Virfam_CNT_analysis

Results of the Virfam Analysis

on the Neck Module and part of the Head and Tail Proteins

Name of the query : Phage Name : MAV1 | Genbank acc : NC_001942 | Aclame index mge :90

Category to which the Query Phage was assigned :

The queried phage could not be assigned to any of the 4 canonical Types characterized in Lopes et al (2014)

Graphical Summary of the Superfamilies Detected (Help on Superfamily names):

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Number of sequences analyzed : 15

Table of the Head-Neck-Tail Proteins Detected :

Protein Superfamily	Index in Query Genome	Sequence Header	Detection Method
MCP	NOT FOUND
Portal	NOT FOUND
TermL	NOT FOUND
MTP	NOT FOUND
Sheath	NOT FOUND
Ad1	11	lcl\|Aclame:protein:vir:4308\|NCBI_annot:HtpB\|genbank:acc:NP_047267;genbank:gi:9630721;genbank:GeneID:	HHsearch (proba=73.78%)
Hc1	NOT FOUND
Ne1	NOT FOUND
Tc1	NOT FOUND
Ad2	NOT FOUND
Hc2	NOT FOUND
Tc2	NOT FOUND
Ad3	NOT FOUND
Hc3	NOT FOUND
Ad4	NOT FOUND

NB : Matched obtained with a HHsearch probability between 70 % and 90 % should be considered with caution.

Highest Identities of Proteins of the Query Phage with at least 3 Proteins in Aclame Phages :

Protein Superfamily	Corresponding Protein in Aclame	Aclame Phage	Seq. Identity (%)
Ad1	protein:vir:79701	LL-H	13 %