 1 Mg--------------~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~-~v~~~~a~~----~~~v~~~ 58 (432) |- -|..++........ +.....+.... -..+.. .-.++..++ .+++... T Consensus 1 m~~V~~~hp~y~~~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~---------e~~~~e~~~~Y~~rl~rA~~~n~~~~t 71 (501) T protein:vir:95 1 MPNVSFIRPELGKLLPLYYLIRDAIAGEPTVKGARTTYLPMPNA---------EDQSKENKARYEAYLKRAVFYNVARRT 71 (501) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCcCCCC---------CCCcccchHHHHHHhhccccCchHHHH Confidence 22 22222222211110 00000000000 000000 000122222 3445555 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCC-c---e-- Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKG-K---V-- 132 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g-~---~-- 132 (432) ++.+...+.+-+..+. ....+..++...--...+-.+|++.++...+.+|-+++.+.....+ . . T Consensus 72 ~~~l~G~vf~k~p~~~----------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~t~a 141 (501) T protein:vir:95 72 LFGLVGQVFMRDPVVK----------VPALLNPLVANATGSGINLTQLAKRAVSLNLAYSRAGLLVDYPTTEAEGGASIA 141 (501) T ss_pred HHHHhhhhhcCCccee----------CcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccccHH Confidence 5555555544444331 1133455565555666799999999999999999999998754321 1 0 Q ss_pred --------EEEEEEcCcceE----------------------EEEcCccceecc-----------cee-EEEecc--cC- Q lcl|Aclame:pro 133 --------QALWPIDASKVT----------------------VYIDDVGLLNSK-----------TKM-WYVVNT--GG- 167 (432) Q Consensus 133 --------~~l~~~~~~~v~----------------------~~~~~~~~~~~~-----------~~~-~~~~~~--~~- 167 (432) .-+..+.|..|- ...++.+-.... +.+ +..+.. .+ T Consensus 142 ~~~~~~~rPy~~~~~~~~IinW~~~~v~g~~~l~~v~l~E~~~~~d~~f~~~~~~q~RvL~~~~~g~~~~~v~r~~~~~~ 221 (501) T protein:vir:95 142 DLEAGRIRPTLYVYSPTEIINWRTTDRGAEEVLSLVVLFETWCAADDGFEMKTSGQFRVLRLDEEGYYVHEIWREPQPTK 221 (501) T ss_pred HHHhccCCcEEEEecHhhhcCcceeccCCceeeeEEEEEEEEeecCCCcccceeEEEEEEeeCCCceEEEEEEEecCCcc Confidence 112222322210 001110000000 000 000000 00 Q ss_pred ---------ce----EEEc------cce---EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 168 ---------QQ----RVLK------PEE---ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 168 ---------~~----~~~~------~~~---vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) .. ...+ .-. ++++ +....+...+.+|+..++..-..+...+.-....+...+.|..+ T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~l~~IPfv~~-~~~~~~~~~~~pPLl~lA~lni~hy~~ssd~~~~l~~~~~P~l~ 300 (501) T protein:vir:95 222 ADGSKIPKGNYQQYVVYKPTDAQGKRLTEIPFMFI-GSENNDSNPDNPNFYDLASLNMAHYRNSADYEESCYIVGQPTPV 300 (501) T ss_pred cCcceecCCcccccceeeeeccCCCcCCeeeEEEE-ecCCCCCCCCccchHHHHHHHHHHHhhhhHHHHHHHHcccceee Confidence 00 0000 001 1222 12233345567887766655333333333334445566777777 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccc Q lcl|Aclame:pro 226 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSK 305 (432) Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~ 305 (432) ++--.. +..+.... ....-|+ ...+.++.|.++.-+..++.-+. .+.++....++.. .| ..++..... T Consensus 301 i~G~~~---~~~~~~~~--~~i~~G~---~~~~~lP~~~~~~~ie~~~~~i~-~~~l~~l~~~m~~-~G--a~ll~~~~~ 368 (501) T protein:vir:95 301 LIGLTE---EWVTNVLK--GSVNFGS---RGGIPLPVGADAKLLQASENTML-KEAMDTKERQMVA-LG--AKLVEQKEV 368 (501) T ss_pred eeCCcc---cccccCCC--Cceeecc---cccccCCCCCceeEEecChhhHH-HHHHHHHHHHHHH-HH--HhhccCCcc Confidence 753222 11110000 0111233 23456666655544444443332 2333333333322 23 122322111 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh----hcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHH Q lcl|Aclame:pro 306 ATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLFLDSE----LDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPN 381 (432) Q Consensus 306 ~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll~~~~----~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~n 381 (432) ...+........--...|.-++..+++.++..+-.-.. ...+..|.+..+-.........++++.+++..|.++.. T Consensus 369 ~~Ta~~~~~~~~~~~S~L~~~a~~le~al~~~l~~~a~w~g~~~~~~~v~i~~df~~~~~~~~~~~al~~~~~~G~is~~ 448 (501) T protein:vir:95 369 QRTATEAELEAASEGSTLSSATKNVSAAFEWALKWAARWVGQADSGVKFELNTDFDIARMTPDERRSLVEEWQKGAITFE 448 (501) T ss_pred chhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecccccccCCHHHHHHHHHHHhCCCCcHH Confidence 11122222333334556777788888887665411111 01223344443333333334446677788999999999 Q ss_pred HHHHHh---CCCCCCCcc--eee--ecccccccccc--ccccCCCCCCCCCCC Q lcl|Aclame:pro 382 EARSKE---DLPPEAGGD--RLL--VNGNMLPIDMA--GQAYLKGGDTNGEVS 425 (432) Q Consensus 382 E~R~~~---gl~p~~~gd--~~~--~~~n~~~~~~~--~~~~~~gg~~~~~~~ 425 (432) ..++.+ |+.+.+--+ +.. ...+..+.+.+ +..+..||++=+..+ T Consensus 449 t~~~~L~~~~v~~~~~~~e~e~i~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~ 501 (501) T protein:vir:95 449 EMRTGLRKAGVATEDDSKAKEKIAKDTAEAMALATPANVPGDGSGGDNVGNSE 501 (501) T ss_pred HHHHHHHhCCCCChhHHHHHHHHHhhhcCcccccccCCCCCCCcccccccCCC Confidence 998776 444321100 000 00011000000 001111222211111 No 241 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=85.29 E-value=0.054 Score=27.54 Aligned_cols=398 Identities=10% Similarity=-0.020 Sum_probs=152.4 Q ss_pred Cc--------------hHHHHHHhcccccccccc-ccccCCchHHHHHhhcCCcCcc-cccHHHHh----ccHHHHHHHH Q lcl|Aclame:pro 1 MK--------------IVDSVKKFFNFEKRQTSQ-VIELNKDDEKLLEWLGISPSTI-SVKGKNAL----KVATVFACIK 60 (432) Q Consensus 1 Mg--------------~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-~v~~~~a~----~~~~v~~~i~ 60 (432) |. -|..++........-+.. ...... +-+-..+.. .-.++..+ -.+++...++ T Consensus 32 m~dV~~~hp~y~a~~~~W~~ird~~~G~~~~r~~g~~YLP~-------~~~~~~~~E~~~~Y~~rl~rA~~~n~~~~tl~ 104 (535) T protein:vir:80 32 LPNVGYQRVEFGEMLPKWRKIMDCLSGQEAIKAKREEYLPM-------PSVDSRDEEQRRRYETYLQRAIFYNVTARTLD 104 (535) T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCCC-------CCcccCCcCCHHHHHHHHhhccCCChhHHHHH Confidence 22 222222222211000000 000000 000000000 00012222 2345566666 Q ss_pred HHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCceE------- Q lcl|Aclame:pro 61 ILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQ------- 133 (432) Q Consensus 61 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~~~------- 133 (432) .++..+.+-+..+ .....+..++...--...+-.+|++.++...+.+|-+++.+.....|... T Consensus 105 ~l~G~vfrk~p~~----------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~iLVD~P~~~~~~t~ade~~ 174 (535) T protein:vir:80 105 GMMGQVFSRDPIR----------QLPPALEAIVEDIDGEGVSLDQQAKKALGYTMGFGRAAIFTDYPNVGRPVTVLEQKL 174 (535) T ss_pred HHhchhhcCCcce----------eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccHHHHHh Confidence 6665555444332 11134555665556666799999999999999999999999765444211 Q ss_pred -----EEEEEcCcce----------------------EEEEcCccceeccc---------------eeEEEecccCc--- Q lcl|Aclame:pro 134 -----ALWPIDASKV----------------------TVYIDDVGLLNSKT---------------KMWYVVNTGGQ--- 168 (432) Q Consensus 134 -----~l~~~~~~~v----------------------~~~~~~~~~~~~~~---------------~~~~~~~~~~~--- 168 (432) -+..+.|..| ....++.+-..... ..+.....++. T Consensus 175 ~~~rPy~~~y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~~q~RvL~~~~~G~y~v~~~~~~~~~~~~~~ 254 (535) T protein:vir:80 175 GLYRPTITLVHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYVQQWRVLQLNAEGNYQVERWRRETQEEMYYS 254 (535) T ss_pred cCCCcEEEEechhhccCccccccCCccceeEEEEEEEEEecCCCcccceeEEEEEEEecCCceEEEEEEEeecCCccccc Confidence 1111111111 00111110000000 00000000000 Q ss_pred -eEEEccc------e---EEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHH Q lcl|Aclame:pro 169 -QRVLKPE------E---ILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) Q Consensus 169 -~~~~~~~------~---vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 238 (432) ...++.+ . ++++- ....+...|.+|+..++..-..+....--....+...+.|..+++--....++... T Consensus 255 ~~~~~~~~~g~~~l~~IPfv~~~-~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~il~~~~~P~l~i~G~~~~~~~~~~ 333 (535) T protein:vir:80 255 YSKHVPTDGNGNPFKEIPFQFIG-PLDNNADIDHPPLLDLCEVNIGHYRNSADYEEMAFVAGQPTAFFTGLTKDWVEDVF 333 (535) T ss_pred cceeecccCCCcccCeeEEEEee-cCCCCCCCCccchHHHHHHHHHHhhchhHHHHHHHHhcCceeeeecCchhhhhcCC Confidence 0011111 1 22221 22334557788877666654444444433445555667887777633322111100 Q ss_pred HHHHHHHHHhcccccccceeecCCCc--eeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHH Q lcl|Aclame:pro 239 VFRENFESMSSGLQNSHRIALMPVGY--QFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) Q Consensus 239 ~~~~~~~~~~~g~~n~g~~~vl~~g~--~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~ 316 (432) + -....-|+ ..++.++.|. +|.+++-+....+.++.++.....+...+-+. .....+ ++...... T Consensus 334 ~----~~~i~iG~---~~~~~lP~~~~~~~~e~~~~~~a~~~l~~~e~qM~~lGa~ll~~-----~~~~~T-a~~a~~~~ 400 (535) T protein:vir:80 334 K----DFKVHLGS---RAIIPLPQGATAGILQITPNSVPFEAMTHKESQMIAMGANLLVK-----SGGNRT-FGEAQQEE 400 (535) T ss_pred C----CcceEecC---cccccCCCCCCcceeeeccchhHHHHHHHHHHHHHHHHHHhhcc-----Cccccc-HHHHHHHH Confidence 0 00012233 2345666554 44444433333333333333333322222111 111111 11111222 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhc------chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh--- Q lcl|Aclame:pro 317 QFYTDTLQATLTMYEQEMTYKLFLDSELD------KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE--- 387 (432) Q Consensus 317 ~~~~~~l~P~~~~i~~~l~~~ll~~~~~~------~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~--- 387 (432) .--...|.-++..+++.++..+-....+. ....|....+-............+-++++.|.|+....++.+ T Consensus 401 ~~~~S~L~~~a~~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~~~~all~~~~~G~Is~et~~~~L~r~ 480 (535) T protein:vir:80 401 ASEQSILSACTKNVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPNERAELILEWQQGAITFKEMRAGLRRA 480 (535) T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhC Confidence 22245677777888888765542111110 112223222222222222345667788889999998888776 Q ss_pred CCC-C-CCCccee-eecc---ccccc-------cccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 388 DLP-P-EAGGDRL-LVNG---NMLPI-------DMAGQAYLKGGDTNGEVSKEGN 429 (432) Q Consensus 388 gl~-p-~~~gd~~-~~~~---n~~~~-------~~~~~~~~~gg~~~~~~~~~~~ 429 (432) |.- | +++-++. .+.. +..+. ..-+++..+-.+.++...+.++ T Consensus 481 gvl~~~~~~eee~~ri~~E~~~~~~~~g~~~d~~~~g~~~~~~~~~~~~~~~~~~ 535 (535) T protein:vir:80 481 GVASEDDAKAETEGKATVEFIAKTAAAGKVGDAASGGTNKAKLNNGNGGGNQAGN 535 (535) T ss_pred CCCCcccchHHHHHHHHhhhhhccccCCCCCCCCCCCCCcCcccCCccccccCCC Confidence 332 1 2221111 0000 00000 0001111111112222222222 No 242 >protein:vir:7208 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049782;genbank:gi:9632594;genbank:GeneID:1258582 Probab=83.20 E-value=0.07 Score=26.90 Aligned_cols=410 Identities=9% Similarity=0.079 Sum_probs=171.7 Q ss_pred Cch--HHHHHHhccccc----------cccccccccCCchH----------------HHHHhhcCCcCcc------cccH Q lcl|Aclame:pro 1 MKI--VDSVKKFFNFEK----------RQTSQVIELNKDDE----------------KLLEWLGISPSTI------SVKG 46 (432) Q Consensus 1 Mg~--~~~l~~~~~~~~----------~~~~~~~~~~~~~~----------------~~~~~~g~~~~~~------~v~~ 46 (432) |.| ++.|+. |.... +..+.+.+....+. ....++|...+.. --++ T Consensus 1 m~~~~L~~~~~-w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~Y 79 (524) T protein:vir:72 1 MKFNVLSLFAP-WAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTY 79 (524) T ss_pred CCCchhhHhhc-cccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHH Confidence 877 444333 22111 11112222221110 0111122111100 0124 Q ss_pred HHHhccHHHHHHHHHHHHhhc-----cCceEEEeecCCc---ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 47 KNALKVATVFACIKILSESVS-----KLPLKIYQEDEYG---IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYG 118 (432) Q Consensus 47 ~~a~~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~~---~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G 118 (432) +..+.+|.|..||+.|.+.+. .-|+.+.-.+-+. .+........++|+ --+....+++ +++.|.+.| T Consensus 80 R~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDg 154 (524) T protein:vir:72 80 RNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLN-HLSFQRKGSD----HFRRWYVDS 154 (524) T ss_pred HHHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeee Confidence 666789999999999998763 2233333221110 00001111222222 2334444445 566677789 Q ss_pred CeEEEEeeCCC---CceEEEEEEcCcceEEEEcC-----cc-ceeccceeEEEec-------cc------CceEEEccce Q lcl|Aclame:pro 119 NSYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VG-LLNSKTKMWYVVN-------TG------GQQRVLKPEE 176 (432) Q Consensus 119 ~~~~~~~~~~~---g~~~~l~~~~~~~v~~~~~~-----~~-~~~~~~~~~~~~~-------~~------~~~~~~~~~~ 176 (432) ..|..++.+.. .-+.+|..++|..++.++.- .+ ........+|.|. .+ +....++.+- T Consensus 155 Ri~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dA 234 (524) T protein:vir:72 155 RIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAA 234 (524) T ss_pred EEEEEEEEeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhh Confidence 99998876533 24889999999999775421 11 1111111122222 11 2345566666 Q ss_pred EEEEecCCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc---- Q lcl|Aclame:pro 177 ILHFKNGIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG---- 250 (432) Q Consensus 177 vih~~~~~~-~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g---- 250 (432) |.|...+.. .++..-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- T Consensus 235 I~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvY 314 (524) T protein:vir:72 235 VVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVY 314 (524) T ss_pred eeeeeccceeCCCCceeccchhhhHhHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEE Confidence 666653322 2222344666777666666655555544433333444555555543 3333344444433333321 Q ss_pred cccccce------ee------c-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc--ccccccH Q lcl|Aclame:pro 251 LQNSHRI------AL------M-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS--KATLNNI 311 (432) Q Consensus 251 ~~n~g~~------~v------l-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~--~~~~~~~ 311 (432) ..++|.+ +. | ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|.... ..+.... T Consensus 315 Da~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~ 393 (524) T protein:vir:72 315 DASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSG 393 (524) T ss_pred eCCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCcccccccc Confidence 1122222 11 1 246777776532 2222345567888999999999999994322 1222222 Q ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHH Q lcl|Aclame:pro 312 EQQQ------QQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTG 372 (432) Q Consensus 312 ~~~~------~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~ 372 (432) .+-. ..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+ T Consensus 394 ~EItRDEikF~KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:72 394 TSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMA 473 (524) T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 2221 22222222223334444444443322 2221 112222322221 1111 12333333333 Q ss_pred Hh--CCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 373 IQ--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 373 ~~--~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) -. .-+++.+=||+ .|.+...+ ..++..... ..+.--+ +.+ ..++| T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E-------~k~~~~~--~~~------~~~~~ 523 (524) T protein:vir:72 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEE-------SKEARFQ--DPD------QEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHHHHHHH-------hhcCCCC--CCc------hhhhc Confidence 11 22446665654 35554321 111110000 0000000 000 00001 No 243 >protein:vir:103458 Length: 524 # NCBI annotation: portal vertex of the head # Family: family:all:1036 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803110;genbank:gi:116326390;genbank:GeneID:4405487 Probab=82.89 E-value=0.073 Score=26.81 Aligned_cols=410 Identities=9% Similarity=0.083 Sum_probs=171.6 Q ss_pred Cch--HHHHHHhccccc----------cccccccccCCchH----------------HHHHhhcCCcCcc------cccH Q lcl|Aclame:pro 1 MKI--VDSVKKFFNFEK----------RQTSQVIELNKDDE----------------KLLEWLGISPSTI------SVKG 46 (432) Q Consensus 1 Mg~--~~~l~~~~~~~~----------~~~~~~~~~~~~~~----------------~~~~~~g~~~~~~------~v~~ 46 (432) |.| ++.|+. |.... +..+.+.+....+. ....++|...+.. --++ T Consensus 1 m~~~~L~~~~~-w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~Y 79 (524) T protein:vir:10 1 MKFNVLSLFAP-WAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTY 79 (524) T ss_pred CCCchhhHhhc-cccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHH Confidence 877 444332 22111 11112222221110 0111122111100 0124 Q ss_pred HHHhccHHHHHHHHHHHHhhc-----cCceEEEeecCCc---ceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 47 KNALKVATVFACIKILSESVS-----KLPLKIYQEDEYG---IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYG 118 (432) Q Consensus 47 ~~a~~~~~v~~~i~~ia~~ia-----~~~~~~~~~~~~~---~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G 118 (432) +..+.+|.|..||+.|.+.+. .-|+.+.-.+-+. .+........++|+ --+....+++ +++.|.+.| T Consensus 80 R~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDg 154 (524) T protein:vir:10 80 RNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFNDVLN-HLSFQRKGSD----HFRRWYVDS 154 (524) T ss_pred HHHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHHH-HhccchhhhH----HHhhheeee Confidence 666789999999999998763 2233333221110 00001111222222 2233444444 566677889 Q ss_pred CeEEEEeeCCC---CceEEEEEEcCcceEEEEcC-----cc-ceeccceeEEEec-------cc------CceEEEccce Q lcl|Aclame:pro 119 NSYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VG-LLNSKTKMWYVVN-------TG------GQQRVLKPEE 176 (432) Q Consensus 119 ~~~~~~~~~~~---g~~~~l~~~~~~~v~~~~~~-----~~-~~~~~~~~~~~~~-------~~------~~~~~~~~~~ 176 (432) ..|..++.+.. .-+.+|..++|..++.++.- .+ ........+|.|. .+ +....++.+- T Consensus 155 Ri~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dA 234 (524) T protein:vir:10 155 RIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAA 234 (524) T ss_pred EEEEEEEeeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhh Confidence 99998876532 24889999999999775421 11 1111111122222 11 2345566666 Q ss_pred EEEEecCCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc---- Q lcl|Aclame:pro 177 ILHFKNGIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG---- 250 (432) Q Consensus 177 vih~~~~~~-~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g---- 250 (432) |.|...+.. .++..-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- T Consensus 235 I~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvY 314 (524) T protein:vir:10 235 IVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVY 314 (524) T ss_pred eeeeeccceeCCCCceeccchhhhHHHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEE Confidence 666653322 2222344666777666666655555544433333444555555543 3333344444433333321 Q ss_pred cccccce------ee------c-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc--ccccccH Q lcl|Aclame:pro 251 LQNSHRI------AL------M-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS--KATLNNI 311 (432) Q Consensus 251 ~~n~g~~------~v------l-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~--~~~~~~~ 311 (432) ..++|.+ +. | ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|.... ..+.... T Consensus 315 Da~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~ 393 (524) T protein:vir:10 315 DASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRQALYMALRVPLSRIPQDQQGGVMFDSG 393 (524) T ss_pred eCCCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCchhhcCCCCCcccccccc Confidence 1122222 11 1 246777776532 2222345566888999999999999994322 1222222 Q ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHH Q lcl|Aclame:pro 312 EQQQ------QQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTG 372 (432) Q Consensus 312 ~~~~------~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~ 372 (432) .+-. ..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+ T Consensus 394 ~EItRDEikF~KFI~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:10 394 TSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFTELKEAEILERRINMLTMA 473 (524) T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 2221 22222222223334444444443322 2221 112222322221 1111 12333333333 Q ss_pred Hh--CCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 373 IQ--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 373 ~~--~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) -. .-+++.+=||+ .|.+...+ ..++..... ..+.--+ +.+ ..++| T Consensus 474 dpyvGky~s~~yi~k~ILr~tDeei~~~~k~I~~E-------~k~~~~~--~~~------~~~~~ 523 (524) T protein:vir:10 474 EPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEE-------SKEARFQ--DPD------QEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHHHHHHHHHHHHHH-------hhcCCCC--CCc------hhhhc Confidence 11 22445655654 35554321 111110000 0000000 000 00011 No 244 >protein:vir:95014 Length: 491 # NCBI annotation: structural protein # Family: family:all:584 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224035;genbank:gi:62327322;genbank:GeneID:5176842 Probab=82.12 E-value=0.08 Score=26.61 Aligned_cols=392 Identities=12% Similarity=0.032 Sum_probs=164.6 Q ss_pred CchHHHHHHhccccc----cccccccccCCc-hHHHHHhhcCCcCcccccHHHHhccHHHHHHHHHHHHhhccCceEEEe Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEK----RQTSQVIELNKD-DEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQ 75 (432) Q Consensus 1 Mg~~~~l~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~g~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 75 (432) +.-|..++....... +....+...... ....... ...+.-.+++...++.++..+.+-|..+. T Consensus 22 ~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~r-----------l~rA~~~n~~~~tl~~l~G~vfrk~p~~~- 89 (491) T protein:vir:95 22 APKWQKVRHALAGDLVGYLRNVGLNEPDKAYGEARQAEY-----------EAGGIVYNFTRRTLSGMVGSVMRKEPEIN- 89 (491) T ss_pred HHHHHHHHHHhcCcchhhcccCCCcCCCCCCCHHHHHHH-----------HhcccCCChHHHHHHHHhchhhcCCceee- Confidence 333333333322210 000000000000 0000000 01112245667777777777776666651 Q ss_pred ecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc-----------eEEEEEEcCcceE Q lcl|Aclame:pro 76 EDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK-----------VQALWPIDASKVT 144 (432) Q Consensus 76 ~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~-----------~~~l~~~~~~~v~ 144 (432) ....+..++...--...+-.+|.+.++...+.+|-+++.+.....+- ..-+..+.|..|- T Consensus 90 ---------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~Ade~~~~~rPy~~~~~~~~Ii 160 (491) T protein:vir:95 90 ---------IPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETAAATAAEQNAGLLNPTIAFYTTENIV 160 (491) T ss_pred ---------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCeEEEEEecCCCcccCHHHHHHhcCCcEEEEechhhhc Confidence 11235566666666778999999999999999999999988754431 1112333333220 Q ss_pred E----------------------EEcC-ccceeccceeEEEe---------------cccCceEE-----Ec-----cce Q lcl|Aclame:pro 145 V----------------------YIDD-VGLLNSKTKMWYVV---------------NTGGQQRV-----LK-----PEE 176 (432) Q Consensus 145 ~----------------------~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~-----~~-----~~~ 176 (432) - +.+. +.........|+.. ..+|.... ++ .-. T Consensus 161 nW~~~~v~g~~~L~~v~l~E~~~~~d~~~~f~~~~~~qyRvL~l~~~g~~~~~v~r~~~~g~~~~~~~~~~~~~g~~~l~ 240 (491) T protein:vir:95 161 NWRLTRVGSVNRVTMVVLRETWEYHEPGNEFETKYGEQYRVLDIDTDGNYRQRLFRFDAEGGAQEEVVEIYPDLGESLRG 240 (491) T ss_pred CceeeeeCCceeeeEEEEEEeEEeecCCCCcccceEEEEEEEeecCCCceEEEEEEEcCCCcceeeeeeeeecCCCcccC Confidence 0 0010 00000000000000 01111100 00 001 Q ss_pred EEEEe--cCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcccccc Q lcl|Aclame:pro 177 ILHFK--NGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENFESMSSGLQNS 254 (432) Q Consensus 177 vih~~--~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~ 254 (432) +|=|. +....+...|.+|+..++..-..+....--....+...+.|..++.--...+++..+.... ....-|+ T Consensus 241 ~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~~l~~~~~P~l~~~G~d~~~~~~~~~~~~--~~i~~g~--- 315 (491) T protein:vir:95 241 VIPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSADNEESSFVVGQPTLFIYPGDNLTPQSFKEANP--NGIKFGS--- 315 (491) T ss_pred eeEEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhHHHHHHHHcccceeeeecCcccCcchhhccCc--ceeEecC--- Confidence 11111 1122344567888877766654444444445556667788888887655555544432211 1112232 Q ss_pred cceeecCCCceeeecCCChhHH--HHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 255 HRIALMPVGYQFQPISLNMSDA--QFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQ 332 (432) Q Consensus 255 g~~~vl~~g~~~~~~~~~~~d~--~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~ 332 (432) +..+.++.|.++.-+...+..+ ..++.++.....+-. .++.-.. .-.+........--.+.|.-++..+++ T Consensus 316 ~~~~~lP~~~~~~~ie~~~~~~~~~~l~~~e~qm~~~Ga------~l~~~~~-~~Ta~~~~~~~~~~~S~L~~~a~~~e~ 388 (491) T protein:vir:95 316 RCGHNLGYGGSAQLIQAGENNLARQNMLDKEQQAIQIGA------QLITPSQ-QITAESARIQRGADTSVMATIARNVSQ 388 (491) T ss_pred cCCcCCCCCCccceeecCcchHHHHHHHHHHHHHHHHHH------HhccCCc-chhHHHHHHHHHHhhHHHHHHHHHHHH Confidence 2235555555554444433322 122222233233311 1221111 111222233344446677778888888 Q ss_pred HHHHhh------ccchhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCccee-eecc Q lcl|Aclame:pro 333 EMTYKL------FLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDRL-LVNG 402 (432) Q Consensus 333 ~l~~~l------l~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~~gd~~-~~~~ 402 (432) .++..+ +.... .....|....+-....-.......+-+++.+|.++....++.+ |+.+.++-++. .+.. T Consensus 389 al~~~l~~~a~w~G~~~-~~~v~i~~n~dF~~~~~~~~~~~all~~~~~G~is~~t~~~~L~~~~vl~~~~e~~~~~ie~ 467 (491) T protein:vir:95 389 AYTDALRWVAMMLGKPE-DSEVEFQLNMDFFLQPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDEDILNAIED 467 (491) T ss_pred HHHHHHHHHHHHcCCCC-CCceEEEeecccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHHHHHHHh Confidence 887653 22110 1111222222222222223356777888889999988888765 44432221111 0001 Q ss_pred ccccccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 403 NMLPIDMAGQAYLKGGDTNGEVSKE 427 (432) Q Consensus 403 n~~~~~~~~~~~~~gg~~~~~~~~~ 427 (432) ...+........-..++ +.+...+ T Consensus 468 ~~~~~~~~~~~~~~~~~-~~~~~~~ 491 (491) T protein:vir:95 468 APLPSGAVTQVAGEIPQ-AAQQQQE 491 (491) T ss_pred cCCCCCccccccccchh-hhhhccC Confidence 11111111000000011 1111111 No 245 >protein:vir:6896 Length: 523 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861872;genbank:gi:32453663;genbank:GeneID:1494298 Probab=79.59 E-value=0.1 Score=26.00 Aligned_cols=410 Identities=10% Similarity=0.088 Sum_probs=169.3 Q ss_pred Cch--HHHHHHhcccc----------ccccccccccCCchH----------------HHHHhhcCCcCcc------cccH Q lcl|Aclame:pro 1 MKI--VDSVKKFFNFE----------KRQTSQVIELNKDDE----------------KLLEWLGISPSTI------SVKG 46 (432) Q Consensus 1 Mg~--~~~l~~~~~~~----------~~~~~~~~~~~~~~~----------------~~~~~~g~~~~~~------~v~~ 46 (432) |+| ++.| ++|... ....+.+.+....+. ....+++...... --++ T Consensus 1 m~f~~~~lf-~f~~~~de~~~~~~~~~~~~S~~~p~~dDGa~~i~~~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~Y 79 (523) T protein:vir:68 1 MKFNILSLF-APWAKMDERDYKDQEKENLESITSPKLDDGAKEYEVSENEAQQTYNAMFQRMFGSQEPGLKSTRELIDTY 79 (523) T ss_pred CCCchhhhh-hhhhhhhhhhhhhhhhccCCCccccCCCCcceeeeccccccccccchhhhhhhhccccccchHHHHHHHH Confidence 776 2222 222110 001111111111110 0011111111100 0124 Q ss_pred HHHhccHHHHHHHHHHHHhhcc-----CceEEEeecCC---cceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcC Q lcl|Aclame:pro 47 KNALKVATVFACIKILSESVSK-----LPLKIYQEDEY---GIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYG 118 (432) Q Consensus 47 ~~a~~~~~v~~~i~~ia~~ia~-----~~~~~~~~~~~---~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G 118 (432) +..+.+|.|..||+.|.+.+.- -|+.+.-.+-+ ............+|+ --+....+++ +++.|.+.| T Consensus 80 R~ma~~pEvd~Av~eIVneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~-ll~F~~~~~~----~fR~WYVDg 154 (523) T protein:vir:68 80 RNLMTNYEVDNAVSEIVSDAIVYEDDTEVVSINLDNTKFSPNIKSMMLDEFNEVLN-HLSFQRKGSD----HFRRWYVDS 154 (523) T ss_pred HHHhhccchhhHHHHhhcceeeecCCCceEEEEecccccchHHHHHHHHHHHHHHH-HhccchhhhH----HHHhheeee Confidence 6667899999999999987632 22333221111 000001111122222 2334444455 566677789 Q ss_pred CeEEEEeeCCC---CceEEEEEEcCcceEEEEcC-----ccc-eeccceeEEEec-------------ccCceEEEccce Q lcl|Aclame:pro 119 NSYANIEFDRK---GKVQALWPIDASKVTVYIDD-----VGL-LNSKTKMWYVVN-------------TGGQQRVLKPEE 176 (432) Q Consensus 119 ~~~~~~~~~~~---g~~~~l~~~~~~~v~~~~~~-----~~~-~~~~~~~~~~~~-------------~~~~~~~~~~~~ 176 (432) ..|..++.+.. .-+.+|..++|..|+.++.- .+. .......+|.|. ..+....++.+- T Consensus 155 Ri~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~g~~vi~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dA 234 (523) T protein:vir:68 155 RIFFHKIIDPKRPKEGIKELRRLDPRQVQYVREVITTTEAGVKIVKGYKEYFIYDTSHESYACDGRIYEAGTKIKIPKAA 234 (523) T ss_pred EEEEEEEeeCCCccccceeeeeeCCcceeEEEeecCCCCcchhhhhhhhhheeeccccccccccccccCCCcceecchhh Confidence 99998876532 24889999999999775421 110 011111122222 112345566776 Q ss_pred EEEEecCCC-CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCC-CCHHHHHHHHHHHHHHhcc---- Q lcl|Aclame:pro 177 ILHFKNGIT-LDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGD-LNEDAKKVFRENFESMSSG---- 250 (432) Q Consensus 177 vih~~~~~~-~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g---- 250 (432) |.|...+.. .++..-+|-+..+.+.+.....++...--+--..+.-+-+.-++-+ +.+..+++..+.+...+.- T Consensus 235 I~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNKlvY 314 (523) T protein:vir:68 235 IVYAHSGLVDCCGKNIIGYLHRAIKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPSRKAAEHMQHVMNTMKNRIAY 314 (523) T ss_pred eeeeeccceeCCCCceeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhhcceeEE Confidence 666653322 2223345667777666666655555544433333444555555543 3333344444433333210 Q ss_pred cccccce------ee------c-----CCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcc-ccccccHH Q lcl|Aclame:pro 251 LQNSHRI------AL------M-----PVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLS-KATLNNIE 312 (432) Q Consensus 251 ~~n~g~~------~v------l-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~-~~~~~~~~ 312 (432) ...+|.+ +. | ..|+++++|.-. ..+.-++-.++..+.+..+++||.+-|.... ..+..... T Consensus 315 Da~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~ 393 (523) T protein:vir:68 315 DATTGKIKNQQHIMSMTEDYWLQRRDGKAVTEVDTLPGA-DNTGNMEDVRWFRNALYMALRIPITRIPSDQGGIQFDAGT 393 (523) T ss_pred eccCCeeccchhhhhhHhhhcccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCcceeecCCCcceeccccc Confidence 0112221 11 1 246777777532 2222345567888999999999999995432 22321222 Q ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHhhccc-----hhhc---chhhhhhhhhhh----hhhh-HHHHHHHHHHHH Q lcl|Aclame:pro 313 QQ------QQQFYTDTLQATLTMYEQEMTYKLFLD-----SELD---KGFYSKFNVDAI----LRAD-IKTRYEAYRTGI 373 (432) Q Consensus 313 ~~------~~~~~~~~l~P~~~~i~~~l~~~ll~~-----~~~~---~~~~~~fd~~~l----~~~d-~~~~~~~~~~~~ 373 (432) +- +..|+...=.-+...+.+.|.+.|+.+ .++. ..+++.|..+.. .... +..|+..+..+- T Consensus 394 EItRDEikF~KFI~rLR~rFs~lf~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~d 473 (523) T protein:vir:68 394 SITRDELSFGKFIRELQHKFEEIFLDPLKTNLILKGIITEDEWNDEINNIKIKFHRDSYFSELKDAEILERRINMLQMAE 473 (523) T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhh Confidence 21 122222222223334444444443222 2221 112222222221 1111 123333333331 Q ss_pred h--CCCcCHHHHHH-HhCCCCCC--CcceeeeccccccccccccccCCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 Q--GGFLKPNEARS-KEDLPPEA--GGDRLLVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEGN 432 (432) Q Consensus 374 ~--~g~~t~nE~R~-~~gl~p~~--~gd~~~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~~ 432 (432) . .-+++.+=||+ .|.+...+ ..++..... ..+.--+ +.+ ..++| T Consensus 474 pyvGky~s~~yi~k~ILr~tDeei~~~~kqI~~E-------~k~~~~~--~p~------~e~~~ 522 (523) T protein:vir:68 474 PFIGKYISHRTAMKDILQMSDEEIEQEAKQIEEE-------SKEARFQ--DPD------QEQED 522 (523) T ss_pred hhhcccchhHHHHHHHhccCHHHHHHHHHHHHHH-------hhcCCCC--CCc------hhhhc Confidence 1 22446665654 35554321 111110000 0000000 000 00011 No 246 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=67.52 E-value=0.25 Score=23.88 Aligned_cols=405 Identities=13% Similarity=0.046 Sum_probs=152.0 Q ss_pred CchHHHH-----HHhccccccccccccccCCchHHHHHhhcCC----cCcc-cccHHHHhccHHHHHHHHHHHHhhc-cC Q lcl|Aclame:pro 1 MKIVDSV-----KKFFNFEKRQTSQVIELNKDDEKLLEWLGIS----PSTI-SVKGKNALKVATVFACIKILSESVS-KL 69 (432) Q Consensus 1 Mg~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~-~v~~~~a~~~~~v~~~i~~ia~~ia-~~ 69 (432) |....-+ ++.|...+... ......| ..+..+.-++ .+.. .-.....+ .+..-.|++.+|+.+- .+ T Consensus 1 ~~~~~~~~~~~~~~r~~~l~~~R--~~~e~~w-~e~~~y~lP~~~~~~~~~~~~~~~~~~-dst~~~a~~~Las~l~~~l 76 (522) T protein:vir:94 1 MAEREGFAAEGAKAVYDRLKNGR--QPYETRA-QNCAAVTIPSLFPKESDNSSTEYTTPW-QAVGARCLNNLAAKLMLAL 76 (522) T ss_pred CcccchhhHHHHHHHHHHHHHHh--hHHHHHH-HHHHHHhcccccCCCCCcccccccccc-cccHHHHHHHHHHHHHhhc Confidence 6543322 11111000000 0001111 1222222111 1100 00011223 3444455666666552 22 Q ss_pred ----ceEEEeecCCcc-----eee----cc-------chhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCC Q lcl|Aclame:pro 70 ----PLKIYQEDEYGI-----QRG----TK-------HYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRK 129 (432) Q Consensus 70 ----~~~~~~~~~~~~-----~~~----~~-------~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~ 129 (432) ||.-....+... ... .. ..+...| .+-| .+.-+.....+++.+|++++++..+.. T Consensus 77 tP~~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~~-~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~ 151 (522) T protein:vir:94 77 FPQSPWMRLTVSEYEAKTLSQDSEAAARVDEGLAMVERVLMAYM-ETNS----FRVPLFEALKQLIVSGNCLLYIPEPEQ 151 (522) T ss_pred CCCCcccccccchhhhhccCcccchhHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhhCcEeEeeeccCC Confidence 333222211100 000 11 1111112 1233 334455678888899999999887766 Q ss_pred CceEEEEEEcCcceEEEEcCccceecccee----------------------------------------EEEecccCce Q lcl|Aclame:pro 130 GKVQALWPIDASKVTVYIDDVGLLNSKTKM----------------------------------------WYVVNTGGQQ 169 (432) Q Consensus 130 g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~ 169 (432) |.+..+..++-..+-+..|..+........ .+.....|.. T Consensus 152 ~~~~~~~~~pl~~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~ 231 (522) T protein:vir:94 152 GTYSPMRMYRLVSYVVQRDAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIE 231 (522) T ss_pred CceeeEEEEEcceEEEeeCCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCce Confidence 655444333334444444433221100000 0000011111 Q ss_pred EE-------EccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHH Q lcl|Aclame:pro 170 RV-------LKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 242 (432) Q Consensus 170 ~~-------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 242 (432) .. |...-.+..|.....+..||.||...+...+.....+.+...........|...+.-+....+.... T Consensus 232 ~~~~~~~~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~~~---- 307 (522) T protein:vir:94 232 VTGTDGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVNPNGITQPRRLN---- 307 (522) T ss_pred ecccCCCCccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeecccccccchhee---- Confidence 10 1111244444444456689999999999999999999999999998888888766644444443321 Q ss_pred HHHHHhcccccccceeec--CCCceeeecCCChhHHH-HHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHH Q lcl|Aclame:pro 243 NFESMSSGLQNSHRIALM--PVGYQFQPISLNMSDAQ-FLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) Q Consensus 243 ~~~~~~~g~~n~g~~~vl--~~g~~~~~~~~~~~d~~-~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~ 319 (432) .+.. | .++- .+++...++... .+.+ ..+..+.....|-.+|-+.....-..+..|..-+ ..+..-. T Consensus 308 ------~~~~--g-~~v~g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~~~~~~~~r~TAtEV-~~r~~E~ 376 (522) T protein:vir:94 308 ------KAAT--G-EFVAGRVEDINFLQLTKG-QDFTIAKSVADAIEQRLGWAFLLNSAVQRNAERVTAEEI-RYVAGEL 376 (522) T ss_pred ------ccCC--c-eeecCCcccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhhhccCCCccccHHHH-HHHHHHH Confidence 1111 1 2222 223344444332 2332 3566777888888888664322222222222111 1222333 Q ss_pred HHHHHHHHHHHHHHHHHhh-------------ccchhhcchhhhhhhhhhhhhhh----HHHHHHHHHHHHhCC------ Q lcl|Aclame:pro 320 TDTLQATLTMYEQEMTYKL-------------FLDSELDKGFYSKFNVDAILRAD----IKTRYEAYRTGIQGG------ 376 (432) Q Consensus 320 ~~~l~P~~~~i~~~l~~~l-------------l~~~~~~~~~~~~fd~~~l~~~d----~~~~~~~~~~~~~~g------ 376 (432) ...|.|+...+.++|-.-+ |++.. ...+.+++ .+.|-... .......+...-+.+ T Consensus 377 ~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~p-~~~v~v~~-~s~La~~qr~~~~~~l~~~~~~ia~l~P~~~~~ 454 (522) T protein:vir:94 377 EATLGGVYSVQSQELQLPIVRVLMNQLQSAGMIPDLP-KEAVEPTV-STGLEALGRGQDLEKLTQAVNMMTGLQPLSQDP 454 (522) T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-cccEEeeE-ecHHHHHHHHHHHHHHHHHHHHHHhccchhhhh Confidence 3445555555555443222 21111 11122332 12222111 111111111111111 Q ss_pred CcCHHH----HHHHhCCCCC---CCccee---eeccccccccccccccCCCCCCCCCCCCCCCCC--C Q lcl|Aclame:pro 377 FLKPNE----ARSKEDLPPE---AGGDRL---LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG--N 432 (432) Q Consensus 377 ~~t~nE----~R~~~gl~p~---~~gd~~---~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~--~ 432 (432) .+..++ +...+|.||. -.-++. .........-... ...+++...........++ + T Consensus 455 ~id~d~~~~~~a~~~Gv~~~~ivr~~ee~~~~~~q~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~ 521 (522) T protein:vir:94 455 DINLPTLKLRLLNALGIDTAGLLLTQDEKIQRMAEQSSQQAVVQG-ASAAGANMGAAVGQGAGEDMAQ 521 (522) T ss_pred cCCHHHHHHHHHHHcCCChhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhcccchhhhc Confidence 122223 3344566441 001110 0000000000000 0000000000000011111 0 No 247 >protein:vir:1538 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052106;swissprot:trembl:q9t110;genbank:gi:9634032;uniprot:Q9T110;genbank:GeneID:1262384 Probab=59.77 E-value=0.39 Score=22.85 Aligned_cols=394 Identities=9% Similarity=-0.013 Sum_probs=147.1 Q ss_pred Cc--------------hHHHHHHhccccccccccccccCCchHHHHHhhcCC----cCcc-cccHHHHhccHHHHHHHHH Q lcl|Aclame:pro 1 MK--------------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS----PSTI-SVKGKNALKVATVFACIKI 61 (432) Q Consensus 1 Mg--------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~-~v~~~~a~~~~~v~~~i~~ 61 (432) |. .|+.|++.- ......| ..+..+.-++ .... .-.....+ ++..-.|++. T Consensus 1 m~~~~~~~~~~~~~k~r~~~l~~~R---------~~~e~~w-~e~~~~~lP~~~~~~~~~~~~~~~~~~-dst~~~a~~~ 69 (535) T protein:vir:15 1 MADSKRTGLGEDGAKATYDRLTNDR---------RAYETRA-ENCAQYTIPSLFPKESDNESTDYTTPW-QAVGARGLNN 69 (535) T ss_pred CCccchhccchHHHHHHHHHHHHHh---------hHHHHHH-HHHHHHhcccccCCCCCcccccccccc-cccHHHHHHH Confidence 22 222222110 0001111 1122221111 0000 00011222 3444456666 Q ss_pred HHHhhcc-----CceEEEeecCCcc--------e-e-------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe Q lcl|Aclame:pro 62 LSESVSK-----LPLKIYQEDEYGI--------Q-R-------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 120 (432) Q Consensus 62 ia~~ia~-----~~~~~~~~~~~~~--------~-~-------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~ 120 (432) +|+.+-+ -||.-....+... + . ..+..+...| .+-| .+.-+..+..+++.+|++ T Consensus 70 Laa~l~~~ltP~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~l-~~sn----f~~~~~~~~~~L~~~G~a 144 (535) T protein:vir:15 70 LASKLMLALFPMQSWMKLTISEYEAKQLVGDPDGLAKVDEGLSMVERIIMNYI-ESNS----YRVTLFECLKQLIVAGNA 144 (535) T ss_pred HHHHHHHhhcCCCcccccccChHHHhccCCCcchHHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhhCce Confidence 6665522 1333222211100 0 0 0011122223 2333 344455678888899999 Q ss_pred EEEEeeCCCC-ceEEEEEEcCcceEEEEcCccceec-------------------------------------------c Q lcl|Aclame:pro 121 YANIEFDRKG-KVQALWPIDASKVTVYIDDVGLLNS-------------------------------------------K 156 (432) Q Consensus 121 ~~~~~~~~~g-~~~~l~~~~~~~v~~~~~~~~~~~~-------------------------------------------~ 156 (432) ++++..+..+ ..-..+|+. ++-+..|..+.... . T Consensus 145 ~l~~~~~~~~~~~f~~~pl~--~~~v~~d~~G~vd~i~r~~~~t~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~ 222 (535) T protein:vir:15 145 LLYLPEPEGSYNPMKLYRLS--SYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEE 222 (535) T ss_pred eEEeecCCCCceeeEEEEcC--eeEEeeCCCCCeeEEEEeEeecHHHHHHHHhHhhhccccccCCCCceeEEEEEEEecC Confidence 9987655332 223344443 33333332221100 0 Q ss_pred -ceeEEEecccCceEE-------EccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEe Q lcl|Aclame:pro 157 -TKMWYVVNTGGQQRV-------LKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) Q Consensus 157 -~~~~~~~~~~~~~~~-------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 228 (432) ....+.+...|.... |...-.+..|.....+..||.||...+...+.....+.+...........|...+.- T Consensus 223 ~~~~~~~~e~~g~~~~~~~~~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~ 302 (535) T protein:vir:15 223 SGDYLKYEEVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNP 302 (535) T ss_pred CCcEEEEEEeeCccccccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecc Confidence 000000001111110 111123444444455668999999999999999999999999988888888777654 Q ss_pred CCCCCHHHHHHHHHHHHHHhcccccccceee--cCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc Q lcl|Aclame:pro 229 VGDLNEDAKKVFRENFESMSSGLQNSHRIAL--MPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA 306 (432) Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~ 306 (432) +......... .+.. +.++ -.+++...++...+.=.-..+..+.....|-.+|=+.....-..+.. T Consensus 303 ~g~~~~~~l~----------~~~~---g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~~~~~~~~r~ 369 (535) T protein:vir:15 303 AGITQPRRLT----------KAQT---GDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNSAVQRTGERV 369 (535) T ss_pred cccccchhcc----------cCCc---eeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhhcccCCCccc Confidence 4443333221 1111 1122 23444555544433333345667778888888885432111122222 Q ss_pred ccccHHH--HHHH------------HHHHHHHHHHHHHHHHHHHh-hccchhhcchhhhhhhhhhhhhh----hHHHHHH Q lcl|Aclame:pro 307 TLNNIEQ--QQQQ------------FYTDTLQATLTMYEQEMTYK-LFLDSELDKGFYSKFNVDAILRA----DIKTRYE 367 (432) Q Consensus 307 ~~~~~~~--~~~~------------~~~~~l~P~~~~i~~~l~~~-ll~~~~~~~~~~~~fd~~~l~~~----d~~~~~~ 367 (432) | .++ .+.. +...-+.|++...-..+.+. .|++. -...+.++|. +.|-.. +.....+ T Consensus 370 T---AtEV~~r~~E~~~~LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~-p~~~v~~~yi-s~La~aqr~~~~~~l~~ 444 (535) T protein:vir:15 370 T---AEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATSQIPEL-PKEAVEPTIS-TGLEAIGRGQDLDKLER 444 (535) T ss_pred c---HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CccceeEEEe-cHHHHHHHHHHHHHHHH Confidence 2 222 2222 33334445444444433332 22211 1122333331 222111 1111111 Q ss_pred HHHHHHhCC------CcCHHH----HHHHhCCCCCC---Cccee---eeccccccccccccccCCCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 AYRTGIQGG------FLKPNE----ARSKEDLPPEA---GGDRL---LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) Q Consensus 368 ~~~~~~~~g------~~t~nE----~R~~~gl~p~~---~gd~~---~~~~n~~~~~~~~~~~~~gg~~~~~~~~~~~e~ 431 (432) .+..+...+ .+..++ +...+|.|+.. .-++. ........ .........|+... ....+..|+ T Consensus 445 ~~~~la~~~P~~ld~~id~d~~~~~~a~~~Gvp~~~i~~~~eev~~~~~q~~~~~-~~~~~a~~~g~~~~-~~~~~~p~~ 522 (535) T protein:vir:15 445 CISAWAALAPMQGDPDINLAVIKLRIANAIGIDTSGILLTDEQKQALMMQDAAQT-GIENAAATGGAGVG-ALATSSPEA 522 (535) T ss_pred HHHHHHhcChhhhhccCCHHHHHHHHHHHcCCChhhhcCCHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc-chhccChHH Confidence 221111110 123333 23345665420 00110 00000000 00000000011111 111111111 Q ss_pred C Q lcl|Aclame:pro 432 N 432 (432) Q Consensus 432 ~ 432 (432) = T Consensus 523 ~ 523 (535) T protein:vir:15 523 M 523 (535) T ss_pred H Confidence 1 No 248 >protein:vir:3361 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523332;genbank:gi:17570823;genbank:GeneID:927409 Probab=41.02 E-value=0.95 Score=20.72 Aligned_cols=392 Identities=10% Similarity=-0.007 Sum_probs=147.1 Q ss_pred Cc--------------hHHHHHHhccccccccccccccCCchHHHHHhhcCC----cCc-ccccHHHHhccHHHHHHHHH Q lcl|Aclame:pro 1 MK--------------IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGIS----PST-ISVKGKNALKVATVFACIKI 61 (432) Q Consensus 1 Mg--------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~-~~v~~~~a~~~~~v~~~i~~ 61 (432) |. .|+.|++.- ......| ..+..+.-++ ... ..-.....+ ++..-.|++. T Consensus 1 m~~~~~~~~~~~~~~~r~~~l~~~R---------~~~e~~w-~e~~~~~lP~~~~~~~~~~~~~~~~~~-dst~~~a~~~ 69 (535) T protein:vir:33 1 MADSKRTGLGEDGAKATYDRLTNDR---------RAYETRA-ENCAQYTIPSLFPKESDNESTDYTTPW-QAVGARGLNN 69 (535) T ss_pred CChhhhhccChhHHHHHHHHHHHHh---------hHHHHHH-HHHHHHhcccccCCCCCcccccccccc-cccHHHHHHH Confidence 32 112221100 0001111 1222221111 000 000011122 3444556666 Q ss_pred HHHhhcc-----CceEEEeecCCcc--------ee--------eccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCe Q lcl|Aclame:pro 62 LSESVSK-----LPLKIYQEDEYGI--------QR--------GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNS 120 (432) Q Consensus 62 ia~~ia~-----~~~~~~~~~~~~~--------~~--------~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~ 120 (432) +|+.+-+ -||.-....+... +. ..+..+...| .+-| .+.-+..+..+++.+|++ T Consensus 70 Laa~l~~~ltP~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~l~~ve~~~~~~~-~~sn----f~~~~~~~~~~L~~~G~a 144 (535) T protein:vir:33 70 LASKLMLALFPMQSWMKLTISEYEAKQLVGDPDGLAKVDEGLSMVERIIMNYI-ESNS----YRVTLFECLKQLIVAGNA 144 (535) T ss_pred HHHHHHHhhcCCCcccccccChHHHhccccCcchHHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhhCce Confidence 6665522 1332222111000 00 0011112222 2333 334455678888899999 Q ss_pred EEEEeeCCCC-ceEEEEEEcCcceEEEEcCccceeccc--------------------------------ee--EEEecc Q lcl|Aclame:pro 121 YANIEFDRKG-KVQALWPIDASKVTVYIDDVGLLNSKT--------------------------------KM--WYVVNT 165 (432) Q Consensus 121 ~~~~~~~~~g-~~~~l~~~~~~~v~~~~~~~~~~~~~~--------------------------------~~--~~~~~~ 165 (432) ++++..+..+ ..-..+|+ ..+-+..|..+...... .+ .+.... T Consensus 145 ~l~~~~~~~~~~~f~~~pl--~~~~v~~d~~G~vd~i~r~~~~t~~ql~~~~~~~~~~~~~~k~~~~~~~v~~~v~~~~~ 222 (535) T protein:vir:33 145 LLYLPEPEGSYNPMKLYRL--SSYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEE 222 (535) T ss_pred eEEeecCCCCceeeEEEEc--CeeEEeeCCCCCeeEEEeeEeecHHHHHHHhhhhhcccccccccccCCeEEEEEEeeCC Confidence 9998765322 22334444 33333333322111000 00 000001 Q ss_pred c----------CceEE-------EccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEe Q lcl|Aclame:pro 166 G----------GQQRV-------LKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQY 228 (432) Q Consensus 166 ~----------~~~~~-------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 228 (432) + |.... |...-.+..|.....+..||.||...+...+.....+.+...........|...+.- T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~ 302 (535) T protein:vir:33 223 SGDYLKYEEVEDVEIDGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNP 302 (535) T ss_pred CCcEEEEEEEeCccccccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecc Confidence 1 11100 111124444544455668999999999999999999999999988888888777654 Q ss_pred CCCCCHHHHHHHHHHHHHHhcccccccceee--cCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCcccc Q lcl|Aclame:pro 229 VGDLNEDAKKVFRENFESMSSGLQNSHRIAL--MPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKA 306 (432) Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~ 306 (432) +......... .+.. +.++ -.+++...++...+.=.-..+..+.....|-.+|-+.....-..+.. T Consensus 303 ~g~~~~~~~~----------~~~~---g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~~~~~~~~r~ 369 (535) T protein:vir:33 303 AGITQPRRLT----------KAQT---GDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNSAVQRTGERV 369 (535) T ss_pred ccccchhhcc----------cCCc---eeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhhcccCCCccc Confidence 4443333221 1111 1122 23444555544433333345667788888888885432111122222 Q ss_pred ccccHHH--HHHH------------HHHHHHHHHHHHHHHHHHHh-hccchhhcchhhhhhhhhhhhhh----hHHHHHH Q lcl|Aclame:pro 307 TLNNIEQ--QQQQ------------FYTDTLQATLTMYEQEMTYK-LFLDSELDKGFYSKFNVDAILRA----DIKTRYE 367 (432) Q Consensus 307 ~~~~~~~--~~~~------------~~~~~l~P~~~~i~~~l~~~-ll~~~~~~~~~~~~fd~~~l~~~----d~~~~~~ 367 (432) | .++ .+.. +...-+.|++...-..+.+. .|++. -...+.++|. +.|-.. +.....+ T Consensus 370 T---AtEV~~r~~E~~~~LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~-p~~~v~~~yi-s~La~aqr~~~~~~l~~ 444 (535) T protein:vir:33 370 T---AEEIRYVASELEDTLGGVYSILSQELQLPLVRVLLKQLQATSQIPEL-PKEAVEPTIS-TGLEAIGRGQDLDKLER 444 (535) T ss_pred c---HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CccceeEEEe-cHHHHHHHHHHHHHHHH Confidence 2 222 2222 33334445444444433332 22211 1122333331 222111 1111111 Q ss_pred HHHHHHhCC------CcCHHH----HHHHhCCCCCCCcceeeecccccccc--------ccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 AYRTGIQGG------FLKPNE----ARSKEDLPPEAGGDRLLVNGNMLPID--------MAGQAYLKGGDTNGEVSKEGN 429 (432) Q Consensus 368 ~~~~~~~~g------~~t~nE----~R~~~gl~p~~~gd~~~~~~n~~~~~--------~~~~~~~~gg~~~~~~~~~~~ 429 (432) .+..+...+ .+..++ +...+|.|+.. .+..+....... ........|+.... ...++. T Consensus 445 ~~~~la~~~P~~~d~~id~d~~~~~~a~~~Gvp~~~---i~~~~ee~~~~~~q~~~~~~~~~~~~~~g~~~~~-~~~~~~ 520 (535) T protein:vir:33 445 CISAWAALAPMQGDPDINLAVIKLRIANAIGIDTSG---ILLTDEQKQALMMQDAAQTGVENAAAAGGAGVGA-LATSSP 520 (535) T ss_pred HHHHHHhhChhhhhccCCHHHHHHHHHHHcCCCHhH---hcCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-hhhcCC Confidence 221111110 123333 23345665410 000000000000 00000001111111 111111 Q ss_pred CCC Q lcl|Aclame:pro 430 EGN 432 (432) Q Consensus 430 e~~ 432 (432) ++= T Consensus 521 ~~~ 523 (535) T protein:vir:33 521 EAM 523 (535) T ss_pred hhH Confidence 111 No 249 >protein:vir:7430 Length: 563 # NCBI annotation: gp7 # Family: family:all:6920 # MgeID: mge:147 # MgeName: Barnyard # Cross-refs: genbank:acc:NP_818545;genbank:gi:29566982;genbank:GeneID:1260216 Probab=38.79 E-value=1 Score=20.47 Aligned_cols=410 Identities=11% Similarity=0.044 Sum_probs=184.7 Q ss_pred CchHHHH----HHhccccccccccccccCCch-HH------HHHh-hcCCcCccccc---HHHHhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MKIVDSV----KKFFNFEKRQTSQVIELNKDD-EK------LLEW-LGISPSTISVK---GKNALKVATVFACIKILSES 65 (432) Q Consensus 1 Mg~~~~l----~~~~~~~~~~~~~~~~~~~~~-~~------~~~~-~g~~~~~~~v~---~~~a~~~~~v~~~i~~ia~~ 65 (432) |+-=.+= +++|.. ... .. ....+ .. +.++ .|.......+- .+.-+.+|.....|+..++- T Consensus 1 m~~~~~q~~p~~~~fp~---~~a-~w-V~~~D~~RlaaY~ly~d~y~n~~~el~~il~G~dr~~~~~ps~r~~V~~~~~~ 75 (563) T protein:vir:74 1 MPYNHKQYDPAKPFLRG---GDD-NI-VDENDKNRVRAYDLYENIYLNSAETLKLVLRGDDSVPILMPSGRKIVEAVHRF 75 (563) T ss_pred CCccccccCCCcccccc---ccc-cc-CCHHHHHHHHHHHHHHHhhcCchhhhhhhcCCCceeeeccchHHHHHHHHHHh Confidence 5532110 011110 000 00 11111 00 1111 12211111110 01112244445566666644 Q ss_pred hccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC---CCceEEEEEEcCcc Q lcl|Aclame:pro 66 VSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR---KGKVQALWPIDASK 142 (432) Q Consensus 66 ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~---~g~~~~l~~~~~~~ 142 (432) + .-+++......++.+ .....+..+|+ .--....+...+.....+.++.|.++..+..+. .|....+..++|.. T Consensus 76 L-g~~~~~~Ve~~~~de-~~~~avq~~Lr-~~~~~e~l~~~~~~~~r~a~vlGDgvf~l~wDp~K~~g~R~rv~~vDP~~ 152 (563) T protein:vir:74 76 L-GVGFDYLVEPDMGDE-GIRQSLNAYFR-TTFKREAIKAKFTSNKRWGLIRGDAHFYIHADPNKKAGERISVDEVDPRQ 152 (563) T ss_pred c-CCCcEEecCccccCc-chHHHHHHHHH-HHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccccccCCCceEeecCCce Confidence 4 444444222221111 11122334443 444456677778888999999999999999873 46677888888876 Q ss_pred eEEEEcCccceec---------------------cceeEEEecccCc---------e-EE-------------------- Q lcl|Aclame:pro 143 VTVYIDDVGLLNS---------------------KTKMWYVVNTGGQ---------Q-RV-------------------- 171 (432) Q Consensus 143 v~~~~~~~~~~~~---------------------~~~~~~~~~~~~~---------~-~~-------------------- 171 (432) +....+.+..... .....|.....|. . .. T Consensus 153 ~fp~~dpd~v~g~~~v~v~~~~~~pdd~~~~~~r~~~~~~~lndeg~~~~~~~~dae~w~lg~wd~r~~~~~~~~~~~~~ 232 (563) T protein:vir:74 153 IFLIEDGSTVVGFHMVDIVQDFRSPDDPSKKLARRRTFRRVRNDEGMFTGRISSELTHWTLGNWDDRGAISDEQARRKEQ 232 (563) T ss_pred eeeccCCCCcccceeeecccCCCCCcchhccceeeeeeeeeeCCCCCccceeeeccchhccccccccCccchhhhcccch Confidence 5543332211000 0000011000110 0 00 Q ss_pred ----------------EccceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHH Q lcl|Aclame:pro 172 ----------------LKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNED 235 (432) Q Consensus 172 ----------------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 235 (432) +..--|.|+++-++.+...|.|-+.-+...+........-......-+|.|-.++....+.+. T Consensus 233 ~~~~~~d~e~~~LP~pi~~iPiv~~~tip~~~s~WG~S~La~ll~~~~eLn~~~Td~s~i~~~tG~pi~vl~~~~p~d~- 311 (563) T protein:vir:74 233 VRSAQHDEEEEELPEPISQLPLYRWRNKPPQNSSWGTSQLEGMETLAYALNQSLTDEDATIVFQGLGMYVTNASAPVDP- 311 (563) T ss_pred hhhhhhhchhhhccccccCccEEEcCCCCCcccccchhhHHHHHHHHHHHhhhhhHHHHHHHhcCCCeEEecccccccc- Confidence 000016677777777889999999988888777766665555566666655444443222111 Q ss_pred HHHHHHHHHHHHhcccccccceeecCC---CceeeecCCChhHHHHHHHHHHHHH-HHHHHhcCChhhccCccccccccH Q lcl|Aclame:pro 236 AKKVFRENFESMSSGLQNSHRIALMPV---GYQFQPISLNMSDAQFLENTELTIR-QIATAFGIKMHQLNDLSKATLNNI 311 (432) Q Consensus 236 ~~~~~~~~~~~~~~g~~n~g~~~vl~~---g~~~~~~~~~~~d~~~~e~~~~~~~-~I~~~~gvp~~~l~~~~~~~~~~~ 311 (432) ...+ ...|. - ..|.++-+.+ +-.+..++-.++-.-+-.-+++..+ -++..-++|..-+|..+.++--+. T Consensus 312 ~~g~-~~~w~---v---gpG~i~El~~~~~~g~l~~v~g~~~l~~~q~Hm~~l~eral~~~s~tPavA~G~vD~~~~~SG 384 (563) T protein:vir:74 312 NTGE-LTDWN---I---GPMQIVEIAGNRNDNYFERVSGVQDVSPFQDHMKWIDEKGIAEGSGTPEVAIGRVDVTSAESG 384 (563) T ss_pred cccc-ccccc---c---CCceeEeccCCccccceeeecchhhhHHHHHHHHHHHHHHHHhhccCcceeecccccccccch Confidence 1000 00011 0 1244555552 2456666665544433344445444 567888999999984443321110 Q ss_pred HHHHHHHHHHHHHHHHH--------------HHHHHHHHhhccchhh----------------cchhhhhhhhhhhhhhh Q lcl|Aclame:pro 312 EQQQQQFYTDTLQATLT--------------MYEQEMTYKLFLDSEL----------------DKGFYSKFNVDAILRAD 361 (432) Q Consensus 312 ~~~~~~~~~~~l~P~~~--------------~i~~~l~~~ll~~~~~----------------~~~~~~~fd~~~l~~~d 361 (432) .-+.-.|.|+.. ++...+.+-||..-+. .....+..-+.+.+..| T Consensus 385 -----iALeL~L~PL~a~~~ek~l~l~~~mr~~r~~~~~~lL~~~erl~~~g~~~~~~g~~~~~~~~~v~ivf~p~~P~d 459 (563) T protein:vir:74 385 -----ISLELQLKPLLAANEEKELEMIVVMDQFLHDWMTMWLPAYESDFQEQDGSRPFASADLLNECSVVCIFADPMPVN 459 (563) T ss_pred -----hhhhhhhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcccccccccccCCceEEEEEeCCCCCcc Confidence 111223334333 1111111111111000 00011233357778889 Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCccee--eecccc-------ccccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 362 IKTRYEAYRTGIQGGFLKPNEARSKE---DLPPEAGGDRL--LVNGNM-------LPIDMAGQAYLKGGDTNGEVSKEGN 429 (432) Q Consensus 362 ~~~~~~~~~~~~~~g~~t~nE~R~~~---gl~p~~~gd~~--~~~~n~-------~~~~~~~~~~~~gg~~~~~~~~~~~ 429 (432) .....+....++.+|+++..-+-++| |++--+-.++. ...... +..+.+. ....+|+......+-.+ T Consensus 460 ~~~vv~~~~tl~~aGiiSretAv~~L~~~g~~~pdae~e~~~ie~~~i~~~~~a~a~ad~~~-~~~a~~~~g~~~~~~dd 538 (563) T protein:vir:74 460 KTQVTQDTLLLQQAHLILRKMAVAKLRSIGWEYPEVDDQGNALTDDDIADMLLAEAEADASL-GLSAMDNGGAGEQQFDD 538 (563) T ss_pred HHHHHHHHHHHHHcCchhHHHHHHHHHhCCCCCCcHHHHHhhcCHHHHHHHHHHHhhccCcc-cceecccCCCCcccccc Confidence 99999999999999999999887777 76542211111 011111 1111111 11112233223333334 Q ss_pred CCC Q lcl|Aclame:pro 430 EGN 432 (432) Q Consensus 430 e~~ 432 (432) .|| T Consensus 539 ~g~ 541 (563) T protein:vir:74 539 QGN 541 (563) T ss_pred cCC Confidence 455 No 250 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=27.89 E-value=1.8 Score=19.18 Aligned_cols=383 Identities=10% Similarity=-0.091 Sum_probs=152.9 Q ss_pred Cc-------------hHHHHHHhcc-ccccccccccccCC-------chHHHHHhhcCCc-CcccccHHHHhccHHHHHH Q lcl|Aclame:pro 1 MK-------------IVDSVKKFFN-FEKRQTSQVIELNK-------DDEKLLEWLGISP-STISVKGKNALKVATVFAC 58 (432) Q Consensus 1 Mg-------------~~~~l~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~g~~~-~~~~v~~~~a~~~~~v~~~ 58 (432) |. -|..++-... ..+.+.....+... .++.......... .......+.|.-.+++..+ T Consensus 14 m~V~~~hp~y~a~~~~W~~~~d~g~~~~k~~g~~YLPk~~~~~~~~~~d~~y~~~~~~~~~~y~~~~~~rA~~~n~~~~t 93 (488) T protein:vir:96 14 MLTPIYHPDYLVNAPQWLRNLDCVMDNIKRKKQTYLPNLGAIPPEAKTDPKVTALAAKIEKDWEDLTWRLANYVNIVNPT 93 (488) T ss_pred ecccccCHHHHHHhhhhhHhhhhhhHHHHHhhhhcCCCCCCccccccCcchhhhhhccchhhhHhhhhhccccCchhHHH Confidence 22 1111111000 00000000000000 0000000000000 0000000122234667777 Q ss_pred HHHHHHhhccCceEEEeecCCcceeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCCCCc------- Q lcl|Aclame:pro 59 IKILSESVSKLPLKIYQEDEYGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGK------- 131 (432) Q Consensus 59 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~~g~------- 131 (432) ++.++..+.+-+..+.... ...+..++...--...+-.+|.+.++...+.+|-+++.+.....+. T Consensus 94 l~~l~G~vfrk~p~~~~~~--------~~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~ade~~ 165 (488) T protein:vir:96 94 MNAITGAVMRREPEFDTMD--------NPVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMADWNK 165 (488) T ss_pred HHHhcchhhccCceeccCC--------cHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHHHHHH Confidence 7777777777766653211 1125566666666778999999999999999999999987654321 Q ss_pred ---eEEEEEEcCcce----------------------EEEEcCccceeccceeEEEecccCc-----------eEE-Ecc Q lcl|Aclame:pro 132 ---VQALWPIDASKV----------------------TVYIDDVGLLNSKTKMWYVVNTGGQ-----------QRV-LKP 174 (432) Q Consensus 132 ---~~~l~~~~~~~v----------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~ 174 (432) ..-+..+.|..| ....|+... .......+....+|. ... ++. T Consensus 166 ~~~rPy~~~~~a~~IinW~~~~v~G~~~L~~v~lrE~~~~~D~~~~-~~~~~~~~~~l~~g~~~v~~~~~~~~~~e~~~~ 244 (488) T protein:vir:96 166 GKKLPTAAFYDALHIIDWEVEYIDGEEKLTYLSLLEDYQERDGGTY-VSKQRLINHRLVDGLCEFQEVTDDEYSDEWTPV 244 (488) T ss_pred hcCCcEEEEechhhhcCcceeccCCceeeEEEEEEEEEEeccCCCc-ccceEEEEEEEECcEEEEEEEecCCcccceEee Confidence 011111111111 001121110 000000000011111 100 110 Q ss_pred c---------eEEEEecCCCCCcccccCHHHHHHHH-HHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHH Q lcl|Aclame:pro 175 E---------EILHFKNGITLDGLVGVPTMEYLKST-LENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRENF 244 (432) Q Consensus 175 ~---------~vih~~~~~~~~~~~G~s~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (432) + -++++- ....+...|.+|+..++.. +........+. ..+...+.|..++...+ .+++..+.... T Consensus 245 ~~g~~~l~~IP~v~~~-~~~~~~~~~~pPLldLA~lnl~Hy~~ssd~~-~il~~~~~p~lv~~~~~-~~~~~~~~~~~-- 319 (488) T protein:vir:96 245 LINSKQSDTIPFFLAS-SQSNEWCIDSTPLTSLAEISLSIYVMNAYSN-KAMILANEAKWMVDMGD-MNKTMASEMNP-- 319 (488) T ss_pred cCCCcccCeeEEEEEe-cCCCCCCCCCCchHHHHHHHHHHHhhhhHHH-HHHHhcCCceeeeccCC-CCccccccccc-- Confidence 0 122232 2223445678887765555 44444444443 44446667766654333 34333322211 Q ss_pred HHHhccccccc-ceeecCCC-ceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHH Q lcl|Aclame:pro 245 ESMSSGLQNSH-RIALMPVG-YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 322 (432) Q Consensus 245 ~~~~~g~~n~g-~~~vl~~g-~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~ 322 (432) .|..-.+ -+...+.| ++|.+.+. +.+ ..+.++...+++.. .| ..++.- ..+..+........--.+. T Consensus 320 ----~g~~~~~~~~~~~~~g~~~~~e~~~--~~l-~~~~l~~l~~qm~~-~G--a~l~~~-~~~~Ta~~~~~~~~~~~S~ 388 (488) T protein:vir:96 320 ----LGFTLAGRMPYYVKNGDVKVIQAQF--SPE-TENKVEKLFEQAVK-VG--ASLFTQ-QSNETATGAAIRSGSSTAS 388 (488) T ss_pred ----ceeeecccccccccCCceeecCCch--hHH-HHHHHHHHHHHHHH-Hh--HhhccC-CCcchHHHHHHHHHHhhHH Confidence 1211111 12233344 45554443 322 12223333333211 12 112211 1111122333334445677 Q ss_pred HHHHHHHHHHHHHHhhccchhhc---------chhhhhhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC- Q lcl|Aclame:pro 323 LQATLTMYEQEMTYKLFLDSELD---------KGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE- 392 (432) Q Consensus 323 l~P~~~~i~~~l~~~ll~~~~~~---------~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~~~gl~p~- 392 (432) |.-++..+++.+++.+-.-..+. ....+..+.+-....-.....+++.+++.+|.+|....++.+-.--+ T Consensus 389 L~~~a~~le~al~~~l~~~A~w~g~~~~~~~~~~~~~~in~dF~~~~ld~~~~~al~~~~~~G~Is~~t~~~~L~~~gvl 468 (488) T protein:vir:96 389 MATLGNNVEDTVRNMLRFIMRYFEGTNLYVNPDELVFKLNRDYFDVEVNPQMLQVAYAAMMEGNLPQVSWFELLKRARVV 468 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCccceEEEeccCCCCccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCcC Confidence 88888888888876542211110 11233333332322223445677788889999998888776533211 Q ss_pred ----CCcceeeeccccccccccccccCCC Q lcl|Aclame:pro 393 ----AGGDRLLVNGNMLPIDMAGQAYLKG 417 (432) Q Consensus 393 ----~~gd~~~~~~n~~~~~~~~~~~~~g 417 (432) ++-++. ..+.+ ..+.- T Consensus 469 ~~d~~~e~~~------~~ie~---~g~~~ 488 (488) T protein:vir:96 469 RGDMSKEEFD------EHIAE---LGFGM 488 (488) T ss_pred CccCCHHHHH------HHHhh---cCCCC Confidence 111110 00000 00000 No 251 >protein:vir:572 Length: 506 # NCBI annotation: unknown # Family: family:all:6660 # MgeID: mge:13 # MgeName: SPBc2 # Cross-refs: genbank:acc:NP_046607;genbank:gi:9630180;genbank:GeneID:1261432 Probab=26.54 E-value=1.9 Score=19.01 Aligned_cols=403 Identities=13% Similarity=0.136 Sum_probs=130.9 Q ss_pred CchHHHHHHhccccccccccccccCCchHHHHHhhcCCcCccc--ccHHHHhc--cHHHHHHHHHHHHhhccCceEEEee Q lcl|Aclame:pro 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTIS--VKGKNALK--VATVFACIKILSESVSKLPLKIYQE 76 (432) Q Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--v~~~~a~~--~~~v~~~i~~ia~~ia~~~~~~~~~ 76 (432) |.+|+. ..........+..||+....... ++.-+++. ...|+.-.++ |-++|---|.. T Consensus 34 ~~~~~N--------------G~v~~i~~~~L~~~F~NPD~~~~~I~~L~~Y~YI~~~~i~QL~~L----I~aLP~L~Y~I 95 (506) T protein:vir:57 34 SNMFSN--------------GIVTEIEAEQLKNYFSNPDEFQEEIEDLAQYFYISTAEIHQLFEL----IEALPTLNYKI 95 (506) T ss_pred HHhhcC--------------CceeeeeHHHHHhhhcChHHHHHHHHHHHHHhhhhcchHHHHHHH----HHhcCCcceee Confidence 333321 00111111222333332211110 11111111 1223333333 34444333332 Q ss_pred cCCcc-eeeccchhHHhhhccccccCCHHHHHHHHHHHHHhcCCeE--------------------EEEeeCCCCceEEE Q lcl|Aclame:pro 77 DEYGI-QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSY--------------------ANIEFDRKGKVQAL 135 (432) Q Consensus 77 ~~~~~-~~~~~~~~~~lL~~~pn~~~~~~~f~~~~~~~~l~~G~~~--------------------~~~~~~~~g~~~~l 135 (432) +-=.+ .....| .-+||..-.. .--.++-+.++.++...|.-. +.+--...|.. . T Consensus 96 ~~~~k~K~~~~~--iS~lN~~L~K-v~HK~LTRDLL~Q~A~aGTLvG~WLG~~k~PY~~iF~~iKYVFP~~R~~G~~--V 170 (506) T protein:vir:57 96 DSFNKVKSSDKH--ISLLNKSLHK-VKHKRLTRDLLKQVATAGTLVGIWLGDAKSPYPFIFDEIKYVFPSFRRNGDW--V 170 (506) T ss_pred hhhhhccchhhH--HHHHHHHHHH-HHHHHHHHHHHHHhhccCceeEeeecCCCCcchhhhhhhhhhccccccCCce--E Confidence 21000 000011 1112211111 111222233333333333211 11111111111 1 Q ss_pred EEEcCcceEEEEcCccceeccceeEEEecc-------cC---ceEEEccceEEEEec-CCCCCcccccCHHHHHHHHHHH Q lcl|Aclame:pro 136 WPIDASKVTVYIDDVGLLNSKTKMWYVVNT-------GG---QQRVLKPEEILHFKN-GITLDGLVGVPTMEYLKSTLEN 204 (432) Q Consensus 136 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~~~~ 204 (432) .+++...++...+...-........+-.+. +. +...+|.+.-+..|. ....+...|.|.....+-.+.- T Consensus 171 ~VvD~~~F~~~~~~~R~~~~~~LSP~I~~~~Y~~~~~~~~~~R~~~LP~~rT~~~R~~TL~RNQ~LG~~~~T~~L~Dv~H 250 (506) T protein:vir:57 171 CVVDMELFTKYKDDQRNELLKSLSPYIKQSDYENFMKDREKYRFKELPQERTFPLRTGTLKRNQGLGTSWVTPGLYDVLH 250 (506) T ss_pred EEEehHHhhhhhHHHHHHHHHhhhhhhhhhhhhhHhhhHHhhhhhhcccccchhheeeeecccccccccccchhHHHHHH Confidence 122222221111100000000000000000 00 011223333222221 1222333455544444333333 Q ss_pred HHHHHHHHHHHHhccCCcceEEEeCC--CC----C---HHHHHH-HHHHHHHHhcccccccc-eeecCCCceeeecCCCh Q lcl|Aclame:pro 205 SASADKFINNFYKQGLQVKGLVQYVG--DL----N---EDAKKV-FRENFESMSSGLQNSHR-IALMPVGYQFQPISLNM 273 (432) Q Consensus 205 ~~~~~~~~~~~~~n~~~~~~~~~~~~--~~----~---~~~~~~-~~~~~~~~~~g~~n~g~-~~vl~~g~~~~~~~~~~ 273 (432) ...+.....+....--..-.|++... +. + ++..++ +..-.+.+.......|- ++.++.=.++.--.... T Consensus 251 K~KLkD~E~SIA~KII~A~AVL~~~~~~~Ngeyt~~K~~~a~K~Ki~~GVK~ALEK~~KDGv~~vs~PDFA~~~FP~vK~ 330 (506) T protein:vir:57 251 KKKLKDVERSIANKIINAVAVLTIGTDKGNGEYTNMKLPKAVKQKIHGGVKTALEKNQKDGVTVVSIPDFADINFPDVKA 330 (506) T ss_pred HHHHHHHHHHHHHHHhhhheeeeeecccCCcccccccchHHHHHHHHHHHHHHHhcccccCeEEEecccccccccccccc Confidence 33333333332222222233444432 22 1 233222 22222333322111121 22233322222211111 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCChhhccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhcchhhh Q lcl|Aclame:pro 274 SDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKLF---LDSELDKGFYS 350 (432) Q Consensus 274 ~d~~~~e~~~~~~~~I~~~~gvp~~~l~~~~~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~ll---~~~~~~~~~~~ 350 (432) .-++- .--+....+|-+++|++..++.+ +.+||+++.-...-||.. |.-+++.||+++-.+++ .+.+..-.+++ T Consensus 331 ~~LD~-~K~D~I~~DI~~A~GlS~~L~NG-~~GNYAts~LNLD~FYKr-IGV~~E~IEqEvY~~L~~lvL~~~~~~NY~~ 407 (506) T protein:vir:57 331 DGLDG-AKFDHINSDIQSAYGLSGSLLNG-DGGNYATSSLNLDTFYKR-IGVLMEDIEQEVYQKLFNLVLPAAQKDNYYM 407 (506) T ss_pred cCCCc-hhhcccchhhhhhhccchheecC-CCcceeeeechHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccccCCceeE Confidence 11111 12235567899999999888865 456777766656566654 77889999988777753 33333444566 Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHhCCCcCHHHHHH-HhCCCCCC-------------Ccceeeeccc--ccccccccccc Q lcl|Aclame:pro 351 KFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARS-KEDLPPEA-------------GGDRLLVNGN--MLPIDMAGQAY 414 (432) Q Consensus 351 ~fd~~~l~~~d~~~~~~~~~~~~~~g~~t~nE~R~-~~gl~p~~-------------~gd~~~~~~n--~~~~~~~~~~~ 414 (432) .+|-+. ....+++++..-++-.-|| ++--+.. .+|..-.+ =-++.+.+.+ ...-++.+.+. T Consensus 408 ~Y~KD~--Pl~~~~K~D~LIKL~~~G~-S~K~V~Dnl~GvS~E~Y~E~tlYE~E~LKL~EKI~P~~~s~~~tGN~vG~P~ 484 (506) T protein:vir:57 408 NYDKDK--PLTLKEKMDILIKLNDKGW-SIKHVVDNLAGVSWESYLEQTLYETEELKLQEKIRPYQTSYTFTGNEVGRPN 484 (506) T ss_pred eeCCCC--ccchhhhhchheeecccCc-cHHHHHHhhhccchHHHHHHHHHHHHHhhHHhhcCcccccceecccccCCCC Confidence 665543 3344555555555544454 3333322 22222100 0111111221 11111111111 Q ss_pred CCCCCCC--CCCCCCCCCCC Q lcl|Aclame:pro 415 LKGGDTN--GEVSKEGNEGN 432 (432) Q Consensus 415 ~~gg~~~--~~~~~~~~e~~ 432 (432) ......+ -++....+.|| T Consensus 485 ~~~~~~D~Tv~Satsngndn 504 (506) T protein:vir:57 485 EGNKNNDNTVKSATSNGNDN 504 (506) T ss_pred CCCCcccchhhhcccCCCCC Confidence 1001111 11222222233 No 252 >protein:vir:103765 Length: 549 # NCBI annotation: hypothetical protein # Family: family:all:481 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024925;genbank:gi:48697195;genbank:GeneID:2846089 Probab=22.57 E-value=2.4 Score=18.47 Aligned_cols=406 Identities=14% Similarity=0.038 Sum_probs=151.7 Q ss_pred Cc-----hHHHHHHhccccccccccccccCCchHHHHHhhcCCc--------CcccccH---HHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MK-----IVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISP--------STISVKG---KNALKVATVFACIKILSE 64 (432) Q Consensus 1 Mg-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~v~~---~~a~~~~~v~~~i~~ia~ 64 (432) |+ +...|++.+..-+.. ....... .....++.-+.. ....-.. ...+ .++.-.|++.+|+ T Consensus 1 m~~d~~~~~~~l~~r~~~l~~~--R~~~e~~-w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~~~~-dstg~~a~~~LAs 76 (549) T protein:vir:10 1 MTNDDAKILQALNADHGRMKEK--RQSYEAV-WNDVIDYLMPRLDKFGQLPRPDSEKGRERSQKMF-DSTAPLALRNFVA 76 (549) T ss_pred CCcchHHHHHHHHHHHHHHHHH--hhhHHHH-HHHHHHHhccccccccccCCCCCCcccccccccc-cchHHHHHHHHHH Confidence 43 222222222111000 0001111 111222211111 0000000 1122 3334455555555 Q ss_pred hhc------cCceEEEeecCCc-cee-eccchh-------HHhhh-ccccccCCHHHHHHHHHHHHHhcCCeEEEEeeCC Q lcl|Aclame:pro 65 SVS------KLPLKIYQEDEYG-IQR-GTKHYL-------NNLLR-LRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDR 128 (432) Q Consensus 65 ~ia------~~~~~~~~~~~~~-~~~-~~~~~~-------~~lL~-~~pn~~~~~~~f~~~~~~~~l~~G~~~~~~~~~~ 128 (432) .+- .-||.-....++. .+. ....++ +..++ .+-|. +.-+-.+..+++++|++++++..+. T Consensus 77 ~l~~~ltpp~~~wF~l~~~~~~~~e~~~v~~~l~~ve~~~~~~~~~~~snf----~~~~~~~~~~L~~~Gta~l~~~~~~ 152 (549) T protein:vir:10 77 AMDSMITPATQLWHRLKTGNDALNEIASVKAYLQGVVRTLFAARYRWQGGF----VTQMGATYQSIGLFGPGALMIEHDV 152 (549) T ss_pred HHHhhccCCCCccccccCCccchhhhhHHHHHHHHHHHHHHHHHhhhhcCh----HHHHHHHHHHHHhhcceeeEEeecC Confidence 542 3344333322211 110 001111 11111 12333 3345557788999999999987654 Q ss_pred CCceEEEEEEcCcceEEEEcCccceecccee------------------------------------------------- Q lcl|Aclame:pro 129 KGKVQALWPIDASKVTVYIDDVGLLNSKTKM------------------------------------------------- 159 (432) Q Consensus 129 ~g~~~~l~~~~~~~v~~~~~~~~~~~~~~~~------------------------------------------------- 159 (432) . ....+..++-..+-+..|..+........ T Consensus 153 ~-~~~~f~~~pl~~~~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~v~~~~~~~~~~~~~v~~~V~pr~~~~~~~ 231 (549) T protein:vir:10 153 G-KGIVYRNVPMQRLWFAENNSGLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADRDPRK 231 (549) T ss_pred C-CeeEEEEEEcCeEEEeeCCCCCeEEEEEEeecCHHHHHHhcCcccCCHHHHHHhhcCCCceEEEEEEeecCCCCCccc Confidence 3 33344444444444444433322111000 Q ss_pred ---------EEEecccCceEEEc-----cceEEEEecCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceE Q lcl|Aclame:pro 160 ---------WYVVNTGGQQRVLK-----PEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGL 225 (432) Q Consensus 160 ---------~~~~~~~~~~~~~~-----~~~vih~~~~~~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 225 (432) .+....++ ...+. ..-.+..|.....+..||.||...+...+.....+.+...........|... T Consensus 232 ~~~~~~pf~sv~~e~~~-~~il~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~ 310 (549) T protein:vir:10 232 LDGRNMQFASYWLDEGR-DRIVQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDVRMANDMAKTNIRGAQKLVDPPLL 310 (549) T ss_pred cccccCceEEEEEEecC-CEeeccCCcccCCcceeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcee Confidence 00011111 01111 1112223323334567999999999999999999999999988888888777 Q ss_pred EEeCCCCCHHHHHHHHHHHHHHhcccccccceeecCCCceeeecCCChhHHHHHHHHHHHHHHHHHHhcCChh-hccCcc Q lcl|Aclame:pro 226 VQYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMH-QLNDLS 304 (432) Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I~~~~gvp~~-~l~~~~ 304 (432) +..+...++... ..|..+.+ ...-.+...++|+.....-.-..+..+.....|-.+|-+... ++-..+ T Consensus 311 v~~~g~~~~~~l----------~pgg~~~~-~~~~~~~~~~~pl~~~~~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~~ 379 (549) T protein:vir:10 311 ANEDGVLDGFDL----------RSGALNWG-GLNDKGEEMVKPLLTGKQAQIGIEFAQDTRQTINQWFYVTLFQILVDSG 379 (549) T ss_pred ecccccccccee----------ccCCcccc-ccCCCCccceeeeccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcCCC Confidence 654444333221 12221111 111123345677654322222345577888889999977653 232223 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------ccch--hhc-chhhhhhh-hhhhhhhhHHHHHH Q lcl|Aclame:pro 305 KATLNNIEQQQQQFYTDTLQATLTMYEQEMTYKL-------------FLDS--ELD-KGFYSKFN-VDAILRADIKTRYE 367 (432) Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~P~~~~i~~~l~~~l-------------l~~~--~~~-~~~~~~fd-~~~l~~~d~~~~~~ 367 (432) ..|-.-+. .+..-....|.|....+.++|-.-+ |++. +.. .+..+.+. .+.|-+.-.....+ T Consensus 380 ~~TAtEV~-~r~~E~~~~LGpv~~rl~~E~l~Pli~R~~~il~r~g~lP~~p~~l~~~~~~~~i~yis~La~aq~~~~~~ 458 (549) T protein:vir:10 380 DMTATEVL-QRAQEKGVLLAPTLGRTQSELLGPMIAREVDILAEAGQLPDMPQELIDAGADVDVEYDSPLNKAMRAGEGA 458 (549) T ss_pred CccHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhcCCceeEEEeecHHHHHHHHHHHH Confidence 22211111 2222233444555555544432222 2211 111 12122222 12332221112221 Q ss_pred HHHHHHh-------CC-----CcCHHH----HHHHhCCCCCCCcceeeecccccccc-----------ccccccCCCCCC Q lcl|Aclame:pro 368 AYRTGIQ-------GG-----FLKPNE----ARSKEDLPPEAGGDRLLVNGNMLPID-----------MAGQAYLKGGDT 420 (432) Q Consensus 368 ~~~~~~~-------~g-----~~t~nE----~R~~~gl~p~~~gd~~~~~~n~~~~~-----------~~~~~~~~gg~~ 420 (432) .+...++ .+ .+..++ +-..+|.|+- .+..+.....+- ........++.. T Consensus 459 ~i~~~~~~~~~laq~~Pe~ld~id~d~~~~~~a~~~Gvp~~----~irs~eev~~~r~~~~~qqq~~~~~~~a~~a~~~a 534 (549) T protein:vir:10 459 AILQWLQQLGIVSQFDPAAAKVPNGARIARLLADYGGVPVE----AMSTDEELQAQQAAEAQAAQMQQMLAAAPVAAGAI 534 (549) T ss_pred HHHHHHHHHHHHhccChhHHhcCCHHHHHHHHHHhcCCCcc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1111111 11 123333 2334566641 111110000000 000000000000 Q ss_pred CCCCCCCCCCCC Q lcl|Aclame:pro 421 NGEVSKEGNEGN 432 (432) Q Consensus 421 ~~~~~~~~~e~~ 432 (432) +.-.+..+...+ T Consensus 535 ~~~~~~~ta~~~ 546 (549) T protein:vir:10 535 KDLSDAQTAAQT 546 (549) T ss_pred HhhhhhcCCCcc Confidence 011111111111 Done!