Query lcl|NC_021560.1_cdsid_YP_008130151.1 [gene=RHXG_00004] [protein=peptidase S14] [protein_id=YP_008130151.1] [location=3283..4332] Match_columns 349 No_of_seqs 194 out of 2570 Neff 8.7 Searched_HMMs 1612 Date Thu Nov 7 18:40:26 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_4 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_4_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:79548 Length: 652 100.0 5.5E-64 3.4E-67 367.4 27.6 313 1-349 1-320 (652) 2 protein:vir:95512 Length: 693 100.0 1.2E-63 7.1E-67 365.6 28.2 330 1-349 31-382 (693) 3 protein:vir:5743 Length: 117 # 1.4 46 0.028 11.5 1.6 39 1-41 79-117 (117) 4 protein:vir:5977 Length: 109 # 1.2 55 0.034 11.0 2.3 36 1-54 72-109 (109) 5 protein:vir:95896 Length: 111 1.1 57 0.035 10.9 2.1 37 1-41 74-111 (111) 6 protein:vir:95069 Length: 111 1.1 57 0.035 10.9 2.1 37 1-41 74-111 (111) 7 protein:vir:94491 Length: 111 1.1 58 0.036 10.9 2.1 37 1-41 74-111 (111) 8 protein:vir:93739 Length: 111 1.1 58 0.036 10.9 2.1 37 1-41 74-111 (111) 9 protein:vir:97429 Length: 111 1.1 58 0.036 10.9 2.1 37 1-41 74-111 (111) 10 protein:vir:97328 Length: 111 1.1 58 0.036 10.9 2.1 37 1-41 74-111 (111) No 1 >protein:vir:79548 Length: 652 # NCBI annotation: putative protease/scaffold protein # Family: family:all:62 # ACLAME annotation(s): go:0008236 - serine-type peptidase activity; phi:0000017 - phage prohead/capsid assembly # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272518;genbank:gi:148609387;genbank:GeneID:5204384 Probab=100.00 E-value=5.5e-64 Score=367.38 Aligned_cols=313 Identities=29% Similarity=0.422 Sum_probs=227.4 Q ss_pred Ce--eeeccEEEEeecccccccccccCHHHHHHHHHhcCCCCcEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEecchh Q lcl|NC_021560. 1 MT--VLVDGELLLYGFVGENYWDMGFTAREVIEALAEVGRDADITVRINSGGGYTDDGVSIFNALKVHKGKVTVIVDAVA 78 (349) Q Consensus 1 ~~--~~~~~~I~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~I~l~InSpGG~v~~~~~i~~~i~~~~~~v~~~v~g~a 78 (349) |. -=.+++|+|||+|+. | ++++++|+.+|...++.+.|.|+||||||+|++|++|||+|++++.+|+++|+|+| T Consensus 1 ~~a~~~~~aei~iy~~Ig~--w--~vta~~~~~~L~~l~~~~~I~i~INSpGG~V~~G~aIyn~lk~~~~~v~~~i~G~A 76 (652) T protein:vir:79 1 MQAGHQSDADIYIYDEIGF--W--GVTAKQFISDLNALGDITHINLHINSPGGDVFEGIAIFNALKTHGASITVYVDGVA 76 (652) T ss_pred CCCCCCCCceEEEEeeccc--c--cCCHHHHHHHHHhcCCCceEEEEEeCCCCChhHHHHHHHHHhhcCCCeEEEEeehh Confidence 33 245668999999973 3 58999999999998877889999999999999999999999999999999999999 Q ss_pred hhHHHHHHhcCCeEEEccCCcccccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHcCCcccCHH Q lcl|NC_021560. 79 FSSASLIAMAGEERIMRKGAMMMIHDPSGGVWGTAQDLESFTKYLQKQADSMAGIYADVTGDDVDDIREEMKTELWLTAD 158 (349) Q Consensus 79 aSaa~~Ia~aad~i~~~~~s~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~t~~ 158 (349) ||+|++|+|+||+++|++++++|||+||++..|++++++...+.+++++..+..+|+.+||++.++|.++|++++|||++ T Consensus 77 AS~ASvIa~ag~~~~m~~~a~lMIH~p~~~~~G~a~dl~~~a~~L~~~~~~i~~~Ya~ktG~~~e~i~~~m~~etwlta~ 156 (652) T protein:vir:79 77 ASMASVIAMVGNPVIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVEAVLLPAYAQKTGKTTDEIAAMLADETWMSGA 156 (652) T ss_pred hhHHHHHHhcCCeEEcCCCceEEEEccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHhhhcCCCHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhccchhhhcchhHHHHHHhhh--hhhHhHHHHHHHhhhhccCchhHHHHHhhhcccchhhhhccccchhhhhhhhhh Q lcl|NC_021560. 159 EAVERGFATSVSDAKSRAVAAHDY--RVYSHAPERLVAMATKKNWSHDEARSKAMASATAPNRQPKKEPPMTEKTKADDS 236 (349) Q Consensus 159 eA~~~G~~D~i~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (349) ||+++||+|+|.+......+..+. ..|+++|+.+.++.......... ....+|.......+ ...+ T Consensus 157 EA~e~Gf~D~i~~~~~~~a~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----------v~d~EPa~~~~pvq---AaAP 223 (652) T protein:vir:79 157 ECLAQGFADQVTPAVKAMACIQSKRTEEFKKMPDSIRNMITPPRNSAPR----------VQDDEPAASRTPVQ---AAAP 223 (652) T ss_pred HHHhcCCcccccchhhhhhhhhhhhhhhhhhhHHHHHHHhccccccccc----------cccccccccccccc---ccCC Confidence 999999999998876665554332 34778888887766432221110 00011111110000 0000 Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhccC---cHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhcchhhhccccc Q lcl|NC_021560. 237 TADIETAKAEAGKSAVAAYQTRRKNVMALEEAKG---REALAETLIDTELSEEAIKGALAAAPKAVADHGKPQASTYQEQ 313 (349) Q Consensus 237 ~~~~~~~~~~~~~~~~~a~~~r~~~I~~~~~~~~---~~~~a~~~~~~~~s~e~a~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (349) .... .......+.++|+|+.+|.+++..-+ .+..++++++.++|+|+++.++++...... .+.... .+. T Consensus 224 ~~De----~airAq~~aeeraRi~~I~~l~a~Fggr~~~l~~~~l~d~~~s~e~ar~~il~~l~~~~---~p~~~~-~~~ 295 (652) T protein:vir:79 224 VVDE----NSIRAQVLAEQKARVNGINDLFAMFGGRYQTLQAQCLADPECSLEQAREKLLNEMGRES---TPSNKN-TPA 295 (652) T ss_pred cCch----hHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHhhccCCCHHHHHHHHHHHHHhhc---CCCCCC-cce Confidence 0011 11122446779999999999886543 457789999999999999999998874321 111100 000 Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhcCCC Q lcl|NC_021560. 314 RLSAAARLAQPVGENNNRTEMRVDIVADMKRRHGVN 349 (349) Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~ 349 (349) .... +. + +. ....+..++.-|.|+. T Consensus 296 ~~~~--~~----g-~~----~~d~~~~aL~~R~g~~ 320 (652) T protein:vir:79 296 HIYA--GN----G-NF----VGDGIRQALMARAGFE 320 (652) T ss_pred eEee--cc----c-hh----hHHHHHHHHHhhcCCc Confidence 0000 00 0 00 0112223334445554 No 2 >protein:vir:95512 Length: 693 # NCBI annotation: Putative Clp protease # Family: family:all:62 # ACLAME annotation(s): go:0008236 - serine-type peptidase activity; phi:0000017 - phage prohead/capsid assembly # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293349;genbank:gi:148912770;genbank:GeneID:5228164 Probab=100.00 E-value=1.2e-63 Score=365.63 Aligned_cols=330 Identities=26% Similarity=0.369 Sum_probs=226.8 Q ss_pred Cee--ee--ccEEEEeecccccccccccCHHHHHHHHHhcCCCCcEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEecc Q lcl|NC_021560. 1 MTV--LV--DGELLLYGFVGENYWDMGFTAREVIEALAEVGRDADITVRINSGGGYTDDGVSIFNALKVHKGKVTVIVDA 76 (349) Q Consensus 1 ~~~--~~--~~~I~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~I~l~InSpGG~v~~~~~i~~~i~~~~~~v~~~v~g 76 (349) +++ -. .++|+|||+|+.| ++++.+|.++|...++.+.|.|+||||||+|++|++|||+||+|+.+|+++|+| T Consensus 31 ~~i~~~~~~~~ei~iy~~Ig~w----gita~~f~~~L~~~~d~~~I~v~INSpGGdV~~G~aIyn~Lk~~~~~Vtv~vdG 106 (693) T protein:vir:95 31 YSIKAAGRGVAEVLLYDEIGVW----GITALQFARDLKAMGDLTKINLHIHSPGGDVFEGTAIYNLLRNHPASVDVYIDG 106 (693) T ss_pred eeeeecCCCeeEEEEeeccccc----ccCHHHHHHHHHhcCCCceeEEEEECCCCchhhHHHHHHHHhhcCCCeEEEEee Confidence 333 22 2489999999843 589999999999998888899999999999999999999999999999999999 Q ss_pred hhhhHHHHHHhcCCeEEEccCCcccccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHcCCcccC Q lcl|NC_021560. 77 VAFSSASLIAMAGEERIMRKGAMMMIHDPSGGVWGTAQDLESFTKYLQKQADSMAGIYADVTGDDVDDIREEMKTELWLT 156 (349) Q Consensus 77 ~aaSaa~~Ia~aad~i~~~~~s~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~t 156 (349) +|||+|++|+|+||+|+|++++++|||+||+..+|+.+++++..+.+++++..+..+|++++|++.++|.++|++++||| T Consensus 107 lAASaASvIamagd~i~m~~~a~~MIH~p~~~~~Gna~dl~~~a~~L~~~~~~i~~~Y~~ktG~~~e~i~~~m~~etwlt 186 (693) T protein:vir:95 107 LAASMASVIAMAGDTIYMPENAMMMVHKPWGIQGGDADDMRRYAELLDKVEDTLVMAYANKTGKSADDIKALLKEETWMN 186 (693) T ss_pred hhhhHHHHHHhcCCeEEecCCCeEEEEccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHhhhcCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhccchhhhcchhHHHHHHh--hhhhhHhHHHHHHHhhhhccCchhHHHHHhhhcccchhhhhccccchhhhhhhh Q lcl|NC_021560. 157 ADEAVERGFATSVSDAKSRAVAAH--DYRVYSHAPERLVAMATKKNWSHDEARSKAMASATAPNRQPKKEPPMTEKTKAD 234 (349) Q Consensus 157 ~~eA~~~G~~D~i~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (349) ++||+++||+|+|.+......... ....|.++|+.+..++.....+.... ...+.+.+......... T Consensus 187 a~EAve~Gf~Dei~e~~~~~a~~~~~~~~~~~~~p~~l~~~~~~~~~~p~~~-----------~~~PaPTPaaaaPaaP~ 255 (693) T protein:vir:95 187 GREAVAAGFADQLTEPLQAAAHLSSKRMQEFAHMPEALKTLLAPRAQTPAAP-----------ANTPAPTPASAAPAAPV 255 (693) T ss_pred HHHHHhccchhhhhhhhHHHHhhHHHHHHHhhchHHHHHHHHhhhccccccc-----------ccCcccCccCCCCCCCc Confidence 999999999999998766555433 34457788888877665432221110 11111111110000000 Q ss_pred hhHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhc---cCcHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhcchhhhcc- Q lcl|NC_021560. 235 DSTADIETAKAEAGKSAVAAYQTRRKNVMALEEA---KGREALAETLIDTELSEEAIKGALAAAPKAVADHGKPQASTY- 310 (349) Q Consensus 235 ~~~~~~~~~~~~~~~~~~~a~~~r~~~I~~~~~~---~~~~~~a~~~~~~~~s~e~a~~~l~~~~~~~~~~~~~~~~~~- 310 (349) ...+. .+...+..++++++|...|.+++.. ...+..++|+.+.+||+|+++.+|++................ T Consensus 256 aaap~----~adirA~~~aae~~r~aaI~a~fa~f~~~~a~l~a~~l~d~~~s~d~ar~~lL~~l~~~~~p~~~~~~~~~ 331 (693) T protein:vir:95 256 AAAPT----EADIRARILAEESGRRSAITAAFGAFSTGHAELLATCLNDMNITVDQAREKLLAAIGADTQPAAALSAGAH 331 (693) T ss_pred cCCCC----cchhhHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHhhcCCCHHHHHHHHHHHHhhccCCCCCcCcCcc Confidence 00001 1112234457778888888888753 344567888999999999999999987753211100000000 Q ss_pred ----cc--------ccccccccccccchhhhhHHHHHHHHHHHHHhhcCCC Q lcl|NC_021560. 311 ----QE--------QRLSAAARLAQPVGENNNRTEMRVDIVADMKRRHGVN 349 (349) Q Consensus 311 ----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~ 349 (349) .. ..+..-.+.......++-+--...++...-..++|+. T Consensus 332 ~~~~~g~~~~d~~~~al~~R~g~~~~~~~n~~~g~~L~elAr~~L~~rg~~ 382 (693) T protein:vir:95 332 IHAGNGNLVGDSVRASVLARIGRGERQADNAYNGMTLRELARASLVDRGIG 382 (693) T ss_pred ccCCchhHHHHHHHHHHHHhcCcccccCCccccCCcHHHHHHHHHHhcCCc Confidence 00 0000000000000000000011223333333344444 No 3 >protein:vir:5743 Length: 117 # NCBI annotation: hypothetical protein # Family: family:all:11389 # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892054;genbank:gi:33770517;interpro:IPR006453;uniprot:Q7Y406;genbank:GeneID:2637487;interpro:IPR013045 Probab=1.41 E-value=46 Score=11.45 Aligned_cols=39 Identities=5% Similarity=-0.027 Sum_probs=14.2 Q ss_pred CeeeeccEEEEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGELLLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-|+.++.+|--..|.+..-..-. .-..-++|+. +...+ T Consensus 79 mRV~~~gr~y~I~~V~d~~~~~r~-Lic~e~~i~~-~~~~~ 117 (117) T protein:vir:57 79 WQIVTTAGVFTVRVVDRVSHADRI-LITGEADIRH-DRTEP 117 (117) T ss_pred CEEEECCEEEEEEeccCCCCCccE-EEEEeccccc-ccCCC Confidence 888888877755555322100000 0000011111 11122 No 4 >protein:vir:5977 Length: 109 # NCBI annotation: hypothetical protein # Family: family:all:788 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690677;genbank:geneid:6329133;genbank:gi:22855071;interpro:IPR013045;uniprot:O48446;genbank:GeneID:955315 Probab=1.19 E-value=55 Score=11.02 Aligned_cols=36 Identities=17% Similarity=0.359 Sum_probs=11.4 Q ss_pred CeeeeccEEE-EeecccccccccccCHHHHHHHHHhcCCCCc-EEEEEecCCCchH Q lcl|NC_021560. 1 MTVLVDGELL-LYGFVGENYWDMGFTAREVIEALAEVGRDAD-ITVRINSGGGYTD 54 (349) Q Consensus 1 ~~~~~~~~I~-i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~-I~l~InSpGG~v~ 54 (349) |-++.++.+| |.+.+. ....... +.|.....|...- T Consensus 72 ~Ri~~~gr~y~I~~v~~------------------d~~~~~~~l~~~~~e~g~~~g 109 (109) T protein:vir:59 72 MRVIYRGKIVTFIGDPV------------------DLSGLQEITRIKGKEDGAYVG 109 (109) T ss_pred cEEEECCeEEEEEeccC------------------CCCCCeEEEEEEEEEeeccCC Confidence 5555555443 222221 1111112 2333333332221 No 5 >protein:vir:95896 Length: 111 # NCBI annotation: ORF049 # Family: family:all:788 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240388;genbank:gi:66396085;genbank:GeneID:5133407 Probab=1.14 E-value=57 Score=10.91 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=17.6 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:95 74 TLFNYEGKTYEVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 467766554322222 1222334444454 No 6 >protein:vir:95069 Length: 111 # NCBI annotation: ORF046 # Family: family:all:788 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240826;genbank:gi:66394713;genbank:GeneID:5133863 Probab=1.13 E-value=57 Score=10.91 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=17.6 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:95 74 TLFNYEGKTYEVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 467766554322222 1222334444454 No 7 >protein:vir:94491 Length: 111 # NCBI annotation: ORF046 # Family: family:all:788 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240679;genbank:gi:66396377;genbank:GeneID:5133755 Probab=1.12 E-value=58 Score=10.89 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=17.6 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:94 74 TLFNYEGKTYEVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 467766554322222 1222334444454 No 8 >protein:vir:93739 Length: 111 # NCBI annotation: ORF043 # Family: family:all:788 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240462;genbank:gi:66396155;genbank:GeneID:5133508 Probab=1.12 E-value=58 Score=10.89 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=17.6 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:93 74 TLFNYEGKTYEVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 467766554322222 1222334444454 No 9 >protein:vir:97429 Length: 111 # NCBI annotation: ORF046 # Family: family:all:788 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240752;genbank:gi:66396450;genbank:GeneID:5133785 Probab=1.12 E-value=58 Score=10.89 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=17.6 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:97 74 TLFNYEGKTYEVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 467766554322222 1222334444454 No 10 >protein:vir:97328 Length: 111 # NCBI annotation: ORF043 # Family: family:all:788 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240614;genbank:gi:66396306;genbank:GeneID:5133684 Probab=1.12 E-value=58 Score=10.89 Aligned_cols=37 Identities=8% Similarity=-0.088 Sum_probs=17.7 Q ss_pred CeeeeccEE-EEeecccccccccccCHHHHHHHHHhcCCCCc Q lcl|NC_021560. 1 MTVLVDGEL-LLYGFVGENYWDMGFTAREVIEALAEVGRDAD 41 (349) Q Consensus 1 ~~~~~~~~I-~i~G~I~~~~~~~~~~a~~~~~~l~~~~~~~~ 41 (349) |-+..+++| .|.|++.+...-..+ .+-.++..+..|+ T Consensus 74 mri~yegRi~~I~s~pvDqgg~hei----~~~~~k~~~~~~~ 111 (111) T protein:vir:97 74 TLFNYEGKTYKVVGEPVDQGGQHEI----NLTRLRVRPIGKG 111 (111) T ss_pred ceEEECCeEEEEeccccCCCcchhh----hhheeeeccccCC Confidence 777666654 477766554322222 1222334444454 Done!