Query lcl|NC_020479.1_cdsid_YP_007517562.1 [gene=I906_gp18] [protein=hypothetical protein] [protein_id=YP_007517562.1] [location=10804..11196] Match_columns 130 No_of_seqs 104 out of 176 Neff 6.1 Searched_HMMs 1612 Date Thu Nov 7 15:49:39 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_18 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_18_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:99848 Length: 172 100.0 1.2E-44 7.4E-48 261.4 13.2 128 1-130 3-172 (172) 2 protein:vir:79074 Length: 150 100.0 4.6E-42 2.8E-45 247.2 13.2 128 1-130 2-150 (150) 3 protein:vir:107864 Length: 150 100.0 4E-42 2.5E-45 247.6 12.6 128 1-130 2-150 (150) 4 protein:vir:1993 Length: 141 # 100.0 1.2E-41 7.6E-45 244.9 13.5 123 1-130 2-140 (141) 5 protein:vir:99222 Length: 138 100.0 1.1E-40 6.6E-44 239.7 13.4 121 1-127 2-138 (138) 6 protein:vir:79253 Length: 138 100.0 1.1E-40 6.6E-44 239.7 13.4 121 1-127 2-138 (138) 7 protein:vir:103846 Length: 138 100.0 2.7E-40 1.7E-43 237.5 13.3 121 1-130 2-138 (138) 8 protein:vir:2505 Length: 128 # 95.6 2.4E-05 1.5E-08 45.9 3.1 107 1-130 6-113 (128) 9 protein:vir:98481 Length: 136 94.7 0.0018 1.1E-06 35.6 10.6 114 1-130 3-134 (136) 10 protein:vir:9576 Length: 131 # 94.5 0.00022 1.4E-07 40.6 5.1 113 1-130 3-122 (131) 11 protein:vir:94761 Length: 132 94.5 0.00027 1.6E-07 40.2 5.5 113 1-130 3-123 (132) 12 protein:vir:9761 Length: 140 # 93.9 0.00057 3.5E-07 38.4 6.1 120 1-125 3-140 (140) 13 protein:vir:1640 Length: 132 # 92.9 0.00096 6E-07 37.1 5.7 114 1-130 3-123 (132) 14 protein:vir:2432 Length: 124 # 90.4 0.012 7.5E-06 31.1 9.0 111 1-124 2-124 (124) 15 protein:vir:80389 Length: 172 89.6 0.0059 3.7E-06 32.8 6.7 116 1-129 16-172 (172) 16 protein:vir:80967 Length: 131 86.3 0.043 2.7E-05 28.1 9.2 111 1-130 2-117 (131) 17 protein:vir:43 Length: 131 # N 85.4 0.049 3E-05 27.8 9.1 110 1-130 2-117 (131) 18 protein:vir:94507 Length: 113 84.0 0.058 3.6E-05 27.4 8.9 102 2-123 1-113 (113) 19 protein:vir:4831 Length: 105 # 83.6 0.057 3.5E-05 27.4 8.6 97 1-99 1-105 (105) 20 protein:vir:7773 Length: 123 # 82.4 0.047 2.9E-05 27.9 7.7 111 1-124 2-123 (123) 21 protein:vir:486 Length: 107 # 82.3 0.057 3.5E-05 27.4 8.1 96 1-103 1-107 (107) 22 protein:vir:97145 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 23 protein:vir:96221 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 24 protein:vir:99796 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 25 protein:vir:96390 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 26 protein:vir:78849 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 27 protein:vir:9311 Length: 110 # 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 28 protein:vir:103957 Length: 110 81.5 0.085 5.3E-05 26.5 8.8 100 2-123 1-110 (110) 29 protein:vir:81159 Length: 95 # 81.2 0.088 5.5E-05 26.4 9.0 94 1-102 2-95 (95) 30 protein:vir:106596 Length: 128 80.8 0.042 2.6E-05 28.1 6.9 101 1-123 18-128 (128) 31 protein:vir:2738 Length: 112 # 80.6 0.093 5.8E-05 26.2 8.9 100 1-123 1-112 (112) 32 protein:vir:97267 Length: 172 77.6 0.039 2.4E-05 28.3 5.6 118 1-126 17-172 (172) 33 protein:vir:3970 Length: 110 # 76.6 0.1 6.5E-05 26.0 7.7 99 2-123 1-110 (110) 34 protein:vir:4458 Length: 107 # 76.4 0.14 8.4E-05 25.3 8.4 96 1-98 1-107 (107) 35 protein:vir:4228 Length: 125 # 75.4 0.15 9.1E-05 25.1 9.0 110 1-124 2-125 (125) 36 protein:vir:4512 Length: 107 # 75.1 0.15 9.4E-05 25.1 8.3 96 1-105 1-107 (107) 37 protein:vir:102863 Length: 96 74.9 0.15 9.5E-05 25.1 9.0 96 1-112 1-96 (96) 38 protein:vir:105005 Length: 96 74.9 0.15 9.5E-05 25.1 9.0 96 1-112 1-96 (96) 39 protein:vir:107614 Length: 96 74.9 0.15 9.5E-05 25.1 9.0 96 1-112 1-96 (96) 40 protein:vir:102083 Length: 96 74.9 0.15 9.5E-05 25.1 9.0 96 1-112 1-96 (96) 41 protein:vir:3615 Length: 110 # 74.2 0.14 8.5E-05 25.3 7.7 100 2-123 1-110 (110) 42 protein:vir:95004 Length: 169 72.5 0.056 3.5E-05 27.5 5.1 113 1-125 16-169 (169) 43 protein:vir:99517 Length: 124 71.9 0.18 0.00011 24.6 7.8 108 1-127 5-124 (124) 44 protein:vir:100245 Length: 113 70.5 0.21 0.00013 24.3 8.9 96 1-100 2-113 (113) 45 protein:vir:95176 Length: 172 67.6 0.24 0.00015 24.0 7.5 110 1-122 18-172 (172) 46 protein:vir:94955 Length: 170 67.5 0.059 3.7E-05 27.3 4.1 111 1-125 15-170 (170) 47 protein:vir:4857 Length: 104 # 67.5 0.25 0.00016 23.9 9.2 98 1-102 1-104 (104) 48 protein:vir:741 Length: 110 # 64.1 0.31 0.00019 23.4 9.4 100 2-123 1-110 (110) 49 protein:vir:78383 Length: 169 64.0 0.31 0.00019 23.4 7.4 113 1-125 16-169 (169) 50 protein:vir:96488 Length: 113 63.1 0.32 0.0002 23.3 8.3 99 2-123 1-113 (113) 51 protein:vir:78478 Length: 149 61.5 0.35 0.00022 23.1 8.5 115 1-130 2-147 (149) 52 protein:vir:78254 Length: 149 61.5 0.35 0.00022 23.1 8.5 115 1-130 2-147 (149) 53 protein:vir:79050 Length: 133 60.9 0.28 0.00017 23.6 6.5 118 1-130 5-133 (133) 54 protein:vir:4904 Length: 113 # 60.9 0.36 0.00023 23.0 8.2 100 1-123 2-113 (113) 55 protein:vir:4998 Length: 106 # 60.5 0.37 0.00023 22.9 9.3 103 1-112 1-106 (106) 56 protein:vir:1329 Length: 122 # 60.2 0.24 0.00015 24.0 6.0 110 1-124 2-122 (122) 57 protein:vir:104088 Length: 125 58.2 0.42 0.00026 22.7 8.3 112 1-124 2-125 (125) 58 protein:vir:98900 Length: 132 57.9 0.41 0.00025 22.7 6.9 113 1-130 2-132 (132) 59 protein:vir:1887 Length: 108 # 56.6 0.45 0.00028 22.5 8.8 101 1-113 7-108 (108) 60 protein:vir:192 Length: 108 # 56.6 0.45 0.00028 22.5 8.8 101 1-113 7-108 (108) 61 protein:vir:1026 Length: 107 # 55.9 0.47 0.00029 22.4 7.8 103 1-118 1-107 (107) 62 protein:vir:2345 Length: 125 # 55.4 0.48 0.0003 22.3 7.8 112 1-124 3-125 (125) 63 protein:vir:107756 Length: 147 53.8 0.32 0.0002 23.3 5.6 101 1-130 1-105 (147) 64 protein:vir:5256 Length: 119 # 51.0 0.59 0.00037 21.8 7.2 95 2-130 1-95 (119) 65 protein:vir:93592 Length: 108 50.1 0.62 0.00038 21.7 7.2 96 1-102 3-108 (108) 66 protein:vir:4702 Length: 113 # 50.0 0.62 0.00039 21.7 9.9 102 1-113 1-113 (113) 67 protein:vir:9877 Length: 114 # 45.5 0.77 0.00048 21.2 9.0 98 1-123 1-114 (114) 68 protein:vir:102158 Length: 99 45.0 0.78 0.00049 21.2 9.4 94 1-101 1-99 (99) 69 protein:vir:4954 Length: 104 # 43.3 0.85 0.00053 21.0 9.3 103 1-112 1-104 (104) 70 protein:vir:9928 Length: 118 # 41.2 0.94 0.00058 20.7 8.5 105 1-117 1-118 (118) 71 protein:vir:9412 Length: 110 # 39.3 1 0.00063 20.5 8.8 106 1-122 1-110 (110) 72 protein:vir:95774 Length: 115 38.7 1.1 0.00065 20.5 8.6 102 1-123 1-115 (115) 73 protein:vir:4602 Length: 110 # 38.4 1.1 0.00066 20.4 9.4 99 1-101 1-110 (110) 74 protein:vir:9821 Length: 138 # 37.9 0.33 0.0002 23.2 3.0 110 1-130 7-123 (138) 75 protein:vir:1384 Length: 92 # 37.7 1.1 0.00068 20.3 8.8 91 3-112 1-92 (92) 76 protein:vir:99002 Length: 158 32.5 1.4 0.00088 19.7 9.2 126 1-130 3-156 (158) 77 protein:vir:6243 Length: 122 # 30.3 1.6 0.00098 19.5 5.5 110 1-124 2-122 (122) 78 protein:vir:106583 Length: 105 26.0 2 0.0012 18.9 8.6 92 1-101 1-105 (105) 79 protein:vir:98340 Length: 110 23.6 2.3 0.0014 18.6 8.6 106 1-122 1-110 (110) 80 protein:vir:79990 Length: 110 23.6 2.3 0.0014 18.6 8.6 106 1-122 1-110 (110) 81 protein:vir:3992 Length: 107 # 22.6 2.4 0.0015 18.5 9.0 103 1-118 1-107 (107) 82 protein:vir:7410 Length: 107 # 20.0 2.8 0.0018 18.1 7.9 103 1-118 1-107 (107) No 1 >protein:vir:99848 Length: 172 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164077;genbank:gi:56692609;genbank:GeneID:3192576 Probab=100.00 E-value=1.2e-44 Score=261.39 Aligned_cols=128 Identities=19% Similarity=0.299 Sum_probs=111.6 Q ss_pred CCCCHHHHHHHhccC-------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhhh- Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-------------------------------------SKQVTDELLTKYIKEASNYIDARLGVA- 42 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-------------------------------------~~~~d~~~v~~Al~dA~~eID~YL~~R- 42 (130) ||||++||+.+|||. .+.+|+++|++||+||+++|||||++| T Consensus 3 mYaT~~dl~~r~g~~el~qLt~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~g~~d~~~i~~Al~dA~aeIDgYL~~R~ 82 (172) T protein:vir:99 3 VYITLPELAERPGAEELSQAATPRPLQAVDSELLDALLRGLPVDRWTPEEIEVGHATVEVINSAVSDAQGYIDGFLQRRG 82 (172) T ss_pred ccccHHHHHhhcCHHHHHHHhccccccCCHHHHHHHhhcchhhhhcccccccccccCHHHHHHHHHHHHHHHHHHHhccc Confidence 999999999999962 257899999999999999999999999 Q ss_pred ccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCC---CccceeeecCC Q lcl|NC_020479. 43 YKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVK---LPAGFGTTTDG 119 (130) Q Consensus 43 Y~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~---~~~g~~~~~~~ 119 (130) |.|||++||++|+++|||||||+||.+++.. ....+++++||++|| |||++|++||++||++.. ++++.+.++++ T Consensus 83 Y~lPL~~vP~~L~~~a~dIArY~L~~~r~~~-~~~~e~v~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~v~~~ 160 (172) T protein:vir:99 83 YSLPLAKRYGVVTGWTRAIARYLLHQDRLGP-GAEKDPIVRDYRDAL-KFLQLIAEGKFSLGPDDPLTPPGGGVPQVLAP 160 (172) T ss_pred ccCCCcccchHHHHHHHHHHHHHHHhccCCc-ccCCHHHHHHHHHHH-HHHHHHhcCccccCCCCCCCCCCCCceeeecC Confidence 9999999999999999999999999887543 223578999999999 799999999999997432 23345667889 Q ss_pred CcccCCCC-CCC Q lcl|NC_020479. 120 EQIFTLDR-PEW 130 (130) Q Consensus 120 ~rvF~R~~-~~w 130 (130) +|+|+|++ +.| T Consensus 161 ~r~F~rd~L~gf 172 (172) T protein:vir:99 161 ARTFSHDTLKDY 172 (172) T ss_pred CCccChhhccCC Confidence 99999999 667 No 2 >protein:vir:79074 Length: 150 # NCBI annotation: gp10, conserved hypothetical protein # Family: family:all:348 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111210;genbank:gi:134288797;genbank:GeneID:4960748 Probab=100.00 E-value=4.6e-42 Score=247.22 Aligned_cols=128 Identities=20% Similarity=0.330 Sum_probs=111.9 Q ss_pred CCCCHHHHHHHhccC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-----------------SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLAR 63 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-----------------~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIAr 63 (130) =|||.+||+.+|||. .+++|+++|++||+||+++|||||++||.|||++||.+|+++|||||| T Consensus 2 ~Y~T~~Dl~~r~ge~~l~~Ltd~~~~~~~~~~~~~~d~~~i~~Al~dA~~~IDgyL~~RY~lPl~~vP~~L~~~a~dIA~ 81 (150) T protein:vir:79 2 RYCTLADLKLAVPERTLIELTNDTTTDYGAPAPTTINTDIVESAVRQAEEIVDAHLRGRYNLPLSPVPTVIKDVTVNLAR 81 (150) T ss_pred CcCCHHHHHHhcCHHHHHHHhcccccccccccccccCHHHHHHHHHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHH Confidence 599999999999972 157999999999999999999999999999999999999999999999 Q ss_pred HhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCC---CCccceeeecCCCcccCCCC-CCC Q lcl|NC_020479. 64 FFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDV---KLPAGFGTTTDGEQIFTLDR-PEW 130 (130) Q Consensus 64 Y~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~---~~~~g~~~~~~~~rvF~R~~-~~w 130 (130) |+||.++... ....+.+++||++|| |||++|++||++||++. .++++.+.+.+++|+|+|++ +.| T Consensus 82 Y~L~~~~~~~-~~~~e~v~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~v~~~~r~f~r~~l~g~ 150 (150) T protein:vir:79 82 HWLYARRPEG-AALPDTVSQTFKASM-HMLEKIRDNKLTIGDPSGPATPEPGEMKVRARRRQFDADLLERF 150 (150) T ss_pred HHHHhcccCC-CCCCHHHHHHHHHHH-HHHHHHhcCccccCCCCccCCCCCCceeeecCCCccChhhccCC Confidence 9999887632 233478999999999 79999999999999753 33445567788999999999 678 No 3 >protein:vir:107864 Length: 150 # NCBI annotation: gp36 # Family: family:all:348 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024709;genbank:gi:48696946;genbank:GeneID:2845952 Probab=100.00 E-value=4e-42 Score=247.57 Aligned_cols=128 Identities=20% Similarity=0.330 Sum_probs=111.6 Q ss_pred CCCCHHHHHHHhccCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLS-----------------KQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLAR 63 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~-----------------~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIAr 63 (130) =|||.+||+.+|||.+ +++|+++|++||+||+++|||||++||.|||++||.+|+++|||||| T Consensus 2 ~Y~T~~Dl~~r~ge~el~~Ltd~~~~g~~~~~~~~~d~~~i~~Al~dA~~eIDgYL~~RY~lPl~~vP~~L~~~a~dIAr 81 (150) T protein:vir:10 2 RYCTLADLKLAVPERTLIELTNDTTTDYGAPAPTTINTDIVESSVRQAEEIVDAHLRGRYNLPLSPVPTVIKDVTVNLAR 81 (150) T ss_pred CcCCHHHHHHhcCHHHHHHHhcccccCccccchhhcCHHHHHHHHHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHH Confidence 5999999999999721 37899999999999999999999999999999999999999999999 Q ss_pred HhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCC---CCccceeeecCCCcccCCCC-CCC Q lcl|NC_020479. 64 FFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDV---KLPAGFGTTTDGEQIFTLDR-PEW 130 (130) Q Consensus 64 Y~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~---~~~~g~~~~~~~~rvF~R~~-~~w 130 (130) |+||.+++. .....++++++|++|| |||++|++||++||++. .++++.+.+.+++|+|+|++ +.| T Consensus 82 Y~L~~~~~~-~~~~~e~v~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~v~~~~r~f~r~~l~gf 150 (150) T protein:vir:10 82 HWLYARRPE-GAALPDTVSQTFKASM-HMLEKIRDNKLTIGDPSGPATPEPGEMKVRARRRQFDADLLERF 150 (150) T ss_pred HHHHhcccc-cCCCCHHHHHHHHHHH-HHHHHHhcCcccCCCCCCCCCCCCceeeeecCCCccChhhccCC Confidence 999988763 2333578999999999 79999999999999753 23445566788999999999 668 No 4 >protein:vir:1993 Length: 141 # NCBI annotation: Hypothetical protein # Family: family:all:348 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050640;genbank:gi:9633527;genbank:GeneID:2636296 Probab=100.00 E-value=1.2e-41 Score=244.88 Aligned_cols=123 Identities=17% Similarity=0.310 Sum_probs=109.9 Q ss_pred CCCCHHHHHHHhccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcC Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-----------SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAED 69 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-----------~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~ 69 (130) =|||.+||+.+|||. ++.+|+++|++||+||++||||||++||.|||+++|.+|+++|||||||+||.+ T Consensus 2 ~Y~T~~Dl~~~~ge~~l~~Lt~d~~~~g~~d~~~i~~Al~dA~~eIdgyL~~RY~lPl~~~P~~L~~~a~dIA~Y~L~~~ 81 (141) T protein:vir:19 2 NYATVNDLCARYTRTRLDILTRPKTADGQPDDAVAEQALADASAFIDGYLAARFVLPLTVVPSLLKRQCCVVAWFYLNES 81 (141) T ss_pred CcCCHHHHHHhcCHHHHHHHhcCCCCccccCHHHHHHHHHHHHHHHHHHHhhcccCCccccchHHHHHHHHHHHHHHhcC Confidence 699999999999962 368999999999999999999999999999999999999999999999999988 Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCC-----ccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 70 AYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKL-----PAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 70 ~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~-----~~g~~~~~~~~rvF~R~~~~w 130 (130) +++ +++++|||+|| +||++|++||++||++..+ +++...+++++|+|+|+.+.| T Consensus 82 ~~~------e~i~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~~~~~~~~r~f~r~~~G~ 140 (141) T protein:vir:19 82 QPT------EQITATYRDTV-RWLEQVRDGKTDPGVESRTAASPEGEDLVQVQSDPPVFSRKQKGF 140 (141) T ss_pred CCC------hHHHHHHHHHH-HHHHHHhcCccccCCCCCCCCCCCCCceeEeecCCcccCcccccC Confidence 764 46899999999 7999999999999975422 234456778899999999999 No 5 >protein:vir:99222 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950460;genbank:gi:119953661;genbank:GeneID:4643082 Probab=100.00 E-value=1.1e-40 Score=239.71 Aligned_cols=121 Identities=21% Similarity=0.241 Sum_probs=106.2 Q ss_pred CCCCHHHHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhc Q lcl|NC_020479. 1 MYATPDDLRLVMNNL------------SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAE 68 (130) Q Consensus 1 MYaT~~Dl~~~~ge~------------~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~ 68 (130) =|||.+||+.+|||. ++++|+++|++||+||+++|||||++||.|||++||++|+++|||||||+||. T Consensus 2 ~YaT~~dl~~r~ge~~l~~Ltd~~~~~~~~~d~~~i~~Al~dA~aeIdgYL~~RY~lPl~~vP~~L~~~a~dIA~Y~L~~ 81 (138) T protein:vir:99 2 SYCTLADLIEQYSEQKIREVSDRVNKPATTIDTVIVDRAIADADSEIDLHLHGRYQLPLASVPTALKRIACGLAYANLHI 81 (138) T ss_pred CCCCHHHHHHhcCHHHHHHHhccCccccCcccHHHHHHHHHHHHHHHHHHHhhcccCCccccchHHHHHHHHHHHHHHhc Confidence 699999999999972 26899999999999999999999999999999999999999999999999998 Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCC----ccceeeecCCCcccCCCC Q lcl|NC_020479. 69 DAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKL----PAGFGTTTDGEQIFTLDR 127 (130) Q Consensus 69 ~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~----~~g~~~~~~~~rvF~R~~ 127 (130) ++.++ +.+++||++|| |||++|++||++||+++.+ +++.+.+++++|+|+||= T Consensus 82 ~~~~~-----e~i~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~~~~~~~r~F~Rd~ 138 (138) T protein:vir:99 82 VLKEE-----NPVYKTAEHLR-KLLSGIANGKLSLALDADGKPAPVANTVQISEGRNDWGADW 138 (138) T ss_pred CCCCc-----HHHHHHHHHHH-HHHHHHhcCcccCCCCCCCcCCCCCCceeeecCCCCCCCCC Confidence 76542 45899999999 7999999999999976432 233455677889999985 No 6 >protein:vir:79253 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469165;genbank:gi:157835007;genbank:GeneID:5648834 Probab=100.00 E-value=1.1e-40 Score=239.71 Aligned_cols=121 Identities=21% Similarity=0.241 Sum_probs=106.2 Q ss_pred CCCCHHHHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhc Q lcl|NC_020479. 1 MYATPDDLRLVMNNL------------SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAE 68 (130) Q Consensus 1 MYaT~~Dl~~~~ge~------------~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~ 68 (130) =|||.+||+.+|||. ++++|+++|++||+||+++|||||++||.|||++||++|+++|||||||+||. T Consensus 2 ~YaT~~dl~~r~ge~~l~~Ltd~~~~~~~~~d~~~i~~Al~dA~aeIdgYL~~RY~lPl~~vP~~L~~~a~dIA~Y~L~~ 81 (138) T protein:vir:79 2 SYCTLADLIEQYSEQKIREVSDRVNKPATTIDTVIVDRAIADADSEIDLHLHGRYQLPLASVPTALKRIACGLAYANLHI 81 (138) T ss_pred CCCCHHHHHHhcCHHHHHHHhccCccccCcccHHHHHHHHHHHHHHHHHHHhhcccCCccccchHHHHHHHHHHHHHHhc Confidence 699999999999972 26899999999999999999999999999999999999999999999999998 Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCC----ccceeeecCCCcccCCCC Q lcl|NC_020479. 69 DAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKL----PAGFGTTTDGEQIFTLDR 127 (130) Q Consensus 69 ~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~----~~g~~~~~~~~rvF~R~~ 127 (130) ++.++ +.+++||++|| |||++|++||++||+++.+ +++.+.+++++|+|+||= T Consensus 82 ~~~~~-----e~i~~rY~~Ai-~~L~~Ia~Gk~~Lg~~~~~~~~~~~~~~~~~~~~r~F~Rd~ 138 (138) T protein:vir:79 82 VLKEE-----NPVYKTAEHLR-KLLSGIANGKLSLALDADGKPAPVANTVQISEGRNDWGADW 138 (138) T ss_pred CCCCc-----HHHHHHHHHHH-HHHHHHhcCcccCCCCCCCcCCCCCCceeeecCCCCCCCCC Confidence 76542 45899999999 7999999999999976432 233455677889999985 No 7 >protein:vir:103846 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:348 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938245;genbank:gi:38229150;genbank:GeneID:2648161 Probab=100.00 E-value=2.7e-40 Score=237.47 Aligned_cols=121 Identities=20% Similarity=0.239 Sum_probs=105.8 Q ss_pred CCCCHHHHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhc Q lcl|NC_020479. 1 MYATPDDLRLVMNNL------------SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAE 68 (130) Q Consensus 1 MYaT~~Dl~~~~ge~------------~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~ 68 (130) =|||.+||+.+|||. .+++|+++|++||++|++||||||++||.|||++||.+|+++|||||||+||. T Consensus 2 ~Y~T~~dl~~r~ge~~l~~Ltd~~~~~~~~~d~~~i~~Al~dA~~eIdgyL~~RY~lPl~~vP~~L~~~a~dIA~Y~L~~ 81 (138) T protein:vir:10 2 SYCTQADLVEQYGEASIRQLSDRVNKPATTIDPAVVAQAIADADAEIDLHLHARYQLPLAQVPVVLKRVACVLAFANLHT 81 (138) T ss_pred CcCCHHHHHHhcCHHHHHHHhcccCCCcCccCHHHHHHHHHHHHHHHHHHHhhcccCCccccchHHHHHHHHHHHHHHhc Confidence 599999999999973 26899999999999999999999999999999999999999999999999997 Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCC----CccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 69 DAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVK----LPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 69 ~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~----~~~g~~~~~~~~rvF~R~~~~w 130 (130) ++.. .+.+++||++|| +||++|++||++||+++. ++++.+.+++++|+|+|+ | T Consensus 82 ~~~~-----~e~~~~rY~~Ai-~~L~~Ia~G~~~Lg~~~~~~~~~~~~~~~~~s~~r~Fg~d---~ 138 (138) T protein:vir:10 82 QVKD-----DHPAILDAERKR-KLLGGISSGKLSLALTSSGTPAPIANTVQISSQRNDFGGT---W 138 (138) T ss_pred CCCC-----ChHHHHHHHHHH-HHHHHHhcCcccCCCCCCcccCCCCCceeeecCCccCCCC---C Confidence 7642 256899999999 799999999999997543 223445667789999986 5 No 8 >protein:vir:2505 Length: 128 # NCBI annotation: hypothetical protein # Family: family:all:28222 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569746;genbank:gi:18496896;genbank:GeneID:932265 Probab=95.64 E-value=2.4e-05 Score=45.89 Aligned_cols=107 Identities=14% Similarity=0.152 Sum_probs=61.2 Q ss_pred CCCCHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNN-LSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge-~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) -.||.+|+.++.+. ++.. ....+..=|++|+..|+||| ++|.+| .++|..++++||.|+.=-|.. +.+..++. T Consensus 6 alAtvdDv~~~lrr~Lt~d-E~~~a~~Ll~eAsdlI~g~l-~~~~vp-~~~p~~v~rVvA~ivarAltr--~~~~~pe~- 79 (128) T protein:vir:25 6 ALATSQDVKRALRRDLTEA-EQTDLSELLAEATDLVVGYL-HPYPVP-TPTPGPIKRVVASMVAAVLTR--PTQILPET- 79 (128) T ss_pred hccCHHHHHHHhcCCCCHH-HHHHHHHHHhcchheeeeec-CCCCCC-CCCCchHHHHHHHHHHHHhhC--CCccCCCc- Confidence 68999999999965 4332 45567778999999999999 788887 577889999999998777743 33322211 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) +.+-+|-.+-+....+++|..--+..++. .-+-| T Consensus 80 --------------~S~TAgpfs~~ft~~~~~~g~yLTaa~k~---~Lrp~ 113 (128) T protein:vir:25 80 --------------QSLTADGFGVTFTPGGNSPGPYLSAALKQ---RLRPY 113 (128) T ss_pred --------------eeeecccccccccCCCCCCCceEcHHHHh---hcccc Confidence 11223322222222222211111110000 01112 No 9 >protein:vir:98481 Length: 136 # NCBI annotation: ORF3 # Family: family:all:32440 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958281;genbank:gi:41057255;uniprot:Q38596;genbank:GeneID:2732865 Probab=94.70 E-value=0.0018 Score=35.59 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=61.7 Q ss_pred CCCCHHHHHHHhccC-CC-CCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccch Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-SK-QVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNL 78 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-~~-~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~ 78 (130) =|||.+|++.+++-. +. +-..+.++.-|+|||..|-.+. .-+-++-|..+++++|++++=.+ .+ +... + T Consensus 3 ~fAtv~Dl~~rw~~~~~dee~~ra~~~~lL~dAS~~ir~~~----p~~~~~~~~~~~~V~~~~V~R~~-~n-p~G~---~ 73 (136) T protein:vir:98 3 AYATVEDYQARAAVTLPDGSPRRAQVEAYLDDASALMARHI----PTGHTPDPGTLRAICVAVVRRVM-AN-PGGY---R 73 (136) T ss_pred ccCCHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHhC----CCCCCCChhHHHHHHHHHHHHHh-hC-CCCc---c Confidence 699999999999853 32 2223567888999999987664 34445568999999999987444 22 2111 1 Q ss_pred hhHHHHHHHHHHHHHHHHhCCeee--------cCCCCC-----CccceeeecCCCcccCCCCC---CC Q lcl|NC_020479. 79 DEYYIKMKERIDKLINDILSGVLI--------IDPDVK-----LPAGFGTTTDGEQIFTLDRP---EW 130 (130) Q Consensus 79 ~~~~~~y~~ai~k~L~~Ia~G~~~--------Lg~~~~-----~~~g~~~~~~~~rvF~R~~~---~w 130 (130) .+-.-.|-..+. + .|.+- ||+... ..+-+...+++. .--|++| .| T Consensus 74 s~TaG~ys~s~t-~-----~G~Lylt~~E~~~Lg~~rqr~~~~d~a~si~~~~~~-~~~~~dp~~~~~ 134 (136) T protein:vir:98 74 QRTIGQYAETLG-E-----DGGLYLTEDEKGQLQPPDQTAPDADAAYSLDLDPGT-RAWVDDPAGCGW 134 (136) T ss_pred cccchhHHHhhh-c-----CCCcccChHHHHHhCCCCCcccccccceecccCCCc-CCcCCCCCCCCC Confidence 223445655442 2 45533 343221 011111111111 1112222 45 No 10 >protein:vir:9576 Length: 131 # NCBI annotation: gp42 # Family: family:all:1271 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862881;genbank:gi:32469473;genbank:GeneID:1461318 Probab=94.49 E-value=0.00022 Score=40.61 Aligned_cols=113 Identities=11% Similarity=0.100 Sum_probs=59.9 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhh------ccCCCCCcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVA------YKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~R------Y~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|+..++++++.. ....++.-|++||..|..-+-.. +..+-+..+..++++||++++.-|-...-.+. T Consensus 3 ~fAtv~D~~~rwr~Lt~~-E~~ra~~LL~~As~~ir~~~p~~~~~l~~~~~~~~~~~~~~~~V~~~~V~Ral~~~~~~~G 81 (131) T protein:vir:95 3 NFATVEDLKKLWRALKFD-EEKRAEALLEVVSHSLRVEAKKVGKDLDGLVATDPSFTMVVKSVTVDVVARTLMTSTDQEP 81 (131) T ss_pred ccCCHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHHhhhhccCCccccccCCccchHHHHHHHHHHHHHHhcCCCCCCC Confidence 699999999999654333 24589999999999997655322 22333455788999999999998853211111 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeec-CCCcccCCCCCCC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTT-DGEQIFTLDRPEW 130 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~-~~~rvF~R~~~~w 130 (130) ..+.-+-.-.|-+.. +|+ .++|....+ .-.+..+-...+| T Consensus 82 ~tq~S~TaG~ys~S~-t~~---------------~p~g~lylt~~e~~~LGl~~~r~ 122 (131) T protein:vir:95 82 MTQVAESALGYSFSG-SYL---------------VPGGGLFIKDSELKRLGLKKQRY 122 (131) T ss_pred ceeeeeecccceeee-eee---------------cCCCCceeChHHHHHhCCCCCce Confidence 000001111221111 111 112111111 1123334444444 No 11 >protein:vir:94761 Length: 132 # NCBI annotation: unknown # Family: family:all:1271 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996708;genbank:gi:45597423;genbank:GeneID:2769029 Probab=94.48 E-value=0.00027 Score=40.19 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=58.9 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCC---C----cchHHHHHHHHHHHHhhhcCCccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFL---V----TPPIIHDIAVDLARFFFAEDAYTS 73 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~---~----vP~~L~~~a~dIArY~L~~~~~~~ 73 (130) =|||++|++.++++++.. -.+.++.-|++||..|..=.-.++.-|.. + .+.+++++||++++=-|....-.+ T Consensus 3 ~fAtv~Dl~~r~r~L~~d-E~~ra~~LL~dAs~~iR~~~~~~~~~~~~~~~~~~d~~~~~~k~V~~~~V~Ral~~~~~~~ 81 (132) T protein:vir:94 3 PFATVDDLTMLWRPLKGD-EKERAEKLLEIVSDTLREEADKVGRDLDVMISEKPSYFSSVVKSVTVDIVARTLMTSTDQE 81 (132) T ss_pred CcCCHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHHHHhhhccccccccCCCCccchhHHHHHHHHHHHHHhcCCCCCC Confidence 799999999999754332 14789999999999997665555543322 1 256799999999987774321111 Q ss_pred cccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeec-CCCcccCCCCCCC Q lcl|NC_020479. 74 QKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTT-DGEQIFTLDRPEW 130 (130) Q Consensus 74 ~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~-~~~rvF~R~~~~w 130 (130) ...+.-+-.-.|-+.. +| ..++|....+ .-.+..+-...+| T Consensus 82 g~tq~S~TaG~ys~S~-T~---------------~np~G~lylt~~e~~~LGl~~~r~ 123 (132) T protein:vir:94 82 PMTQTTESALGYSVSG-SY---------------LVPGGGLFIKNSELSRLGLKKQRF 123 (132) T ss_pred Cceeeeeecccceeee-ee---------------ecCCCCceeChHHHHhhCCCCCce Confidence 1000001111111111 01 1112211111 1123334344444 No 12 >protein:vir:9761 Length: 140 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795523;genbank:gi:28876281;genbank:GeneID:1257822 Probab=93.88 E-value=0.00057 Score=38.37 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=65.0 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-hhccCCCC-----CcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLG-VAYKTPFL-----VTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~-~RY~lPL~-----~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|++.+++.++.. -.+.++.-|++||..|...+- .-+.+|-. ..+.+++.+||++.+=-|-...-.+. T Consensus 3 ~fATv~Dv~~rwr~Lt~d-E~~ra~~LL~dAS~~iR~~~p~~g~~~~~~~~~~~~~~~~~k~V~~~mV~Ral~~~~d~~G 81 (140) T protein:vir:97 3 NFATTDDVILLWRPLSVD-ELKRANALLKVVSDTLRMEADKVGKDLDKTMVDKPYFVNVIKSVTVDIVARTLMTSTQGEP 81 (140) T ss_pred cCCCHHHHHHHhcCCCHh-HHHHHHHHHHHHHHHHHHhhhhccCCcchhcccCccchhHHHHHHHHHHHHHhcCCCCCCc Confidence 699999999999765433 246899999999999987774 33555522 23567899999998765632211111 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeec--------CCCCCCccce----eeecCCCcccCC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLII--------DPDVKLPAGF----GTTTDGEQIFTL 125 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~L--------g~~~~~~~g~----~~~~~~~rvF~R 125 (130) ..+.-+-.-.|-+.. +|+ ...|.+-| |+.. +--|+ +-..-++--|+| T Consensus 82 ~tq~S~TaG~ys~S~-T~~--np~G~lylt~~e~~~LGl~~-~r~~~i~~~g~~~~~~~~~~~ 140 (140) T protein:vir:97 82 MSQESQSALGYTWSG-TYL--VPGGGLFIKDNELKRLGLKK-QRYGGIELYGEIKRDNDYFDR 140 (140) T ss_pred ceeeeeeccchhhee-eee--cCCCCceeChHHHHHhCCCC-CceeeecccCccccCcccccC Confidence 111112233443333 233 22343332 2211 00111 111234456777 No 13 >protein:vir:1640 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695061;genbank:gi:23455752;genbank:GeneID:955488 Probab=92.85 E-value=0.00096 Score=37.12 Aligned_cols=114 Identities=14% Similarity=0.158 Sum_probs=58.1 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-C---CC--C-CcchHHHHHHHHHHHHhhhcCCccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK-T---PF--L-VTPPIIHDIAVDLARFFFAEDAYTS 73 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-l---PL--~-~vP~~L~~~a~dIArY~L~~~~~~~ 73 (130) =|||.+|+..+++.++.. ....++.-|++|+..|-.=+-.+.. + +- + ..+..++++||++++=-|-...-.+ T Consensus 3 ~fAtv~Dv~~r~r~L~~~-E~~ra~~lL~dAs~~ir~~~p~~~~~l~a~~~e~~~~~~~~~~~V~~~~V~Ral~~~~~~~ 81 (132) T protein:vir:16 3 PFATVDDLTMLWRPLKGD-EKERAEKLLEIVSDSLREEADKVGRDLYAMIAEKPSYFASVVKSVTVDIVARTLMTSTDQE 81 (132) T ss_pred ccCCHHHHHHHhcCCCHh-HHHHHHHHHHHHHHHHHHhhhhhccccccccccccccchhHHHHHHHHHHHHHhcCCCCCC Confidence 699999999999754332 2468999999999999665533332 2 11 1 2356799999999877664321111 Q ss_pred cccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 74 QKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 74 ~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) ...+.-+-.-.|-+.. +|+ ...|.+-|. ..-.+..+-...+| T Consensus 82 G~tq~S~TaG~ys~S~-t~~--~p~G~lylt------------~~e~~~LG~~~~r~ 123 (132) T protein:vir:16 82 PMTQTTESALGYSVSG-SYL--VPGGGLFIK------------NSELSRLGLKKQRF 123 (132) T ss_pred Cceeeeeeccchheee-eee--cCCCcceeC------------hHHHHhhCCCCCce Confidence 1111111222332222 222 122222221 11112222233333 No 14 >protein:vir:2432 Length: 124 # NCBI annotation: gp19 # Family: family:all:2817 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046834;genbank:gi:9630402;genbank:GeneID:1261576 Probab=90.38 E-value=0.012 Score=31.10 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=65.6 Q ss_pred CCCCHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-----CCCcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMN-NLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-----FLVTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~g-e~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-----L~~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|+.++++ +++. -....++.-|+||+..|= .|++-. -+..|..++.++|++..=-+.. + +. T Consensus 2 ~~At~~Dv~~rw~r~Lt~-~E~~~ve~lL~dAs~~ir----~r~P~l~~~~~~~~~~~~v~~V~a~~V~R~~rn--P-~G 73 (124) T protein:vir:24 2 AYATADDVVTLWAKEPEP-EVMALIERRLEQVERMIR----RRIPDLDARVSSDIFRADLIDIEADAVLRLVRN--P-EG 73 (124) T ss_pred CCCCHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHH----hcCCCcchhcCCCCChhhHHHHHHHHHHHHhhC--C-CC Confidence 6999999999995 4443 245679999999999886 466522 2245778999999987654422 1 11 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCC------CCCCccceeeecCCCcccC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDP------DVKLPAGFGTTTDGEQIFT 124 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~------~~~~~~g~~~~~~~~rvF~ 124 (130) - +.+-...|-..+. + +...|++-|.. .+...++.....|+--+=+ T Consensus 74 ~--~s~T~G~Ys~sl~-~--~~~~g~Lylt~~E~~~Lg~~r~~~~~~i~p~~~~~~ 124 (124) T protein:vir:24 74 Y--LSETDGAYTYQLQ-A--DLSQGKLVILDEEWTTLGVNRLSRMSTLVPNIVMPT 124 (124) T ss_pred c--eecccchhHHhhh-h--cccCCceeeCHHHHHhhCcccccceeEeecceeeCC Confidence 1 1122356666552 2 46668777632 1222334444444433323 No 15 >protein:vir:80389 Length: 172 # NCBI annotation: BcepGomrgp09 # Family: family:all:703 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210229;genbank:gi:146329921;genbank:GeneID:5123498 Probab=89.60 E-value=0.0059 Score=32.79 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=60.3 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH----Hhhhc------------------cCCCCCcchHHHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDAR----LGVAY------------------KTPFLVTPPIIHDIA 58 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~Y----L~~RY------------------~lPL~~vP~~L~~~a 58 (130) =|+|.++...-+..+-..++++..+.||..|+..||+| ++.|= .+|-..+|..|+..| T Consensus 16 SYvt~~~a~aY~~~rg~~~~~d~~e~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~g~~~~~~~IP~~v~~A~ 95 (172) T protein:vir:80 16 TYAGADFVIAYAQARGVTVDADEAERLILEAMDYIESFRRRWKGERNTREQGLTWPRHDAVVDGFVIPSDVIPKELQSAV 95 (172) T ss_pred ccccHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHHhhccCccccccCCccccccccccCcccCcccccccchhHHHHHHH Confidence 89999999887777766777778899999999999993 32221 256678999999999 Q ss_pred HHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCcccee-eec------------------CC Q lcl|NC_020479. 59 VDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFG-TTT------------------DG 119 (130) Q Consensus 59 ~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~-~~~------------------~~ 119 (130) |.+|.+-+-..... . ..+ ..++ | .++| |-++.--.....++.. +.+ ++ T Consensus 96 ~elA~~~~~g~~~~-~--~~~------~~~v-~-~ekV--G~i~~eY~~~~~~~~~~~~~~~~~~~~~v~~LL~p~l~~~ 162 (172) T protein:vir:80 96 AAAVIEQVNGFELQ-Q--SQD------QWAV-R-IEKV--DVIEVQYAAGGGGQSASANAPMKPTFPKIDALLNPLLVGD 162 (172) T ss_pred HHHHHHHhcCCccC-c--CCC------Ccee-e-EEec--cceEEeeecccCccccccccCCccchHHHHHHHhhhhcCC Confidence 99997555321111 1 111 0112 1 2223 3322210000000000 000 00 Q ss_pred CcccCCCCCC Q lcl|NC_020479. 120 EQIFTLDRPE 129 (130) Q Consensus 120 ~rvF~R~~~~ 129 (130) .-+|-+-=+. T Consensus 163 gg~~~~~vrg 172 (172) T protein:vir:80 163 GGLFLVAVRG 172 (172) T ss_pred CCeeeeeecC Confidence 0111110000 No 16 >protein:vir:80967 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468394;genbank:gi:157324968;genbank:GeneID:5601402 Probab=86.26 E-value=0.043 Score=28.09 Aligned_cols=111 Identities=12% Similarity=0.099 Sum_probs=61.9 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-C----CCcchHHHHHHHHHHHHhhhcCCccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-F----LVTPPIIHDIAVDLARFFFAEDAYTSQK 75 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L----~~vP~~L~~~a~dIArY~L~~~~~~~~~ 75 (130) =|+|.+..+..|+. ..+.++..++.+..|+..||.+.-.|+.-- + +.+|..++..||..|-|.--.+...+ T Consensus 2 ~Y~d~~~Y~~~y~G--~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~d~~~~~~~~~vk~A~c~q~e~~~~~g~~~~-- 77 (131) T protein:vir:80 2 PYTTLEFYTNEYAG--EHLEQDEFAKLLKHAERKIDSVTFYRIRKSGIEAFSEFIQHQIQLATCNQIEYFKEAGGTSE-- 77 (131) T ss_pred CCCCHHHHHHhhCC--CCCchhHHHHHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHhhhhhh-- Confidence 69999999999854 456778899999999999999999998521 1 45678899999999987543211100 Q ss_pred cchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 76 PNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 76 ~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) .+. .-...+.-|+.++.-...+.++ ....+.++ .-+-..| T Consensus 78 -----------~~~-~~~~S~svG~~Svs~~~~~~~~--~~~~~~~~-~~~a~~~ 117 (131) T protein:vir:80 78 -----------LAV-SKPDNVSIGRTSISDSNFASTA--TSLNSGLV-GSDVRSY 117 (131) T ss_pred -----------hcc-cccCeeeeCceEEeeccccchh--hhhhhhhh-HHHHHHH Confidence 000 0122234444443221111110 00111111 1111111 No 17 >protein:vir:43 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463469;swissprot:trembl:q9t1b5;genbank:gi:16798791;uniprot:Q9T1B5;genbank:GeneID:922374 Probab=85.42 E-value=0.049 Score=27.78 Aligned_cols=110 Identities=11% Similarity=0.068 Sum_probs=62.4 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc------CCCCCcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK------TPFLVTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~------lPL~~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|+|.+..+..||. ..++++..++.+..|+..||.+.-.||. +| +.+|..++..||..|-|.--.+... T Consensus 2 ~Y~d~~~Y~~~y~g--~~i~e~~F~~l~~rAs~~ID~~T~~ri~~~~~~~~~-~~~~~~vk~A~c~q~e~~~~~g~~s-- 76 (131) T protein:vir:43 2 PYTTLEFYNDEYAG--EHLEQDEFDKLLKHAERKIDSVTFYRIRKGGIESFS-EFIQHQIQLATCNQIEYFKEAGGTS-- 76 (131) T ss_pred CCCCHHHHHHhhCC--CCCCHhHHHHHHHHHHHHHHHHhcccccccCccccc-hhhHHHHHHHHHHHHHHHHHhHHHh-- Confidence 69999999999854 4577788999999999999999999985 22 4578889999999998754221100 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) ..+. .-...+.-|+.++.-...+.++. +.....-.-+-..| T Consensus 77 -----------~~~~-~~~~S~svG~~Svs~~~~~~~~~---~~~~~~~~~~a~~~ 117 (131) T protein:vir:43 77 -----------ELAV-SKPDNVSIGRTSISDSNFASTAT---SLNSGLIGSDVRSY 117 (131) T ss_pred -----------hhhc-cccCeeecCceEEeecccccchh---hhchhhhHHHHHHH Confidence 0000 01222444444442211111100 00001111111122 No 18 >protein:vir:94507 Length: 113 # NCBI annotation: putative DNA packaging protein # Family: family:all:372 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223891;genbank:gi:62327103;genbank:GeneID:5075523 Probab=83.98 E-value=0.058 Score=27.36 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=68.4 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|-. ....++.++..|.+|+..|=.|| ++|.+-...+|..|..+.+++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgi~-d~~~D~lL~~iI~~a~~~i~~~l-~~~~~~~~~iP~~l~~Iv~evavkryNR-~g~EG~~S~See 77 (113) T protein:vir:94 1 MALLDSIKLRIGIE-DTKQDDLLTDIISDVQARVLAYV-NQDGLVQSELPNGLDFVIKDVTIRIYNK-IGDEGKESSSEG 77 (113) T ss_pred CchHHHHHHHhCCC-CCchhhHHHHHHHHHHHHHHHHh-CCccchhhhhhhHHHHHHHHHHHHHhcc-cCCccceeeecC Confidence 47788888888864 33335789999999999999999 4677667789999999999999887633 22222111 Q ss_pred -------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 -------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 -------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) ....-+.|.+-|.+|++.-.++ .++.|+| T Consensus 78 G~S~sf~~~~df~~y~~~l~~~~~~~~~~-----------------~~g~rF~ 113 (113) T protein:vir:94 78 NVSNTWDTPADLSEYSDVLDVYRKSYKRR-----------------SAGMRFI 113 (113) T ss_pred ceeeeecCccchhhHHHHHHHHHhhccCC-----------------CCCceeC Confidence 1122467777777777631111 1233555 No 19 >protein:vir:4831 Length: 105 # NCBI annotation: ORF27 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038328;genbank:gi:9634654;genbank:GeneID:1262588 Probab=83.60 E-value=0.057 Score=27.42 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=54.8 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) |..|.+++..--.= ...-|++.|+.-|.-|.+.|.++++.....+ -..+|+..+..++-++-+ +|.+|-........ T Consensus 1 M~vtLee~K~~LRI-D~dddD~lI~~~i~aA~~yi~~~ig~~~~~~~~~~~~~~~~~Avl~lv~~-~YeNR~~~~~~~~~ 78 (105) T protein:vir:48 1 MSVSKTSIMQTLNL-DETDDTALIPAYIESAKQYIINAVGSDSKFYDLENVQPLFDTAVIALTSS-YFTYRVALTDTVTY 78 (105) T ss_pred CcccHHHHHHHcCC-CCccchHHHHHHHHHHHHHHHHhhCCCCccccccCCchHHHHHHHHHHHH-HHhhhhhccCcccc Confidence 99999999864331 2445789999999999999999997544311 124556555555544444 45555322221222 Q ss_pred hHHHHH-------HHHHHHHHHHHhCC Q lcl|NC_020479. 80 EYYIKM-------KERIDKLINDILSG 99 (130) Q Consensus 80 ~~~~~y-------~~ai~k~L~~Ia~G 99 (130) ++-... +....+|-+-.-+| T Consensus 79 ~ip~~v~sli~~lR~~y~~~~e~~~~g 105 (105) T protein:vir:48 79 PINLTLNSIIGQLRGLYATYSEVVANG 105 (105) T ss_pred hhhHHHHHHHHHHhhhhhhhhhcccCC Confidence 222222 22222344444444 No 20 >protein:vir:7773 Length: 123 # NCBI annotation: gp19 # Family: family:all:2817 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817607;genbank:gi:29566037;genbank:GeneID:1259231 Probab=82.36 E-value=0.047 Score=27.87 Aligned_cols=111 Identities=15% Similarity=0.142 Sum_probs=61.7 Q ss_pred CCCCHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CC-CCCcc---hHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMN-NLSKQVTDELLTKYIKEASNYIDARLGVAYK-TP-FLVTP---PIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~g-e~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lP-L~~vP---~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|+.++++ +++. -....++.-|+||+..|=. |++ |+ ..+-| ..+++++|++..=-+ .+ ++. T Consensus 2 ~~At~~Dv~ar~~r~LT~-~E~~~ve~lL~dAs~~ir~----r~P~l~~~a~d~~~~~~~~~V~~~~V~R~~-rn--peG 73 (123) T protein:vir:77 2 PYATASDVTSRWARQPTD-EETALINVRLADVERMIKR----RIPDLATKVTDPDYLEDLKQVEADAVLRLV-RN--PEG 73 (123) T ss_pred CcCCHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHHH----hccCcccccCCcchhHHHHHHHHHHHHHHh-hC--CCC Confidence 6999999999985 4444 2456799999999999865 443 22 11234 678899998765433 21 121 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCCC-----CCCccceeeecCCCcccC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDPD-----VKLPAGFGTTTDGEQIFT 124 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~-----~~~~~g~~~~~~~~rvF~ 124 (130) - ..+-.-.|-+.+ . .....|++-|..+ ..+-++..+.+|....=+ T Consensus 74 ~--~s~T~G~ys~sl-~--~a~~~g~Lylt~~E~~~Lg~~~~~~~~i~p~~~~~~ 123 (123) T protein:vir:77 74 Y--LSETDGNYTYML-R--SDLASGKLEIFPEEWEILGYRRSRMTVIVPNPVMPT 123 (123) T ss_pred c--eecccchhhhhh-c--ccCCCCcceeCHHHHHhhcCCCCceeEEeeceecCC Confidence 1 112224666554 2 3466777765321 112233333333332222 No 21 >protein:vir:486 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543093;swissprot:trembl:q8w626;genbank:gi:18249905;uniprot:Q8W626;genbank:GeneID:929692 Probab=82.28 E-value=0.057 Score=27.41 Aligned_cols=96 Identities=9% Similarity=-0.011 Sum_probs=53.8 Q ss_pred CCCCHHHHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhhhccCCCC----------CcchHHHHHHHHHHHHhhhcC Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSK-QVTDELLTKYIKEASNYIDARLGVAYKTPFL----------VTPPIIHDIAVDLARFFFAED 69 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~-~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~----------~vP~~L~~~a~dIArY~L~~~ 69 (130) |+.|.++++.--.=..+ .-|++.|+..|.-|++.|-+|++.+..-+-. .+|+.++. |+-+..=++|.+ T Consensus 1 M~vtL~e~K~hLRid~D~~ddD~li~~~i~aA~~~i~~~~~r~l~~~~~~~~~~~~~~~~~~~~ik~-Avlllv~~~Y~N 79 (107) T protein:vir:48 1 MLLKEEEIKSHLRLDDGLYSDGDFLKLLAQAVQKRTETYLNRKLYAPEETIPEDDPDGMHLTDDVRL-AMLMLVSHFYEN 79 (107) T ss_pred CCCCHHHHHHHcCCCCCCchhHHHHHHHHHHHHHHHHHHhccccccccccccccCccccccchhHHH-HHHHHHHHHHhh Confidence 99999999875442222 2457889999999999999999876532211 24555544 555555567776 Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHhCCeeec Q lcl|NC_020479. 70 AYTSQKPNLDEYYIKMKERIDKLINDILSGVLII 103 (130) Q Consensus 70 ~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~L 103 (130) |-.-......++-.-.+.-|. -++. .+| T Consensus 80 Re~v~~~~~~~iP~~v~~LL~-~yR~-----~~l 107 (107) T protein:vir:48 80 RSTITDVEKLETPMSFRWLAG-PYRI-----VPL 107 (107) T ss_pred hhhhccccccccCHHHHHHHH-Hhhc-----cCC Confidence 532211111222222222221 2222 222 No 22 >protein:vir:97145 Length: 110 # NCBI annotation: ORF049 # Family: family:all:372 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239728;genbank:gi:66394913;genbank:GeneID:5130878 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:97 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:97 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 23 >protein:vir:96221 Length: 110 # NCBI annotation: ORF044 # Family: family:all:372 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239573;genbank:gi:66395333;genbank:GeneID:5132767 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:96 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:96 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 24 >protein:vir:99796 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004309;genbank:gi:122891763;genbank:GeneID:4712351 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:99 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:99 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 25 >protein:vir:96390 Length: 110 # NCBI annotation: ORF048 # Family: family:all:372 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239650;genbank:gi:66395410;genbank:GeneID:5132866 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:96 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:96 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 26 >protein:vir:78849 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285363;genbank:gi:148717891;genbank:GeneID:5246980 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:78 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:78 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 27 >protein:vir:9311 Length: 110 # NCBI annotation: phi Mu50B-like protein # Family: family:all:372 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803289;genbank:gi:29028599;genbank:GeneID:1258047 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:93 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:93 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 28 >protein:vir:103957 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873994;genbank:gi:118430769;genbank:GeneID:4525451 Probab=81.53 E-value=0.085 Score=26.46 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=63.8 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|=. ....++.++..|++|+..|=.||+ +-...+|..|..+++++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~~ii~~a~~~i~~~l~----~~~~~iP~~l~~iv~ev~vkryNR-~g~EG~~S~S~e 74 (110) T protein:vir:10 1 MTTLADVKKRIGLK-DEKQDEQLEEIIKSCESQLLSMLP----IEVEQIPERFSYMIKEVAVKRYNR-IGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHHHHhc----cchhhhhhHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 47788888887643 344577899999999999999995 223468999999999998876632 22221111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. .|+. ..|. .|++ T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~--~~~~--------~kG~------v~Fl 110 (110) T protein:vir:10 75 GRSNAYELNDFKEYEAIIDNYFNA--RTRT--------KKGR------AVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhh--cCCC--------CCce------eeeC Confidence 123466788888788763 1111 1121 2333 No 29 >protein:vir:81159 Length: 95 # NCBI annotation: putative DNA packaging protein # Family: family:all:316 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285813;genbank:gi:148747734;genbank:GeneID:5247202 Probab=81.17 E-value=0.088 Score=26.37 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=57.6 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |+.|.+++..--. -...-|++.|+.-|+-|...|.+|++.++ ...|+.++..++-++-+ +|.+|-.... ...+ T Consensus 2 m~vtLee~K~~LR-ID~d~dD~lI~~li~aA~~~i~~~~g~~~----~~~~~~~~~Avl~lv~~-~YeNRe~~~~-~~~~ 74 (95) T protein:vir:81 2 MIVTLEEVKNWLR-VDFSDDDALITTLINAAEEYLKNATGTTF----DATNHLAKIFCMTLIAD-WYENRELVGR-ASDQ 74 (95) T ss_pred CcCCHHHHHHHcC-CCCCcchHHHHHHHHHHHHHHHHhhcccc----ccCchHHHHHHHHHHHH-HHhhcccccc-cccc Confidence 9999999975432 23445899999999999999999997654 35566666655555544 4555533221 1223 Q ss_pred HHHHHHHHHHHHHHHHhCCeee Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLI 102 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~ 102 (130) +..-.+.-|. -|+.--.|.-. T Consensus 75 ~p~~v~sll~-~lr~~~~~~~~ 95 (95) T protein:vir:81 75 VRPILQSILA-QLTYAYGGETA 95 (95) T ss_pred ccHHHHHHHH-HhhhccccccC Confidence 4444444443 24543333322 No 30 >protein:vir:106596 Length: 128 # NCBI annotation: ORF042 # Family: family:all:372 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239495;genbank:gi:66395254;genbank:GeneID:4555750 Probab=80.79 E-value=0.042 Score=28.12 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=63.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc--- Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN--- 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~--- 77 (130) |=.+.+++..+.|-. ....++.++..|++|...|=.||.... ..+|+.|..+..++|.-+.-. ...|.... T Consensus 18 ~m~~Le~vK~~LgI~-d~~~D~lL~~lI~~a~~~i~~~l~~~~----~~iP~~L~~Iv~evaVkryNR-~g~EG~~S~Se 91 (128) T protein:vir:10 18 VMNYLDDVKSRIGLN-DNEQDKQLNSIINNVAAELLSRLPVDT----ISIPDKLQFIVVEVSTKRYNR-IGAEGMSTDSQ 91 (128) T ss_pred HHHHHHHHHHHhCCC-CcchhhHHHHHHHHHHHHHHHHcCCCh----hhhhhhHHHHHHHHHHHHhcc-cCccCcceeee Confidence 555666777777653 344467899999999999999997332 358999999998888765522 22221110 Q ss_pred -------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 -------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 -------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+-|.+|++. .|+.. .+.-|+| T Consensus 92 eG~S~tf~dnd~~~Y~~~L~~y~~~--~~~~~--------------kG~v~F~ 128 (128) T protein:vir:10 92 DGRSNTFERNDFEEYQSIIDALYPK--LDSSE--------------RGSVNFY 128 (128) T ss_pred CceeeeeccCCcchhHHHHHHHHhh--ccCCC--------------CCceeeC Confidence 123456688888888874 12211 2344666 No 31 >protein:vir:2738 Length: 112 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695111;genbank:gi:23455880;genbank:GeneID:955641 Probab=80.61 E-value=0.093 Score=26.23 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=62.6 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc--- Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN--- 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~--- 77 (130) |=.+..-+......+.+..|+..++..|.+|+..|=.||. ...+|..|..+.+++|..+.-. ..+|.... T Consensus 1 ~~l~~~~~L~~iK~~lg~~dD~lL~~ii~~a~~~i~~~l~------~~~iP~~l~~Iv~evavkryNR-~g~EG~~S~Se 73 (112) T protein:vir:27 1 MTLDKDKVIKNVSVDLNTNDDALLKILLERVVNHFKSEYG------VEEIDDKLAFIFEDCVIKRFNR-RGAEGAKSESV 73 (112) T ss_pred CcchhHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHhcC------ccccchhHHHHHHHHHHHHhcc-cCccccceeec Confidence 6555555556666666667789999999999999998884 5789999999999999887632 22222110 Q ss_pred ---------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ---------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ---------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-..|.+-|.+|+.. .|+.. .| ..|++ T Consensus 74 eG~S~sf~d~~~df~~Y~~~l~~~~~~--~~~~~--------~G------~v~Fl 112 (112) T protein:vir:27 74 DGHSMSYYDNENEFKPYDDMLQRLYGT--SGQAK--------EG------EVLFL 112 (112) T ss_pred CceeeeecccccchhhhHHHHHHHHhh--cCCCC--------Cc------eeeeC Confidence 012335577777677642 11111 11 12233 No 32 >protein:vir:97267 Length: 172 # NCBI annotation: hypothetical protein ORF024 # Family: family:all:703 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294532;genbank:gi:149408253;genbank:GeneID:5237132 Probab=77.56 E-value=0.039 Score=28.31 Aligned_cols=118 Identities=14% Similarity=0.161 Sum_probs=61.5 Q ss_pred CCCCHHHHHHHhccCCCC---CCHHHHHHHHHHHHHHHHHH---Hhhhc------------------cCCCCCcchHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQ---VTDELLTKYIKEASNYIDAR---LGVAY------------------KTPFLVTPPIIHD 56 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~---~d~~~v~~Al~dA~~eID~Y---L~~RY------------------~lPL~~vP~~L~~ 56 (130) =|+|.+|...-+..+.-. .+++-.+++|..|+..||+- .+.|= ..|...+|.-|+. T Consensus 17 SYvtv~~a~aY~~~rg~~~~a~~~~~ke~aLi~A~~yiD~~~~f~G~r~~~~~Q~l~WPRtg~~d~~~~~~~~IP~~v~~ 96 (172) T protein:vir:97 17 AYISVEEFKTYHTDRGNSFAGSTDPQIEAAVIRATDYLDQRFNFVGKKRLGRDQTTEWPRTDAWDRDRYYINDIPPEVKE 96 (172) T ss_pred ccccHHHHHHHHHhcCcccCCCCcHHHHHHHHHHHHHHhhhhhcccCCCCCcchhhhcccCCCCCCcccccccccHHHHH Confidence 899999998877665322 33456889999999999973 33341 1355568999999 Q ss_pred HHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccce-ee-------------ecCCCcc Q lcl|NC_020479. 57 IAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGF-GT-------------TTDGEQI 122 (130) Q Consensus 57 ~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~-~~-------------~~~~~rv 122 (130) .||.+|.+-|.....++......... + -.|++.-|.++..-...+.++. .. ...+.-. T Consensus 97 A~~elA~~al~~~l~~d~~~~~~~~~------v--~~kr~kvg~i~~~y~~~~~~~~~~p~~~~v~aLL~p~gl~~~~~~ 168 (172) T protein:vir:97 97 ACAEYALRALAAELNPDPERNASGVA------V--LSKSEAVGPISESVTFVGGAVFQMPKYPAADQKLVRAGLVRSGGT 168 (172) T ss_pred HHHHHHHHHHhccccccccccccccc------c--eeeeeeecceeeEeeccCCCCCccccHHHHHHHHhhhccccCcce Confidence 99999998885543222111110000 0 0122222433331100001000 00 0112224 Q ss_pred cCCC Q lcl|NC_020479. 123 FTLD 126 (130) Q Consensus 123 F~R~ 126 (130) |-|. T Consensus 169 ~~r~ 172 (172) T protein:vir:97 169 LLRG 172 (172) T ss_pred eccC Confidence 4444 No 33 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=76.64 E-value=0.1 Score=25.95 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=65.3 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|. .+++.++-.|++|...|=.||.. ....+|+.|..+.+++|..+.-. ...|.... T Consensus 1 M~iL~~vK~~lgi----~~D~lL~~li~~a~~~i~~~l~~----~~~~iP~~l~~iv~evav~ryNR-~g~EG~~S~See 71 (110) T protein:vir:39 1 MAITDDLKKLLGG----SSDERLEVIEKRTRERLLLILSS----NIKEVPPELEYVVLDVSLKRFNR-IGQEGMQSYSQE 71 (110) T ss_pred CchHHHHHHhcCC----ChhHHHHHHHHHHHHHHHHHhCC----ChhhhhhHHHHHHHHHHHHHhcc-ccccccceeecC Confidence 3557888887776 36789999999999999999863 24568999999999999887632 22222111 Q ss_pred ------hhhHHHHHHHHHHHHHHH-HhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLIND-ILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~-Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++. ...|+-.+| .-|+| T Consensus 72 G~S~sf~~~d~~~y~~~l~~y~~~~~~~~~~~~g--------------~~~f~ 110 (110) T protein:vir:39 72 GLSMTFSESDFDEYADEIESWRKSKETEGDKKIG--------------RFRLY 110 (110) T ss_pred CeeeeecccCcchhHHHHHHHhhhccccccCcce--------------eeeeC Confidence 123456788888777654 233322222 23566 No 34 >protein:vir:4458 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700381;genbank:gi:23505453;genbank:GeneID:955660 Probab=76.39 E-value=0.14 Score=25.33 Aligned_cols=96 Identities=7% Similarity=0.021 Sum_probs=50.9 Q ss_pred CCCCHHHHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhhhccCC---CC-------CcchHHHHHHHHHHHHhhhcC Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSK-QVTDELLTKYIKEASNYIDARLGVAYKTP---FL-------VTPPIIHDIAVDLARFFFAED 69 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~-~~d~~~v~~Al~dA~~eID~YL~~RY~lP---L~-------~vP~~L~~~a~dIArY~L~~~ 69 (130) |++|.++++.--.=... .=|+..|+.-|.-|.+.|-+|++.++.=+ ++ .+|+.++. |+-+-.-++|.+ T Consensus 1 M~vtLee~K~hLRId~D~~dDD~lI~~~i~AA~~~i~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~-AiLllv~~~Y~N 79 (107) T protein:vir:44 1 MLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRL-GMLMLISHFYEN 79 (107) T ss_pred CCCCHHHHHHHcCCCCCCchhHHHHHHHHHHHHHHHHHhhcCccccccccccccccccccchhhHHH-HHHHHHHHHHhh Confidence 99999999875432212 23467899999999999999998775311 11 13455554 444444556766 Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHhC Q lcl|NC_020479. 70 AYTSQKPNLDEYYIKMKERIDKLINDILS 98 (130) Q Consensus 70 ~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~ 98 (130) |-........++-.-.+.-|. -++..=. T Consensus 80 Re~~~~~~~~~lP~~v~~Ll~-~yR~~p~ 107 (107) T protein:vir:44 80 RSSVTEVEKLDMPQSFGWLVG-PYRYFPQ 107 (107) T ss_pred hhhhccccccccCHHHHHHHH-HhhhcCC Confidence 532211111112112222221 1221111 No 35 >protein:vir:4228 Length: 125 # NCBI annotation: predicted 14.0Kd protein # Family: family:all:2817 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039683;swissprot:sw:q05225;genbank:gi:9625449;uniprot:Q05225;genbank:GeneID:2942926 Probab=75.39 E-value=0.15 Score=25.15 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=63.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CC-----CCCcchHHHHHHHHHHHHhhhcCC--cc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK-TP-----FLVTPPIIHDIAVDLARFFFAEDA--YT 72 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lP-----L~~vP~~L~~~a~dIArY~L~~~~--~~ 72 (130) -|||.+|..++.+.....-....|+.-|++|+..|- .|++ |+ -+..+..++.++.+..+ +|..+- .. T Consensus 2 ~~A~~eDV~a~w~r~lt~~e~~~v~~~L~~Ae~~Ir----~riPdL~~r~~~~~~~~~~v~~Vea~aV~-Rv~RNpeGy~ 76 (125) T protein:vir:42 2 AYATAEDVVTLWAKEPEPEVMALIERRLQQIERMIK----RRIPDLDVKAAASATFRADLIDIEADAVL-RLVRNPEGYL 76 (125) T ss_pred CcccHhHHHHHhCCCCChHHHHHHHHHHHHHHHHHH----HhCCCchhhhcccCcchhhHHHHHHHHHH-HHHhCCCccc Confidence 699999999999654333356789999999999874 3432 11 33456777777766543 354321 22 Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhCCeeecCC------CCCCccceeeecCCCcccC Q lcl|NC_020479. 73 SQKPNLDEYYIKMKERIDKLINDILSGVLIIDP------DVKLPAGFGTTTDGEQIFT 124 (130) Q Consensus 73 ~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~------~~~~~~g~~~~~~~~rvF~ 124 (130) + +-...|-..+ =.+.+.|++.|-. .+...+|.....|+--+=+ T Consensus 77 s------~T~G~Ys~~l---~~~~~~g~L~it~eEw~~L~p~~~~g~~~i~P~~~~~~ 125 (125) T protein:vir:42 77 S------ETDGAYTYQL---QADLSQGKLTILDEEWEILGVNSQKRMAVIVPNVVMPT 125 (125) T ss_pred c------ccchhHHHhh---hcccccCceeeCHHHHHhhCccccccceeecccceeCC Confidence 1 1124565544 2367889888632 2223445444445433333 No 36 >protein:vir:4512 Length: 107 # NCBI annotation: unknown # Family: family:all:363 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599038;genbank:gi:19548996;genbank:GeneID:935218 Probab=75.07 E-value=0.15 Score=25.09 Aligned_cols=96 Identities=18% Similarity=0.040 Sum_probs=52.2 Q ss_pred CCCCHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhhhcc-----CCCC-----CcchHHHHHHHHHHHHhhhcC Q lcl|NC_020479. 1 MYATPDDLRLVMNNLS-KQVTDELLTKYIKEASNYIDARLGVAYK-----TPFL-----VTPPIIHDIAVDLARFFFAED 69 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~-~~~d~~~v~~Al~dA~~eID~YL~~RY~-----lPL~-----~vP~~L~~~a~dIArY~L~~~ 69 (130) |++|.++++.--.=-. -.-+++.|+.-|+-|.+.|..|++.++. .|.. .+|+.++..++-+ .=++|.+ T Consensus 1 M~vtL~e~K~hLRId~D~~ddD~lI~~~i~AA~~~i~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~AvLll-v~~~Y~N 79 (107) T protein:vir:45 1 MLLKMEEIKLQLRLDDDFSDEDELLELLGKAAQSRTENFLNRKLYATADDRPADDPDGLVISDDVKLALLLL-VSHFYEN 79 (107) T ss_pred CCCCHHHHHHHcCCCCCCchhHHHHHHHHHHHHHHHHHHhccccccccccccccccccccCChhHHHHHHHH-HHHHHhh Confidence 9999999987544221 2345788999999999999999987653 2222 1355555544444 3445665 Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHhCCeeecCC Q lcl|NC_020479. 70 AYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDP 105 (130) Q Consensus 70 ~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~ 105 (130) |-........++-.-.+.-|. -++..- + T Consensus 80 Re~~~~~~~~~lp~~v~~Ll~-~~R~~~-------~ 107 (107) T protein:vir:45 80 RSTVTDVEKMELPMSFNWLVA-PYRLIP-------L 107 (107) T ss_pred hhhccccchhccchHHHHHHH-HHhhcC-------C Confidence 532111112223222333221 233211 1 No 37 >protein:vir:102863 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338138;genbank:gi:77020236;genbank:GeneID:3703772 Probab=74.92 E-value=0.15 Score=25.06 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=53.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |..|.+++..--.=.. . |++.|+..|+-|...|.++++.+| ...|+..+ +||-+-.=++|.+|-........+ T Consensus 1 M~vtLee~K~~LRID~-D-dD~lI~~~i~aA~~~i~~~~g~~~----~e~~~~~k-~Avl~lv~~~YenR~~~~~~~~~~ 73 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDG-D-DDPTITMLIKAAELYIYKATGKTF----TQTNEDAK-LLCLFLVADWYGNRLLVGEKASEK 73 (96) T ss_pred CcCCHHHHHHHcCCCC-c-hhHHHHHHHHHHHHHHHHhhCCCC----CCCcchHH-HHHHHHHHHHHhhhhhccccccch Confidence 9999999976433211 2 577999999999999999997654 34445444 455555555677764333223334 Q ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) +..-...-|. -|+ -+ -....++- T Consensus 74 ip~~v~sli~-qLr---~~-----~~~~~e~~ 96 (96) T protein:vir:10 74 IRTIVQSMIL-QLQ---YA-----SEPQEERK 96 (96) T ss_pred hhHHHHHHHH-HHh---hc-----CCcccccC Confidence 4444433332 122 11 11111221 No 38 >protein:vir:105005 Length: 96 # NCBI annotation: putative DNA packaging protein phage # Family: family:all:316 # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459970;genbank:gi:85701385;genbank:GeneID:3882146 Probab=74.92 E-value=0.15 Score=25.06 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=53.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |..|.+++..--.=.. . |++.|+..|+-|...|.++++.+| ...|+..+ +||-+-.=++|.+|-........+ T Consensus 1 M~vtLee~K~~LRID~-D-dD~lI~~~i~aA~~~i~~~~g~~~----~e~~~~~k-~Avl~lv~~~YenR~~~~~~~~~~ 73 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDG-D-DDPTITMLIKAAELYIYKATGKTF----TQTNEDAK-LLCLFLVADWYGNRLLVGEKASEK 73 (96) T ss_pred CcCCHHHHHHHcCCCC-c-hhHHHHHHHHHHHHHHHHhhCCCC----CCCcchHH-HHHHHHHHHHHhhhhhccccccch Confidence 9999999976433211 2 577999999999999999997654 34445444 455555555677764333223334 Q ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) +..-...-|. -|+ -+ -....++- T Consensus 74 ip~~v~sli~-qLr---~~-----~~~~~e~~ 96 (96) T protein:vir:10 74 IRTIVQSMIL-QLQ---YA-----SEPQEERK 96 (96) T ss_pred hhHHHHHHHH-HHh---hc-----CCcccccC Confidence 4444433332 122 11 11111221 No 39 >protein:vir:107614 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338189;genbank:gi:77020184;genbank:GeneID:3703745 Probab=74.92 E-value=0.15 Score=25.06 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=53.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |..|.+++..--.=.. . |++.|+..|+-|...|.++++.+| ...|+..+ +||-+-.=++|.+|-........+ T Consensus 1 M~vtLee~K~~LRID~-D-dD~lI~~~i~aA~~~i~~~~g~~~----~e~~~~~k-~Avl~lv~~~YenR~~~~~~~~~~ 73 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDG-D-DDPTITMLIKAAELYIYKATGKTF----TQTNEDAK-LLCLFLVADWYGNRLLVGEKASEK 73 (96) T ss_pred CcCCHHHHHHHcCCCC-c-hhHHHHHHHHHHHHHHHHhhCCCC----CCCcchHH-HHHHHHHHHHHhhhhhccccccch Confidence 9999999976433211 2 577999999999999999997654 34445444 455555555677764333223334 Q ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) +..-...-|. -|+ -+ -....++- T Consensus 74 ip~~v~sli~-qLr---~~-----~~~~~e~~ 96 (96) T protein:vir:10 74 IRTIVQSMIL-QLQ---YA-----SEPQEERK 96 (96) T ss_pred hhHHHHHHHH-HHh---hc-----CCcccccC Confidence 4444433332 122 11 11111221 No 40 >protein:vir:102083 Length: 96 # NCBI annotation: DNA packaging protein # Family: family:all:316 # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512316;genbank:gi:89152485;genbank:GeneID:3953076 Probab=74.92 E-value=0.15 Score=25.06 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=53.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |..|.+++..--.=.. . |++.|+..|+-|...|.++++.+| ...|+..+ +||-+-.=++|.+|-........+ T Consensus 1 M~vtLee~K~~LRID~-D-dD~lI~~~i~aA~~~i~~~~g~~~----~e~~~~~k-~Avl~lv~~~YenR~~~~~~~~~~ 73 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDG-D-DDPTITMLIKAAELYIYKATGKTF----TQTNEDAK-LLCLFLVADWYGNRLLVGEKASEK 73 (96) T ss_pred CcCCHHHHHHHcCCCC-c-hhHHHHHHHHHHHHHHHHhhCCCC----CCCcchHH-HHHHHHHHHHHhhhhhccccccch Confidence 9999999976433211 2 577999999999999999997654 34445444 455555555677764333223334 Q ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) +..-...-|. -|+ -+ -....++- T Consensus 74 ip~~v~sli~-qLr---~~-----~~~~~e~~ 96 (96) T protein:vir:10 74 IRTIVQSMIL-QLQ---YA-----SEPQEERK 96 (96) T ss_pred hhHHHHHHHH-HHh---hc-----CCcccccC Confidence 4444433332 122 11 11111221 No 41 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=74.21 E-value=0.14 Score=25.33 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=64.2 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|. .+++.++-.|++|...|=.||.. ....+|+.|..+.+++|..+.-. ...|.... T Consensus 1 M~~L~~vK~~lg~----~~D~lL~~li~~a~~~i~~~~~~----~~~eiP~~l~~iv~evav~ryNR-~g~EG~~S~See 71 (110) T protein:vir:36 1 MAITDDLKMLLGG----SLDERLEVIEKRTRDRLLLILGS----DIKEVPPELEYVVLDVSLKRFNR-IGQEGMQSYSQE 71 (110) T ss_pred ChhHHHHHhhcCC----ChhHHHHHHHHHHHHHHHHHhCC----ChhhhhhHHHHHHHHHHHHHhcc-ccccccceeecC Confidence 4667777777664 46789999999999999999864 34578999999999999877632 22222111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|.+.|.+|++.=..+ ...+ .+.-|+| T Consensus 72 G~S~sf~~~d~~~y~~~l~~y~~~~~~~---------~~~~----~g~~~f~ 110 (110) T protein:vir:36 72 GLSMTFSESDFDEYADEIESWRKSRETE---------GDKK----IGRFRLY 110 (110) T ss_pred CceeeecccCcchHHHHHHHHHhhhccc---------cCCc----ceeeeeC Confidence 1233467888888887632111 0111 1223666 No 42 >protein:vir:95004 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224025;genbank:gi:62327312;genbank:GeneID:5176832 Probab=72.47 E-value=0.056 Score=27.46 Aligned_cols=113 Identities=14% Similarity=0.129 Sum_probs=61.0 Q ss_pred CCCCHHHHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHH----Hhhh------------------ccCCCCCcchHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSK--QVTDELLTKYIKEASNYIDAR----LGVA------------------YKTPFLVTPPIIHD 56 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~--~~d~~~v~~Al~dA~~eID~Y----L~~R------------------Y~lPL~~vP~~L~~ 56 (130) =|+|.++...-+.++.- ..|+...+.+|..|+..||+| ++.| -.+|-..+|..++. T Consensus 16 SYvt~~ea~aY~~~rg~~~~~dd~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~g~~~~~~~IP~~V~~ 95 (169) T protein:vir:95 16 SYVSLEDGRALAAKYGLELPEDDIAAEASLRNGAVYVGLFESQMCGRRVSANQALAFPRTGIDLHGFPQPSNVIPSLVIQ 95 (169) T ss_pred ccccHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHhhccccccccccCCcchhhccccCCceecccccccccchHHHHH Confidence 89999999887776543 346778999999999999993 2221 13567789999999 Q ss_pred HHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceee------------e-cCC---- Q lcl|NC_020479. 57 IAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGT------------T-TDG---- 119 (130) Q Consensus 57 ~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~------------~-~~~---- 119 (130) .||.+|.+-+-..... ... +. .+ + + -+ .-.|-++.--....++++.+ . .++ T Consensus 96 A~~elA~~~~~g~~~~--~~~-~~--~~----v-~-~e-~v~G~i~veY~~~~~~~~~~~~~a~~~LL~p~l~g~~g~~~ 163 (169) T protein:vir:95 96 AQVMAAVEYGAGTDVR--GST-DG--RE----V-Q-TE-RVEGAVTVSYFKNGYSGGTVSITAADDALRPLLCGSNNAYS 163 (169) T ss_pred HHHHHHHHHHcCcccc--CCC-Cc--cc----e-e-ee-eeccceeEeecCCCCcCccccHHHHHHhhhhhcccCCCcce Confidence 9999999987532111 111 00 00 1 0 01 11244433211111111000 0 000 Q ss_pred CcccCC Q lcl|NC_020479. 120 EQIFTL 125 (130) Q Consensus 120 ~rvF~R 125 (130) -++|-. T Consensus 164 i~~~rg 169 (169) T protein:vir:95 164 FNVFRG 169 (169) T ss_pred eeeecC Confidence 023322 No 43 >protein:vir:99517 Length: 124 # NCBI annotation: putative protein # Family: family:all:372 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958539;genbank:gi:41179321;genbank:GeneID:2717155 Probab=71.88 E-value=0.18 Score=24.63 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=66.0 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc--- Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN--- 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~--- 77 (130) |=.+++++..+.|-.. ...++.++..|++|...|=.||.. . ..+|..|..++.++|.-+.- +...|.... T Consensus 5 ~~~~Le~vK~~LgI~d-~~~D~lL~~lI~~a~~~i~~~l~~-~----e~iP~~L~~Iv~evavkryN-R~g~EG~~S~Se 77 (124) T protein:vir:99 5 LDDQLKKLKTALQLTD-TKHDDLLKLYLEDATDFLKLRLSI-T----GVIPTEMLAIVRGAAVKKFN-RFKNEGMASYSQ 77 (124) T ss_pred hHHHHHHHHHHhCCCC-cchhHHHHHHHHHHHHHHHHhcCC-c----ccchhHHHHHHHHHHHHHhc-ccCCcccceeee Confidence 5556777777777643 333578999999999999999852 1 34899999999888876652 222222111 Q ss_pred -------hhhHHHHHHHHHHHHHHHH-hCCeeecCCCCCCccceeeecCC-CcccCCCC Q lcl|NC_020479. 78 -------LDEYYIKMKERIDKLINDI-LSGVLIIDPDVKLPAGFGTTTDG-EQIFTLDR 127 (130) Q Consensus 78 -------~~~~~~~y~~ai~k~L~~I-a~G~~~Lg~~~~~~~g~~~~~~~-~rvF~R~~ 127 (130) .+..-+.|++-|.+|.+.- ..|+... .+|= .|.=+|-| T Consensus 78 eG~S~sf~d~d~~~y~~~L~~y~~~~~~~g~~~f------------i~~~~~~~~~~~~ 124 (124) T protein:vir:99 78 DGESITFASSDFDEWEDEINQWRKDHTGMNKGMW------------VNPYEIRQNGRAN 124 (124) T ss_pred CceeeeecccChhhHHHHHHHHhhccCcCCceee------------ecCccccCCCCCC Confidence 2345678888888887752 2333222 1221 13334444 No 44 >protein:vir:100245 Length: 113 # NCBI annotation: gp74 # Family: family:all:363 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355410;genbank:gi:77864700;genbank:GeneID:3725967 Probab=70.48 E-value=0.21 Score=24.32 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=52.8 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhc-cCCC---------------CCcchHHHHHHHHHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAY-KTPF---------------LVTPPIIHDIAVDLARF 64 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY-~lPL---------------~~vP~~L~~~a~dIArY 64 (130) |++|.++++.--.=. ..-|++.|+.-|.-|++.|-.||..++ ..+. .++|+.++..+.- -.= T Consensus 2 ~~vtLee~K~hLRvd-~d~dD~lI~~li~AA~~~ve~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AvLl-lv~ 79 (113) T protein:vir:10 2 ALVELKLALGFVRAN-AGVEDDVVQMLLDAATQSAVDYLNRQVFETEDAMTTAIEAGTAGQNPMVVNAAIRAAILK-ITA 79 (113) T ss_pred CCCCHHHHHHHcCCC-CCcchHHHHHHHHHHHHHHHHHhCccccccccccccccccccccccccccChHHHHHHHH-HHH Confidence 999999998754422 335899999999999999999997663 2221 1256666655444 444 Q ss_pred hhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCe Q lcl|NC_020479. 65 FFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGV 100 (130) Q Consensus 65 ~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~ 100 (130) ++|.+|-........++-.-.+.-|. -++ +--|- T Consensus 80 ~~Y~nRe~~~~~~~~~lP~~v~~Ll~-~yR-~~~g~ 113 (113) T protein:vir:10 80 ELYANREDTAFGPITELPLNARALLR-PHR-IIPGV 113 (113) T ss_pred HHHhhhhhhchhhhhccCHHHHHHHH-Hhh-hhcCC Confidence 46665532211111122112222221 111 22233 No 45 >protein:vir:95176 Length: 172 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:703 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293420;genbank:gi:148912841;genbank:GeneID:5228251 Probab=67.62 E-value=0.24 Score=23.96 Aligned_cols=110 Identities=17% Similarity=0.250 Sum_probs=58.5 Q ss_pred CCCCHHHHHHHhccCCCC--CCHHHHHHHHHHHHHHHHHH-H---hh------------------hccCCCCCcchHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQ--VTDELLTKYIKEASNYIDAR-L---GV------------------AYKTPFLVTPPIIHD 56 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~--~d~~~v~~Al~dA~~eID~Y-L---~~------------------RY~lPL~~vP~~L~~ 56 (130) =|+|.++...-+.++... .+++..++||..|+..||+| + +. .-.+|-..+|..|+. T Consensus 18 SYvtv~ea~aY~~~rg~~~~~~~~~ke~aL~~A~dyid~~~~~f~G~r~~~~Q~l~wPR~g~~~~~~~v~~~~IP~~V~~ 97 (172) T protein:vir:95 18 SYVSVADARIYASNRGVELPLDDDELAAMLIRSTDYLEAQACRFQGKPTSTTQALQWPRTGVFLNEDEVPSNVIPKSLIA 97 (172) T ss_pred ccccHHHHHHHHHhcCCcCCCChHHHHHHHHHHHHHhhccCCceeeeecCCcccccCCcCCcccCcccccccchhHHHHH Confidence 899999999877766433 57788899999999999985 2 11 112466788999999 Q ss_pred HHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccc---------------------eee Q lcl|NC_020479. 57 IAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAG---------------------FGT 115 (130) Q Consensus 57 ~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g---------------------~~~ 115 (130) .||.+|.+-+ .+.-.. +..+ - ...+ | .++| |-++.--....+++ ..+ T Consensus 98 A~~elA~~~~-~~~~~~--~~~~-~----~~~v-k-~~kV--G~I~veY~~~~~~~~~~~~~~v~~LL~p~l~~~~~~~~ 165 (172) T protein:vir:95 98 AQVQLTMAIN-AGFDLQ--PNVS-P----QDYV-T-REKV--GPIETEYADPLSVGIMPTFTAANALLAPLFGECASNKF 165 (172) T ss_pred HHHHHHHHHH-cCcccc--ccCC-c----ccce-e-EEec--cceEEeeccCCCCCCcccHHHHHHHHhhhhcccCCcce Confidence 9999996544 321101 1000 0 0111 1 1122 43333110000000 011 Q ss_pred ecCCCcc Q lcl|NC_020479. 116 TTDGEQI 122 (130) Q Consensus 116 ~~~~~rv 122 (130) ...--|+ T Consensus 166 ~~r~~r~ 172 (172) T protein:vir:95 166 ALRTIRV 172 (172) T ss_pred eeEEEeC Confidence 1111122 No 46 >protein:vir:94955 Length: 170 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239280;genbank:gi:66392062;genbank:GeneID:5076600 Probab=67.53 E-value=0.059 Score=27.31 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=62.1 Q ss_pred CCCCHHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHH---Hhhh------------------ccCCCCCcchHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-----SKQVTDELLTKYIKEASNYIDAR---LGVA------------------YKTPFLVTPPII 54 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-----~~~~d~~~v~~Al~dA~~eID~Y---L~~R------------------Y~lPL~~vP~~L 54 (130) =|+|.+|...-+..+ ....+++..++||-.|+..||+- .+.| ..+|-..+|..| T Consensus 15 SYvtv~ea~aY~~~r~~~~~w~~~~~~~~e~aL~~A~dyId~~~~f~G~r~~~~Q~l~wPR~g~~~dg~~~~~~~IP~~V 94 (170) T protein:vir:94 15 SYVTVAEANSYFDGSYGRPLWTSASEDEKASLVISASRYLDQMMAWIGAPTNPEQSMWWPCKNAVIGGMTLSQVSIPVKV 94 (170) T ss_pred ceecHHHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHhccccccccccCCcchhhcccccCcccCccccccchhhHHH Confidence 899999997654443 24788999999999999999972 2222 124667899999 Q ss_pred HHHHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccce------------------ee- Q lcl|NC_020479. 55 HDIAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGF------------------GT- 115 (130) Q Consensus 55 ~~~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~------------------~~- 115 (130) +..||.+|.+.+-..... . ..+ .++ | -++| |-++.--...+++.. +. T Consensus 95 ~~Aq~elA~~~~~~~~~~--~-~~~-------~~v-~-~~kV--G~i~veY~~~~~~~~~~~~v~~LL~p~l~~~~~g~~ 160 (170) T protein:vir:94 95 KIAVFELAYFMLESGAAL--S-FAD-------QTI-D-SVKV--GTIRVEFTKNSTDAGLPTFVEAMLSGFGSPVLYGSN 160 (170) T ss_pred HHHHHHHHHHHHhCcccC--c-ccc-------cce-e-eEec--ceeEEEecCCCCCCccHHHHHHHhhhhhcccccccc Confidence 999999999877432211 1 111 112 1 2334 555542111111000 00 Q ss_pred ecCCCcccCC Q lcl|NC_020479. 116 TTDGEQIFTL 125 (130) Q Consensus 116 ~~~~~rvF~R 125 (130) ...+-+||-. T Consensus 161 ~~~~~~~~r~ 170 (170) T protein:vir:94 161 AARSIDLVRA 170 (170) T ss_pred ccceeeeecC Confidence 0011233332 No 47 >protein:vir:4857 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049397;genbank:gi:9632425;genbank:GeneID:1258493 Probab=67.53 E-value=0.25 Score=23.88 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=53.7 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCC---CCcchHHHHHHHHHHHHhhhcCCccccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPF---LVTPPIIHDIAVDLARFFFAEDAYTSQKPN 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL---~~vP~~L~~~a~dIArY~L~~~~~~~~~~~ 77 (130) |..|.+++..--.= ...-+++.|+..|.-|.+.|.+|++.. .+. ..+|+.++..++-++- ++|.+|-+..... T Consensus 1 M~vtLeevK~~LRI-D~d~dD~li~~~i~aA~~~i~~~ig~~--~~~~~~~~~~~~~~~Avl~lv~-~~Y~NR~~~~~~~ 76 (104) T protein:vir:48 1 MSVSKETIMQTLNL-DETDDTALIPAYIESARQYVVNSVGDD--PKFYNLDSVRALFDTAVIALTS-SYFTYRVALTDTA 76 (104) T ss_pred CcccHHHHHHHcCC-CCccchHHHHHHHHHHHHHHHHhhCCC--CCcccccCCChhHHHHHHHHHH-HHHhhhhhhcccc Confidence 99999999764432 244578999999999999999999742 222 2456665665555555 4566554322222 Q ss_pred hhhHHHHHHHHHHH---HHHHHhCCeee Q lcl|NC_020479. 78 LDEYYIKMKERIDK---LINDILSGVLI 102 (130) Q Consensus 78 ~~~~~~~y~~ai~k---~L~~Ia~G~~~ 102 (130) ..++-.-.+.-|.+ |.....++.-. T Consensus 77 ~~~ip~~v~sli~~lR~~y~~~~~~~~~ 104 (104) T protein:vir:48 77 TYPVNLTLNSIIGQLRGLYATYSEERGD 104 (104) T ss_pred cchhhHHHHHHHHHHHHhhhhhcccCCC Confidence 22332222222211 11112222111 No 48 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=64.11 E-value=0.31 Score=23.41 Aligned_cols=100 Identities=12% Similarity=0.151 Sum_probs=64.3 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc---- Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN---- 77 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~---- 77 (130) -.+.+++..+.|.- ++..++-.|++|...|-.||+.. ...+|..|.-+.+++|.-+.-. ...|.... T Consensus 1 M~~L~~vK~~lgi~----~D~lL~~li~~a~~~i~~~l~~~----~~~iP~~l~~iv~evav~ryNR-~g~EG~~S~See 71 (110) T protein:vir:74 1 MAITYEIKKLLGGS----SDERLEIIEKRTRERLLLILGSD----LKEVPPELEYVVLDVSLKRFNR-IGQEGMQSYSQE 71 (110) T ss_pred ChHHHHHHHHcCCC----hhHHHHHHHHHHHHHHHHHhCCC----hhhhhHHHHHHHHHHHHHHhcc-cCccccceeecC Confidence 46778888887763 67899999999999999998632 2468999999999998877632 22222111 Q ss_pred ------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+..-+.|++-|.+|++.- ......|. +.-|+| T Consensus 72 G~S~sf~~~d~~~y~~~l~~y~~~~---------~~~~~~~~----~~~~f~ 110 (110) T protein:vir:74 72 GLSMTFSESDFDEYADEIESRRKSK---------ETEGDKKI----GRFRLY 110 (110) T ss_pred CeeeeecccchhhHHHHHHHHHhhc---------cccccCcc----eeeeeC Confidence 2345667888887777631 01111111 123666 No 49 >protein:vir:78383 Length: 169 # NCBI annotation: hypothetical protein # Family: family:all:703 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110841;genbank:gi:134288602;genbank:GeneID:5179646 Probab=64.02 E-value=0.31 Score=23.39 Aligned_cols=113 Identities=14% Similarity=0.151 Sum_probs=59.6 Q ss_pred CCCCHHHHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHH----Hhhh------------------ccCCCCCcchHHHH Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSK--QVTDELLTKYIKEASNYIDAR----LGVA------------------YKTPFLVTPPIIHD 56 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~--~~d~~~v~~Al~dA~~eID~Y----L~~R------------------Y~lPL~~vP~~L~~ 56 (130) =|+|.++...-+.++.- ..|+...+.||..|+..||+| ++.| ..+|...+|..++. T Consensus 16 SYvtv~~a~aY~~~rg~~~~~d~~~~e~aL~~A~~yid~~~~~f~G~r~~~~Q~l~wPRtg~~~~g~~~~~~~IP~~v~~ 95 (169) T protein:vir:78 16 SYVSLEDGRALAAKYGLELPEDDTAAEAALRNGAVYVGLFESQMCGRRVSANQALAFPRTGVTLHGFPQPSNVIPPLVIQ 95 (169) T ss_pred ccccHHHHHHHHHHcCCcCCCChHHHHHHHHHHHHHhhhccccceeeeCCcccccccccCCceecccccccccchHHHHH Confidence 89999999887776543 346888999999999999984 2222 23556779999999 Q ss_pred HHHHHHHHhhhcCCccccccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceee------------e-cCC---- Q lcl|NC_020479. 57 IAVDLARFFFAEDAYTSQKPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGT------------T-TDG---- 119 (130) Q Consensus 57 ~a~dIArY~L~~~~~~~~~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~------------~-~~~---- 119 (130) .||.+|.+.+-...... .... ..+ + .++ -.|-+..--....++++.. . .++ T Consensus 96 A~~elA~~~~~g~~~~~--~~~~-------~~v-~-~e~-v~G~i~veY~~~~~~~~~~~~~~~~~LL~p~l~~~~g~~~ 163 (169) T protein:vir:78 96 AQVMAAVEYGAGTDVRG--STDG-------REV-Q-TER-VEGAVTVSYFKNGYSGGTVSITTADDALRPLLCGSNNAYS 163 (169) T ss_pred HHHHHHHHHhcCcccCC--CCCc-------cee-E-EEE-ecCceeEeecCCCCCCCcccHHHHHHHhhhhcccCCCcce Confidence 99999998774321110 0000 001 0 010 0133332100000110000 0 001 Q ss_pred CcccCC Q lcl|NC_020479. 120 EQIFTL 125 (130) Q Consensus 120 ~rvF~R 125 (130) -++|-. T Consensus 164 i~~~rg 169 (169) T protein:vir:78 164 FNVFRG 169 (169) T ss_pred eeeecC Confidence 133322 No 50 >protein:vir:96488 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238494;genbank:gi:66391770;genbank:GeneID:5176910 Probab=63.15 E-value=0.32 Score=23.28 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=60.7 Q ss_pred CCCHHHHHH--HhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc-- Q lcl|NC_020479. 2 YATPDDLRL--VMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN-- 77 (130) Q Consensus 2 YaT~~Dl~~--~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~-- 77 (130) -.|.+++.. ..+...+..++..++..|.+|+..|=.||. ...+|..|..+..++|.-+.-. ..+|.... T Consensus 1 M~~L~~~K~l~~ik~~~~~~~D~lL~~ii~~a~~~i~~~l~------~~~iP~~L~~Iv~evavkryNR-~g~EG~~S~S 73 (113) T protein:vir:96 1 MMALDKDKVIKNVSVDLNTDDDVLLKILLERVVNHFKSEYG------VEEIDDKLAFIFEDCVIKRFNR-RGAEGAKSES 73 (113) T ss_pred CchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHHHhc------ccccchhHHHHHHHHHHHHhcC-CCccccceec Confidence 236777544 444556677789999999999999999995 3789999999998888776532 22222110 Q ss_pred ----------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ----------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ----------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) ....-..|.+-|.+|++. .|+.. . +.-|++ T Consensus 74 ~eG~S~sf~d~~~df~eY~~~l~~~~~~--~~~~~--------~------G~v~Fl 113 (113) T protein:vir:96 74 VDGHSMSYYDNENEFKPYDDMLQRLYGT--SGQSK--------E------GEVLFL 113 (113) T ss_pred cCceeeeecccccccchhHHHHHHHHhh--cCCCC--------C------ceeeeC Confidence 112345566777666542 12111 1 122333 No 51 >protein:vir:78478 Length: 149 # NCBI annotation: gp16 # Family: family:all:2817 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491587;genbank:gi:157786410;genbank:GeneID:5625630 Probab=61.47 E-value=0.35 Score=23.06 Aligned_cols=115 Identities=13% Similarity=0.176 Sum_probs=61.2 Q ss_pred CCCCHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CCC-CCcc---hHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMN-NLSKQVTDELLTKYIKEASNYIDARLGVAYK-TPF-LVTP---PIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~g-e~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lPL-~~vP---~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|+.++.+ .++ .-..+.++.-|++|+..|=. |++ |+= .+.| ..+++++|++..=-+.. + +. T Consensus 2 afAtv~Dve~rw~r~LT-~eE~~~ae~lL~dAs~~IR~----~iP~La~~~~dp~~~a~v~~V~~~mV~R~~rn--p-eG 73 (149) T protein:vir:78 2 AYAEPSDVVARLGRPLT-DDEETQVETFLEDAEIEIRS----RIPDLDDKAEDEDYLKRVIKVEASAVTRLIRN--P-DG 73 (149) T ss_pred CcCCHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHH----hccccccccCCcchhhHHHHHHHHHHHHHhcC--C-CC Confidence 6999999999995 443 22245799999999999855 442 221 1233 56889999987654522 1 11 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeec--------CCCCCCccceeeecC----------------CCcccCCCCCC- Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLII--------DPDVKLPAGFGTTTD----------------GEQIFTLDRPE- 129 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~L--------g~~~~~~~g~~~~~~----------------~~rvF~R~~~~- 129 (130) - +.+-...|-+.+. + ....|++-| |+.. +.|.-...| .=.+|.-..|. T Consensus 74 ~--~S~T~G~YS~slt-~--~np~G~LylT~~E~a~LG~~r--~~G~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (149) T protein:vir:78 74 Y--IGETDGNYSYQLN-W--RLNTGAIEITDKEWAQLGLSK--NVGVLNVRPKTPLERSGEYPAFGSVEWQVFQQSSPLY 146 (149) T ss_pred e--eeeecchhhhhhh-c--cCCCCceeeCHHHHHhhCCcc--cccceeecccCccccCCCCCcccceeeeeeeccCccc Confidence 1 1112245655442 2 345566554 3321 112111111 11455555544 Q ss_pred C Q lcl|NC_020479. 130 W 130 (130) Q Consensus 130 w 130 (130) | T Consensus 147 ~ 147 (149) T protein:vir:78 147 W 147 (149) T ss_pred c Confidence 3 No 52 >protein:vir:78254 Length: 149 # NCBI annotation: gp16 # Family: family:all:2817 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491668;genbank:gi:157786492;genbank:GeneID:5625732 Probab=61.47 E-value=0.35 Score=23.06 Aligned_cols=115 Identities=13% Similarity=0.176 Sum_probs=61.2 Q ss_pred CCCCHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CCC-CCcc---hHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMN-NLSKQVTDELLTKYIKEASNYIDARLGVAYK-TPF-LVTP---PIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~g-e~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lPL-~~vP---~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|+.++.+ .++ .-..+.++.-|++|+..|=. |++ |+= .+.| ..+++++|++..=-+.. + +. T Consensus 2 afAtv~Dve~rw~r~LT-~eE~~~ae~lL~dAs~~IR~----~iP~La~~~~dp~~~a~v~~V~~~mV~R~~rn--p-eG 73 (149) T protein:vir:78 2 AYAEPSDVVARLGRPLT-DDEETQVETFLEDAEIEIRS----RIPDLDDKAEDEDYLKRVIKVEASAVTRLIRN--P-DG 73 (149) T ss_pred CcCCHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHH----hccccccccCCcchhhHHHHHHHHHHHHHhcC--C-CC Confidence 6999999999995 443 22245799999999999855 442 221 1233 56889999987654522 1 11 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeec--------CCCCCCccceeeecC----------------CCcccCCCCCC- Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLII--------DPDVKLPAGFGTTTD----------------GEQIFTLDRPE- 129 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~L--------g~~~~~~~g~~~~~~----------------~~rvF~R~~~~- 129 (130) - +.+-...|-+.+. + ....|++-| |+.. +.|.-...| .=.+|.-..|. T Consensus 74 ~--~S~T~G~YS~slt-~--~np~G~LylT~~E~a~LG~~r--~~G~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (149) T protein:vir:78 74 Y--IGETDGNYSYQLN-W--RLNTGAIEITDKEWAQLGLSK--NVGVLNVRPKTPLERSGEYPAFGSVEWQVFQQSSPLY 146 (149) T ss_pred e--eeeecchhhhhhh-c--cCCCCceeeCHHHHHhhCCcc--cccceeecccCccccCCCCCcccceeeeeeeccCccc Confidence 1 1112245655442 2 345566554 3321 112111111 11455555544 Q ss_pred C Q lcl|NC_020479. 130 W 130 (130) Q Consensus 130 w 130 (130) | T Consensus 147 ~ 147 (149) T protein:vir:78 147 W 147 (149) T ss_pred c Confidence 3 No 53 >protein:vir:79050 Length: 133 # NCBI annotation: hypothetical protein # Family: family:all:6416 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110727;genbank:gi:134287344;genbank:GeneID:4955224 Probab=60.91 E-value=0.28 Score=23.64 Aligned_cols=118 Identities=12% Similarity=0.077 Sum_probs=68.1 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDE 80 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~ 80 (130) |--+.++....||-...+-|..+++=|++++...|--|+- +..+|.-|..+..++|.=.+-....+.......+ T Consensus 5 i~e~i~~~Lk~~~~~~~~~d~~iL~fa~e~~~n~I~N~cN------i~eiP~~L~~v~~~mai~~fl~~kk~~~~~~l~~ 78 (133) T protein:vir:79 5 IIDDIEKRLESFGYILKDGDKWLIDFVREKIENIIKLDCN------IKTMPIELKEIEADMIVGEFLFTKKNMGQLDIES 78 (133) T ss_pred HHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHHHhhhcC------hhhcchhHHHHHHHHHHHHHHhcccccCCCCccc Confidence 4444555555666555566778888899999999999996 5889999999999887653322222222222222 Q ss_pred HHHHHHHHHHHHHHHHhCCeeecCCC--CCC---cc---ce--eeecCCCcccCC-CCCCC Q lcl|NC_020479. 81 YYIKMKERIDKLINDILSGVLIIDPD--VKL---PA---GF--GTTTDGEQIFTL-DRPEW 130 (130) Q Consensus 81 ~~~~y~~ai~k~L~~Ia~G~~~Lg~~--~~~---~~---g~--~~~~~~~rvF~R-~~~~w 130 (130) + +.+- ..+.|..|..++... +.+ ++ .. --...+.+.|.| +..+| T Consensus 79 ~--D~~~----~v~sIkeGDTsv~f~~~~~s~t~eq~l~s~i~~L~~~~k~~l~~yRkLrW 133 (133) T protein:vir:79 79 I--NFEA----VEKSISEGDTKVDFAIGSGSQTPEQRFDSLIAYLTAYGKNKILTFRCLRW 133 (133) T ss_pred c--cchh----hhhheecccceeecccCCCccchhHHHHHHHHHHhhcccchhhccccccC Confidence 2 2211 137788995554332 111 11 00 012334455554 66799 No 54 >protein:vir:4904 Length: 113 # NCBI annotation: gp113 # Family: family:all:372 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056682;genbank:gi:9635017;genbank:GeneID:1262667 Probab=60.90 E-value=0.36 Score=22.99 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=55.5 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc--- Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN--- 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~--- 77 (130) |=.+..-+......+.+..|+..++..|.+|+..|=.||. +..+|..|..+.+++|..+.-. ..+|.... T Consensus 2 ~~l~~~~~L~~vK~~lgi~dD~lL~~li~~a~~~i~~~l~------~~~iP~~l~~Iv~evavkryNR-~g~EG~~S~Se 74 (113) T protein:vir:49 2 MALDKEKVIQNVSVDLNINDDNLLGILLERIVNHFKAEYG------VDEVDDNLAFIFEDCLVKRFNR-RGAEGARSESI 74 (113) T ss_pred cchhHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHhC------ccccchHHHHHHHHHHHHHhcc-cCccccceeec Confidence 2111112222233333445688999999999999999985 3789999999999999887632 22222110 Q ss_pred ---h------hhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 78 ---L------DEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 78 ---~------~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) + +..-..|.+-|.+|++. .|+.+ . +..|+| T Consensus 75 eG~S~sf~d~~~df~eY~~~l~~~~~~--~~~~~--------~------G~v~Fl 113 (113) T protein:vir:49 75 DGHSMSYYDNENEFDPYDNMLQRLYGT--SGQAK--------E------GEVLFL 113 (113) T ss_pred CceeeeecccccccchhHHHHHHHHhh--cCCCC--------C------cceeeC Confidence 0 11223566667667642 12111 1 122333 No 55 >protein:vir:4998 Length: 106 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049972;genbank:gi:9632944;genbank:GeneID:1262107 Probab=60.49 E-value=0.37 Score=22.94 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=56.5 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCC---CCcchHHHHHHHHHHHHhhhcCCccccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPF---LVTPPIIHDIAVDLARFFFAEDAYTSQKPN 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL---~~vP~~L~~~a~dIArY~L~~~~~~~~~~~ 77 (130) |..|.+++..--+= ...-|++.|+..|.-|.+.|-++++.. .++ ..+++..+..|+-++-+| |.+|-.-.... T Consensus 1 M~v~Le~iK~~LRI-D~ddDD~li~~~i~AA~~yi~~aig~~--~~~~~~~~~~~~~~~Avl~Lv~~~-YeNR~~~~~~~ 76 (106) T protein:vir:49 1 MSVSKEIIMQTLNL-DETDDTALIPAYIESAQQYIINAVGSD--PKFYELENVKYLFDTAVIALTSTY-FTYRVALNETL 76 (106) T ss_pred CcccHHHHHHHcCC-CCccchHHHHHHHHHHHHHHHhhcCCC--CCCCCcCCCchHHHHHHHHHHHHH-HhhcccccCcc Confidence 99999999875443 233489999999999999999999754 233 245666665555555554 55543222222 Q ss_pred hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 78 LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 78 ~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) ..++..-...-|. =|+.. -..=-+...++| T Consensus 77 ~~~vp~~v~slI~-qLR~~----y~~~~e~~~~~~ 106 (106) T protein:vir:49 77 TYPINLTLNSIIG-QLRGL----YATYSDGGVNNA 106 (106) T ss_pred cccccHHHHHHHH-HHHhh----hhhhhhccccCC Confidence 2334444434332 23322 100001112222 No 56 >protein:vir:1329 Length: 122 # NCBI annotation: gp37 # Family: family:all:11657 # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047928;swissprot:trembl:q9zxb0;genbank:gi:9631146;uniprot:Q9ZXB0;genbank:GeneID:2715909 Probab=60.16 E-value=0.24 Score=24.01 Aligned_cols=110 Identities=24% Similarity=0.215 Sum_probs=66.9 Q ss_pred CCCCHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) -|+|.++|+...|-. +....++.+..||+-.-+.+..|++..+..-=.+.|..++-...-+||-+... +.+ T Consensus 2 ayatieelraldglddsalfsdellsdaidfsvetveaycgrkwdtaedptpetirwcvrtlarqyvld--hvs------ 73 (122) T protein:vir:13 2 AYATIEELRALDGLDDSALFSDELLSDAIDFSVETVEAYCGRKWDTAEDPTPETIRWCVRTLARQYVLD--HVS------ 73 (122) T ss_pred cchhhhhhhhhcCccchhhhhhhhhhhhhhhhhhhhhhhhCcccCCcCCCChhHHHHHHHHHHHHHHHH--Hhh------ Confidence 799999999988853 45577889999999999999999999999988889998876666788876642 111 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCC------CCCccceeee----cCCCcccC Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPD------VKLPAGFGTT----TDGEQIFT 124 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~------~~~~~g~~~~----~~~~rvF~ 124 (130) .+-+| ++ + |+ --=|.+.|.-. ++-+..-+.. ..-.-+|- T Consensus 74 ripdr---al-q-lq-sefgsiqlaqaggnwrptslpevnaklnlyrvrlpfifm 122 (122) T protein:vir:13 74 RIPDR---AL-Q-LQ-SEFGSIQLAQAGGNWRPTSLPEVNAKLNLYRVRLPFIFM 122 (122) T ss_pred hcchh---hh-h-hh-hcccceeeeccCCCcccCcccccccceeeeeeecceeeC Confidence 12222 12 1 22 23466665311 1111100000 00011233 No 57 >protein:vir:104088 Length: 125 # NCBI annotation: gp20 # Family: family:all:2817 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655599;genbank:gi:109392470;genbank:GeneID:4156956 Probab=58.24 E-value=0.42 Score=22.67 Aligned_cols=112 Identities=14% Similarity=0.091 Sum_probs=61.0 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CC-----CCCcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK-TP-----FLVTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lP-----L~~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||++|+.++.+.....-....|+.-|++|+..|-. |++ |+ -+..+..++.++.+. .=++..+-..-. T Consensus 2 a~A~~~Dv~~~w~r~lT~~E~~~v~~~L~~Ae~~Ir~----riP~L~~r~~a~~~~~~~v~~Vea~a-V~Rv~rNPeGy~ 76 (125) T protein:vir:10 2 AYANAQDVVTLWAKEPEPEVMELIERRLAQVERMIKR----RIPNLDLKVAADATFQADLIDIEADA-VLRLVRNPEGYI 76 (125) T ss_pred CcCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH----hCCChhhhhhcCCCccccHHHHHHHH-HHHHhcCCCccc Confidence 6999999999996433333567899999999998743 332 11 334566666665554 334543211111 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCC------CCCCccceeeecCCCcccC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDP------DVKLPAGFGTTTDGEQIFT 124 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~------~~~~~~g~~~~~~~~rvF~ 124 (130) + +-.-.|-..+ . .+.+.|++-|-. .+...+|.....|+--+=+ T Consensus 77 s----~T~G~Ys~~l-~--~~~~~g~L~it~~Ew~~Lg~~r~s~~~~i~p~~~~~~ 125 (125) T protein:vir:10 77 S----ETDGAYTYQL-Q--TDLSQGRLTILDDEWTTLGVNRLSRMSVIAPNIVMPT 125 (125) T ss_pred c----cccchhHHhh-h--cccccCceeeCHHHHHhhccccccceeeeecccccCC Confidence 1 1224555544 2 356778887632 2222344444444433323 No 58 >protein:vir:98900 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:3882 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164420;genbank:gi:56694910;genbank:GeneID:3197290 Probab=57.95 E-value=0.41 Score=22.73 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=64.8 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CCC----cchHHHHHHHHHHHHhhhcCCccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FLV----TPPIIHDIAVDLARFFFAEDAYTSQK 75 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~~----vP~~L~~~a~dIArY~L~~~~~~~~~ 75 (130) =|+|.+......| ..++++..++.+..|+..||.+...||.-. |.. .+..++..+|.-+-|.- ...... T Consensus 2 ~Y~t~~~Y~~~~G---~~i~e~~F~~l~~rAs~~ID~iT~~ri~~~~~~~d~~~~~~~vk~A~c~qiey~~-~~G~~s-- 75 (132) T protein:vir:98 2 PYLTYEEFMDLNG---RDIDDKKFEKLLPKASAIIDGVTGHFYQKVDMEKDNAWRVNQFKLALCAQIEYFD-ALGATT-- 75 (132) T ss_pred CCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhcccccCCCccccChHHHHHHHHHHHHHHHHHH-hccchh-- Confidence 6999999976333 357788899999999999999999998632 333 33557778887776643 211110 Q ss_pred cchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecC-------------CCcccCCCCCCC Q lcl|NC_020479. 76 PNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTD-------------GEQIFTLDRPEW 130 (130) Q Consensus 76 ~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~-------------~~rvF~R~~~~w 130 (130) ++..- .=+..+.-|+.++....... +.+.... ..-+-=|.=..| T Consensus 76 ---------ae~~~-~~~~S~svG~~Svs~~s~~~-~~~~~~~~~~~~~~a~~~L~~tGLLyrGV~~~ 132 (132) T protein:vir:98 76 ---------FEEIN-NSPQTFQAGRTSVSNASRYN-PSGANESKPLVAEDVYIYLQGTGLLFQGVKTW 132 (132) T ss_pred ---------hhhcc-CccceeeeCcEEEEeeccCC-cccccccccchHHHHHHHHhhcCCccccCCCC Confidence 10000 11445677777775421111 1111000 112344555666 No 59 >protein:vir:1887 Length: 108 # NCBI annotation: gp6 # Family: family:all:6764 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037667;genbank:gi:9634125;genbank:GeneID:1262472 Probab=56.65 E-value=0.45 Score=22.48 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=55.4 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhh-ccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVA-YKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~R-Y~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) +++|.+++..--.- +..-|++.|+.-|.-|.+.|-.|+... |..| ..+|..++. |+=+-.=++|.+|-........ T Consensus 7 ~~vtLee~K~hLRi-d~dddD~lI~~~i~AA~~~v~~~~~~~~~~~~-~~~p~~ik~-AiLllv~~~YenRE~~~~~~~~ 83 (108) T protein:vir:18 7 DVISLSLFKQQIEF-EEDDRDELITLYAQAAFDYCMRWCDEPAWKVA-ADIPAAVKG-AVLLVFADMFEHRTAQSEVQLY 83 (108) T ss_pred cccCHHHHHHHcCC-CCCcchHHHHHHHHHHHHHHHHHhCCcccccc-cccchHHHH-HHHHHHHHHHhcccccccchhh Confidence 89999999875442 355689999999999999999999654 4444 346666664 4444455567766322111111 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCCCCCccce Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPDVKLPAGF 113 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~ 113 (130) . ....+.-+. -.+ -=.|| + ..+.|+ T Consensus 84 ~-~~~~~~LL~-pYR-~~~g~-----~-~~~~~~ 108 (108) T protein:vir:18 84 E-NAAAERMMF-IHR-NWRGK-----A-ESEEGS 108 (108) T ss_pred h-hHHHHHHHH-HHH-hcCCC-----C-CcccCC Confidence 1 112221111 011 11222 2 223333 No 60 >protein:vir:192 Length: 108 # NCBI annotation: Gp6 # Family: family:all:6764 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037702;genbank:gi:9634167;genbank:GeneID:1262532 Probab=56.65 E-value=0.45 Score=22.48 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=55.4 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhh-ccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVA-YKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~R-Y~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) +++|.+++..--.- +..-|++.|+.-|.-|.+.|-.|+... |..| ..+|..++. |+=+-.=++|.+|-........ T Consensus 7 ~~vtLee~K~hLRi-d~dddD~lI~~~i~AA~~~v~~~~~~~~~~~~-~~~p~~ik~-AiLllv~~~YenRE~~~~~~~~ 83 (108) T protein:vir:19 7 DVISLSLFKQQIEF-EEDDRDELITLYAQAAFDYCMRWCDEPAWKVA-ADIPAAVKG-AVLLVFADMFEHRTAQSEVQLY 83 (108) T ss_pred cccCHHHHHHHcCC-CCCcchHHHHHHHHHHHHHHHHHhCCcccccc-cccchHHHH-HHHHHHHHHHhcccccccchhh Confidence 89999999875442 355689999999999999999999654 4444 346666664 4444455567766322111111 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCCCCCccce Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPDVKLPAGF 113 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~ 113 (130) . ....+.-+. -.+ -=.|| + ..+.|+ T Consensus 84 ~-~~~~~~LL~-pYR-~~~g~-----~-~~~~~~ 108 (108) T protein:vir:19 84 E-NAAAERMMF-IHR-NWRGK-----A-ESEEGS 108 (108) T ss_pred h-hHHHHHHHH-HHH-hcCCC-----C-CcccCC Confidence 1 112221111 011 11222 2 223333 No 61 >protein:vir:1026 Length: 107 # NCBI annotation: Orf46 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076680;genbank:gi:13095789;genbank:GeneID:920344 Probab=55.86 E-value=0.47 Score=22.38 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=60.5 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CC---CcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FL---VTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~---~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=+|.+||.....--+ . |+..+..+|.-|.+.|-+.++....-| |. .+++...-.|..+|-.|-..+..+.. T Consensus 1 M~vtld~iK~sLriD~-d-Dd~~l~~~l~aA~~YIk~Aig~d~~~~~Fy~~e~~~~lfd~Avl~La~~~Y~nR~at~~-- 76 (107) T protein:vir:10 1 MSVTVDDLLDQLSEDD-D-RKPQLQIYFDTATAYVKNAVSSDTVDAPFFNVENVSPIYDVAVLSYSMDLWINRSTTMP-- 76 (107) T ss_pred CeecHHHHHHHhcCCC-C-chHHHHHHHHHHHHHHhhhcCcccccCCccccccchhHHHHHHHHHHHHHhhcccceee-- Confidence 9999999988776543 3 899999999999999999999876543 43 58888888888888766433333321 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecC Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTD 118 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~ 118 (130) .+-... .-| .-|+..=...- +. .+|-+..+. T Consensus 77 -vp~~v~---siI-~QLRg~y~~~~----e~--~~~~~~~~~ 107 (107) T protein:vir:10 77 -PTTAVD---HMV-GQLRGLYSSWK----EA--QDGQNLQTE 107 (107) T ss_pred -cchHHH---HHH-HHHhhhhcccc----cc--cCCCcccCC Confidence 111111 222 22443211111 11 111111111 No 62 >protein:vir:2345 Length: 125 # NCBI annotation: gp15 # Family: family:all:2817 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075282;genbank:gi:12657869;genbank:GeneID:920134 Probab=55.44 E-value=0.48 Score=22.33 Aligned_cols=112 Identities=14% Similarity=0.031 Sum_probs=62.9 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CC-----CCCcchHHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK-TP-----FLVTPPIIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lP-----L~~vP~~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|||.+|.+++.+.....-....|+.-|++|+..|= .|++ |+ -+.-+..++.++++..+= +..+ + +. T Consensus 3 ~~A~~eDV~a~w~R~lt~eE~~~V~~~L~~ae~~ir----rriPdL~~r~~~~~~~~~~v~~V~a~~V~R-v~rn-P-eG 75 (125) T protein:vir:23 3 TLATHEDVTAFWARTPTAEEIVLINRRLAQAERMLL----RAIPELLIKASSDPVFRAEVIDIEAEAVLR-LVRN-H-EG 75 (125) T ss_pred cccCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----HhcCChhhhhcCCCcchhhHHHHHHHHHHH-HhcC-C-CC Confidence 699999999999643222356789999999999885 4443 21 334567778877765443 4332 2 11 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCC-----CCCCccceeeecCCCcccC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDP-----DVKLPAGFGTTTDGEQIFT 124 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~-----~~~~~~g~~~~~~~~rvF~ 124 (130) - +.+-...|-..+ . .+++.|++-|-. .....+|.....|....=+ T Consensus 76 y--~seT~g~Yt~~l-~--~~~~~g~L~it~~E~a~Lg~~~s~~~vi~p~~~~p~ 125 (125) T protein:vir:23 76 Y--LSETDGNYTYML-Q--AQDPNRKLEILPEEWEVLGIVRSGLGILVPTVVLPS 125 (125) T ss_pred c--cccccchhhhhh-h--ccCCCCceeecHHHHHhhccccccceEEeeceecCC Confidence 1 112224565544 2 257788877632 1222345444444433323 No 63 >protein:vir:107756 Length: 147 # NCBI annotation: gp21 # Family: family:all:664 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024869;genbank:gi:48697511;genbank:GeneID:2948377 Probab=53.81 E-value=0.32 Score=23.33 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=48.6 Q ss_pred CCCC--HHHHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYAT--PDDLRLVMNNLSK--QVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT--~~Dl~~~~ge~~~--~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=+| +++++.+|+|-.. .++++.|+..+++|...++.. |+...+ =.....+...-++-++|.. T Consensus 1 m~v~fd~~~Fr~~fPeFad~~~~pd~~i~~~l~~A~~~l~~~---~~~~~~--~g~~~~~~l~Ll~AHll~l-------- 67 (147) T protein:vir:10 1 MDHTLDITKFRALFPEFNNDVKYPDALLEQWYAVAGEYLGLT---DYACGL--NGNTLDLALMQLTAHLMKS-------- 67 (147) T ss_pred CceecCHHHHHHhcccccCCccCCHHHHHHHHHHHHHhhccc---cCCccc--ChhhHHHHHHHHHHHHHHH-------- Confidence 6555 9999999999653 589999999999998866532 232111 0122222222222222321 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) ...++.|.-.-|.-.+...|.++.+=+..-....+--| T Consensus 68 ----------------~~~~~~g~g~~G~v~Sas~G~VSVSy~~~~~~~~~~~w 105 (147) T protein:vir:10 68 ----------------ATILSSNKGAPMVMTSATIDKVSISTLAPPIKNGWQYW 105 (147) T ss_pred ----------------HHhhccCCCcccceeeeeecceeeeeecCCCCCcchhh Confidence 12233443333332222233333222222222333445 No 64 >protein:vir:5256 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:664 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852761;genbank:gi:31544036;uniprot:Q7Y5T9;genbank:GeneID:2753553 Probab=51.02 E-value=0.59 Score=21.83 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=46.7 Q ss_pred CCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchhhH Q lcl|NC_020479. 2 YATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLDEY 81 (130) Q Consensus 2 YaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~~~ 81 (130) -.|.++++.+|.|-.. ++++.|+..|++|...++. .|+ .....+...-++-++|..+... T Consensus 1 m~t~~~Fr~~~PeF~~-~pd~~i~~~l~~A~~~l~~---~~~-------g~~~~~~~~L~~AH~l~l~~~~--------- 60 (119) T protein:vir:52 1 MPLTEDFLLRYTEFGK-TDAKRIGLFLSDAQAEVSK---VQW-------GKLYDRGVMALTAHLLKLSADA--------- 60 (119) T ss_pred CCcHHHHHHhhhhccC-CCHHHHHHHHHHHHHhhCC---cCC-------chHHHHHHHHHHHHHHHhhhhh--------- Confidence 6899999999998765 7899999999999998872 343 1222222222333333211100 Q ss_pred HHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcccCCCCCCC Q lcl|NC_020479. 82 YIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIFTLDRPEW 130 (130) Q Consensus 82 ~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF~R~~~~w 130 (130) . ...|.. -|...+...|.++.+=+..-.+....-| T Consensus 61 ------------~-~~~g~~-~g~v~S~s~G~vSvS~~~~~~~~~~~~w 95 (119) T protein:vir:52 61 ------------E-ISGGAA-NRNLASESAGELSVSYTAPISANGSDDF 95 (119) T ss_pred ------------h-cccccc-ccceeeeeecceeeeeeccccCCcchhh Confidence 0 111111 1222222223332221222223344445 No 65 >protein:vir:93592 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:1879 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449297;genbank:gi:157166045;uniprot:Q6H9U4;genbank:GeneID:5580414 Probab=50.11 E-value=0.62 Score=21.73 Aligned_cols=96 Identities=13% Similarity=0.158 Sum_probs=50.2 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhh-ccCC------C-CCcchHHHHHHHHHHHHhhhcCCcc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVA-YKTP------F-LVTPPIIHDIAVDLARFFFAEDAYT 72 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~R-Y~lP------L-~~vP~~L~~~a~dIArY~L~~~~~~ 72 (130) |++|.++++.--.= .+.-|++.|+..|.-|++.|-+||... +..+ . .++|..++..++-++ =++|.+|-. T Consensus 3 ~~vtLeevK~hLRI-d~d~dD~li~~~i~aA~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~i~~AvLlLv-~~~YenRe~ 80 (108) T protein:vir:93 3 ALLTLEEIKAHLRV-DHDADDDMLMDKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRMKGAAMRLT-GMLYRNPDL 80 (108) T ss_pred cCCCHHHHHHHcCC-CCCcChHHHHHHHHHHHHHHHHHhccccccccccccccccccCChHHHHHHHHHH-HHHHhcccc Confidence 99999999875442 234589999999999999999999543 2221 1 134555555555444 445666532 Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHHhCCeee Q lcl|NC_020479. 73 SQKPN--LDEYYIKMKERIDKLINDILSGVLI 102 (130) Q Consensus 73 ~~~~~--~~~~~~~y~~ai~k~L~~Ia~G~~~ 102 (130) ..... ..+.-...+. .|...++=.+- T Consensus 81 ~~~~~~~~~elP~~v~~----Ll~~~R~p~~~ 108 (108) T protein:vir:93 81 AEREELLQGELPFSVSV----LIYDLRCPTVL 108 (108) T ss_pred ccccccccccCCHHHHH----HHHHccccccC Confidence 21110 0011111111 11211111111 No 66 >protein:vir:4702 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061634;genbank:gi:9635721;genbank:GeneID:1263015 Probab=49.96 E-value=0.62 Score=21.71 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=54.1 Q ss_pred CCCCHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhc--cCCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLR--LVMNNLSKQVTDELLTKYIKEASNYIDARLGVAY--KTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~--~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY--~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||. +.+=.-...-|++.|+..|..|.+.|-.+++... .-++...|+.++..|+-++-+ +|.+|-..... T Consensus 1 M~vt~~dLeeiK~~LRID~d~DD~li~~~i~AA~~~I~~ai~~~~~~~~~~~~~~~~~~~AvllLv~~-~YeNR~a~~~~ 79 (113) T protein:vir:47 1 MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFHEIASAVTDEPSKYIDWFKSHPLFARAIYPLASY-YFENRIAYLDR 79 (113) T ss_pred CcccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHhhccccccccccccCCchHHHHHHHHHHHH-HHhhhhhcccc Confidence 999988873 3333335566899999999999999999996432 122334455555555554444 45555322211 Q ss_pred c-------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccce Q lcl|NC_020479. 77 N-------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGF 113 (130) Q Consensus 77 ~-------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~ 113 (130) . +..+-..|+....+|++. ....+.|. T Consensus 80 ~~~~vp~~v~sli~qlR~~y~~~~~~----------~~~~~~~~ 113 (113) T protein:vir:47 80 DLSLAPHMVLSTVHKLRGSFEQFLES----------ENDEESGT 113 (113) T ss_pred ccccccHHHHHHHHHHHHHHHHHhhh----------cCCCCCCC Confidence 1 222333333333334332 11112222 No 67 >protein:vir:9877 Length: 114 # NCBI annotation: hypothetical protein # Family: family:all:2716 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795639;genbank:gi:28876402;genbank:GeneID:1257933 Probab=45.53 E-value=0.77 Score=21.22 Aligned_cols=98 Identities=21% Similarity=0.360 Sum_probs=59.7 Q ss_pred CCCCH----HHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHH--HhhhcCC-ccc Q lcl|NC_020479. 1 MYATP----DDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLAR--FFFAEDA-YTS 73 (130) Q Consensus 1 MYaT~----~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIAr--Y~L~~~~-~~~ 73 (130) |=.|. +++..+.|-. ....++.++..|.+|+..|=.||+ ...+|..|.-+..++|. |+=-.++ .++ T Consensus 1 m~~~~~~~L~~vK~~Lgi~-d~~~D~lL~~ii~~~~~~i~~~l~------~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S 73 (114) T protein:vir:98 1 MDETKQAIIDRVRVRLADE-TSLKEELLEELTQTAIDRINLKVG------DVVFNPLFNSIAVDVVVKMYRRMYFEGIDT 73 (114) T ss_pred CchhHHHHHHHHHHHhCCC-CCchhhHHHHHHHHHHHHHHHhhC------ccccchHHHHHHHHHHHHHhcccCccccce Confidence 88874 4555555653 344468999999999999999996 36889988888777654 4332211 111 Q ss_pred cccc------hhhHHHHHHHHHHHHHHH---HhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 74 QKPN------LDEYYIKMKERIDKLIND---ILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 74 ~~~~------~~~~~~~y~~ai~k~L~~---Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .+.. .+..-+.|.+.|.+|++. ..+|++. |++ T Consensus 74 ~S~eG~S~tf~dndf~ey~~~l~~y~~~~~~~~~g~~v------------------~Fl 114 (114) T protein:vir:98 74 EKADTISTKFIENVLAEYGEELASYKKDRLAILNKKVV------------------RFL 114 (114) T ss_pred eeccceeeeeeccccchhHHHHHHHHhhhhhhhcCcee------------------ecC Confidence 1111 133456788888888873 3334321 111 No 68 >protein:vir:102158 Length: 99 # NCBI annotation: uncharacterized phage protein (possible DNA packaging) # Family: family:all:316 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699940;genbank:gi:110804046;genbank:GeneID:4206702 Probab=45.03 E-value=0.78 Score=21.16 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=51.4 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccc-cc-- Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQK-PN-- 77 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~-~~-- 77 (130) |..|.+++..--.= .+.-|++.|+.-|+-|.+.|.+|++.++ .+.++.++..++-++ =++|.+|-.... .. T Consensus 1 M~vtLee~K~~LRI-D~d~dD~lI~~~i~aA~~~i~~~~~~~~----~~~~~~~k~Avl~lv-~~~YenR~~~~~~~~~~ 74 (99) T protein:vir:10 1 MILSVDEVKNYLRV-DYDEDDILIQDLIESAEDYLYNATGKKF----TEKNKLAKRYCLALV-YDWYKDKGMNIRATKNT 74 (99) T ss_pred CcCCHHHHHHHcCC-CCCcchHHHHHHHHHHHHHHHHhhCCCC----CCCChHHHHHHHHHH-HHhHhcchhhhhhhhcc Confidence 99999999864332 3445889999999999999999997654 344555554444444 455665532111 10 Q ss_pred --hhhHHHHHHHHHHHHHHHHhCCee Q lcl|NC_020479. 78 --LDEYYIKMKERIDKLINDILSGVL 101 (130) Q Consensus 78 --~~~~~~~y~~ai~k~L~~Ia~G~~ 101 (130) .+++.--...-|. -|+......- T Consensus 75 ~~~~~lp~~v~sli~-qlr~~~~~~~ 99 (99) T protein:vir:10 75 TVSEKVKYTLQSILL-QLKFCKEEDT 99 (99) T ss_pred chhhhhhHHHHHHHH-HHhhccCCCC Confidence 0112222323222 1332111111 No 69 >protein:vir:4954 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049930;genbank:gi:9632901;genbank:GeneID:1262077 Probab=43.29 E-value=0.85 Score=20.97 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=54.4 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) |-.|.+++..--.= ...-|+..|+.-|.-|...|.++++...... ...+|+..+..++-++-+ +|.+|-+....... T Consensus 1 M~vtLeeiK~~LRI-D~dddD~li~~~i~aA~~yi~~aig~~~~~~~~~~~~~~~~~Avl~Lv~~-~YeNR~~~~~~~~~ 78 (104) T protein:vir:49 1 MSVSKTSIMQTLNL-DETDDTALIPAYIESAKQYIINAVGSDSKFYDLDSVRALFDTAVIALTSS-YFTYRVALTDTATY 78 (104) T ss_pred CcccHHHHHHHcCC-CCccchHHHHHHHHHHHHHHHHhhCCCCccccccCCChHHHHHHHHHHHH-HHhhchhccccccc Confidence 99999999864332 2334789999999999999999998654311 134565555544444444 45555332222223 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) ++..-...-|. -|+.-- . ....+++. T Consensus 79 ~vp~~v~sli~-qLr~~y----~--~~~e~~~~ 104 (104) T protein:vir:49 79 PVNLTLNSIIG-QLRGLY----A--TYSEERGD 104 (104) T ss_pred hhhHHHHHHHH-HHHHhh----h--hhhhccCC Confidence 33333333332 133110 0 00000000 No 70 >protein:vir:9928 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795690;genbank:gi:28876458;genbank:GeneID:1258013 Probab=41.16 E-value=0.94 Score=20.73 Aligned_cols=105 Identities=22% Similarity=0.248 Sum_probs=60.2 Q ss_pred CCCC--HHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhhhc-cCCCCCcchHHHHHHHHHHHHhhhcCCccccc- Q lcl|NC_020479. 1 MYAT--PDDLRLVMNNL-SKQVTDELLTKYIKEASNYIDARLGVAY-KTPFLVTPPIIHDIAVDLARFFFAEDAYTSQK- 75 (130) Q Consensus 1 MYaT--~~Dl~~~~ge~-~~~~d~~~v~~Al~dA~~eID~YL~~RY-~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~- 75 (130) |=-+ .+++..+.|=. .....++.++..|.+|+..|=.||+ +| ..-...+|..|..+.+++|..+.-. ...|.. T Consensus 1 md~~~~L~~vK~~lgI~~~D~~~D~lL~~~i~~a~~~i~~~l~-~~~~~~~~eiP~~l~~iv~evav~ryNR-~g~EG~~ 78 (118) T protein:vir:99 1 MGDKQLIDDIKLFIGISKGDGAQDELITLAIYESKERVLAKLN-EYSETEITKIPDRLRFIVRDVAIKRFNR-INSEGAV 78 (118) T ss_pred CchhhHHHHHHHHhCCCCCchhhHHHHHHHHHHHHHHHHHHhc-cccccchhhhhHHHHHHHHHHHHHHhcC-cCCcccc Confidence 6555 55666665532 2344567999999999999999995 44 2234578999999999998877632 222111 Q ss_pred ---cc-----hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeec Q lcl|NC_020479. 76 ---PN-----LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTT 117 (130) Q Consensus 76 ---~~-----~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~ 117 (130) .. -+..-..|++.|.+|++ ++.. ...|.+.+- T Consensus 79 S~SeeG~S~sf~~d~~ey~~~l~~~~~----~~~~------~~~g~v~Fi 118 (118) T protein:vir:99 79 EDSEEGKTFKWDSYLKEYESTLRSAAI----GKVY------SGKGVARFI 118 (118) T ss_pred eeecCCeeeeeccCchhHHHHHHHHhh----hccc------CcCcceeeC Confidence 00 01224457776666654 2211 111222111 No 71 >protein:vir:9412 Length: 110 # NCBI annotation: DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803390;genbank:gi:29028702;genbank:GeneID:1258139 Probab=39.34 E-value=1 Score=20.53 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=52.5 Q ss_pred CCCCHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLR--LVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK--TPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~--~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~--lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||. +.+=.-...-|++.|+..|..|.+.|-++++.... -++..-|+.++..+.-++ -++|.+|-..... T Consensus 1 m~vt~~dLeeiK~~LRID~d~DD~lI~~~i~AA~~~I~~ai~~~~~~~~~~~~~~~~~~~Avl~Lv-~~~YeNR~a~~~~ 79 (110) T protein:vir:94 1 MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFREIASAVTDKPSKYIDWFKSHPLFARAIYPLA-SYYFENRIAYLDR 79 (110) T ss_pred CeecHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhhhhcccccccccCCCCchHHHHHHHHHH-HHHHHhhhhcccc Confidence 999999983 33433456678999999999999999999976431 223333444444444433 3445555322221 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcc Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQI 122 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rv 122 (130) ...++---.+.-|. =|+ |.-.. ...+++ +.+ T Consensus 80 ~~~~vp~~v~sli~-qlR----~~y~~--~~~~e~--------~~~ 110 (110) T protein:vir:94 80 DLSLAPHMVLSTVH-KLR----GSFEQ--FLESEN--------DEI 110 (110) T ss_pred ccccccHHHHHHHH-HHH----hhhhh--hccccc--------ccC Confidence 22233333333222 122 11110 000000 001 No 72 >protein:vir:95774 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950592;genbank:gi:119953787;genbank:GeneID:5076844 Probab=38.65 E-value=1.1 Score=20.45 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=61.4 Q ss_pred CCCC-HHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHH--HH-hhhcCCccccc Q lcl|NC_020479. 1 MYAT-PDDLRLVMNN-LSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLA--RF-FFAEDAYTSQK 75 (130) Q Consensus 1 MYaT-~~Dl~~~~ge-~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIA--rY-~L~~~~~~~~~ 75 (130) |=-| .+++..+.|- .+....+..++..|.+|+..|=.||. +..+|..|..++.++| || ++..-..++.+ T Consensus 1 md~~~L~~vK~~LgI~~~D~~~D~lL~~ii~~a~~~i~~~l~------~~~iP~~L~~Iv~ev~vkryNR~g~EG~~S~S 74 (115) T protein:vir:95 1 MDTTQLEKIKRRLGIPADDDKEDKLLEDLVEDAETYFKLLTS------SAVVDSKYHFMIEAVVYKLYGRKGSEGVTSET 74 (115) T ss_pred CchhHHHHHHHHhCCCCCCchhhHHHHHHHHHHHHHHHHhcC------chhcchhHHHHHHHHHHHHhcCCCccccceee Confidence 7666 7788888874 34566678999999999999999985 4789999998887665 55 33222222111 Q ss_pred cc--------hhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCccc Q lcl|NC_020479. 76 PN--------LDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQIF 123 (130) Q Consensus 76 ~~--------~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rvF 123 (130) .. .+..-..|.+.|.+|++. .+.. ... +..|+| T Consensus 75 ~eG~S~tf~~nD~~f~eY~~~l~~~~~~-~~~~--------~~~------G~v~Fl 115 (115) T protein:vir:95 75 VDGYSVTYQEWDNLFKPYMAILNKDFGL-DGSV--------REK------GKVMFL 115 (115) T ss_pred cCceeeeccccccccchhHHHHHHHHhc-cCCc--------cCC------cceeeC Confidence 11 122244577878777651 1000 011 122333 No 73 >protein:vir:4602 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058447;genbank:gi:9635173;genbank:GeneID:1262723 Probab=38.41 E-value=1.1 Score=20.43 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=56.7 Q ss_pred CCCCHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLR--LVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK--TPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~--~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~--lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||. +.+=.-.+.-|++.|...|.-|.+.|-++++.... .|+...++.++..|+-++-+|-..+.++. .. T Consensus 1 M~~t~~dL~~iK~~lRID~d~DD~li~~yi~AA~~yI~~aig~~~~~~~~~~~~~~~~~~Avl~Lv~~~YeNR~a~~-~~ 79 (110) T protein:vir:46 1 MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFHEIASAVTDEPSKYIDWFKSHPLFARATYPLASYYFENRIAYL-DR 79 (110) T ss_pred CcccHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhccCCcccccCccCcchHHHHHHHHHHHHHHHhccccc-cc Confidence 999999984 33434456668999999999999999999975443 23445566667666666665543333322 11 Q ss_pred chhhHHHHHHHHHH-------HHHHHHhCCee Q lcl|NC_020479. 77 NLDEYYIKMKERID-------KLINDILSGVL 101 (130) Q Consensus 77 ~~~~~~~~y~~ai~-------k~L~~Ia~G~~ 101 (130) ...++---...-|. +|++ =.++++ T Consensus 80 ~~~~vp~~v~slI~qLRg~y~~~~e-~e~~~~ 110 (110) T protein:vir:46 80 DLSLAPHMVLSTVHKLRGSFEQFLE-SENDEI 110 (110) T ss_pred ccccccHHHHHHHHHHHHhHhHhhc-ccccCC Confidence 22223222222221 2222 122333 No 74 >protein:vir:9821 Length: 138 # NCBI annotation: hypothetical protein # Family: family:all:1399 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795583;genbank:gi:28876338;genbank:GeneID:1257921 Probab=37.90 E-value=0.33 Score=23.24 Aligned_cols=110 Identities=17% Similarity=0.074 Sum_probs=56.3 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcch-----HHHHHHHHHHHHhhhcCCcccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYK-TPFLVTPP-----IIHDIAVDLARFFFAEDAYTSQ 74 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~-lPL~~vP~-----~L~~~a~dIArY~L~~~~~~~~ 74 (130) =|.|.++....-++ +++-.++-|..|+..||.+..-+|. .-|...++ +=+.+|.+|......+ .+.. T Consensus 7 ~YlT~eey~~l~~~-----~~~dF~kllk~As~~ID~~t~~~y~~~d~e~d~~~r~~~vKkA~a~QIeY~~~~G--~ts~ 79 (138) T protein:vir:98 7 AFLTQKEFEDLGFD-----DVEDFEKMEKRASHAVNLYCRNRYDYKDLKKEIALVQKAVKRAIAYQIAYLNDSG--VMTA 79 (138) T ss_pred cccchHHHhccCCC-----ChhhHHHHHHHHHHHhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHcC--Ccch Confidence 49999988653333 3334999999999999999999995 23333322 2334667777655543 2211 Q ss_pred ccchhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCc-ccCCCCCCC Q lcl|NC_020479. 75 KPNLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQ-IFTLDRPEW 130 (130) Q Consensus 75 ~~~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~r-vF~R~~~~w 130 (130) .. + +-+..|.-|+.++-......+++.....+.+ -++-+...| T Consensus 80 -------~d--~----~~~~s~svGrTSiS~~~~~~~~s~~~~~~~~~~~s~~A~~~ 123 (138) T protein:vir:98 80 -------ED--K----QSFAGISLGRTSISYTVGHGQGSQQKTLADRFNLCLDAENE 123 (138) T ss_pred -------hh--c----cCcCceEeeeeEeecccccccccccccccccccccHHHHHH Confidence 00 1 2356677787766321111111111111111 122222223 No 75 >protein:vir:1384 Length: 92 # NCBI annotation: Gp7 protein # Family: family:all:316 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612836;genbank:gi:20065970;genbank:GeneID:935785 Probab=37.72 E-value=1.1 Score=20.35 Aligned_cols=91 Identities=9% Similarity=0.021 Sum_probs=51.3 Q ss_pred CCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCcc-ccccchhhH Q lcl|NC_020479. 3 ATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYT-SQKPNLDEY 81 (130) Q Consensus 3 aT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~-~~~~~~~~~ 81 (130) .|.+++..--.= ...-|++.|+..|+-|.+.|.++.+..+ ..|+.++ +|+-+-.-++|.+|-. .......++ T Consensus 1 vtLeevK~~LRI-D~ddDD~lI~~~i~aA~~~i~~~~~~~~-----~~~~~~~-~Avlllv~~~YenR~~~~~~~~~~~i 73 (92) T protein:vir:13 1 MDLRELKEYLRI-DFEEDDILLRSLLLAAEEYLYNAGIKRD-----YKKSLYS-LAIKILVKHWYDNRDCVVAGNVNNKL 73 (92) T ss_pred CCHHHHHHHcCC-CCCcchHHHHHHHHHHHHHHHhhccccc-----cchhHHH-HHHHHHHHHhHhccccccccchhhhh Confidence 899998764422 3446889999999999999999997544 3344444 5555555666776632 222222233 Q ss_pred HHHHHHHHHHHHHHHhCCeeecCCCCCCccc Q lcl|NC_020479. 82 YIKMKERIDKLINDILSGVLIIDPDVKLPAG 112 (130) Q Consensus 82 ~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g 112 (130) ..-.+.-|. -|+... ..+| T Consensus 74 p~~v~sll~-~lR~~~-----------~~~~ 92 (92) T protein:vir:13 74 EYSLNAILT-QLRYCG-----------DDNG 92 (92) T ss_pred hHHHHHHHH-Hhhhcc-----------CCCC Confidence 333333332 233111 1111 No 76 >protein:vir:99002 Length: 158 # NCBI annotation: gp31 # Family: family:all:32652 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655896;genbank:gi:109521468;genbank:GeneID:4157967 Probab=32.51 E-value=1.4 Score=19.75 Aligned_cols=126 Identities=10% Similarity=0.102 Sum_probs=61.0 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHH---HHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhc-CCcccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKY---IKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAE-DAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~A---l~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~-~~~~~~~~ 76 (130) -|+|.||+..+...-..+--..+..+| |++||++.-.+=+.+..+| +.+|..++.+|..-|+=.+-. ++.+.... T Consensus 3 alasvee~~trl~~~lp~~~~r~~a~a~~vLd~~S~~ar~~~gr~W~~~-~daP~~vr~ivL~aa~R~~~NP~g~~~~~~ 81 (158) T protein:vir:99 3 ALVSVEEFTTFLRVPLPEEGSEKYTQMEFLLTLASDWARELSCKPWLLP-ADAPVTARGIILAASRREWNNPKRVSYVVK 81 (158) T ss_pred ceeeHhhhhhhhcccCChhhhHHHHHHHHHHHHHHHHHHHhcCccCCCC-CcchhHHHHHHHHHHHHHHhcCCceEEeee Confidence 799999999988432111112344455 9999988766655556655 478999999999887654421 22111100 Q ss_pred c-----------hhhHHHHHHHHHHHHHHHHh---CCeeecCC---CCCCccceeeecCCC---cccCCCC----CCC Q lcl|NC_020479. 77 N-----------LDEYYIKMKERIDKLINDIL---SGVLIIDP---DVKLPAGFGTTTDGE---QIFTLDR----PEW 130 (130) Q Consensus 77 ~-----------~~~~~~~y~~ai~k~L~~Ia---~G~~~Lg~---~~~~~~g~~~~~~~~---rvF~R~~----~~w 130 (130) . .+-+-.+-+.+ .|++.. -|--+++. +.-..++-..+.++. ++|.-+. ..| T Consensus 82 G~~~~~~~~~g~~~~ffT~~E~~---~L~r~~~s~GG~~~~~ttR~d~~~~~~yv~v~~~GdpfP~~~~~d~g~g~~~ 156 (158) T protein:vir:99 82 GPQSATFMQSAYPPGFFTDAEEA---KLRSYGRSTGNWGVIETYRDDEEQLNGYLEVYPHGGLMPVYHPDDIGYGGSI 156 (158) T ss_pred cchhhhcccccCCCcccCHHHHH---HHHHhhcccCceeEEEeecCccccCCceecccCCCCcccccCccccCCCccc Confidence 0 00122222222 344442 23333322 111122333332222 3444333 233 No 77 >protein:vir:6243 Length: 122 # NCBI annotation: gp37 # Family: family:all:11657 # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813697;swissprot:trembl:q859c0;genbank:gi:29366757;uniprot:Q859C0;genbank:GeneID:1258898 Probab=30.31 E-value=1.6 Score=19.49 Aligned_cols=110 Identities=22% Similarity=0.222 Sum_probs=65.4 Q ss_pred CCCCHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccchh Q lcl|NC_020479. 1 MYATPDDLRLVMNNL-SKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPNLD 79 (130) Q Consensus 1 MYaT~~Dl~~~~ge~-~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~~~ 79 (130) -|+|.++|+..-|-. .....++.+..||+-.-+.+.-|++..+..-=.+.|.+++-...-+||-+... +.+ T Consensus 2 ayatieelralegiddaslfpdellsdaidfsvetvevycgqkwdtaenptpevirwcvrtlarqyvld--hvs------ 73 (122) T protein:vir:62 2 AYATIEELRALEGIDDASLFPDELLSDAIDFSVETVEVYCGQKWDTAENPTPEVIRWCVRTLARQYVLD--HVS------ 73 (122) T ss_pred ccchhhhhHhhccccccccchhhhhhhhhhhhhhhhhhhcCcccCCcCCCchHHHHHHHHHHHHHHHHH--Hhh------ Confidence 799999999876633 34566788999999999999999999999988888888776666788876642 111 Q ss_pred hHHHHHHHHHHHHHHHHhCCeeecCCC------CCCccceeee----cCCCcccC Q lcl|NC_020479. 80 EYYIKMKERIDKLINDILSGVLIIDPD------VKLPAGFGTT----TDGEQIFT 124 (130) Q Consensus 80 ~~~~~y~~ai~k~L~~Ia~G~~~Lg~~------~~~~~g~~~~----~~~~rvF~ 124 (130) .+-+| ++ + |+ --=|.+.|.-. ++-+..-+.. ..-.-+|- T Consensus 74 ripdr---al-q-lq-sefgsiqlaqaggtwrptslpevnaklnlyrvrlpfifm 122 (122) T protein:vir:62 74 RIPDR---AL-Q-LQ-SEFGSIQLAQAGGTWRPTSLPEVNAKLNLYRVRLPFIFM 122 (122) T ss_pred hcchh---hh-h-hh-hcccceeeeccCCccccCcCcccccceeeeEeecceeeC Confidence 12222 12 1 22 23466666311 1111100000 00011233 No 78 >protein:vir:106583 Length: 105 # NCBI annotation: putative protein # Family: family:all:6481 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958586;genbank:gi:41179246;genbank:GeneID:2717119 Probab=25.99 E-value=2 Score=18.94 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=54.2 Q ss_pred CCCCHHHH---HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHHhhhcCCccccccc Q lcl|NC_020479. 1 MYATPDDL---RLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKPN 77 (130) Q Consensus 1 MYaT~~Dl---~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~~ 77 (130) |- --+.+ +.+..-..+..+++.+.-.|++|.+.|=+|+. | ..+|+.|..+++++|+.+.-. ..+|.... T Consensus 1 ~~-~~~~~~e~ik~L~~~~d~~~DelL~~lieda~~~vl~y~n-r-----~~ip~~l~~~v~evav~~fNR-~G~EG~tS 72 (105) T protein:vir:10 1 ML-NVDQLTEIVSALSTRLENVNNALLTELVKESIAQVLDYTG-Q-----KKLVGSMDIYVKKLAVINYNR-LGIEGETQ 72 (105) T ss_pred CC-chHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHcC-C-----cccchhHHHHHHHHHHHHhcc-cCCcccce Confidence 22 22222 33444456788899999999999999999984 3 477999999999988887632 22221110 Q ss_pred ----------hhhHHHHHHHHHHHHHHHHhCCee Q lcl|NC_020479. 78 ----------LDEYYIKMKERIDKLINDILSGVL 101 (130) Q Consensus 78 ----------~~~~~~~y~~ai~k~L~~Ia~G~~ 101 (130) ...+-+.|++.|.+| +.-.-|+. T Consensus 73 ~SegGvS~sy~~~~~~~~~~~l~~y-R~~~v~~~ 105 (105) T protein:vir:10 73 RSEGGITNYLETGIPKDIRQGLNSY-RIAKVKKL 105 (105) T ss_pred eecCCeeeeeeccCcHHHHHHHHHH-hhhcccCC Confidence 112334444444332 11222233 No 79 >protein:vir:98340 Length: 110 # NCBI annotation: DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918932;genbank:gi:119443694;genbank:GeneID:4594502 Probab=23.59 E-value=2.3 Score=18.61 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=52.8 Q ss_pred CCCCHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhc--cCCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLR--LVMNNLSKQVTDELLTKYIKEASNYIDARLGVAY--KTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~--~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY--~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||. +.+=.-...-|++.|...|..|.+.|-+.++..- .-++..-|+..+..+.-++-+ +|.+|-.-... T Consensus 1 m~vt~~dL~~iK~~lRID~d~DD~lI~~~i~aA~~yI~~aig~~~~~~~~~~~~~~~~~~Avl~Lv~~-~YeNR~a~~~~ 79 (110) T protein:vir:98 1 MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFHEIASAVTDEPSKYIDWFKSHPLFARAIYPLASY-YFENRIAYLDR 79 (110) T ss_pred CeecHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhhhccCcccccccCCCCchHHHHHHHHHHHH-HHHhhhhcccc Confidence 999999984 3343445667899999999999999999996541 122333345555555554444 44444322222 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcc Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQI 122 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rv 122 (130) ...++---...-|.+ |+ |.-.. ...+++ ..+ T Consensus 80 ~~~~vp~~v~slI~q-lR----~~y~~--~~~~e~--------~~~ 110 (110) T protein:vir:98 80 DLSLAPHMVLSTVHK-LR----GSFER--FLESEN--------DEI 110 (110) T ss_pred ccccccHHHHHHHHH-HH----hhhhh--hccccc--------ccC Confidence 222333233332221 22 11110 000000 001 No 80 >protein:vir:79990 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430004;genbank:gi:156604059;genbank:GeneID:5525450 Probab=23.59 E-value=2.3 Score=18.61 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=52.8 Q ss_pred CCCCHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhc--cCCCCCcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLR--LVMNNLSKQVTDELLTKYIKEASNYIDARLGVAY--KTPFLVTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~--~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY--~lPL~~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||. +.+=.-...-|++.|...|..|.+.|-+.++..- .-++..-|+..+..+.-++-+ +|.+|-.-... T Consensus 1 m~vt~~dL~~iK~~lRID~d~DD~lI~~~i~aA~~yI~~aig~~~~~~~~~~~~~~~~~~Avl~Lv~~-~YeNR~a~~~~ 79 (110) T protein:vir:79 1 MQLTAEELKLLKKHCKIDHNSEDDLLEIYYSWAFHEIASAVTDEPSKYIDWFKSHPLFARAIYPLASY-YFENRIAYLDR 79 (110) T ss_pred CeecHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhhhccCcccccccCCCCchHHHHHHHHHHHH-HHHhhhhcccc Confidence 999999984 3343445667899999999999999999996541 122333345555555554444 44444322222 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecCCCcc Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTDGEQI 122 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~~~rv 122 (130) ...++---...-|.+ |+ |.-.. ...+++ ..+ T Consensus 80 ~~~~vp~~v~slI~q-lR----~~y~~--~~~~e~--------~~~ 110 (110) T protein:vir:79 80 DLSLAPHMVLSTVHK-LR----GSFER--FLESEN--------DEI 110 (110) T ss_pred ccccccHHHHHHHHH-HH----hhhhh--hccccc--------ccC Confidence 222333233332221 22 11110 000000 001 No 81 >protein:vir:3992 Length: 107 # NCBI annotation: unknown # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116500;genbank:gi:14251133;genbank:GeneID:921311 Probab=22.58 E-value=2.4 Score=18.47 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=54.6 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CC---CcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FL---VTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~---~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=.|.+||......-+ . |++.+..+|.-|.+.|-+.++.....| |- .+-+...-.|.-+|-.|-..+..+. + T Consensus 1 M~Vtld~iK~sLriD~-d-Dd~li~~yl~aA~~YIk~Avg~d~~~~~Fy~~~~~~~lf~~Avl~La~~~Y~nR~at~--~ 76 (107) T protein:vir:39 1 MTVTVDDLLDQLSEDD-D-RKPQLQIYFDTAKAYVKNAVSSDTVDAPFFSVENVYPIYDVAVLSYSMDLWINRSTTM--P 76 (107) T ss_pred CeecHHHHHHHhcCCC-C-hhHHHHHHHHHHHHHHhhccCCcccCCCccccccchhHHHHHHHHHHHHHHHhccccc--c Confidence 9999999998776543 2 899999999999999999999988765 43 2334455555555544432222222 1 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecC Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTD 118 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~ 118 (130) .+-....+ | .-|+.. -.. -....+|-+.... T Consensus 77 -v~~~v~si---I-~QLRg~----y~~--~~e~~~~~~~~~~ 107 (107) T protein:vir:39 77 -PTTAVDHM---V-GQLRGL----YSS--WKEAQDGQNLQTE 107 (107) T ss_pred -cchhHHHH---H-HHHHHh----HHH--HhhccCCCcccCC Confidence 11111111 1 123321 000 0001111111111 No 82 >protein:vir:7410 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839927;genbank:gi:30089897;genbank:GeneID:1260684 Probab=20.05 E-value=2.8 Score=18.10 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=58.5 Q ss_pred CCCCHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhhccCC-CC---CcchHHHHHHHHHHHHhhhcCCcccccc Q lcl|NC_020479. 1 MYATPDDLRLVMNNLSKQVTDELLTKYIKEASNYIDARLGVAYKTP-FL---VTPPIIHDIAVDLARFFFAEDAYTSQKP 76 (130) Q Consensus 1 MYaT~~Dl~~~~ge~~~~~d~~~v~~Al~dA~~eID~YL~~RY~lP-L~---~vP~~L~~~a~dIArY~L~~~~~~~~~~ 76 (130) |=+|.+++.....-- .. |+..|+..|.-|.+.|-+.++..+.-+ |. .+++..+..|+-+|-.|- .+|.... T Consensus 1 M~v~LdeiK~~LRID-dd-DD~ll~~~i~aAe~yI~~Aig~~~~~~~fy~~e~~~~l~~~Avl~La~~wY-eNR~at~-- 75 (107) T protein:vir:74 1 MSVTVDDLLDQLSED-DD-RKPQLQIYFDTATAYVKNAVSSDTVDAPFFNVENVSPIYDVAVLSYSMDLW-INRSTTM-- 75 (107) T ss_pred CeecHHHHHHHcCCC-CC-hhHHHHHHHHHHHHHHhhhcCCcccccccccccCcchHHHHHHHHHHHHHH-Hhccccc-- Confidence 999999998765443 23 889999999999999999999776532 32 467777777777776654 4443211 Q ss_pred chhhHHHHHHHHHHHHHHHHhCCeeecCCCCCCccceeeecC Q lcl|NC_020479. 77 NLDEYYIKMKERIDKLINDILSGVLIIDPDVKLPAGFGTTTD 118 (130) Q Consensus 77 ~~~~~~~~y~~ai~k~L~~Ia~G~~~Lg~~~~~~~g~~~~~~ 118 (130) ++.---..-|. -|+ |.-.. .....+|-+.++. T Consensus 76 ---~vp~~v~siI~-QLR----g~y~~--~~e~~~~~~~~~~ 107 (107) T protein:vir:74 76 ---PPTTAVDHMVG-QLR----GLYSS--WKEEQGGQNLQTE 107 (107) T ss_pred ---cccHHHHHHHH-HHh----hcccc--hhhhcCCCcccCC Confidence 12222222221 233 22111 1111111111111 Done!