Query lcl|NC_021563.1_cdsid_YP_008130351.1 [gene=M697_gp58] [protein=hypothetical protein] [protein_id=YP_008130351.1] [location=31381..31794] Match_columns 137 No_of_seqs 2 out of 4 Neff 1.2 Searched_HMMs 1612 Date Thu Nov 7 18:09:59 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_58 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_58_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:78379 Length: 139 100.0 3.7E-93 2.3E-96 527.3 8.5 137 1-137 2-138 (139) 2 protein:vir:94997 Length: 139 100.0 1.7E-92 1.1E-95 523.7 8.5 137 1-137 2-138 (139) 3 protein:vir:103278 Length: 169 96.9 4.5E-06 2.8E-09 49.9 5.3 127 1-137 38-168 (169) 4 protein:vir:79637 Length: 130 96.1 2.4E-05 1.5E-08 45.9 5.1 126 1-137 1-128 (130) 5 protein:vir:107704 Length: 132 95.7 7.3E-05 4.5E-08 43.3 6.0 130 1-137 1-132 (132) 6 protein:vir:104348 Length: 129 94.6 0.0001 6.2E-08 42.5 3.5 126 1-137 1-128 (129) 7 protein:vir:80429 Length: 150 58.1 0.19 0.00012 24.6 5.0 129 1-136 13-150 (150) 8 protein:vir:97211 Length: 150 47.4 0.22 0.00014 24.2 3.6 120 13-136 1-150 (150) 9 protein:vir:94921 Length: 125 38.1 0.83 0.00052 21.0 5.3 124 1-134 1-125 (125) 10 protein:vir:100242 Length: 114 18.2 1.4 0.00088 19.8 2.7 102 16-130 1-114 (114) No 1 >protein:vir:78379 Length: 139 # NCBI annotation: hypothetical protein # Family: family:all:12033 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110845;genbank:gi:134288606;genbank:GeneID:5179642 Probab=100.00 E-value=3.7e-93 Score=527.33 Aligned_cols=137 Identities=74% Similarity=1.144 Sum_probs=136.3 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCCCcccCcchhhhhhhhccccccceeeeeccCceeEEeecccccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDAPTSVNTPYLASYMLLADTEQADLFFTERRAGIYQIDINVASVKGSAP 80 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenidapts~~tpylasymll~dteqadlf~te~ragiyqidin~~s~~gsap 80 (137) .-||||||||||++|+.||..|.+||||||||||||+|||||||||||+|||||||||||||||+||||||+||++|||| T Consensus 2 atyfedltkafdtalvafgtnngikvalenidaptstdtpylasymllsdteqadlfwteqragvyqvdinvgsalgsap 81 (139) T protein:vir:78 2 ATYFEDLTKAFDTALVAFGTNNGIKVALENIDAPTSTDTPYLASYMLLSDTEQADLFWTEQRAGVYQVDINVGSALGSAP 81 (139) T ss_pred chhHHHHHHhhhheeeeeccCCceeEeeeccCCCccCCcchhhheeeeccCcccceeeecccCceEEEeeecccccccch Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 81 INKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 81 in~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) |||+||||++||++||||+||||||||||||||||||||||+||||||||||||+|| T Consensus 82 inrladklnaafaagncfsrneicaevqsvslgplivengwakrplsinfiaftari 138 (139) T protein:vir:78 82 INRLADKLNAAFAAGNCFSRNEICAEVQSVSLGPLIVENGWAKRPLSINFIAFTARI 138 (139) T ss_pred hHHHHhhhhhhhhccccccchhhhhhhhhccccceeeccCcccCceeeeeeeeeeec Confidence 999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:94997 Length: 139 # NCBI annotation: hypothetical protein # Family: family:all:12033 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224021;genbank:gi:62327308;genbank:GeneID:5176825 Probab=100.00 E-value=1.7e-92 Score=523.66 Aligned_cols=137 Identities=74% Similarity=1.140 Sum_probs=136.3 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCCCcccCcchhhhhhhhccccccceeeeeccCceeEEeecccccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDAPTSVNTPYLASYMLLADTEQADLFFTERRAGIYQIDINVASVKGSAP 80 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenidapts~~tpylasymll~dteqadlf~te~ragiyqidin~~s~~gsap 80 (137) .-||||||||||++|+|||.+||+||||||||||||+|.|||||||||+|||||||||||||||+||||||+||++|||| T Consensus 2 atyfedltkafdtalvtfgtdndikvalenidaptstdapylasymllsdteqadlfwteqragvyqvdinvgsalgsap 81 (139) T protein:vir:94 2 ATYFEDLTKAFDTALVTFGTDNDIKVALENIDAPTSTDAPYLASYMLLSDTEQADLFWTEQRAGVYQVDINVGSALGSAP 81 (139) T ss_pred chhHHHHHHhhhheeeeeccCCCceEEeeccCCCcccCcchhhheeecccCcccceeeecccCceEEEeeecccccccch Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 81 INKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 81 in~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) |||+||||+..|++||||+|||||||||||||||||||||||||||||||||||+|| T Consensus 82 inrladklnttfaagncfsrneicaevqsvslgplivengwakrplsinfiaftari 138 (139) T protein:vir:94 82 INRLADKLNTTFAAGNCFSRNEICAEVQSVSLGPLIVENGWAKRPLSINFIAFTARI 138 (139) T ss_pred hHHHHHhhhhhhhccccccchhhhhhhhhccccceeeccCcccCceeeeeeeeeeec Confidence 999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:103278 Length: 169 # NCBI annotation: phage-related conserved hypothetical protein # Family: family:all:5121 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277458;genbank:gi:71834100;genbank:GeneID:3562389 Probab=96.87 E-value=4.5e-06 Score=49.90 Aligned_cols=127 Identities=26% Similarity=0.321 Sum_probs=93.8 Q ss_pred CchhhhHHhhhhhhhhhcccc--ccceeeeeccCC-CcccCcchhhhhhhhccccccceeeeec-cCceeEEeecccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAA--NSIAVALENIDA-PTSVNTPYLASYMLLADTEQADLFFTER-RAGIYQIDINVASVK 76 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~--n~~~valenida-pts~~tpylasymll~dteqadlf~te~-ragiyqidin~~s~~ 76 (137) |-| .++-++--.|....++ -..+||.||.-- |.-...+||..|++=+||...||==.-| ..|+|||+|....-. T Consensus 38 ~h~--ei~~a~rk~l~~~a~a~~~~LpVA~ENVaFtPp~dG~~YLr~~~lPadT~~~~L~gd~R~y~GVfQIsVV~PaGt 115 (169) T protein:vir:10 38 VHY--EMMVAARKLVSDAAVDIAGSLPVAYENCGFTPPKNGSSWLKFDYTEVDSVTWGLQRTCRYYVGMVQVSIFFSPGE 115 (169) T ss_pred hHH--HHHHHHHHHHHHHHhhcccCCcEeeCCCCcCCCCCCccEEEEEEecCCceeeeccCCCceEEEEEEEEEEecCCC Confidence 332 4556666666666665 367799999865 4455578999999999999999865543 369999999999999 Q ss_pred cccchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 77 GSAPINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 77 gsapin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) |+.....+||.+..+|+.+-.++---|- |.-|| .-|+--|-||-. | |-|+-|. T Consensus 116 G~~ka~qiAdeiadlF~~gt~L~~Gyi~-~~~~~-~p~i~~~s~~~i-P-----vr~~~R~ 168 (169) T protein:vir:10 116 GTDRPRQLAGRLSEAFADGTMLDSGYIY-EGGSV-FPPVKSQSGWFI-P-----VRFYVRM 168 (169) T ss_pred CcchhHHHHHHHHHhhhCCceeeceeec-CCCeE-CCeeecCCceEE-e-----EEEEEEe Confidence 9999999999999999999888876443 33333 234445778843 3 4567777 No 4 >protein:vir:79637 Length: 130 # NCBI annotation: gp41 # Family: family:all:5121 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285530;genbank:gi:148734513;genbank:GeneID:5219995 Probab=96.12 E-value=2.4e-05 Score=45.89 Aligned_cols=126 Identities=25% Similarity=0.267 Sum_probs=90.6 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCC-CcccCcchhhhhhhhccccccceeeee-ccCceeEEeecccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDA-PTSVNTPYLASYMLLADTEQADLFFTE-RRAGIYQIDINVASVKGS 78 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenida-pts~~tpylasymll~dteqadlf~te-~ragiyqidin~~s~~gs 78 (137) |-| .+..+---.+.+-+.++ .+||.||.-- |.-....||..|++=+||...+|==.- +..|+|||+|....-.|+ T Consensus 1 ~~~--e~~~aaR~~~~~~~~~~-lpVA~ENv~FtPp~~G~~YLr~~~lpa~T~~~~L~~d~r~y~Gv~QI~VV~paG~G~ 77 (130) T protein:vir:79 1 MHY--ELSVAARMALAQEYESE-YMIAYENVEFTPPKGGGIWLKYDYKEADTIIHDLKRKCISYIGMVQIGIEFPPGSGI 77 (130) T ss_pred Ccc--hhhHHHHHHHHhhhhhh-CceeecCCCcCCCCCCceEEEEEecCCCceeeeccCCCceEEEEEEEEEEecCCCCc Confidence 555 23333333445555553 7999999865 344556899999999999999885443 346999999999999999 Q ss_pred cchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 79 APINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 79 apin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) .....+||.|-..|+.+-.++---|- |.-|| .-|+--|-||-. | |-|+-|. T Consensus 78 ~~a~~iA~ei~dlF~~g~~L~~Gyi~-~~~~~-~p~i~~~~~~~i-P-----vr~~~R~ 128 (130) T protein:vir:79 78 DKARKLAKNIADFFEDGKMLSNGYIS-EGAKV-HQVQKSESGWFY-P-----VRFYVRY 128 (130) T ss_pred chhhHHHHHHHHhccCCceeeceeec-CCCeE-CCeeecCCceEE-e-----EEEEEEe Confidence 99999999999999999888776333 33333 234445778843 3 4577788 No 5 >protein:vir:107704 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:5121 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003903;genbank:gi:45686319;genbank:GeneID:2773044 Probab=95.71 E-value=7.3e-05 Score=43.26 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=86.3 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCC-CcccCcchhhhhhhhccccccceeeeec-cCceeEEeecccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDA-PTSVNTPYLASYMLLADTEQADLFFTER-RAGIYQIDINVASVKGS 78 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenida-pts~~tpylasymll~dteqadlf~te~-ragiyqidin~~s~~gs 78 (137) |-| .+.-|.-..+.. ...+.+||.||.-- |.-...+||-.|++=+||...+|==.-| ..|+|||+|....-.|+ T Consensus 1 ~hy--E~~~a~r~~la~--~~~~lpVA~eNv~F~Pp~~G~~yLr~~~lpa~T~~~~L~~d~r~y~Gv~QI~Vv~paG~G~ 76 (132) T protein:vir:10 1 MHY--ELSAAARAAFLS--KYRDFPHYMENRNFTPPKDGGMWLRFNYIEGDTLYLSIDRKCKSYIAIVQIGVVFPPGSGV 76 (132) T ss_pred Cch--HHHHHHHHHHHh--hhcCCcEeecCCCcCCCCCCceEEEEEEccCCceeeeccCcCcEEEEEEEEEEEecCCCCc Confidence 555 233344444443 33458999999875 3344568999999999999999843332 35999999999999999 Q ss_pred cchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 79 APINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 79 apin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) .....+||.|-..|+.+-.+..-- .-|.-||- =|+--|-||- -|.|.-.-+=||.- T Consensus 77 ~~a~~iAd~i~~~F~~g~~l~~Gy-i~~~~~~~-p~i~~~s~~~-iPvrf~yR~Dt~~~ 132 (132) T protein:vir:10 77 DEARLKAKEIADFFKDGKMLNVGY-IFEGAIVH-QIVKHESGWM-IPVRFTVRVDTKET 132 (132) T ss_pred chhHHHHHHHHHhccCcceeecce-ecCCCccC-CceeCCcceE-EEEEEEEEecccCC Confidence 999999999999999887775442 22333332 2333466774 35443333333333 No 6 >protein:vir:104348 Length: 129 # NCBI annotation: hypothetical protein # Family: family:all:5121 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398976;genbank:gi:81343960;genbank:GeneID:3778880 Probab=94.62 E-value=0.0001 Score=42.50 Aligned_cols=126 Identities=22% Similarity=0.228 Sum_probs=85.6 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCC-CcccCcchhhhhhhhccccccceeeee-ccCceeEEeecccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDA-PTSVNTPYLASYMLLADTEQADLFFTE-RRAGIYQIDINVASVKGS 78 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenida-pts~~tpylasymll~dteqadlf~te-~ragiyqidin~~s~~gs 78 (137) |.- +--...-|..++.+ ....+||.||.-- |.-....||..|++=+||...+|==.- +..|+|||+|....-.|+ T Consensus 1 ~s~-aar~~v~d~~~~~~--~~~lpVA~eNv~FtPp~~G~~YLr~~~lpa~T~~~~L~~d~r~y~Gv~QI~Vv~p~G~G~ 77 (129) T protein:vir:10 1 MSL-AARKFVNDLLVNEF--PVRYPVAWENAAFTPPADGSIWLKYDYTEVDTVTYGLSRKCKYYVGMVQISVFFSPGTGI 77 (129) T ss_pred Cch-HHHHHHHHHHHHhh--cCCCcEeecCCCcCCCCCCceEEEEEecCCCceeeeccCCCceEEEEEEEEEEecCCCCc Confidence 211 00001122333333 2245799999865 344556899999999999999885443 346999999999999999 Q ss_pred cchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeecC Q lcl|NC_021563. 79 APINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKRL 137 (137) Q Consensus 79 apin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r~ 137 (137) .....+||.|-..|+.+-.++---|- |.-|| .-|+--|-||-. | |-|+-|. T Consensus 78 ~~a~~iA~ei~d~F~~g~~L~~Gyi~-~~~~~-~p~i~~~~~~~i-p-----vr~~~r~ 128 (129) T protein:vir:10 78 DKPRQIANQLAESIVDGTMLDSGTIY-ESGVV-NPVIKSKSGWFI-P-----VRFYVRL 128 (129) T ss_pred chhhHHHHHHHHhccCCceeeceeec-CCCeE-CCeeecCCceEE-e-----EEEEEEe Confidence 99999999999999999888776333 33332 234445778843 3 4577777 No 7 >protein:vir:80429 Length: 150 # NCBI annotation: BcepGomrgp11 # Family: family:all:5248 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210231;genbank:gi:146329923;genbank:GeneID:5123538 Probab=58.06 E-value=0.19 Score=24.58 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=81.3 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCC--CcccCcchhhhhhhhcccccccee-----eeeccCceeEEeeccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDA--PTSVNTPYLASYMLLADTEQADLF-----FTERRAGIYQIDINVA 73 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenida--pts~~tpylasymll~dteqadlf-----~te~ragiyqidin~~ 73 (137) .+.|-+--.+=|++-+.=|.. .++-|+.|. |.+-+-+|..--.--.+.+||-+= =.=+|.|+--|+|=+- T Consensus 13 ~~~f~~~W~~~~~~~~~g~~~---~~~w~~~~~~~pP~g~~~WaRLti~h~~~~qA~~~~~~~gr~~~r~GlI~VQiF~p 89 (150) T protein:vir:80 13 NTMLFDQWSVADWSKVKGGKP---NIAWEGRESARPPDGSAPYVAIFIKHVDGQQASLTDPDMLRRWSRDGLITVQCFGM 89 (150) T ss_pred HHHHhhhhccCcchhhcCCcc---eeeecCcccCCcCCCCCceEEEEEecCCcccccccCCCCcceEeeCcEEEEEEeee Confidence 222222222222222221221 488899998 777777776544444566677652 2235799999999555 Q ss_pred --ccccccchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeec Q lcl|NC_021563. 74 --SVKGSAPINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKR 136 (137) Q Consensus 74 --s~~gsapin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r 136 (137) +-.|+--+.|+||+++.+|....+= -+=-|-.++++-+|+ ++||-.--++|-|--=--| T Consensus 90 ~~~G~G~~la~k~Ad~a~eaFe~~~t~-g~i~f~~as~~eiG~---d~gWYQ~NV~ipF~yde~r 150 (150) T protein:vir:80 90 LSAGQGLEDATYQATIAMRAFEGKQSA-NGIWFRNARIKEIGS---DRGWYQVNMIVEFEYDEVR 150 (150) T ss_pred ccCCchhhHHHHHHHHHHHHHhccCCC-CCcccccccccccCC---CCceEEEEeEeeeeccccC Confidence 4588889999999999999765432 122356778888887 6799888787777543344 No 8 >protein:vir:97211 Length: 150 # NCBI annotation: hypothetical protein ORF026 # Family: family:all:5248 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294534;genbank:gi:149408255;genbank:GeneID:5237076 Probab=47.41 E-value=0.22 Score=24.21 Aligned_cols=120 Identities=22% Similarity=0.285 Sum_probs=69.8 Q ss_pred hhhhhcccccc----------------------ceeeeeccCC--CcccCcchhhhhhhhcccccccee----eeeccCc Q lcl|NC_021563. 13 IPLMTFGAANS----------------------IAVALENIDA--PTSVNTPYLASYMLLADTEQADLF----FTERRAG 64 (137) Q Consensus 13 ~~l~tfg~~n~----------------------~~valenida--pts~~tpylasymll~dteqadlf----~te~rag 64 (137) ..|-||-.+++ +.++-++.|. |.+.+-+|..--.--.+.+||-+= =--+|.| T Consensus 1 ~~~~tF~qaR~ei~t~f~~~W~a~~~a~~g~~p~~~~w~~~~~~~~P~g~~~WaRLti~~~~~~~as~G~~~gr~~~r~G 80 (150) T protein:vir:97 1 MTLPTFDSARDEILGLFNTKWITDTPALNGGAPIRVEWPGVDAGDPPPADKPYARITLRHTTSRQATFGPTGGRRFTRPG 80 (150) T ss_pred CCCCcHHHHHHHHHhhhhhhccccchhhcCCcceeeccCCcccCCCcCCCCceEEEEeeccccccccccCCCCcEEeeCc Confidence 22223332222 1234444441 222222332222222244566431 1126889 Q ss_pred eeEEeeccc--ccccccchHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeeeec Q lcl|NC_021563. 65 IYQIDINVA--SVKGSAPINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFTKR 136 (137) Q Consensus 65 iyqidin~~--s~~gsapin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft~r 136 (137) +--|+|=+- +-.|+--+.|+||+++.||....+=.+ =-|-.++++-+|+ ++||-.--++|-|--=--| T Consensus 81 li~VQiF~p~~~G~G~~la~~~Ad~a~eaFe~~~t~g~-i~f~~a~~~eig~---~~gWyQ~Nv~i~Feyde~r 150 (150) T protein:vir:97 81 LITVQVFTPLSGGQGLSLAEKCAIIARDAFEGRGTASG-IWFRNARIQEIGP---DGAWYQMNVVVEFEYDELR 150 (150) T ss_pred EEEEEEeeeccCCchhhHHHHHHHHHHHHHhccCCcCC-eecccccccccCC---CCceEEEEeEeeeeccccC Confidence 999998874 568889999999999999976654333 3466778888887 6799887777777543344 No 9 >protein:vir:94921 Length: 125 # NCBI annotation: possible peptidoglycan binding protein # Family: family:all:5248 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239283;genbank:gi:66392065;genbank:GeneID:5076566 Probab=38.09 E-value=0.83 Score=21.02 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=74.8 Q ss_pred CchhhhHHhhhhhhhhhccccccceeeeeccCCCcccCcchhhhhhhhcccccccee-eeeccCceeEEeeccccccccc Q lcl|NC_021563. 1 MGYFEDLTKAFDIPLMTFGAANSIAVALENIDAPTSVNTPYLASYMLLADTEQADLF-FTERRAGIYQIDINVASVKGSA 79 (137) Q Consensus 1 mgyfedltkafd~~l~tfg~~n~~~valenidapts~~tpylasymll~dteqadlf-~te~ragiyqidin~~s~~gsa 79 (137) |-|++--...-+. |.=+ -+++.+.-+| +.|.+ +-+|.---..-.+.+||-+= =.-+|-|+--|+|=+-.-.|+. T Consensus 1 Mt~~q~r~~I~~r--~~a~-~~~~~I~~~N-~pp~~-~~~W~Rlti~~g~~~~a~iG~~~~~rtGli~iqiF~p~~~G~~ 75 (125) T protein:vir:94 1 MSYFQEKLDIENY--FKAN-WPDTPIFYEN-RTANS-TGTWVRLTIQNGDAFQASNGEVSYRHPGVVFVQIFTKKEVGSG 75 (125) T ss_pred CCHHHHHHHHHHH--HHhC-CCccceeeCC-CCCCC-CCceEEEEeccCcccccccCCceeeeeeEEEEEeeecCCcChH Confidence 8876532111111 1112 2356688899 44433 33343222222233333210 0125789999999998899999 Q ss_pred chHHHHHHHHhhhcccCccchhhhhhhhhhccccceeeccCccccceeeeeeeee Q lcl|NC_021563. 80 PINKMADLLMLAFKPSNTFQRNEICAEVQSVSLGPLIVQNGWAMRPLSINFVAFT 134 (137) Q Consensus 80 pin~~ad~l~~af~~~n~f~rneicaevqsvslgpliv~ngwa~rplsinfiaft 134 (137) -+.++||++.+.|.-- +.++= .|-+++....|+ .+||-.--++|-|-+=. T Consensus 76 ~~~~~ad~~~~~f~~~-~~g~i-~f~~~~~~~~g~---~~gwyQ~Nv~I~f~~~~ 125 (125) T protein:vir:94 76 EALKLADKVDALFRSK-TLGNI-QFKVPQVQKVPS---TTEWYQVNVSTEFYRGS 125 (125) T ss_pred HHHHHHHHHHHHHccC-CCCce-EEeeceecCCCC---CCCEEEEEEEEeeecCC Confidence 9999999999999533 33332 466677777775 79998877777665544 No 10 >protein:vir:100242 Length: 114 # NCBI annotation: gp71 # Family: family:all:2712 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355407;genbank:gi:77864697;genbank:GeneID:3725964 Probab=18.17 E-value=1.4 Score=19.76 Aligned_cols=102 Identities=21% Similarity=0.344 Sum_probs=53.5 Q ss_pred hhccccccceeeeeccC--------CCcccCcchhhhhhhhcccccccee-eeeccCceeEEeecccccccccchHHHHH Q lcl|NC_021563. 16 MTFGAANSIAVALENID--------APTSVNTPYLASYMLLADTEQADLF-FTERRAGIYQIDINVASVKGSAPINKMAD 86 (137) Q Consensus 16 ~tfg~~n~~~valenid--------apts~~tpylasymll~dteqadlf-~te~ragiyqidin~~s~~gsapin~~ad 86 (137) |+ .-.|.-||.-|+ ||.-..-||+. |-.++.+...-|= -++-+.|.||||+=+.+-.- -.++|| T Consensus 1 ~~---~~~i~~~l~~~~g~~~~~~~aP~~~~~Py~v-y~rvsg~p~~tL~G~~g~~~~r~QiD~yA~T~~e---A~~La~ 73 (114) T protein:vir:10 1 MS---ALTIRDAIGIVGGAKGYVSVASSAAQSPYYV-VSRVSGTRDMALGGATGGKSGMFQIDVYAKTYTE---ADSLAD 73 (114) T ss_pred Cc---eeeeehhhcccccccccCCCCCCCCCCceEE-EEeccCcccccccCCCCcceEEEEEEeeeCCHHH---HHHHHH Confidence 11 234455666665 78888889988 8888877644332 24557889999998776543 245565 Q ss_pred HHHhhhcccCccchhhhhhhhhhcc---ccceeeccCccccceeeee Q lcl|NC_021563. 87 LLMLAFKPSNTFQRNEICAEVQSVS---LGPLIVQNGWAMRPLSINF 130 (137) Q Consensus 87 ~l~~af~~~n~f~rneicaevqsvs---lgpliv~ngwa~rplsinf 130 (137) +...+.-.+.-|+-.++ .|.+.-+ -++--| .--+|||| T Consensus 74 ~~~~~l~~~~~f~~~~l-~~~~d~ye~dT~l~Rv-----sld~si~f 114 (114) T protein:vir:10 74 QIIDRVESTGMFSVGGV-SDLPDDYSSDTGVFRV-----SLEISVQF 114 (114) T ss_pred HHHhhcccccCeeeecc-ccCCCCCCcccCceEE-----EEEEEEeC Confidence 55444333333432221 1111100 011000 11367777 Done!