Results of the Virfam Analysis 

on the Neck Module and part of the Head and Tail Proteins


ERROR_IN_GENERATING_GENECONTEXT_FIGURE. Contact Webmaster. ERROR_IN_GENERATING_TREE_FIGURE. Contact Webmaster.

Protein Superfamily Index in Query Genome Sequence Header Detection Method
MCP 13 lcl|NC_018270.1_cdsid_YP_006560305.1 HHsearch (proba=100.00%)
Portal 23 lcl|NC_018270.1_cdsid_YP_006560315.1 HHsearch (proba=100.00%)
TermL NOT FOUND
MTP NOT FOUND
Sheath NOT FOUND
Ad1 NOT FOUND
Hc1 NOT FOUND
Ne1 NOT FOUND
Tc1 NOT FOUND
Ad2 NOT FOUND
Hc2 NOT FOUND
Tc2 NOT FOUND
Ad3 NOT FOUND
Hc3 NOT FOUND
Ad4 24 lcl|NC_018270.1_cdsid_YP_006560316.1 HHsearch (proba=100.00%)

NB : Matches obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.
Check that the canonical intergene below is not violated in that case.




No unsual intergene distance were detected.

Protein Superfamily Corresponding Protein in Aclame Aclame Phage Seq. Identity (%)
MCP protein:vir:15
protein:vir:118
protein:vir:5202
GA-1
B103
PZA
27 %
27 %
25 %
Portal protein:vir:4732
protein:vir:5205
protein:vir:9605
Cp-1
PZA
C1
25 %
25 %
25 %
Ad4 protein:vir:4733
protein:vir:97357
protein:vir:9465
Cp-1
66
44AHJD
26 %
25 %
25 %