Query lcl|NC_021306.1_cdsid_YP_008051640.1 [gene=15] [protein=hypothetical protein] [protein_id=YP_008051640.1] [location=9191..9526] Match_columns 111 No_of_seqs 1 out of 4 Neff 1.0 Searched_HMMs 1612 Date Thu Nov 7 18:54:42 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_15 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_15_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:101653 Length: 111 100.0 7.1E-57 4.4E-60 328.4 6.9 111 1-111 1-111 (111) 2 protein:vir:7858 Length: 111 # 100.0 7.1E-57 4.4E-60 328.4 6.9 111 1-111 1-111 (111) 3 protein:vir:8431 Length: 114 # 100.0 4.9E-45 3E-48 263.5 6.6 106 2-111 1-114 (114) 4 protein:vir:8105 Length: 131 # 100.0 4.5E-40 2.8E-43 236.3 7.0 105 1-111 2-131 (131) 5 protein:vir:8328 Length: 119 # 97.0 5.6E-06 3.5E-09 49.4 6.6 107 2-111 1-119 (119) 6 protein:vir:80934 Length: 120 40.1 0.8 0.0005 21.1 5.5 92 1-105 10-120 (120) 7 protein:vir:44 Length: 120 # N 38.4 0.94 0.00058 20.7 5.6 92 1-105 10-120 (120) 8 protein:vir:96107 Length: 133 28.0 0.67 0.00042 21.5 3.0 102 1-104 13-133 (133) 9 protein:vir:99571 Length: 131 12.8 4.9 0.0031 16.8 4.4 109 1-111 13-126 (131) 10 protein:vir:107716 Length: 132 8.4 4.8 0.003 16.9 2.5 107 1-108 13-132 (132) No 1 >protein:vir:101653 Length: 111 # NCBI annotation: gp16 # Family: family:all:3991 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654771;genbank:gi:109302769;genbank:GeneID:4156087 Probab=100.00 E-value=7.1e-57 Score=328.42 Aligned_cols=111 Identities=100% Similarity=1.568 Sum_probs=110.9 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCCcccccccCCCCcceeeccCCeeee Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDRCLAPPVPAAVACKAGDKLIF 80 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatdrclappvpaavackagdklif 80 (111) |||+|++|||||||++|+++|+|+||++++++++++||+||||++|||+++|++|++|+||+|||+||++||||+|+||| T Consensus 1 ~e~fG~~tVtfV~i~e~~~~~~G~~~~v~~T~~~~pgc~frPl~~~~~~~~va~~~~t~~~~app~pa~lA~k~~~~li~ 80 (111) T protein:vir:10 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDRCLAPPVPAAVACKAGDKLIF 80 (111) T ss_pred CccccCceEEEEEeccCCCCCCCCccchheeecCCCceeeccccccccccccccccccccccCCCcceEEEeCCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred echhhheehhcccccccceeeeeeeeecccC Q lcl|NC_021306. 81 HGVSHLVLGVRDHWDKGKLHHLTVITKRWEQ 111 (111) Q Consensus 81 hgvshlvlgvrdhwdkgklhhltvitkrweq 111 (111) |||+|+++|++++||+||+||+|+|+||||| T Consensus 81 dGv~~~i~G~~~~f~dg~~~~~TIi~kR~e~ 111 (111) T protein:vir:10 81 HGVSHLVLGVRDHWDKGKLHHLTVITKRWEQ 111 (111) T ss_pred cceeeEEeeeeeeccCCCceEEEEEeeeccC Confidence 9999999999999999999999999999999 No 2 >protein:vir:7858 Length: 111 # NCBI annotation: gp15 # Family: family:all:3991 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817465;genbank:gi:29565894;genbank:GeneID:1259087 Probab=100.00 E-value=7.1e-57 Score=328.42 Aligned_cols=111 Identities=100% Similarity=1.568 Sum_probs=110.9 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCCcccccccCCCCcceeeccCCeeee Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDRCLAPPVPAAVACKAGDKLIF 80 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatdrclappvpaavackagdklif 80 (111) |||+|++|||||||++|+++|+|+||++++++++++||+||||++|||+++|++|++|+||+|||+||++||||+|+||| T Consensus 1 ~e~fG~~tVtfV~i~e~~~~~~G~~~~v~~T~~~~pgc~frPl~~~~~~~~va~~~~t~~~~app~pa~lA~k~~~~li~ 80 (111) T protein:vir:78 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDRCLAPPVPAAVACKAGDKLIF 80 (111) T ss_pred CccccCceEEEEEeccCCCCCCCCccchheeecCCCceeeccccccccccccccccccccccCCCcceEEEeCCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred echhhheehhcccccccceeeeeeeeecccC Q lcl|NC_021306. 81 HGVSHLVLGVRDHWDKGKLHHLTVITKRWEQ 111 (111) Q Consensus 81 hgvshlvlgvrdhwdkgklhhltvitkrweq 111 (111) |||+|+++|++++||+||+||+|+|+||||| T Consensus 81 dGv~~~i~G~~~~f~dg~~~~~TIi~kR~e~ 111 (111) T protein:vir:78 81 HGVSHLVLGVRDHWDKGKLHHLTVITKRWEQ 111 (111) T ss_pred cceeeEEeeeeeeccCCCceEEEEEeeeccC Confidence 9999999999999999999999999999999 No 3 >protein:vir:8431 Length: 114 # NCBI annotation: gp26 # Family: family:all:3991 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818327;genbank:gi:29566763;genbank:GeneID:1260060 Probab=100.00 E-value=4.9e-45 Score=263.51 Aligned_cols=106 Identities=37% Similarity=0.623 Sum_probs=103.5 Q ss_pred cccccceeeeeeecCCc--ccccccccccccccccceeeccccc----ceeEEeeeeecCCcccccccCCCCcceeeccC Q lcl|NC_021306. 2 ERIGEDTVTFVQIGKGA--KSDRGIPQAVEESSTDVQWCSFQPL----GVHYHVTDVSLPDATDRCLAPPVPAAVACKAG 75 (111) Q Consensus 2 erigedtvtfvqigkga--ksdrgipqaveesstdvqwcsfqpl----gvhyhvtdvslpdatdrclappvpaavackag 75 (111) -++|++|||||||++++ ++|+|+|++++ ++++++||+|||| ++|||++++++|+ ||+|||+||++||||+ T Consensus 1 m~fG~~tVtfV~i~e~~~~~~~~G~~~~vr-T~~~~pgc~frPlt~~e~~~~~~~~~t~~w---k~taPp~~av~A~k~~ 76 (114) T protein:vir:84 1 MKFGGQTVTFVTITEDLDDRDDYGNPREIR-TEVPVPGCRFRPLTAKEKVEFGYNTVADPW---RCTAPPVPAVMAAGAT 76 (114) T ss_pred CccCCceEEEEEeccCCCCCCCCCCchhhe-eecCCCceeecccccccccccceeecccch---hhccCcchhheeeCCC Confidence 57999999999999877 79999999998 9999999999999 9999999999998 9999999999999999 Q ss_pred Ceeeeechhhheehhcccccc--cceeeeeeeeecccC Q lcl|NC_021306. 76 DKLIFHGVSHLVLGVRDHWDK--GKLHHLTVITKRWEQ 111 (111) Q Consensus 76 dklifhgvshlvlgvrdhwdk--gklhhltvitkrweq 111 (111) |+||||||+|+++|.+++||+ ||+||+|+|+||||- T Consensus 77 ~~li~dGv~~~i~G~~~~f~~~~Gk~~~~TIi~kR~e~ 114 (114) T protein:vir:84 77 GELIYDGVTYEITGGARTFPNFAGKPFKVTIICERREV 114 (114) T ss_pred CeEEEcceeeEEecchhhccccCCceeEEEEEeeeecC Confidence 999999999999999999999 999999999999999 No 4 >protein:vir:8105 Length: 131 # NCBI annotation: gp9 # Family: family:all:3991 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817686;genbank:gi:29566117;genbank:GeneID:1259311 Probab=100.00 E-value=4.5e-40 Score=236.28 Aligned_cols=105 Identities=30% Similarity=0.478 Sum_probs=102.9 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCC-----ccc--ccccCCCCcceeec Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPD-----ATD--RCLAPPVPAAVACK 73 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpd-----atd--rclappvpaavack 73 (111) -|++|++|||||+|++|+++++|+|+|.++++++++||+|+|| |++++|| ||| ||+|||+||++||| T Consensus 2 ~e~fG~qtVtfV~i~e~~~~~~g~~~a~~rT~t~~pgc~frPl------t~~et~d~q~nvat~~Wk~taPPt~av~A~k 75 (131) T protein:vir:81 2 SEEFGGQVVALVGVAETGAPGWGGLKAKARTTTRQPGVHFRPA------SSIETPDGQTNVATEVWKLTAPPTAAVLAAK 75 (131) T ss_pred ccccccceEEEEEeccCCCCCCCCccceeeeecCCCceeeccc------cccccccccccccccceeccCCCchheeEeC Confidence 7999999999999999999999999999999999999999999 9999999 999 99999999999999 Q ss_pred cCCeeeeechhhheehhcc---------cccc---------cceeeeeeeeecccC Q lcl|NC_021306. 74 AGDKLIFHGVSHLVLGVRD---------HWDK---------GKLHHLTVITKRWEQ 111 (111) Q Consensus 74 agdklifhgvshlvlgvrd---------hwdk---------gklhhltvitkrweq 111 (111) ++|+||||||+|++++++| |||+ ||+||+|+|+||--- T Consensus 76 ~~~eli~dGve~~~~~~~ds~~G~a~tFh~d~~~~~~~d~~Gk~~~vTIi~kR~~g 131 (131) T protein:vir:81 76 PDGELVYDGTEHPEALDLDSAAGRAATFHIDGPIMPKYDLDGQVHHVTIMCKRQAG 131 (131) T ss_pred CCCeEEEccccccccccccccccceeeeccccccccccccCCceeEEEEEeeeccC Confidence 9999999999999999999 9999 999999999999666 No 5 >protein:vir:8328 Length: 119 # NCBI annotation: gp45 # Family: family:all:3991 # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817896;genbank:gi:29566329;genbank:GeneID:1259524 Probab=96.97 E-value=5.6e-06 Score=49.38 Aligned_cols=107 Identities=25% Similarity=0.367 Sum_probs=75.7 Q ss_pred cccccceeeeeeecCCccc-ccccccccccccccceeecccccceeEEeeeeecCCccc--ccccC-------CCCccee Q lcl|NC_021306. 2 ERIGEDTVTFVQIGKGAKS-DRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATD--RCLAP-------PVPAAVA 71 (111) Q Consensus 2 erigedtvtfvqigkgaks-drgipqaveesstdvqwcsfqplgvhyhvtdvslpdatd--rclap-------pvpaava 71 (111) -..|..|||||-+-.++.. +-|.+..+. ..+.+-=|.|.||-.--- -|...--||+ +|-+| |+|+..| T Consensus 1 m~FGgqtVtfV~~td~~~pg~~G~~~~~r-Tev~~PGcrfRPlt~~Et-~e~q~nvat~~Wk~TaP~~~~~~~p~~av~A 78 (119) T protein:vir:83 1 MPFGASTVTFVVHTDGATPGELGTYPQVK-TEVSAPGCRHRPLTFRET-AELQFDVATQIWKTTLPVGEYSPTLLSQIRA 78 (119) T ss_pred CCcCceeEEEEEEeccCCccccCCcccee-eecCCCceeeccccceec-cccccccccceeeeccCccccccccchhhee Confidence 4689999999999876654 445544332 234456799999854211 1222223444 89999 9999999 Q ss_pred eccCCeeeeechhhheehhccccc--ccceeeeeeeeecccC Q lcl|NC_021306. 72 CKAGDKLIFHGVSHLVLGVRDHWD--KGKLHHLTVITKRWEQ 111 (111) Q Consensus 72 ckagdklifhgvshlvlgvrdhwd--kgklhhltvitkrweq 111 (111) .++-|.|++-||.|-..|--.-+| .| --|.|+|.||--- T Consensus 79 a~pdgel~yDGveysi~Gga~tF~~faG-PfkvTIickR~~g 119 (119) T protein:vir:83 79 VQPDDTIRVDGVEYSIIGGVQIFDDFAG-PFKATIISKRHIG 119 (119) T ss_pred eCCCCcEEEcceeeeeecceeeccccCC-ceEEEEEeeeccC Confidence 999999999999999888554442 24 5699999999666 No 6 >protein:vir:80934 Length: 120 # NCBI annotation: gp9 # Family: family:all:2747 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468395;genbank:gi:157324969;genbank:GeneID:5601367 Probab=40.12 E-value=0.8 Score=21.11 Aligned_cols=92 Identities=15% Similarity=0.198 Sum_probs=51.2 Q ss_pred Cc----ccccceeeee-eecCCcccccccccccccccccceeecccccceeEEeeeeecCCcccc--------ccc---C Q lcl|NC_021306. 1 ME----RIGEDTVTFV-QIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDR--------CLA---P 64 (111) Q Consensus 1 me----rigedtvtfv-qigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatdr--------cla---p 64 (111) |- |.=-|++|+- +.|+|.-. +.+-.....+.=|.|||- +.+|.-.-.+. |-| - T Consensus 10 m~~iPk~~l~~sit~k~~~~~d~~g-----~~~y~~pv~I~nvRvd~~------~~ysg~~n~rq~~~naviFi~a~~S~ 78 (120) T protein:vir:80 10 APPLPLDWLIHNISYEAYKEEGRHN-----QVVYEKGFEIEHVRVDFS------KSNQIAGLSDSDRYDAVIFIDAVNSM 78 (120) T ss_pred cCCcChhhccceEEEEEecCCCCCC-----CccccCceeccCeEEecc------eeeecCCCCceeeeeeEEEEecccCC Confidence 32 3334666653 34443211 222223344677888872 22332211111 111 2 Q ss_pred CCCcceeeccCCeeeeechhhheehhcccc-cccceee--eeee Q lcl|NC_021306. 65 PVPAAVACKAGDKLIFHGVSHLVLGVRDHW-DKGKLHH--LTVI 105 (111) Q Consensus 65 pvpaavackagdklifhgvshlvlgvrdhw-dkgklhh--ltvi 105 (111) |+ ..--|.|.|++|-|-.+.+-++-+-. ..|++|| |.|| T Consensus 79 p~--~~~~~~gskI~f~G~eytI~~i~~~~~~s~~vh~yEleVi 120 (120) T protein:vir:80 79 NV--PDDFISRSRIFFSGKAYKIVKVIPCYATSENVHHWEIEVI 120 (120) T ss_pred cc--ceecccCCEEEeCCceEEEEEeeeccCCCCceeEEEEEeC Confidence 22 23457799999999999999998876 5688998 4567 No 7 >protein:vir:44 Length: 120 # NCBI annotation: gp9 # Family: family:all:2747 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463470;swissprot:trembl:q9t1b4;genbank:gi:16798792;uniprot:Q9T1B4;genbank:GeneID:922373 Probab=38.40 E-value=0.94 Score=20.74 Aligned_cols=92 Identities=15% Similarity=0.210 Sum_probs=50.9 Q ss_pred Cc----ccccceeeee-eecCCcccccccccccccccccceeecccccceeEEeeeeecCCcccc--------ccc---C Q lcl|NC_021306. 1 ME----RIGEDTVTFV-QIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATDR--------CLA---P 64 (111) Q Consensus 1 me----rigedtvtfv-qigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatdr--------cla---p 64 (111) |- |.=-|++|+- +.|++.- -+.+-.....+.=|.|||- +.+|.-.-.+. |-| - T Consensus 10 m~~iPk~~l~~sit~k~~~~~d~~-----g~~~y~~pv~I~nvRvd~~------~~ysg~~n~rq~~~naviFi~a~~S~ 78 (120) T protein:vir:44 10 APPLPLDWLIHNISYEAYKEEDRH-----NQVVYEKGIEIEHVRVDFS------KSNQIAGLSDSDRYDAVIFIDAVNSM 78 (120) T ss_pred cCCcChhhccceEEEEEecCCCCC-----CCCcccCceeccCeEEecc------eeeecCCCCceeeeeeEEEEecccCC Confidence 32 2334666653 3443321 1222223344677888872 22332211111 111 2 Q ss_pred CCCcceeeccCCeeeeechhhheehhcccc-cccceee--eeee Q lcl|NC_021306. 65 PVPAAVACKAGDKLIFHGVSHLVLGVRDHW-DKGKLHH--LTVI 105 (111) Q Consensus 65 pvpaavackagdklifhgvshlvlgvrdhw-dkgklhh--ltvi 105 (111) |+| .--|.|.|++|-|-.+.+-++-+-. ..|++|| |.|| T Consensus 79 p~~--~~~~~gskI~f~G~eytI~~i~~~~~~sn~vh~yEleVi 120 (120) T protein:vir:44 79 NVP--SDFVSRSRIFFSGKAYKIVKVIPCYATSNSVHHWEIEVI 120 (120) T ss_pred ccc--eecCcCCEEEeCCceEEEEeeeeccCCCCceEEEEEEeC Confidence 222 3347799999999999999998876 5688998 4567 No 8 >protein:vir:96107 Length: 133 # NCBI annotation: conserved hypothetical protein ORF026 # Family: family:all:7161 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294443;genbank:gi:149408340;genbank:GeneID:5237226 Probab=27.98 E-value=0.67 Score=21.53 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=65.1 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCCccc-ccccCC--CCcceeeccCCe Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATD-RCLAPP--VPAAVACKAGDK 77 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatd-rclapp--vpaavackagdk 77 (111) ..-|+..+|-+.....-.+.++|-=.++-++..+++ ||.||..-- -+.+.-|--..+ +-|-++ +-+----+|||. T Consensus 13 ~~VI~~Q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i~-gS~Q~V~~~-~v~~~GLd~~~~Yv~lf~s~~i~~iqRg~agD~ 90 (133) T protein:vir:96 13 FSVIGTQLVQYRKFEQRTKNSQAQYVSVFGEPFQLA-ASIQRVRRD-QYVQFNLEFQRNYVMIFANFEMVDLDRDLAGDQ 90 (133) T ss_pred hhhhccccchhhcccccccccccceeeeecCCccce-eeEEecChh-heeecCcceeeeeeEeecCcceeecccCCCCCE Confidence 567889999999988899999999999999999998 999986422 223333321111 111111 112222468999 Q ss_pred eeeechhhheehhccccccc----------------ceeeeee Q lcl|NC_021306. 78 LIFHGVSHLVLGVRDHWDKG----------------KLHHLTV 104 (111) Q Consensus 78 lifhgvshlvlgvrdhwdkg----------------klhhltv 104 (111) |||||=-|=|.|+.|..-.. .--.||+ T Consensus 91 liwnGrr~~v~g~~dW~~QDGW~~~lcv~~G~~~ga~~~~~~~ 133 (133) T protein:vir:96 91 FIWTGRVFQLESQGSWFYQDGWGVCLAVDIGTAKLAEDGTLTF 133 (133) T ss_pred EEECCeEEEecccceeeeeccceEEEEEeecCCCCcCCceecC Confidence 99999999999987643210 0111222 No 9 >protein:vir:99571 Length: 131 # NCBI annotation: hypothetical protein # Family: family:all:7161 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039798;genbank:gi:126011048;genbank:GeneID:4818266 Probab=12.76 E-value=4.9 Score=16.78 Aligned_cols=109 Identities=17% Similarity=0.148 Sum_probs=62.0 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCCccc-ccccCC--CCcceeeccCCe Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATD-RCLAPP--VPAAVACKAGDK 77 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatd-rclapp--vpaavackagdk 77 (111) ..-|+..+|-+...-.-.+.++|-=.++-++..++ =||.||..-- -+++.-|--..+ +-|--| +-+----+|||. T Consensus 13 ~~VI~~Q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i-~gS~Q~V~~~-~v~~~GLd~~~~Yv~lfts~~i~~iqRg~agD~ 90 (131) T protein:vir:99 13 ASVIALTPVPYLRFTQRVLNPARQWITTYAAAVDV-PMSVQRVPRN-KYVQFGLEFQRNYVRLFAPIEMVDLDRDCGGDM 90 (131) T ss_pred hhhhccccchhhcccccccccccceeeeecCCccc-eeeEEecChh-heeecCcceeeeEEEEeecCcceecccCCCCCE Confidence 55688888888877777888999888888888888 6888875421 122222211110 011111 112222468999 Q ss_pred eeeechhhheehhcccccccc-eeeeee-eeecccC Q lcl|NC_021306. 78 LIFHGVSHLVLGVRDHWDKGK-LHHLTV-ITKRWEQ 111 (111) Q Consensus 78 lifhgvshlvlgvrdhwdkgk-lhhltv-itkrweq 111 (111) |||+|=-|=|.|+.|..-..- ---|-| +--|=.| T Consensus 91 liwnGrr~~v~g~~dW~~QDGW~~~lcv~~Gi~~~~ 126 (131) T protein:vir:99 91 IIWHGRQHKIESQNTWYLQDGWAMSLAVDLGIRSDQ 126 (131) T ss_pred EEECCeEEEecccceeeeeccceEEEEEEeecccCc Confidence 999999999999876432111 111111 1112222 No 10 >protein:vir:107716 Length: 132 # NCBI annotation: gp19 # Family: family:all:7161 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024867;genbank:gi:48697509;genbank:GeneID:2948332 Probab=8.45 E-value=4.8 Score=16.86 Aligned_cols=107 Identities=22% Similarity=0.205 Sum_probs=60.0 Q ss_pred CcccccceeeeeeecCCcccccccccccccccccceeecccccceeEEeeeeecCCccc-cccc-CC--CCcceeeccCC Q lcl|NC_021306. 1 MERIGEDTVTFVQIGKGAKSDRGIPQAVEESSTDVQWCSFQPLGVHYHVTDVSLPDATD-RCLA-PP--VPAAVACKAGD 76 (111) Q Consensus 1 merigedtvtfvqigkgaksdrgipqaveesstdvqwcsfqplgvhyhvtdvslpdatd-rcla-pp--vpaavackagd 76 (111) ..-|+..+|-+...-.-.+.++|-=.++-++..++.=||.||..-- -+++.-|--..+ +-|- |- +-+----+||| T Consensus 13 ~~vI~~q~V~y~rf~~Rt~n~~gq~i~~y~~p~~i~~gS~Q~V~~~-~v~~~GLd~~~~Yv~lf~s~~~i~~iqRg~agD 91 (132) T protein:vir:10 13 LGLIASETVEYFAETGRTKQPNGVFIASYASPVPIEECSVQAVDRS-KYTDLGLDFQKTYVTWFVPNQAFTTIKRGKAGD 91 (132) T ss_pred hhhhccccchhhcccccccccccceeeeecCCcccccceeeecChh-hheecccceeeeeeeEeecchhhhhcccCCCCC Confidence 5568888888777766788899988888887777777888875421 122222211110 0111 11 11112246899 Q ss_pred eeeeechhhheehhcccccccc-eeeeee--------eeec Q lcl|NC_021306. 77 KLIFHGVSHLVLGVRDHWDKGK-LHHLTV--------ITKR 108 (111) Q Consensus 77 klifhgvshlvlgvrdhwdkgk-lhhltv--------itkr 108 (111) .|||||=-|=|.|+.|..-..- ---|-| +|.- T Consensus 92 ~liwnGrr~~v~g~~dW~~QDGW~~~lcv~~G~~~ga~~~~ 132 (132) T protein:vir:10 92 VLEWNGGRYQMNGGIDWTGQDSWGTATCVLIGPATGALTNG 132 (132) T ss_pred EEEECCeEEEecccceeeeeccceEEEEEEecCccceecCC Confidence 9999999999999876432110 000000 0111 Done!