Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


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Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 40 lcl|Aclame:protein:vir:9509|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Portal 38 lcl|Aclame:protein:vir:9507|NCBI_annot:hypothetical HHsearch (proba=100.00%)
TermL 37 lcl|Aclame:protein:vir:9506|NCBI_annot:hypothetical Blast (e-value=0)
MTP 46 lcl|Aclame:protein:vir:9515|NCBI_annot:hypothetical Blast (e-value=1e-124)
Sheath NOT FOUND
Ad1 42 lcl|Aclame:protein:vir:9511|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Hc1 43 lcl|Aclame:protein:vir:9512|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ne1 44 lcl|Aclame:protein:vir:9513|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Tc1 45 lcl|Aclame:protein:vir:9514|NCBI_annot:hypothetical HHsearch (proba=100.00%)
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 NOT FOUND

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:101291
protein:vir:9509
protein:vir:100632
phiNM3
phiN315
77
100 %
100 %
98 %
Portal protein:vir:101289
protein:vir:100650
protein:vir:9507
phiNM3
77
phiN315
100 %
100 %
100 %
TermL protein:vir:101288
protein:vir:100634
protein:vir:9506
phiNM3
77
phiN315
100 %
100 %
100 %
MTP protein:vir:100637
protein:vir:9515
protein:vir:101304
77
phiN315
phiNM3
100 %
100 %
98 %
Ad1 protein:vir:101300
protein:vir:100669
protein:vir:9511
phiNM3
77
phiN315
100 %
100 %
100 %
Hc1 protein:vir:101301
protein:vir:100673
protein:vir:9512
phiNM3
77
phiN315
100 %
100 %
100 %
Ne1 protein:vir:101302
protein:vir:9513
protein:vir:100652
phiNM3
phiN315
77
100 %
100 %
81 %
Tc1 protein:vir:101303
protein:vir:100675
protein:vir:9514
phiNM3
77
phiN315
100 %
100 %
100 %