Virfam_CNT_anal:NC_015721

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : phi1402 | Genbank acc : NC_015721

Category to which the Query Phage was assigned :

The phage most likely belong to the Siphoviridae class
However, some subunits are missing to confidently assign it to one of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 42

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	NOT FOUND
Portal	12	lcl\|NC_015721.1_cdsid_YP_004678839.1	HHsearch (proba=98.10%)
TermL	NOT FOUND
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	19	lcl\|NC_015721.1_cdsid_YP_004678846.1	HHsearch (proba=98.13%)
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
Portal	protein:vir:103219 protein:vir:107662 protein:vir:94049	JK06 T1 OP2	15 % 12 % 15 %
Ne1	protein:vir:96105 protein:vir:77650 protein:vir:99546	F8 Bcep781 BcepF1	20 % 21 % 19 %