Virfam_CNT_anal:NC_020867

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : S-RIP1 | Genbank acc : NC_020867

Category to which the Query Phage was assigned :

The queried phage was recognized as a Podoviridae of Type3 (Read more about that Type)
Note that only the Adaptor was detected unambiguously

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

Click on the image to download it as png (download in pdf or svg format)

ERROR_IN_GENERATING_GENECONTEXT_FIGURE. Contact Webmaster.

Number of sequences analyzed : 55

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	1	lcl\|NC_020867.1_cdsid_YP_007676436.1	HHsearch (proba=100.00%)
Portal	NOT FOUND
TermL	22	lcl\|NC_020867.1_cdsid_YP_007676457.1	Blast (e-value=0)
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	NOT FOUND
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	2	lcl\|NC_020867.1_cdsid_YP_007676437.1	HHsearch (proba=100.00%)
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
MCP	protein:vir:100057 protein:vir:78739 protein:vir:1781	P-SSP7 Syn5 P60	75 % 43 % 36 %
TermL	protein:vir:100065 protein:vir:78718 protein:vir:3376	P-SSP7 Syn5 T3	80 % 62 % 45 %
Ad3	protein:vir:100027 protein:vir:78741 protein:vir:1780	P-SSP7 Syn5 P60	38 % 38 % 33 %