Query lcl|NC_020082.1_cdsid_YP_007348928.1 [gene=G428_gp15] [protein=putative major capsid protein] [protein_id=YP_007348928.1] [location=9714..10778] Match_columns 354 No_of_seqs 146 out of 197 Neff 7.7 Searched_HMMs 1612 Date Thu Nov 7 17:32:58 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_15 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_15_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:5255 Length: 304 # 100.0 8.8E-91 5.5E-94 514.3 29.2 295 50-353 1-304 (304) 2 protein:vir:79642 Length: 329 100.0 3.4E-89 2.1E-92 505.6 31.4 322 14-354 1-326 (329) 3 protein:vir:104342 Length: 314 100.0 3.5E-89 2.2E-92 505.5 30.7 311 21-354 1-311 (314) 4 protein:vir:103285 Length: 296 100.0 1.3E-87 7.9E-91 497.0 30.7 292 45-354 1-293 (296) 5 protein:vir:107687 Length: 319 100.0 3.3E-87 2E-90 494.7 32.3 316 19-354 1-319 (319) 6 protein:vir:80068 Length: 301 100.0 1.5E-86 9.5E-90 491.1 30.5 294 45-354 1-301 (301) 7 protein:vir:94070 Length: 339 100.0 3.3E-85 2.1E-88 483.7 28.6 332 1-354 1-339 (339) 8 protein:vir:101557 Length: 336 100.0 1.4E-81 8.7E-85 463.9 27.1 327 5-354 1-336 (336) 9 protein:vir:78558 Length: 336 100.0 1.7E-81 1E-84 463.5 25.9 324 5-354 1-336 (336) 10 protein:vir:3643 Length: 336 # 100.0 2.5E-81 1.5E-84 462.5 26.3 327 5-354 1-336 (336) 11 protein:vir:106734 Length: 336 100.0 3.9E-81 2.4E-84 461.4 25.5 324 5-354 1-336 (336) 12 protein:vir:107732 Length: 379 100.0 1.1E-79 6.7E-83 453.5 28.3 328 1-354 19-379 (379) 13 protein:vir:99576 Length: 388 100.0 8.6E-78 5.3E-81 443.1 26.0 334 1-354 21-388 (388) 14 protein:vir:96079 Length: 382 100.0 1.3E-75 7.9E-79 431.2 26.7 336 1-354 19-382 (382) 15 protein:vir:105778 Length: 358 99.7 4.6E-21 2.9E-24 132.1 10.6 328 1-354 1-357 (358) 16 protein:vir:94673 Length: 419 99.0 3.4E-10 2.1E-13 72.5 19.3 318 1-354 79-415 (419) 17 protein:vir:9574 Length: 300 # 98.9 3.3E-10 2E-13 72.6 17.7 282 45-354 1-298 (300) 18 protein:vir:7855 Length: 497 # 98.9 7.5E-10 4.6E-13 70.6 17.6 331 1-354 87-491 (497) 19 protein:vir:101650 Length: 497 98.9 7.5E-10 4.6E-13 70.6 17.6 331 1-354 87-491 (497) 20 protein:vir:8187 Length: 311 # 98.9 1E-09 6.5E-13 69.8 18.2 287 37-354 1-308 (311) 21 protein:vir:99920 Length: 311 98.8 7.7E-10 4.7E-13 70.6 17.0 289 45-354 1-310 (311) 22 protein:vir:9759 Length: 303 # 98.8 3.2E-09 2E-12 67.1 19.7 285 45-354 1-301 (303) 23 protein:vir:10364 Length: 390 98.8 2.6E-09 1.6E-12 67.6 18.9 314 1-354 45-390 (390) 24 protein:vir:94142 Length: 304 98.8 2.6E-09 1.6E-12 67.6 18.8 284 35-354 1-303 (304) 25 protein:vir:105905 Length: 304 98.8 2.6E-09 1.6E-12 67.6 18.8 284 35-354 1-303 (304) 26 protein:vir:80684 Length: 315 98.8 1.6E-09 1E-12 68.7 17.4 289 45-354 1-304 (315) 27 protein:vir:7771 Length: 330 # 98.8 2.8E-09 1.7E-12 67.5 18.6 295 35-354 1-321 (330) 28 protein:vir:104256 Length: 458 98.8 1.1E-09 6.5E-13 69.8 15.9 321 1-354 118-456 (458) 29 protein:vir:41 Length: 299 # N 98.8 5.3E-09 3.3E-12 65.9 19.6 277 40-354 1-296 (299) 30 protein:vir:97053 Length: 390 98.8 4.1E-09 2.6E-12 66.5 18.8 314 1-354 45-390 (390) 31 protein:vir:1638 Length: 298 # 98.8 3.2E-09 2E-12 67.2 18.1 281 35-354 1-297 (298) 32 protein:vir:81227 Length: 413 98.7 4.3E-09 2.7E-12 66.4 17.1 319 1-354 72-408 (413) 33 protein:vir:104085 Length: 320 98.7 6.8E-09 4.2E-12 65.4 17.4 294 23-354 1-315 (320) 34 protein:vir:81070 Length: 390 98.7 6.3E-09 3.9E-12 65.5 17.1 314 1-354 45-390 (390) 35 protein:vir:1433 Length: 435 # 98.7 1.5E-08 9.5E-12 63.4 19.1 326 1-354 63-431 (435) 36 protein:vir:94771 Length: 298 98.7 1.1E-08 6.5E-12 64.3 17.9 280 45-354 1-297 (298) 37 protein:vir:95763 Length: 297 98.7 1.9E-08 1.2E-11 62.9 19.1 278 23-354 1-294 (297) 38 protein:vir:4339 Length: 395 # 98.6 1.3E-08 8.3E-12 63.7 18.0 313 1-354 52-393 (395) 39 protein:vir:2504 Length: 305 # 98.6 3E-08 1.9E-11 61.8 19.3 275 37-354 1-296 (305) 40 protein:vir:78223 Length: 333 98.6 1.6E-08 1E-11 63.3 17.5 303 23-354 1-330 (333) 41 protein:vir:96223 Length: 324 98.6 2.4E-08 1.5E-11 62.4 18.2 294 3-354 1-313 (324) 42 protein:vir:80376 Length: 435 98.6 2.2E-08 1.4E-11 62.6 18.0 326 1-354 64-431 (435) 43 protein:vir:191 Length: 385 # 98.6 4.9E-09 3E-12 66.2 14.1 313 1-354 48-382 (385) 44 protein:vir:1886 Length: 385 # 98.6 4.9E-09 3E-12 66.2 14.1 313 1-354 48-382 (385) 45 protein:vir:8420 Length: 477 # 98.6 1E-08 6.3E-12 64.4 15.1 331 1-354 93-469 (477) 46 protein:vir:4600 Length: 415 # 98.6 2E-08 1.2E-11 62.8 16.5 322 1-354 49-402 (415) 47 protein:vir:4700 Length: 415 # 98.6 2E-08 1.2E-11 62.8 16.5 322 1-354 49-402 (415) 48 protein:vir:97148 Length: 324 98.5 4.8E-08 3E-11 60.7 18.5 293 20-354 1-313 (324) 49 protein:vir:9309 Length: 324 # 98.5 7E-08 4.4E-11 59.8 18.7 294 11-354 1-313 (324) 50 protein:vir:4226 Length: 326 # 98.5 6.4E-08 4E-11 60.0 18.4 303 23-354 1-321 (326) 51 protein:vir:78523 Length: 338 98.5 1.3E-07 7.9E-11 58.4 19.8 302 23-354 1-333 (338) 52 protein:vir:103955 Length: 324 98.5 6.7E-08 4.2E-11 59.9 18.1 295 3-354 1-313 (324) 53 protein:vir:8102 Length: 543 # 98.5 4.4E-08 2.7E-11 60.9 17.1 318 1-354 197-540 (543) 54 protein:vir:100247 Length: 425 98.5 2.9E-08 1.8E-11 61.9 15.5 323 1-354 79-422 (425) 55 protein:vir:78830 Length: 324 98.5 1.6E-07 9.8E-11 57.9 19.1 290 20-354 1-313 (324) 56 protein:vir:96392 Length: 324 98.5 1.6E-07 9.8E-11 57.9 19.1 290 20-354 1-313 (324) 57 protein:vir:99749 Length: 324 98.4 1.4E-07 8.5E-11 58.2 18.6 291 20-354 1-313 (324) 58 protein:vir:9410 Length: 415 # 98.4 4E-08 2.5E-11 61.1 15.3 318 1-354 42-402 (415) 59 protein:vir:100135 Length: 418 98.4 7.9E-08 4.9E-11 59.5 16.5 313 1-354 75-413 (418) 60 protein:vir:2430 Length: 318 # 98.4 9.1E-08 5.6E-11 59.2 16.7 293 24-354 1-311 (318) 61 protein:vir:98339 Length: 415 98.4 9.1E-08 5.7E-11 59.2 16.6 319 1-354 42-402 (415) 62 protein:vir:79987 Length: 415 98.4 9.1E-08 5.7E-11 59.2 16.6 319 1-354 42-402 (415) 63 protein:vir:81100 Length: 415 98.4 9.1E-08 5.7E-11 59.2 16.6 319 1-354 42-402 (415) 64 protein:vir:108211 Length: 318 98.4 2E-08 1.2E-11 62.8 12.8 280 40-354 1-315 (318) 65 protein:vir:96762 Length: 632 98.4 9.1E-08 5.7E-11 59.2 16.4 305 1-354 286-631 (632) 66 protein:vir:4456 Length: 401 # 98.4 3.6E-08 2.3E-11 61.4 13.7 328 1-354 56-399 (401) 67 protein:vir:485 Length: 407 # 98.3 1.3E-07 7.8E-11 58.4 16.2 322 1-354 55-398 (407) 68 protein:vir:2344 Length: 397 # 98.3 1.9E-07 1.2E-10 57.4 16.8 288 23-354 1-304 (397) 69 protein:vir:5739 Length: 366 # 98.3 4.4E-07 2.7E-10 55.5 18.4 320 1-354 25-364 (366) 70 protein:vir:105038 Length: 428 98.2 8.1E-07 5E-10 54.0 18.3 327 1-354 51-426 (428) 71 protein:vir:102119 Length: 404 98.2 1.3E-07 8.1E-11 58.3 13.1 320 1-354 38-398 (404) 72 protein:vir:4856 Length: 293 # 98.1 1.2E-06 7.3E-10 53.1 17.0 272 36-354 1-279 (293) 73 protein:vir:93616 Length: 645 98.1 5E-06 3.1E-09 49.7 21.0 318 1-354 288-637 (645) 74 protein:vir:1328 Length: 392 # 98.0 3.2E-06 2E-09 50.7 18.0 315 1-354 45-389 (392) 75 protein:vir:101607 Length: 379 98.0 4.4E-06 2.7E-09 49.9 18.7 306 1-354 52-377 (379) 76 protein:vir:6212 Length: 434 # 98.0 6.4E-07 4E-10 54.5 14.0 322 1-354 82-427 (434) 77 protein:vir:9643 Length: 377 # 98.0 3.5E-06 2.2E-09 50.5 17.7 311 1-354 37-375 (377) 78 protein:vir:4197 Length: 314 # 98.0 5.6E-06 3.5E-09 49.4 18.7 297 23-354 1-311 (314) 79 protein:vir:102655 Length: 322 98.0 3.9E-06 2.4E-09 50.2 17.8 299 35-354 1-319 (322) 80 protein:vir:3991 Length: 404 # 98.0 9.4E-07 5.8E-10 53.6 14.1 313 1-354 54-391 (404) 81 protein:vir:1268 Length: 397 # 97.9 1.8E-06 1.1E-09 52.0 14.9 306 1-354 65-395 (397) 82 protein:vir:4953 Length: 397 # 97.9 2.3E-06 1.4E-09 51.5 14.9 312 1-354 51-383 (397) 83 protein:vir:1025 Length: 408 # 97.9 2.2E-06 1.3E-09 51.6 14.2 313 1-354 54-391 (408) 84 protein:vir:4830 Length: 397 # 97.8 4.5E-06 2.8E-09 49.9 14.6 307 1-354 51-383 (397) 85 protein:vir:6242 Length: 390 # 97.8 7.7E-06 4.8E-09 48.6 15.8 317 1-354 45-387 (390) 86 protein:vir:4092 Length: 390 # 97.8 1.1E-05 6.9E-09 47.7 16.6 311 1-354 38-366 (390) 87 protein:vir:107593 Length: 392 97.8 7.1E-06 4.4E-09 48.8 15.5 311 1-354 46-382 (392) 88 protein:vir:102873 Length: 392 97.8 7.1E-06 4.4E-09 48.8 15.5 311 1-354 46-382 (392) 89 protein:vir:102082 Length: 392 97.8 7.1E-06 4.4E-09 48.8 15.5 311 1-354 46-382 (392) 90 protein:vir:105004 Length: 392 97.8 7.1E-06 4.4E-09 48.8 15.5 311 1-354 46-382 (392) 91 protein:vir:98635 Length: 377 97.7 5E-06 3.1E-09 49.6 14.4 312 1-354 20-375 (377) 92 protein:vir:4159 Length: 315 # 97.7 1.5E-05 9.5E-09 47.0 16.9 302 3-353 1-315 (315) 93 protein:vir:78640 Length: 352 97.7 2.8E-06 1.8E-09 51.0 12.6 305 1-354 23-344 (352) 94 protein:vir:9820 Length: 272 # 97.7 2.9E-05 1.8E-08 45.5 19.7 263 37-354 1-267 (272) 95 protein:vir:3033 Length: 272 # 97.7 2.9E-05 1.8E-08 45.5 19.7 263 37-354 1-267 (272) 96 protein:vir:4997 Length: 397 # 97.7 6E-06 3.7E-09 49.2 14.1 307 1-354 51-383 (397) 97 protein:vir:3613 Length: 272 # 97.7 2.5E-05 1.6E-08 45.8 17.5 268 41-354 1-270 (272) 98 protein:vir:7409 Length: 408 # 97.7 4.8E-06 2.9E-09 49.8 13.5 313 1-354 54-391 (408) 99 protein:vir:81160 Length: 371 97.6 1.6E-05 9.7E-09 46.9 15.8 308 1-354 36-369 (371) 100 protein:vir:9509 Length: 381 # 97.5 5.4E-05 3.3E-08 44.0 18.7 308 1-354 1-366 (381) 101 protein:vir:101291 Length: 381 97.5 5.4E-05 3.3E-08 44.0 18.7 308 1-354 1-366 (381) 102 protein:vir:95963 Length: 395 97.5 6.5E-05 4E-08 43.6 17.2 307 1-354 23-374 (395) 103 protein:vir:80128 Length: 466 97.4 5.4E-05 3.4E-08 44.0 16.4 318 1-354 82-446 (466) 104 protein:vir:80930 Length: 278 97.4 7.4E-05 4.6E-08 43.2 18.7 272 35-354 1-275 (278) 105 protein:vir:4511 Length: 409 # 97.4 3.9E-05 2.4E-08 44.8 15.2 320 1-354 42-404 (409) 106 protein:vir:95376 Length: 425 97.2 0.00012 7.6E-08 42.0 17.8 314 1-354 68-419 (425) 107 protein:vir:100172 Length: 394 97.2 0.00012 7.4E-08 42.1 16.1 310 1-354 55-382 (394) 108 protein:vir:78350 Length: 383 97.1 0.00011 6.7E-08 42.3 15.0 308 1-354 38-373 (383) 109 protein:vir:100884 Length: 389 97.1 0.00017 1E-07 41.3 15.8 309 1-354 55-380 (389) 110 protein:vir:3845 Length: 395 # 97.1 0.00012 7.6E-08 42.0 15.0 309 1-354 48-381 (395) 111 protein:vir:3870 Length: 400 # 97.1 5E-05 3.1E-08 44.1 12.8 296 1-354 63-397 (400) 112 protein:vir:96123 Length: 274 97.1 0.00019 1.2E-07 41.0 18.6 263 37-354 1-268 (274) 113 protein:vir:93881 Length: 387 97.0 7.2E-05 4.5E-08 43.3 12.9 304 1-354 58-379 (387) 114 protein:vir:93742 Length: 274 96.9 0.00026 1.6E-07 40.2 20.2 265 41-354 1-268 (274) 115 protein:vir:9361 Length: 402 # 96.9 0.0001 6.4E-08 42.4 13.0 304 1-354 73-394 (402) 116 protein:vir:96978 Length: 387 96.7 0.0001 6.3E-08 42.5 11.5 304 1-354 58-379 (387) 117 protein:vir:94424 Length: 387 96.7 0.0001 6.3E-08 42.5 11.5 304 1-354 58-379 (387) 118 protein:vir:2685 Length: 387 # 96.7 0.0001 6.3E-08 42.5 11.5 304 1-354 58-379 (387) 119 protein:vir:94494 Length: 274 96.7 0.00042 2.6E-07 39.1 19.8 265 41-354 1-268 (274) 120 protein:vir:97433 Length: 274 96.7 0.00042 2.6E-07 39.1 19.8 265 41-354 1-268 (274) 121 protein:vir:100632 Length: 381 96.6 0.00044 2.7E-07 39.0 17.4 309 1-354 1-366 (381) 122 protein:vir:96833 Length: 275 96.5 0.00055 3.4E-07 38.5 18.0 266 35-354 1-269 (275) 123 protein:vir:8885 Length: 347 # 96.3 0.00081 5E-07 37.5 14.8 302 23-354 1-344 (347) 124 protein:vir:80213 Length: 334 96.3 0.00082 5.1E-07 37.5 14.7 296 23-354 1-330 (334) 125 protein:vir:105334 Length: 276 96.2 0.00088 5.5E-07 37.3 18.6 266 41-354 1-268 (276) 126 protein:vir:9704 Length: 394 # 96.1 0.00099 6.1E-07 37.1 13.9 301 1-354 51-388 (394) 127 protein:vir:94576 Length: 347 96.0 0.0012 7.4E-07 36.6 13.7 293 35-354 1-347 (347) 128 protein:vir:962 Length: 397 # 95.7 0.0012 7.6E-07 36.6 12.7 307 1-354 68-395 (397) 129 protein:vir:3158 Length: 321 # 95.7 0.0017 1E-06 35.8 18.1 292 1-354 1-310 (321) 130 protein:vir:96262 Length: 274 95.5 0.0019 1.2E-06 35.5 19.1 265 41-354 1-268 (274) 131 protein:vir:95898 Length: 274 95.5 0.0019 1.2E-06 35.5 19.1 265 41-354 1-268 (274) 132 protein:vir:739 Length: 231 # 95.2 0.0026 1.6E-06 34.7 16.5 228 84-354 1-229 (231) 133 protein:vir:1383 Length: 421 # 94.9 0.0032 2E-06 34.3 16.9 307 1-354 52-381 (421) 134 protein:vir:8843 Length: 317 # 94.9 0.0032 2E-06 34.3 16.3 284 40-354 1-314 (317) 135 protein:vir:1239 Length: 274 # 94.9 0.0032 2E-06 34.2 19.3 263 41-354 1-268 (274) 136 protein:vir:78739 Length: 332 94.4 0.0046 2.8E-06 33.4 12.9 299 23-354 1-332 (332) 137 protein:vir:95107 Length: 270 94.3 0.0047 2.9E-06 33.4 16.1 259 43-354 1-263 (270) 138 protein:vir:99888 Length: 309 94.3 0.0049 3E-06 33.2 15.0 268 40-354 1-295 (309) 139 protein:vir:97255 Length: 310 93.9 0.0059 3.6E-06 32.8 17.4 283 37-354 1-308 (310) 140 protein:vir:99675 Length: 324 93.6 0.007 4.4E-06 32.4 14.9 254 80-354 1-294 (324) 141 protein:vir:6324 Length: 335 # 92.3 0.012 7.3E-06 31.2 13.4 294 23-354 1-326 (335) 142 protein:vir:10450 Length: 344 92.2 0.012 7.7E-06 31.0 14.8 297 35-354 1-342 (344) 143 protein:vir:79078 Length: 307 91.5 0.015 9.6E-06 30.5 14.6 275 37-354 1-299 (307) 144 protein:vir:107882 Length: 307 91.1 0.017 1.1E-05 30.3 15.1 274 34-354 1-299 (307) 145 protein:vir:94711 Length: 347 90.8 0.019 1.2E-05 30.0 13.4 301 23-354 1-344 (347) 146 protein:vir:94622 Length: 341 90.2 0.022 1.4E-05 29.7 19.4 294 35-354 1-337 (341) 147 protein:vir:2201 Length: 345 # 90.2 0.022 1.4E-05 29.7 16.0 295 1-354 1-343 (345) 148 protein:vir:78935 Length: 335 89.5 0.026 1.6E-05 29.3 16.4 294 23-354 1-326 (335) 149 protein:vir:100057 Length: 375 89.1 0.028 1.7E-05 29.1 17.4 305 23-354 1-368 (375) 150 protein:vir:1541 Length: 347 # 87.5 0.038 2.4E-05 28.3 18.1 304 23-354 1-343 (347) 151 protein:vir:96666 Length: 462 87.4 0.039 2.4E-05 28.3 10.6 309 1-354 1-337 (462) 152 protein:vir:1084 Length: 437 # 86.1 0.048 3E-05 27.8 12.4 303 1-354 109-425 (437) 153 protein:vir:94933 Length: 330 78.8 0.11 6.9E-05 25.8 14.9 304 1-354 2-327 (330) 154 protein:vir:105645 Length: 400 78.0 0.12 7.4E-05 25.7 14.5 295 23-354 1-331 (400) 155 protein:vir:97397 Length: 517 78.0 0.12 7.4E-05 25.7 11.1 312 1-354 181-512 (517) 156 protein:vir:105822 Length: 273 76.7 0.13 8.2E-05 25.4 20.8 264 35-354 1-271 (273) 157 protein:vir:102605 Length: 273 76.7 0.13 8.2E-05 25.4 20.8 264 35-354 1-271 (273) 158 protein:vir:6378 Length: 346 # 76.4 0.14 8.4E-05 25.3 17.6 282 52-354 1-346 (346) 159 protein:vir:102823 Length: 470 74.0 0.16 0.0001 24.9 12.2 293 17-354 1-339 (470) 160 protein:vir:3364 Length: 347 # 73.7 0.17 0.0001 24.9 15.6 293 35-354 1-343 (347) 161 protein:vir:97031 Length: 402 72.7 0.18 0.00011 24.7 12.4 295 23-354 1-331 (402) 162 protein:vir:7990 Length: 273 # 68.1 0.24 0.00015 24.0 21.1 265 35-354 1-271 (273) 163 protein:vir:95603 Length: 463 67.4 0.25 0.00016 23.9 8.0 284 1-354 3-311 (463) 164 protein:vir:99311 Length: 463 67.4 0.25 0.00016 23.9 8.0 284 1-354 3-311 (463) 165 protein:vir:94800 Length: 319 65.5 0.28 0.00017 23.6 15.9 288 2-354 1-293 (319) 166 protein:vir:97331 Length: 319 65.5 0.28 0.00017 23.6 15.9 288 2-354 1-293 (319) 167 protein:vir:98480 Length: 348 62.7 0.33 0.0002 23.2 16.8 277 37-354 1-347 (348) 168 protein:vir:2736 Length: 348 # 60.2 0.38 0.00023 22.9 19.1 287 23-354 1-345 (348) 169 protein:vir:4902 Length: 348 # 58.9 0.4 0.00025 22.7 18.4 288 23-354 1-345 (348) 170 protein:vir:7019 Length: 401 # 56.4 0.46 0.00028 22.4 13.5 291 23-354 1-331 (401) 171 protein:vir:63741 Length: 468 53.2 0.53 0.00033 22.1 12.3 295 23-354 1-323 (468) 172 protein:vir:80491 Length: 467 39.1 1 0.00064 20.5 12.1 302 1-354 1-322 (467) 173 protein:vir:102335 Length: 312 38.5 1.1 0.00066 20.4 16.2 282 35-354 1-306 (312) 174 protein:vir:103323 Length: 364 28.5 1.7 0.0011 19.3 19.8 294 23-354 1-337 (364) 175 protein:vir:80835 Length: 464 24.2 2.2 0.0014 18.7 8.6 299 9-354 1-334 (464) 176 protein:vir:96490 Length: 348 21.5 2.6 0.0016 18.3 18.4 287 23-354 1-345 (348) No 1 >protein:vir:5255 Length: 304 # NCBI annotation: hypothetical protein # Family: family:all:463 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852760;genbank:gi:31544035;uniprot:Q7Y5U0;genbank:GeneID:2753552 Probab=100.00 E-value=8.8e-91 Score=514.29 Aligned_cols=295 Identities=17% Similarity=0.192 Sum_probs=278.4 Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCcee--EecCCCCccceeeeccceeEE Q lcl|NC_020082. 50 DGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGK--FIGANGQDLPRVAQSAQMHTV 127 (354) Q Consensus 50 ~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~--~~~~~~~dip~v~~~~~~~~~ 127 (354) =++++||++||++||++|||+++++++++++||+.++++||+++++|.+++.+|+++ +++++++|||+++++++++.. T Consensus 1 ~~~lafl~~qL~~id~~vye~~~~~~~~~~lipv~t~~~~~~~~~~~~~~d~~G~a~~~~i~~~a~dip~vd~~~~~~~~ 80 (304) T protein:vir:52 1 MSLLAYVKNGLTAVSKDIAETKYPEIVFPQFVYVDQQTAVGITEKLHYGADEHGSLDDGLITVGTSTLDQVEVGFTPTRS 80 (304) T ss_pred CchHHHHHHHHHHHhhhhhccccccchhhhhccccCCCCcccceEEEeeeeccCcccccccCCcCCccceeecccceeEE Confidence 467899999999999999999999999999999999999999999999999999999 999999999999999999999 Q ss_pred EEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCcccee-----cccccc Q lcl|NC_020082. 128 PLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSS-----ATKDYK 201 (354) Q Consensus 128 pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~-----~~~~w~ 201 (354) |++.|+.+|+|+++||++|++.|++|+++|+++|++++++++|+++|+|++. .|++||||+|+++..+ ++++|+ T Consensus 81 ~i~~~~~~~~y~~~El~~a~~~g~~l~~~ka~aa~~a~~~~~n~v~~~Gd~~~~g~~GllN~p~v~~~~~~~~~a~~~w~ 160 (304) T protein:vir:52 81 YIVPWAKSVTWTKPELEQGKLLGLALNTAKIMALNKNAQQTLQKVAFLGHAKDSRLTGLLNNKSVEVYAIKGAAQNTKVQ 160 (304) T ss_pred EEEEEeeeeeecHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhceEEEEeeccccceEEEEeCCCcceeeecCCccCCccc Confidence 9999999999999999999999999999999999999999999999999985 7999999999998543 346899 Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 202 TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 202 ~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) +||++||++||++++++++.+|+|++.|++|+|||+.|.+|++++++ ++++|+|+||++||++ .+|++|+|+.+++. T Consensus 161 ~~T~~eI~~di~~~~~~i~~~s~~~~~p~tl~Lpp~~~~~l~~~~~~-~~~~Tvl~~l~~n~~~--~~g~~l~I~~v~~~ 237 (304) T protein:vir:52 161 AMDFDKAVAFFKEIFLKGMEKTKRIEAPNTFAIDSLDLAHLALVQRA-NTDTTALEFLTKHLSA--AAGRQVAIKALPSN 237 (304) T ss_pred cCCHHHHHHHHHHHHHHHHhccCceecCceEEeCHHHHHHHhhccCC-CCCchHHHHHHHhccc--ccCCcceEEEeccc Confidence 99999999999999999999999999999999999999999987755 5889999999999986 47999999999874 Q ss_pred eeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCc-eeEEeeeeeeeeEEEECcceeeeeec Q lcl|NC_020082. 282 DAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASL-GITVPAEYKISGTEFRYPLCAAYVDM 353 (354) Q Consensus 282 ~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~-~~~~~~~~~~gGv~i~~P~ai~y~D~ 353 (354) .. ++|.+|+||||+|++|+++++|++||||+++|+|++++ .|++||++|+|||+||||.+++|+|+ T Consensus 238 ~~------~~g~~g~~r~vvY~~d~~~~~~~vP~p~~~l~~q~~~~~~~~vp~~~r~gGv~v~~P~a~~y~D~ 304 (304) T protein:vir:52 238 YG------TRVTDGKTRAMVYVNSKEHVIFDVPMSPTVLDAQPKGLLAFESGLRMAFGGVTFMEPDSALYVDY 304 (304) T ss_pred cc------ccCCCCceEEEEEecChhheEEecCccccccchhhcCCceEEecceeeeeeEEEEccceeeeecC Confidence 32 24667999999999999999999999999999999986 79999999999999999999999999 No 2 >protein:vir:79642 Length: 329 # NCBI annotation: HsbB # Family: family:all:463 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285525;genbank:gi:148734508;genbank:GeneID:5220000 Probab=100.00 E-value=3.4e-89 Score=505.59 Aligned_cols=322 Identities=19% Similarity=0.238 Sum_probs=293.4 Q ss_pred ccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceee Q lcl|NC_020082. 14 NQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADT 93 (354) Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~ 93 (354) --|.+-..-++| |+.....+||++ +-+..+.++++.++|+++||++||++|||++++++++++++|+.++++||+++ T Consensus 1 ~~~~~~~~~~~~--d~~~~~~~a~~~-~~~~~~~~~~~~~~f~~~ql~~id~~v~e~~~~~l~~~~~i~i~~~~~~~~~~ 77 (329) T protein:vir:79 1 MRGNIMSKEMKY--DEFEANVIANHM-QLRGAKNDASDMGIWTSQELHKIKAQAYEKEYPAGSALRVFPVTSELSDTDKT 77 (329) T ss_pred Cccchhhhhhcc--chhhhhhHhhhc-ccccceeccchhhHHHHHHHHHHHHHHHhhhhcccchhhhcccccCCCCceeE Confidence 334443344444 555554556655 44667888888999999999999999999999999999999999999999999 Q ss_pred EEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhhee Q lcl|NC_020082. 94 WMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVA 173 (354) Q Consensus 94 ~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~ 173 (354) ++|++++.+|++++|+++++|+|+++++++++.+|++.|+.+|+|+++||+++++.|+||+++|+.+|++++++++|+++ T Consensus 78 ~t~~~~~~~G~a~~~~d~~~dip~vd~~~~~~~~~i~~~~~~~~~~~~El~~a~~~g~~l~~~k~~aA~~~~~~~~n~i~ 157 (329) T protein:vir:79 78 FEYQTFDKVGHAKIIADYTDDLSTVDALMTSEFGKVFRLGNAFLISIDEIKAGQRTGKSLSTRKANAAQNAHDQLVNHLV 157 (329) T ss_pred EEeeeeecceeeeeecCcccccceeecccceeEEEEEEEEEEEEecHHHHHHHHHhCCChHHHHHHHHHHHHHHhhccEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeehhhCceeeeecCCccceec----cccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCC Q lcl|NC_020082. 174 YFGDSSRGMYGLFNNPNVTLSSA----TKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTG 249 (354) Q Consensus 174 f~G~~~~gi~GLlN~p~~~~~~~----~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~ 249 (354) |+|++++|++||||+||++.... +++|++||++||++||++++++++.+|+|++.|++|+|||+.|.+|+++. . T Consensus 158 f~G~~~~g~~GLlN~p~v~~~~~~~~~~~~w~~kt~~ei~~di~~~~~~l~~~s~g~~~p~~L~Lpp~~~~~L~~~~--~ 235 (329) T protein:vir:79 158 FKGSKPHKIISVFEHPNLTTINSAGWNNAAGTGKKPETAQDELEQAIEKIETLTNGQHRANMILIPPSMRKVLMVRM--P 235 (329) T ss_pred EeecccccceeeecCCCccccccCCCCCccccccCHHHHHHHHHHHHHHHHHhcCceecccEEEecHHHHHHhhccc--C Confidence 99999999999999999986543 34699999999999999999999999999999999999999999998754 3 Q ss_pred CCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCcee Q lcl|NC_020082. 250 YTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGI 329 (354) Q Consensus 250 ~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~ 329 (354) ++++|+++||++|| ++++|+.++||+++ |.+|+|||++|+++++++++++||||++||+|+++++| T Consensus 236 ~~~~tvl~~lk~~~-------~~l~I~~~~el~~a-------g~~g~~~~v~y~~~~~~~~~~vp~~~~~l~~q~~~~~~ 301 (329) T protein:vir:79 236 ETTMSYLDYFKQQN-------GGITIESISELEDI-------DGAGTKAALVYEKDPMNMSIEIPEAFNMLTAQPKDLHF 301 (329) T ss_pred CCCccHHHHHHHhC-------CCcEEEEccccccc-------CCCCceEEEEEecCCceEEEecCcceeeeeceecCceE Confidence 67899999999986 46889999998754 56789999999999999999999999999999999999 Q ss_pred EEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 330 TVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 330 ~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++||++|||||+||||.+|+|+|== T Consensus 302 ~v~~~~r~~Gv~i~~P~ai~~~dGI 326 (329) T protein:vir:79 302 KVPCTSKCTGLTIYRPLTLVLIKGL 326 (329) T ss_pred EEceeeeEEEEEEECcceeeeeeee Confidence 9999999999999999999999965 No 3 >protein:vir:104342 Length: 314 # NCBI annotation: hypothetical protein # Family: family:all:463 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398971;genbank:gi:81343955;genbank:GeneID:3778874 Probab=100.00 E-value=3.5e-89 Score=505.51 Aligned_cols=311 Identities=21% Similarity=0.262 Sum_probs=284.2 Q ss_pred CccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec Q lcl|NC_020082. 21 GYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD 100 (354) Q Consensus 21 ~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~ 100 (354) -+|+|..+... +|+.++. .-..++|++++|+++||++||++|||+++++++++++||+.++++||+++++|.+++ T Consensus 1 ~~~~~~~~~~~----~~~~~~~-~~~~~~d~~~~fl~~ql~~id~~v~e~~~~~~~~~~~i~v~~~~~~~~et~~~~~~e 75 (314) T protein:vir:10 1 MAIKFDAEQAK----ITTHLEQ-MGVEKADAAGIWAVSQLTAALNRAYEKEYAENSVVNIFPVTNEIPGHAKYFEYPEFD 75 (314) T ss_pred CccchHHHHHH----HHHHHHh-hcccchhhhHHHHHHHHHHHHHHHhhhhccccccceeeccccCCCCceeEEEeeeec Confidence 44555432222 2343221 113667889999999999999999999999999999999999999999999999999 Q ss_pred ccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh Q lcl|NC_020082. 101 GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR 180 (354) Q Consensus 101 ~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~ 180 (354) .+|++++|+++++|+|+++++++++.+|+++|+.+|+|+++||+++++.|+||+++|+.+|++++++++|+++|+|++++ T Consensus 76 ~~G~a~~~~d~~~dip~vd~~~~~~~~~i~~~~~~~~~~~~El~~a~~~g~~l~~~k~~aA~~~~~~~~n~i~f~G~~~~ 155 (314) T protein:vir:10 76 GVGIAQIIADYSDDLPLVDAFMTEKQGKVFRFGNAFLISTDEIKAGAATGQSLSARKQALAFEAHDNLLDKLVWSGSAPH 155 (314) T ss_pred cccceeeeCCcccccceeecccceeEEEEEEEEeeEEecHHHHHHHHHhCCChHHHHHHHHHHHHHHhhceEEEeecccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHH Q lcl|NC_020082. 181 GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFM 260 (354) Q Consensus 181 gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~ 260 (354) |++||||+||++..+++++|+ |++||++||++++++++++|+|.+.|++|+|||+.|.+|+++ ++++++|+|+||+ T Consensus 156 g~~GLlN~p~v~~~~~~~~Wa--T~~ei~~Di~~~~~~l~~~s~g~~~p~~l~Lpp~~~~~L~~~--~~~~~~tvl~~l~ 231 (314) T protein:vir:10 156 GIVSVFDQPNINNVVATPNWS--VPQNAIDDVTAMIDAVESSTQGLHHVTDILLPASARRVMQGL--VPQTNLSYGELFT 231 (314) T ss_pred cceeEeecCCCccccCCCCcc--cHHHHHHHHHHHHHHHHHhcCccccceeEEecHHHHHhhccc--ccCCCccHHHHHH Confidence 999999999999888888994 799999999999999999999999999999999999999754 3578999999999 Q ss_pred hcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeE Q lcl|NC_020082. 261 EANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGT 340 (354) Q Consensus 261 ~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv 340 (354) +|| ++|+|+.++||+++ |.+|++|||+|+++++++++++||||++||+|+++++|++||++||||| T Consensus 232 ~n~-------~~l~I~~~~el~~a-------g~~g~~~~v~y~~~~~~~~~~vp~~~~~l~~e~~~~~~~~~~~~r~~Gv 297 (314) T protein:vir:10 232 RNN-------PGLTIRFLQFLDNY-------DGAGGKAALAFEKSPLNMSIEIPEVTNVLPAQPKDLHFRYPVTSKATGL 297 (314) T ss_pred HhC-------CCcEEEEccccccc-------CCCcceEEEEEecCCcEEEEecCccceeecceecCceEEEcceeeeEEE Confidence 986 57899999999854 5568999999999999999999999999999999999999999999999 Q ss_pred EEECcceeeeeecC Q lcl|NC_020082. 341 EFRYPLCAAYVDMA 354 (354) Q Consensus 341 ~i~~P~ai~y~D~~ 354 (354) +||||.+|+|+|== T Consensus 298 ~i~~P~ai~~~dGI 311 (314) T protein:vir:10 298 IVYRPLTMAVIKGI 311 (314) T ss_pred EEECcceeEeeeee Confidence 99999999999844 No 4 >protein:vir:103285 Length: 296 # NCBI annotation: hypothetical protein # Family: family:all:463 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277465;genbank:gi:71834107;genbank:GeneID:3562396 Probab=100.00 E-value=1.3e-87 Score=496.98 Aligned_cols=292 Identities=20% Similarity=0.287 Sum_probs=276.9 Q ss_pred cccc-hhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccc Q lcl|NC_020082. 45 VMLD-ADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQ 123 (354) Q Consensus 45 ~~~d-A~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~ 123 (354) |++| ||++++|+++||++||++|+|++++++++|++||+.++++||+++++|++++.+|++++|+++++|+|+++++.+ T Consensus 1 ~~~~~a~~~~~f~~~ql~~id~~v~e~~~~~l~~~~~i~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~ 80 (296) T protein:vir:10 1 MGVDKADAAGIWTVKQLTASLNKAYETEYDQNSVVNLFPVSNEIPGYAKYFEYPVFDGVGIAQIVADYTDDLPLVDALAT 80 (296) T ss_pred CcccchhhhHHHHHHHHHHHHHHHHhhhhcccccceecccccCCCCceeEEEeeeeeccCceeEeCCCccccceeeccce Confidence 5555 688899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccccc Q lcl|NC_020082. 124 MHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTM 203 (354) Q Consensus 124 ~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~ 203 (354) ++.+|+++++.+|+|+++||+++++.|+||+++|+.+|++++++++|+++|+|++++|++||||+||++..+++++|+++ T Consensus 81 ~~~~~i~~~~~~~~~~~~El~~a~~~g~~l~~~ka~aA~~~~~~~~n~~~f~G~~~~g~~GLlN~p~v~~~~~~~~W~~~ 160 (296) T protein:vir:10 81 ERQGKVFRFGNAFLISIDEIKVGQATGQSLSTRKQSLAFEAHDKLLDKLVWSGSTAHGIPSVFDYPNINNVVSGGSWSQP 160 (296) T ss_pred eEEEEEEEEEeeeeecHHHHHHHHHhCCChHHHHHHHHHHHHHHhhceEEEeecccccceeEeecCCCccccccCCccCH Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888999874 Q ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeee Q lcl|NC_020082. 204 NGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDA 283 (354) Q Consensus 204 T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~ 283 (354) .+|++||++++++++.+|+|++.|++|+|||+.|.+|+++. +++++|+++||++|+ ++++|+.+++|+. T Consensus 161 --t~i~~Di~~~~~~l~~~s~g~~~p~~l~L~p~~~~~L~~~~--~~~~~t~l~~ik~~~-------~~l~i~~~~~l~~ 229 (296) T protein:vir:10 161 --TTAVSDITSLLDIIETSTNGQHRATHLLLPTTARRIMQNLV--PGTSVSYGEFFRQNN-------SGVTVEFVQYLND 229 (296) T ss_pred --HHHHHHHHHHHHHHHHhhCceecceeEEeCHHHHHHHhhcc--CCCCccHHHHHHHhc-------CCceEEEeeeecc Confidence 59999999999999999999999999999999999998653 578999999999986 4688999999975 Q ss_pred ccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 284 AELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 284 ~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) + +.+|+++||+|+++++++++++||||++||+|+++++|++||++++|||+||||.||+|+|== T Consensus 230 a-------~~~g~~~~v~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~~~~~~~~Gv~i~~P~ai~~~dGI 293 (296) T protein:vir:10 230 Y-------NGTGTSAAIAYEKDPNNMAIEIPEATNALPAQPKDLHFKIPVTSKATGLIVYRPLTMAVMKGI 293 (296) T ss_pred C-------CCCcceEEEEEEcCCceEEEEcCcceeeecccccCceEEEeeEeeEEEEEEECCceeEEEeee Confidence 4 456899999999999999999999999999999999999999999999999999999999743 No 5 >protein:vir:107687 Length: 319 # NCBI annotation: hypothetical protein # Family: family:all:463 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003898;genbank:gi:45686314;genbank:GeneID:2773027 Probab=100.00 E-value=3.3e-87 Score=494.70 Aligned_cols=316 Identities=20% Similarity=0.278 Sum_probs=283.6 Q ss_pred ecCccccccccchhhhhhhhhhcCCccccchh-hhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEe Q lcl|NC_020082. 19 HKGYVSRNGDQWVINNTALDAIGNPNVMLDAD-GGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYR 97 (354) Q Consensus 19 ~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~-~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~ 97 (354) -++ ++| +......+++.+. .-.+.-||. +.+.|+++||++||++++|++++++++|++||+.++++||+++++|. T Consensus 1 ~~~-~~~--~~~~~~~~~~~~~-~~~~~~da~~~~g~~~~~ql~~id~~v~e~~~~~l~~~~~i~v~~~~~~~~~~~~~~ 76 (319) T protein:vir:10 1 MTT-KKF--DEADKSNVEMYLI-QAGVKQDAAATMGIWTAQELHRIKSQSYEEDYPVGSALRVFPVTTELSPTDKTFEYM 76 (319) T ss_pred CCC-cch--hHHhhHHHHHHHh-hccchhhhhhhhhhHHHHHHHHHHHHHHhhhhcceechhhcccccCCCCceEEEEee Confidence 122 333 3333333444442 223445553 45689999999999999999999999999999999999999999999 Q ss_pred eecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeee Q lcl|NC_020082. 98 SYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGD 177 (354) Q Consensus 98 ~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~ 177 (354) +++.+|++++|+++++|+|+++++.+++.+|+++++.+|+|+++||++++++|+||+++|+.+|++++++++|+++|+|+ T Consensus 77 ~~~~~G~a~~~~d~~~dip~v~~~~~~~~~~i~~~~~~~~~~~~El~~a~~~g~~l~~~k~~aA~~~~~~~~n~i~f~G~ 156 (319) T protein:vir:10 77 TFDKVGTAQIIADYTDDLPLVDALGTSEFGKVFRLGNAYLISIDEIKAGQATGRPLSTRKASACQLAHDQLVNRLVFKGS 156 (319) T ss_pred eeccccceeeecCccccccceeccceeeEEEEEEEEeeeeecHHHHHHHHHhCCChHHHHHHHHHHHHHHhhceEEEeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred hhhCceeeeecCCccceeccc--cccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH Q lcl|NC_020082. 178 SSRGMYGLFNNPNVTLSSATK--DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV 255 (354) Q Consensus 178 ~~~gi~GLlN~p~~~~~~~~~--~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv 255 (354) +++|++||||+||++..++++ +|++||++||++||++++++++.+|+|+++|++|+|||+.|.+|++++ +++++|+ T Consensus 157 ~~~g~~GLlN~p~~~~~~~~~~~~~~t~t~~~i~~di~~~~~~l~~~s~g~~~p~~L~L~p~~~~~L~~~~--~~~~~t~ 234 (319) T protein:vir:10 157 APHKIVSVFNHPNITKITSGKWIDVSTMKPETAEAELTQAIETIETITRGQHRATNILIPPSMRKVLAIRM--PETTMSY 234 (319) T ss_pred ccccceeEEeCCCceeeecCCCCCccccCHHHHHHHHHHHHHHHHHhcCceeeceEEEecHHHHHhhhccc--CCCCeeH Confidence 999999999999998876653 467899999999999999999999999999999999999999998653 4689999 Q ss_pred HHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeee Q lcl|NC_020082. 256 MQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEY 335 (354) Q Consensus 256 l~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~ 335 (354) ++||++|+ ++++|+.+++|+.+ +.+|+||||+|+++++++++++||||++||+|+++++|++||++ T Consensus 235 l~~lk~~~-------~~l~I~~~pel~~a-------g~~g~~~~v~y~~~~~~~~~~v~~~~~~~~~e~~~l~~~~~~~~ 300 (319) T protein:vir:10 235 LDYFKSQN-------SGIEIDSIAELEDI-------DGAGTKGVLVYEKNPMNMSIEIPEAFNMLPAQPKDLHFKVPCTS 300 (319) T ss_pred HHHHHHhc-------CCceEEEeeeeccc-------CCCcceEEEEEecCCceEEEecCcceeeeeeeecCceEEEeeee Confidence 99999986 46889999999754 55689999999999999999999999999999999999999999 Q ss_pred eeeeEEEECcceeeeeecC Q lcl|NC_020082. 336 KISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 336 ~~gGv~i~~P~ai~y~D~~ 354 (354) |||||+||||.+|+|+|== T Consensus 301 r~~Gv~i~~P~ai~~~dGI 319 (319) T protein:vir:10 301 KCTGLTIYRPMTIVLITGV 319 (319) T ss_pred eeEEEEEEccceeEeeecC Confidence 9999999999999999966 No 6 >protein:vir:80068 Length: 301 # NCBI annotation: gp8 # Family: family:all:463 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468712;genbank:gi:157325292;genbank:GeneID:5601759 Probab=100.00 E-value=1.5e-86 Score=491.06 Aligned_cols=294 Identities=17% Similarity=0.261 Sum_probs=279.0 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |..| +.++|+++||++||++++|++++++.+|+++|+.++++||++++.|++++.+|++++++++++|+|++++++++ T Consensus 1 ~~~~--~~g~f~~~~l~~id~~v~e~~~~~l~~r~l~~v~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~dip~~~~~~~~ 78 (301) T protein:vir:80 1 MQGK--ITATIEARDLQAIDNVIYEPKQEELTARSVFPQKFDVNEGAESYSFDVMTRSGAAKIIANGADDLPLVDVDMVR 78 (301) T ss_pred CCcc--ccchhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCceEEEEEeeeccceeEEEecCccccccccccccee Confidence 3444 56789999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCcccee-------cc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSS-------AT 197 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~-------~~ 197 (354) +..|++.++.+|+|+++||++++++|+||+++|+.+|++++++++|+++|+|++++|++||||+||++... .. T Consensus 79 ~~~~i~~~~~~~~~~~~El~~a~~~g~~l~~~k~~aa~~~~~~~~n~~~f~G~~~~g~~GLlN~p~~~~~~~~~~~~~~~ 158 (301) T protein:vir:80 79 KSVPIYSIGIGLSYTIQDLRAARMQGTTVDAAKATTVRRAIAEKENSIAFRGEKKYAIKGAFEATGIQIDVSPTTGVGNV 158 (301) T ss_pred EEEEEEEEEeeeeecHHHHHHHHHhCCChHHHHHHHHHHHHHHhhceEEeeecccccceeeecCCCcccccccCcccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999986532 34 Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEe Q lcl|NC_020082. 198 KDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQI 277 (354) Q Consensus 198 ~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~ 277 (354) ++|++||++||++||++++++++++++|++.|++|+|||+.|.+|+++++++++++|+|+||++|+++ ++|+. T Consensus 159 ~~w~~~t~~ei~~di~~~~~~l~~~s~g~~~p~~L~L~p~~~~~L~~~~~~~~~~~tvl~~l~~~~~~-------~~I~~ 231 (301) T protein:vir:80 159 SKWEKKTAEQIIDEIGEAHTKITVLPGYGTASLKLCLPPKQFELINKKRYSNEDSRSVLKVLQDNAWF-------SAIVR 231 (301) T ss_pred cccccCCHHHHHHHHHHHHHHHHHhcCceecccEEEecHHHHHhhhhccccCCCCeeHHHHHHHHcCc-------ceEEE Confidence 68999999999999999999999999999999999999999999999999999999999999998765 78999 Q ss_pred eceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 278 RFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 278 ~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|+|+.+ |.+|++||++|+++++++++++||||++||+|+++++|++||++|+|||+||||.||+|+|== T Consensus 232 ~p~L~~~-------g~~g~~~~v~~~~~~d~~~~~v~~~~~~~~~e~~~~~~~~~~~~r~~Gv~i~~P~ai~~~~GI 301 (301) T protein:vir:80 232 VPDLAGM-------GTAGSDSFAVIHDSNETAELIIPMDITRHPEEYSFPRTKVPFEERTAGVVVRFPAAIVRVDGI 301 (301) T ss_pred cceeccC-------CCCcccEEEEEecCCcEEEEEecCceeeecceecCceeEeeeeeeeEEEEEEccceEEEEecC Confidence 9999754 556899999999999999999999999999999999999999999999999999999999966 No 7 >protein:vir:94070 Length: 339 # NCBI annotation: putative structural protein # Family: family:all:1653 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453625;genbank:gi:84662661;genbank:GeneID:5142580 Probab=100.00 E-value=3.3e-85 Score=483.74 Aligned_cols=332 Identities=14% Similarity=0.070 Sum_probs=298.3 Q ss_pred CcccccchHHhh--hccceeecCccccccccchhhhhhhhhhc-CCccccchhhhhHHHHHHHHHHHHHHHHhhhccccc Q lcl|NC_020082. 1 MAIKTIDAQTIQ--GNQWLVHKGYVSRNGDQWVINNTALDAIG-NPNVMLDADGGIAFYISQLAGIEATVYETPYGDITY 77 (354) Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~amda~~-~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~ 77 (354) |+|+ +|++.++ +++|++++|......+.... .+|||++. .+.+.+.+++++ .+++|++||++|||++++++++ T Consensus 1 ~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~a~d~~~~~~~~~~~~~~~i--~a~~~~~i~~~vy~~~~~~~~~ 76 (339) T protein:vir:94 1 MSIN-NDRTDIKQLEKVGIIFDGYSPKSISSEVS-AYAMDAVNLTPTLQTTANAGI--PAWMTTFVDRRVIDIQLAPMAA 76 (339) T ss_pred Ccee-chHHHHHHHHhhceeeccchhhhcchhhH-hhhccccccccccccccccch--hhhhhhhhchhheeecccccch Confidence 7775 6888887 78999999988886655554 57999975 344555556555 2457899999999999999999 Q ss_pred hhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHH Q lcl|NC_020082. 78 RSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQ 157 (354) Q Consensus 78 r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k 157 (354) +++||+.++++|++++++|+++|.+|++++|++++|+ |++++++++++++++.++.+|+|+++|+++|+++|++|+++| T Consensus 77 ~~l~pv~t~g~w~~~t~~y~~~e~~G~a~~ygd~ad~-Pl~~~~v~~~~~~v~~~~~g~~y~~~E~~~A~~~g~~l~~~K 155 (339) T protein:vir:94 77 AKIFPEVKKGDWTTTYGVFIIAEPVGQVATYSDWSAN-GMSKANVNFESRQNYRYQTWTEYGDLEMATYGEAGIDYVARQ 155 (339) T ss_pred hhhcccccCCCCcccEEEEeeeecccceEEcccccCC-CcccccceeeEEeEEEEEEEEeecHHHHHHHHhhCCChHHHH Confidence 9999999999999999999999999999999999876 999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc-eeccccccccCHHHHHHHHHHHHHHHHHHhCCcc---cccEEE Q lcl|NC_020082. 158 ARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL-SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH---VPNTAL 233 (354) Q Consensus 158 ~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~-~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~---~p~~L~ 233 (354) +.+|++++++++|+++|+|++++|++||||||+++. .+++++|++||++||++||++++++++.+|+|.+ .|++|+ T Consensus 156 a~aA~~al~~~~N~i~~~Gd~~~~~~GLlN~P~l~~~v~~s~~Wa~kT~~eI~~Di~~~~~~l~~~s~g~~~~~~~~~L~ 235 (339) T protein:vir:94 156 EISASLVMAKFANSSYLLGVAGIANYGLMNDPSLPAPVAATVNWATAAPEDIANDVVAMVGRLISQSGGLITGQERMVMA 235 (339) T ss_pred HHHHHHHHHHhhceEEeeeecccceEEEEeCCCccccccCCCCcccCCHHHHHHHHHHHHHHHHHhcCCeeeeccCcEEE Confidence 999999999999999999999999999999999965 5667899999999999999999999999999864 677999 Q ss_pred eCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEee Q lcl|NC_020082. 234 MFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMAN 313 (354) Q Consensus 234 l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~v 313 (354) |||+.|.+|+++ +.+++|+++||++|+ ++++|+.++||+.+ +.++..+|+.|.++++++++++ T Consensus 236 LP~~~~~~L~~~---n~~~~Tvl~~lk~n~-------pnl~i~~~~el~~a-------~g~~~~~~~~~~~~~~~~~~~~ 298 (339) T protein:vir:94 236 LAPSALNNVNRT---NNFGLSAGAKIAQTY-------PNIQFVAVPEFDTA-------SGRLVQLWVPEVNGQPTGEVAF 298 (339) T ss_pred ecHHHHHhcccC---CcCCccHHHHHHHhc-------CCcEEEEccccccC-------CCceEEEEEEeccCCcceEEEc Confidence 999999999865 457899999999984 45899999999743 2245667788888999999999 Q ss_pred ccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 314 PIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 314 p~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ||||++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 299 p~~~~~lpvq~~~~~~~v~~~~rt~Gv~i~~P~ai~~~~GI 339 (339) T protein:vir:94 299 AEKLRSHSIERYSTTTRQKHSGATFGAVIYQPWAVTQELGV 339 (339) T ss_pred chhhhccccEEcCceEEecceeeeeeEEEEccceeeeeecC Confidence 99999999999999999999999999999999999999866 No 8 >protein:vir:101557 Length: 336 # NCBI annotation: gp12 # Family: family:all:1653 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958117;genbank:gi:41057663;genbank:GeneID:2716814 Probab=100.00 E-value=1.4e-81 Score=463.85 Aligned_cols=327 Identities=13% Similarity=0.049 Sum_probs=291.2 Q ss_pred ccchHHhh--hccceeecCccccccccchhhhhhhhhhc-CCccccchhhhh-HHHHHHHHHHHHHHHHhhhccccchhh Q lcl|NC_020082. 5 TIDAQTIQ--GNQWLVHKGYVSRNGDQWVINNTALDAIG-NPNVMLDADGGI-AFYISQLAGIEATVYETPYGDITYRSD 80 (354) Q Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~amda~~-~~~~~~dA~~~~-~fl~~~L~~id~~v~e~~~~~l~~r~~ 80 (354) .=|+|.++ +++||+++++..+++.+... +||||+- +|.+.+.+++++ .||+ ++|||++|+++++++++.++ T Consensus 1 ~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~--~~~da~d~~~~~~~~~~~~i~~~l~---~~i~p~~~~~~~~p~~a~~l 75 (336) T protein:vir:10 1 MRDAQRIQNLARAGVILPRSVQNVSTPLTE--YAMDAADLSPHLSSTGSSGIPNYLT---TYVDPAVIDILVAPMKAAEL 75 (336) T ss_pred CchHHHHHHHhhcCeeecchhhhhhhhHHH--hhhhhhhccCccccCCCchhHHHHH---hhcccceeeehhhhhhhhhh Confidence 56999999 99999999999999888765 6787754 566666777766 6887 89999999999999999999 Q ss_pred ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHH Q lcl|NC_020082. 81 VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARL 160 (354) Q Consensus 81 v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~a 160 (354) +|+.+.++|.++++.|.++|.+|++++|+|++|+ |++|++++++++++++++.+|+|+++|+++|+++|++|+.+|+.+ T Consensus 76 ~pv~t~g~W~~~~~~~~~~e~~G~a~~ygd~~D~-P~~d~~~~~~~~~v~~~~~g~~yg~~El~~A~~~g~~l~~~Ka~a 154 (336) T protein:vir:10 76 VGESKKGDWTTLVAAFITAEPTTKVATYGDYSSD-GDSGANINYPQRQSYFFQTWTRWGERELEMAGAGRVDLASELNYS 154 (336) T ss_pred ccccccCCccceeEEEeeeeceeeEEEeeccCCC-ceeecccceeeeeEEEEEeeeeeCHHHHHHHHHhCCCcHHHHHHH Confidence 9999988888899999999999999999998765 999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhhheeeeeehhhCceeeeecCCccc--eeccccccccCHHHHHHHHHHHHHHHHHHhCCc---ccccEEEeC Q lcl|NC_020082. 161 AFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL--SSATKDYKTMNGQELFNMLNAPIFSVINLSRRF---HVPNTALMF 235 (354) Q Consensus 161 A~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~--~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~---~~p~~L~l~ 235 (354) |++++++++|+++|+|+++++++||||||+++. +.++++|.++|++||++||++++++|+.||+|. +.|++|+|| T Consensus 155 A~~ale~~~N~i~~~Gd~~~~~yGllN~P~l~a~~t~~t~~~~~~t~eei~~Di~~~~~~l~~qs~G~i~~~~~~tL~LP 234 (336) T protein:vir:10 155 SALGLAKFLNGSYLFGVAGLENYGLINDPSLSAPITATTPWSGSPAVEAVVNEVVALFQVLQTQSQGIITQEDVLRMGLP 234 (336) T ss_pred HHHHHHHhhCcEEEEeccccceEEEEeCCCCccccccCCCcccccCHHHHHHHHHHHHHHHHHhcCCeecccCcceEEec Confidence 999999999999999999999999999999974 334556788999999999999999999999986 779999999 Q ss_pred HHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeecc Q lcl|NC_020082. 236 PDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPI 315 (354) Q Consensus 236 p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~ 315 (354) |+.+.+|+++ +.+++|+++|||+|+ ++++|+.++||+++ +..+..+++-+..++++..+.+|+ T Consensus 235 ~~~~~~Ls~~---n~~g~Tvl~~lk~n~-------Pnl~i~t~pEl~~a-------~G~~~~l~~~~~~~~~t~~~~~p~ 297 (336) T protein:vir:10 235 PTAMSDLSKT---NQYGLAAAAKLKDIF-------PKLEFVTIPEYDTA-------SGRLVQLWAPRVEGKDTATCGFTE 297 (336) T ss_pred HHHHHhccCC---CccCccHHHHHHHhc-------CccEEEEccccccC-------CCceEEEEEEecCCCcceeeecch Confidence 9999999864 467899999999984 55789999998643 212333444445578899999999 Q ss_pred chhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 316 PFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 298 ~~~~l~vq~~~~~~~v~~~~rt~Gv~i~~P~ai~~~~GI 336 (336) T protein:vir:10 298 KMRAHSIERYSSYFRQKKSAGTWGAVIFRPFAVAQMIGV 336 (336) T ss_pred hhhccceeecCceeEeccccceeeeeeeccchheeeecC Confidence 999999999999999999999999999999999999866 No 9 >protein:vir:78558 Length: 336 # NCBI annotation: major capsid protein # Family: family:all:1653 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294848;genbank:gi:149882911;genbank:GeneID:5291029 Probab=100.00 E-value=1.7e-81 Score=463.46 Aligned_cols=324 Identities=13% Similarity=0.060 Sum_probs=290.0 Q ss_pred ccchHHhh--hccceeecCccccccccchhhhhhhhhhc-CCccccchhhhh-HHHHHHHHHHHHHHHHhhhccccchhh Q lcl|NC_020082. 5 TIDAQTIQ--GNQWLVHKGYVSRNGDQWVINNTALDAIG-NPNVMLDADGGI-AFYISQLAGIEATVYETPYGDITYRSD 80 (354) Q Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~amda~~-~~~~~~dA~~~~-~fl~~~L~~id~~v~e~~~~~l~~r~~ 80 (354) .=|+|.++ +++||++++...+..++... +||||+- .|.+.+.++.++ .||+ ++|||++||++++++++.++ T Consensus 1 ~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~--~a~da~d~~~~~~t~~~~g~~~~l~---~~i~p~~~~~~~~~~~~~~l 75 (336) T protein:vir:78 1 MRDAQRIQNLARAGVILPRSVKNVSTPLAE--YAMDAADLSPHLSSTGSSGIPNYLT---TYVDPSVIDILVAPMKAAEL 75 (336) T ss_pred CchHHHHHHHhccCeecchhhhhhhHHHHH--HHHhhhhhccccccCCCcchHHHHH---Hhcccceeeehhhhhhhhhh Confidence 56888888 89999999999988888764 6888765 455677777766 6887 89999999999999999999 Q ss_pred ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHH Q lcl|NC_020082. 81 VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARL 160 (354) Q Consensus 81 v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~a 160 (354) +|+.+.++|.+++++|.++|.+|++++|+|++|+ |++|++++++++++++++.+|+|+++|+++|+++|++|+.+|+.+ T Consensus 76 ~~v~t~g~W~~~~~~~~~~e~~G~a~~ygd~~D~-P~vd~~~~~~~~~v~~~~~g~~yg~~El~~A~~~g~~l~~~Ka~a 154 (336) T protein:vir:78 76 VGESKKGDWTTLVAAFITAEPTTTVATYGDYSSD-GDSGTNINYPQRQSYFFQTWTRWGERELEMAGAGRVDLASELNYS 154 (336) T ss_pred cccccCCCccccEEEEeeeecceeeEEeecccCC-CeeecceeeEEEEEEEEEeeeeecHHHHHHHHHhCCCcHHHHHHH Confidence 9999987777799999999999999999998765 999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhhheeeeeehhhCceeeeecCCccc--eeccccccccCHHHHHHHHHHHHHHHHHHhCCc---ccccEEEeC Q lcl|NC_020082. 161 AFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL--SSATKDYKTMNGQELFNMLNAPIFSVINLSRRF---HVPNTALMF 235 (354) Q Consensus 161 A~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~--~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~---~~p~~L~l~ 235 (354) |++++++++|+++|+|+++++++||||||+++. +.++++|++||++||++||++++++|+.+|+|. +.|++|+|| T Consensus 155 A~~ale~~~N~~~~~Gd~~~~~~GllN~P~l~a~~t~~~~~w~~~T~~~I~~Di~~~~~~l~~qt~g~~~~~~~~tL~Lp 234 (336) T protein:vir:78 155 SALGLAKFLNGSYLFGVAGLENYGLINDPSLSAPITATTPWSGSPAVEAVVNEVVTLFQVLQTQSQGIITQEAVLHMGLP 234 (336) T ss_pred HHHHHHHhhCeEEEEeccccceEEEEeCCCCCcccccCcCcccccCHHHHHHHHHHHHHHHHHhcCCeeeeccceEEEec Confidence 999999999999999999999999999999974 335667899999999999999999999999986 468899999 Q ss_pred HHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEE---EcCcceEEEe Q lcl|NC_020082. 236 PDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVY---DKSDRNLAMA 312 (354) Q Consensus 236 p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y---~~d~~~~~~~ 312 (354) |+.+.+|+++ +.+++|+++|||+|+ ++++|+.++||+++ |++++..| ..++++++++ T Consensus 235 ~~~~~~L~~~---n~~g~tv~~~lk~n~-------Pnl~i~t~pel~~A----------gg~~~~~~~~~~~~~~t~~~~ 294 (336) T protein:vir:78 235 PTAMSDLSKT---NQYGLSAAAKLKEIF-------PKLEFVTIPEYDTA----------SGRLVQLWAPRVEGKDTATCG 294 (336) T ss_pred hHHHHhccCC---CccCccHHHHHHHhc-------CccEEEEccccccc----------CcceEEEEEeeccCCcceeee Confidence 9999999865 567899999999984 45789999998643 22344555 4457899999 Q ss_pred eccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 313 NPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 313 vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|++|++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 295 ~p~~f~~lpvq~~~~~~~v~~~~rt~Gv~i~~P~ai~~~~GI 336 (336) T protein:vir:78 295 FTEKMRAHSIERYSSYFRQKKSAGTWGAVIFRPFAVAQMIGV 336 (336) T ss_pred cchhhhccceeecCceeEeccccceeeeeeeccchheeeccC Confidence 999999999999999999999999999999999999999866 No 10 >protein:vir:3643 Length: 336 # NCBI annotation: gp12 # Family: family:all:1653 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705638;genbank:gi:23752323;genbank:GeneID:955719 Probab=100.00 E-value=2.5e-81 Score=462.49 Aligned_cols=327 Identities=13% Similarity=0.050 Sum_probs=290.8 Q ss_pred ccchHHhh--hccceeecCccccccccchhhhhhhhhhc-CCccccchhhhh-HHHHHHHHHHHHHHHHhhhccccchhh Q lcl|NC_020082. 5 TIDAQTIQ--GNQWLVHKGYVSRNGDQWVINNTALDAIG-NPNVMLDADGGI-AFYISQLAGIEATVYETPYGDITYRSD 80 (354) Q Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~amda~~-~~~~~~dA~~~~-~fl~~~L~~id~~v~e~~~~~l~~r~~ 80 (354) .=|+|.++ +++||+++++..++..+... +||||+- +|.+.+.+++++ .||+ ++|||++||++++++++.++ T Consensus 1 ~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~--~~~da~d~~~~~~~~~~~~~~~~l~---~~i~p~~~~~~~~~~~~~~l 75 (336) T protein:vir:36 1 MRDAQRIQNLARAGVILPRSVQNVSTPLTE--YAMDAADLSPHLSSTGSSGIPNYLT---TYVDPSVIDILVAPMKAAEL 75 (336) T ss_pred CchHHHHHHHhhcCeeecchhhhhhhHHHH--hhhhhhhccCccccCCCcchHHHHH---HhhccceEeeecchhhhhhh Confidence 56999999 99999999999999888765 6777754 466666677766 6777 79999999999999999999 Q ss_pred ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHH Q lcl|NC_020082. 81 VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARL 160 (354) Q Consensus 81 v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~a 160 (354) +|+.+.++|.++++.|.++|.+|++++|+|++|+ |++|++++++++++++++.+|+|+++|+++|+++|++|..+|+.+ T Consensus 76 ~pv~t~g~W~~~~~~~~~~e~~G~a~~ygd~~D~-P~~d~~~~~~~~~v~~~~~g~~yg~~E~~~Aa~~~~~l~~~Ka~a 154 (336) T protein:vir:36 76 VGESKKGDWTTLVAAFITAEPTTKVATYGDYSSD-GDSGANINYPQRQSYFFQTWTRWGERELEMAGAGRVDLASELNYS 154 (336) T ss_pred ccccccCCccceeEEEeeeeceeeEEEeeccCCC-ceeecccceeeeeEEEEEeeeeeCHHHHHHHHHhCCCcHHHHHHH Confidence 9999988888899999999999999999998765 999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhhheeeeeehhhCceeeeecCCccc--eeccccccccCHHHHHHHHHHHHHHHHHHhCCc---ccccEEEeC Q lcl|NC_020082. 161 AFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL--SSATKDYKTMNGQELFNMLNAPIFSVINLSRRF---HVPNTALMF 235 (354) Q Consensus 161 A~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~--~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~---~~p~~L~l~ 235 (354) |++++++++|+++|+|+++++++||||||+++. +.++++|.++|++||++||++++++|+.+|+|. +.|++|+|| T Consensus 155 A~~ale~~~N~i~~~Gd~~~~~yGllNdP~l~a~~t~~t~~~~~~t~~ei~~Di~~~~~~l~~qt~G~i~~~~~~tL~LP 234 (336) T protein:vir:36 155 SALGLAKFLNGSYLFGVAGLENYGLINDPSLSAPITATTPWSGSPAVEAVVNEVVALFQVLQTQSQGIITQEDVLRMGLP 234 (336) T ss_pred HHHHHHHhhCcEEEEeccccceEEEEecCCCccccccCCCcccccCHHHHHHHHHHHHHHHHHhcCCeeeeccccEEEec Confidence 999999999999999999999999999999974 334556788999999999999999999999986 689999999 Q ss_pred HHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeecc Q lcl|NC_020082. 236 PDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPI 315 (354) Q Consensus 236 p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~ 315 (354) |+.+.+|+++ +.+++|+++|||+|+ ++++|+.++||+++ +..+..+++-+..++++.++.+|+ T Consensus 235 ~~~~~~Ls~~---n~~g~Tvl~~lk~n~-------Pnl~i~t~pEl~~a-------~g~~~~l~~~~~~~~~t~~~~~p~ 297 (336) T protein:vir:36 235 PTAMSDLSKT---NQYGLAAAAKLKDIF-------PKLEFVTIPEYDTA-------SGRLVQLWAPRVEGKDTATCGFTE 297 (336) T ss_pred hHHHHhccCC---CccCccHHHHHHHhc-------CccEEEEccccccC-------CCceEEEEEEecCCCcceeeecch Confidence 9999999864 467899999999984 45789999998643 212333444445578899999999 Q ss_pred chhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 316 PFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 298 ~~~~l~vq~~~~~~~v~~~~rt~Gv~i~~P~ai~~~~GI 336 (336) T protein:vir:36 298 KMRAHSIERYSSYFRQKKSAGTWGAVIFRPFAVAQMIGV 336 (336) T ss_pred hhhccceeecCceeEeccccceeeeeeeccchheeeecC Confidence 999999999999999999999999999999999999866 No 11 >protein:vir:106734 Length: 336 # NCBI annotation: gp13 # Family: family:all:1653 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944321;genbank:gi:38638620;genbank:GeneID:2657363 Probab=100.00 E-value=3.9e-81 Score=461.39 Aligned_cols=324 Identities=12% Similarity=0.053 Sum_probs=291.7 Q ss_pred ccchHHhh--hccceeecCccccccccchhhhhhhhhhc-CCccccchhhhh-HHHHHHHHHHHHHHHHhhhccccchhh Q lcl|NC_020082. 5 TIDAQTIQ--GNQWLVHKGYVSRNGDQWVINNTALDAIG-NPNVMLDADGGI-AFYISQLAGIEATVYETPYGDITYRSD 80 (354) Q Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~amda~~-~~~~~~dA~~~~-~fl~~~L~~id~~v~e~~~~~l~~r~~ 80 (354) .=|+|.++ +++||++++...+..++... +||||+- .|.+.+.++.++ .||+ ++|||++||++++++++.++ T Consensus 1 ~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~--~a~da~d~~~~~~t~~~~g~~~~l~---~~i~p~~~~~~~~~~~~~~l 75 (336) T protein:vir:10 1 MRDAQRIQNLARAGVILPRSVKNVSTPLAE--YAMDAADLSPHLSSTGSSGIPNYLT---TYVDPSVIDILVAPMKAAEL 75 (336) T ss_pred CchHHHHHHHhccCeecchhhhhhhHHHHH--HHHhhhhhccccccCCCcchHHHHH---hhcCcceeeeeechhchhhh Confidence 56888888 89999999999988888764 6888765 455677777766 6887 79999999999999999999 Q ss_pred ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHH Q lcl|NC_020082. 81 VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARL 160 (354) Q Consensus 81 v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~a 160 (354) +|+.++++|++++++|.++|.+|++++|+|+ +|+|++|++++++++++++++.+|+|+.+|+++|+++|++|+.+|+.+ T Consensus 76 ~~v~t~g~w~~~~~~~~~~e~~G~a~~ygd~-~d~P~~d~~~~~~~~~v~~~~~g~~yg~~El~~A~~~g~~l~~~Ka~a 154 (336) T protein:vir:10 76 VGESKKGDWTTLVAAFITAEPTTKVATYGDY-SSDGDSGTNINYPQRQSYFFQTWTRWGERELEMAGAGRVDLASELNYS 154 (336) T ss_pred cccccCCCcceeeEEEEeeeeeeeEEEcccc-CCCcceeeeeeeeeeeEEEEEEEEeeCHHHHHHHHHhCCCcHHHHHHH Confidence 9999999999999999999999999999987 678999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhhheeeeeehhhCceeeeecCCccc--eeccccccccCHHHHHHHHHHHHHHHHHHhCCc---ccccEEEeC Q lcl|NC_020082. 161 AFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL--SSATKDYKTMNGQELFNMLNAPIFSVINLSRRF---HVPNTALMF 235 (354) Q Consensus 161 A~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~--~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~---~~p~~L~l~ 235 (354) |++++++++|+++|+|++++|++||||||+++. +.++++|++||++||++||++++++|+.+|+|. +.|++|+|| T Consensus 155 A~~ale~~~N~~~~~Gd~~~~~~GllN~P~l~a~~t~~~~~w~~~T~~eI~~Di~~~~~~l~~qt~g~i~~~~~~tL~Lp 234 (336) T protein:vir:10 155 SALGLAKFLNGSYLFGVAGLENYGLINDPSLSAPITATTPWSGSPAVEAVVNEVVTLFQVLQTQSQGIITQEAVLHMGLP 234 (336) T ss_pred HHHHHHHhhCeEEEEeecccceEEEeecCCCCcccccCcCcccccCHHHHHHHHHHHHHHHHHhcCCeeeeccceEEEec Confidence 999999999999999999999999999999974 335667899999999999999999999999986 468899999 Q ss_pred HHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE---cCcceEEEe Q lcl|NC_020082. 236 PDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD---KSDRNLAMA 312 (354) Q Consensus 236 p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~---~d~~~~~~~ 312 (354) |+.+.+|+++ +.+++|+++|||+|+ ++++|+.++||+++ |.+++..|. .++++++++ T Consensus 235 ~~~~~~L~~~---n~~g~tv~~~lk~n~-------Pnl~i~t~pel~~A----------gg~~~~~~~~~~~~~~t~~~~ 294 (336) T protein:vir:10 235 PTAMSDLSKT---NQYGLSAAAKLKEIF-------PKLEFVTIPEYDTA----------SGRLVQLWAPRVEGKDTATCG 294 (336) T ss_pred hHHHHhccCC---CccCccHHHHHHHhC-------CccEEEEccccccc----------CCceEEEEEecccCCcceeee Confidence 9999999864 568899999999984 45789999998643 224555554 347899999 Q ss_pred eccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 313 NPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 313 vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|++|++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 295 ~P~~f~~lpvq~~~~~~~v~~~~rt~Gv~i~rP~ai~~~~GI 336 (336) T protein:vir:10 295 FTEKMRAHSIERYSSYFRQKKSAGTWGAVIFRPFAVAQMLGV 336 (336) T ss_pred cChhhhccceeecCceeEeccccceeeeeeeccchheeeccC Confidence 999999999999999999999999999999999999999866 No 12 >protein:vir:107732 Length: 379 # NCBI annotation: gp23 # Family: family:all:1653 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024871;genbank:gi:48697513;genbank:GeneID:2948349 Probab=100.00 E-value=1.1e-79 Score=453.51 Aligned_cols=328 Identities=13% Similarity=0.083 Sum_probs=280.8 Q ss_pred Cccccc-----chHHhhhccceeecCccccccccchhhhhhhhhhcCC-------ccccchhhhh-HHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTI-----DAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNP-------NVMLDADGGI-AFYISQLAGIEATV 67 (354) Q Consensus 1 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~-------~~~~dA~~~~-~fl~~~L~~id~~v 67 (354) |+.-.- |...+ ++|||+++|..+.+.++ ..+|||+.... .+.+.+++++ .||. +++ |++ T Consensus 19 ~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~~---~~~amd~~~~~~~~~~~~~l~~~~~~g~~~~l~---~~~-p~~ 90 (379) T protein:vir:10 19 MVMDSADVTLDNLKHL-ESYGIHLNGRKNKLFEL---MQFAMDSNDIGPIPTPLSPLSPVSIPGLIQFLQ---NWL-PGH 90 (379) T ss_pred hhhccccccHHHHHHH-HhcCccccchhhhhhhh---hhhhhccccccccccccCccccccccchHHHHH---hhc-chH Confidence 322222 33344 57999999998877653 34699987322 3344456655 5776 556 899 Q ss_pred HHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHH Q lcl|NC_020082. 68 YETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSA 147 (354) Q Consensus 68 ~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~ 147 (354) +++..+++++.+++|+.+.++|++++++|.++|.+|++++|++++|+ |+++++++++++++++++.+|+|+++|+++|+ T Consensus 91 i~~~tap~~a~~l~pv~t~g~W~~~~~~~~v~e~~G~A~~ygd~~d~-pl~d~~~~~~~r~v~~~~~g~~yg~~El~~Aa 169 (379) T protein:vir:10 91 VRILTAVREADEFLGLSTVGQWDDEQIVQRVLEGLGTAQPYTDGGNM-ALMSWTPTFETRTVVRFEAGLQVAPLEEARSS 169 (379) T ss_pred HHHHhhhhhhhhhcccccCCCceeeeEEEeeeeeeeeeEEeccccCC-CeeeeeeeeeeeeeEEEEEEEeecHHHHHHHH Confidence 99999999999999999999999999999999999999999998765 99999999999999999999999999999999 Q ss_pred HhCCCcchHHHHHHHHHHHHHhhheeeee--ehhhCceeeeecCCccce-------eccccccccCHHHHHHHHHHHHHH Q lcl|NC_020082. 148 AMNMPIDAEQARLAFRGAEEHSQSVAYFG--DSSRGMYGLFNNPNVTLS-------SATKDYKTMNGQELFNMLNAPIFS 218 (354) Q Consensus 148 ~~g~~ld~~k~~aA~~~~~~~~n~~~f~G--~~~~gi~GLlN~p~~~~~-------~~~~~w~~~T~~ei~~di~~~~~~ 218 (354) ++|++|+.+|+.+|++++++++|+++|+| ++++++|||||||+++.. .++++|++||++||++||++++++ T Consensus 170 ~~g~~l~~~Ka~aA~~ale~~~N~i~f~G~~d~~~~~yGllNdP~l~a~~t~atg~~~~t~Wa~kT~~eI~~Di~~~~~~ 249 (379) T protein:vir:10 170 RVQVSSADEKRAMVGEALEVQRNRVAFYGYNDGSGRTFGFLNDPNLPAYVAVPNGAGGSPLWAQKTTLEIIADLRNGLTA 249 (379) T ss_pred HhCCChHHHHHHHHHHHHHHhhceEEEEeecCCCcceEEEEeCCCCcccccccCCcccccccccCCHHHHHHHHHHHHHH Confidence 99999999999999999999999999999 568899999999999742 123679999999999999999999 Q ss_pred HHHHhCCcc----cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccC Q lcl|NC_020082. 219 VINLSRRFH----VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNS 294 (354) Q Consensus 219 l~~~s~g~~----~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~ 294 (354) ++.+|+|.+ .|++|+|||+.+.+|+++ +.+++|+++||++|+ ++++|+.++||+++ +.+ T Consensus 250 l~~qs~g~~~~~~~~~tL~LP~~~~~~L~~~---n~~g~Tvl~~lk~n~-------Pnl~i~t~pEL~~a-------ggg 312 (379) T protein:vir:10 250 LQVQSMGRIKSNKTPITIGIPNAYENYITTP---TELGYSVAQYMRESY-------PNVTFVSAPELNDA-------NGG 312 (379) T ss_pred HHHhhCCeecccccceeEEecHHHHHhhccc---cccCccHHHHHHHhc-------CCcEEEEccccccc-------CCC Confidence 999999975 455999999999999865 467899999999984 46889999999754 334 Q ss_pred cceEEEEEEc-------CcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 295 NKPRYMVYDK-------SDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 295 g~d~~v~y~~-------d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |+++++.++. +++.+.+++||+|++||+|+++++|++||++|||||+||||++|+|+|=| T Consensus 313 ~~~~~~~~~~~~~~~t~~~~~~~~~~p~k~~~l~ve~~~~~~~~~~~~rt~Gv~ir~P~Ai~~~~G~ 379 (379) T protein:vir:10 313 SSAIYYYADAVENNGTDDGRTWLQVVPTKMFTLGVEKKIKGYAEGYTNATAGAMLKRPFATYRQTGA 379 (379) T ss_pred ccEEEEEeeccCCCccCCcceEEEecchhhhhccceecCceeEeccccceeeeeeecchhhheecCC Confidence 5566555543 34578999999999999999999999999999999999999999999999 No 13 >protein:vir:99576 Length: 388 # NCBI annotation: hypothetical protein # Family: family:all:1653 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039801;genbank:gi:126011051;genbank:GeneID:4818271 Probab=100.00 E-value=8.6e-78 Score=443.09 Aligned_cols=334 Identities=10% Similarity=0.000 Sum_probs=283.6 Q ss_pred Cccc----ccchHHhh--hccceeecCccccccccchh----hhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 1 MAIK----TIDAQTIQ--GNQWLVHKGYVSRNGDQWVI----NNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYET 70 (354) Q Consensus 1 ~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~ 70 (354) |+-+ ++|...++ +++||+++|...++..+.-. ..+||||+-.+ +.+.++.+ +...+|+++||+++++ T Consensus 21 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~a~da~~~~-~~t~~~~g--ip~~~~~~~~p~~~~~ 97 (388) T protein:vir:99 21 MANGKADYRLTDMAVRELKKFGLVFDHATVKRQIELLHEGGVATQAFDSAYVA-PTTQASIP--TPIQFLQQWLPGFVKV 97 (388) T ss_pred hhcCCcceeeechhhHhhhhcceeccCccchhhhhhhhhhhhhhcccCccccc-ccccCccc--HHHHHhhhhccceeee Confidence 3332 36665553 77999999987765332222 23689975432 35666654 4677789999999999 Q ss_pred hhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhC Q lcl|NC_020082. 71 PYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMN 150 (354) Q Consensus 71 ~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g 150 (354) .++++++.++||+.+.++|.+++++|.++|.+|++++|++++|+ |++++++++.++++++++++|+|+++|+++|+++| T Consensus 98 ~~~p~~~~~l~pv~t~g~W~~~~~~f~v~e~~G~A~~ygd~~D~-Pl~d~~~~~~~r~v~~~~~g~~yg~~El~~A~~~g 176 (388) T protein:vir:99 98 LTSARKIDEILGVKTVGSWEDQEIVQGIVEPAGTAMEYGDLTNI-PLSSWNVNFERRTIVRGEMGIQVGLLEEGRASAMR 176 (388) T ss_pred eechhhhhhhccccccCCccceeEEEeeeecceeEEEeecccCC-CceeccceeeeeeEEEEEeeeeecHHHHHHHHhhC Confidence 99999999999999998887899999999999999999998665 99999999999999999999999999999999999 Q ss_pred CCcchHHHHHHHHHHHHHhhheeeeeehh---hCceeeeecCCccce------eccccccccCHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 151 MPIDAEQARLAFRGAEEHSQSVAYFGDSS---RGMYGLFNNPNVTLS------SATKDYKTMNGQELFNMLNAPIFSVIN 221 (354) Q Consensus 151 ~~ld~~k~~aA~~~~~~~~n~~~f~G~~~---~gi~GLlN~p~~~~~------~~~~~w~~~T~~ei~~di~~~~~~l~~ 221 (354) ++|+.+|+.+|++++++++|+++|||+.+ .+++||||||+++.. .+++.|++||++||++||++++++|+. T Consensus 177 ~~l~~~Ka~AA~~ale~~~N~i~f~G~~g~~~~~~yGllNdP~l~a~v~at~~~~~~~Wa~kT~~eI~~Di~~~~~~i~~ 256 (388) T protein:vir:99 177 INSAEVKRQGAAVQLEIMRNAIGFYGWEGKNGNRTFGFLNDPSLLPAIASTTPGGWVSGGANAFQGIVGDLRLMLITLRV 256 (388) T ss_pred CCcHHHHHHHHHHHHHhhhceEEEEeecCCCccceEEEeeCCCcccccccccCCcCcccccCCHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999764 479999999998743 234579999999999999999999999 Q ss_pred HhCCcccc----cEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcce Q lcl|NC_020082. 222 LSRRFHVP----NTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKP 297 (354) Q Consensus 222 ~s~g~~~p----~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d 297 (354) +|+|.+.| .+|+|||+.+.+|+++ +.+++|+++||++|+ ++++|+.++||+.+. +.+|.+ T Consensus 257 qs~g~~~~~~~~~tL~LP~~~~~~Ls~~---n~~g~Tvl~~lk~n~-------Pnl~i~t~pEl~~a~------~tgg~~ 320 (388) T protein:vir:99 257 QSEDNIDPEDVDITLVLPMNKVDMLSVV---TDLGISVRDWLKQTY-------PRVRVMSAPELQGGN------PDDGKD 320 (388) T ss_pred hcCCeeeecccceEEEechHHHHhcccc---CcCCccHHHHHHHhc-------CCcEEEEeccccccc------ccCCce Confidence 99998765 4899999999999764 457899999999984 568999999987552 234556 Q ss_pred EEEEEEcC-----------cceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 298 RYMVYDKS-----------DRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 298 ~~v~y~~d-----------~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +++.|.++ .+.+.+.+|++|++||+|+++++|++||++|||||+||||++|+|+|== T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~l~vq~~~~~~~~~~~~rt~Gv~ir~P~Ai~~~~GI 388 (388) T protein:vir:99 321 IAYMFLDSVDTAVDGSTDGGDTWAQLVQSKFVTLGVEKRVKNYVEAYSNATAGVMLKRPWAVVRLIGL 388 (388) T ss_pred eEEEEecccccccccCccCcceeEEecccccccccceecCceeEeccccceeeeEEeccchhheeccC Confidence 67777543 4567888999999999999999999999999999999999999999866 No 14 >protein:vir:96079 Length: 382 # NCBI annotation: hypothetical protein ORF023 # Family: family:all:1653 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294440;genbank:gi:149408337;genbank:GeneID:5237198 Probab=100.00 E-value=1.3e-75 Score=431.17 Aligned_cols=336 Identities=10% Similarity=0.031 Sum_probs=280.0 Q ss_pred Cccc--ccchHHhhhccceeecCcccccc------ccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhh Q lcl|NC_020082. 1 MAIK--TIDAQTIQGNQWLVHKGYVSRNG------DQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPY 72 (354) Q Consensus 1 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~ 72 (354) |-.+ +.++-..-+++||++++++.... ........||||.. +.+.+.+++++ ....|+++||+++++++ T Consensus 19 ~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~amDa~~-~~~~t~~~~g~--p~~~l~~~~p~~~~~~~ 95 (382) T protein:vir:96 19 FDLKNVTHEAVAALGRIGLVFDHAVVQDQIKALAKAGAFRSGSAMDSNF-TAPVTTPSIPT--PIQFLQTWLPGFVKVMT 95 (382) T ss_pred hhhhcccHHHHHHHhccccccCcccchhHhhhhhhhhhhhhhccccccc-CCccccCCccH--HHHHHhhhhhhhhhhhh Confidence 1111 22222223779999999864321 11222346999852 44556666665 56667999999999999 Q ss_pred ccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCC Q lcl|NC_020082. 73 GDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMP 152 (354) Q Consensus 73 ~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ 152 (354) +++.+++++|+.+.++|.+++++|.++|.+|++++|+|++|+ |++++++++.+++++.++++|+|+.+|+.+|+++|++ T Consensus 96 ~p~~~~~l~pv~t~g~W~~~t~ty~~~e~~G~A~~ygd~~D~-Pl~d~~~~~~~r~v~~~~~g~~yg~lE~~rAa~~~~~ 174 (382) T protein:vir:96 96 AARKIDEIIGIDTVGSWEDQEIVQGIVEPAGTAVEYGDHTNI-PLTSWNANFERRTIVRGELGLLVGTLEEGRASAIRLN 174 (382) T ss_pred hhhhhhhhccccccCCccceEEEEeeeecccceEEeecccCC-CccccccceeEEEEEEEEEeeeecHHHHHHHHhhCCC Confidence 999999999999988777899999999999999999998765 9999999999999999999999999999999999999 Q ss_pred cchHHHHHHHHHHHHHhhheeeeeeh---hhCceeeeecCCccce--eccccccccCHHHHHHHHHHHHHHHHHHhCCcc Q lcl|NC_020082. 153 IDAEQARLAFRGAEEHSQSVAYFGDS---SRGMYGLFNNPNVTLS--SATKDYKTMNGQELFNMLNAPIFSVINLSRRFH 227 (354) Q Consensus 153 ld~~k~~aA~~~~~~~~n~~~f~G~~---~~gi~GLlN~p~~~~~--~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~ 227 (354) +..+|+.+|++++++++|+++|+|+. +.+++||||||++++. .++++|++||++||++||++++++|+.+|+|.+ T Consensus 175 l~~~Ka~aA~~ale~~~N~i~f~G~~~g~~~~~yGllNdP~l~a~~t~a~~~Wa~kT~~eI~~Di~~l~~~i~~qt~G~~ 254 (382) T protein:vir:96 175 SAETKRQQAAIGLEIFRNAIGFYGWQSGLGNRTYGFLNDPNLPPFQTPPSQGWATADWAGIIGDIREAVRQLRIQSQDQI 254 (382) T ss_pred cHHHHHHHHHHHHHHhhceEEEEeeecCcCcceEEEEeCCCcccccccCCCCcccccHHHHHHHHHHHHHHHHhccCCee Confidence 99999999999999999999999973 4689999999999853 456789999999999999999999999999987 Q ss_pred c----ccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 228 V----PNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 228 ~----p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) . |.+|+|||+.+.+|+++ +.+++|+++||++|+ ++++|+.+++|+.+.. .|.++.++++.|. T Consensus 255 ~~~~~~~~L~LP~~~~~~Ls~~---n~~g~Tvl~~lk~n~-------Pnl~i~t~peL~~a~~----~g~g~~~~~~~~~ 320 (382) T protein:vir:96 255 DPKAEKITMALATSKVDYLSVT---TPYGISVSDWIEQTY-------PKMRIVSAPELSGVQM----QGKTPEDALVLFV 320 (382) T ss_pred eecccceEEeechHHHhhcccc---CccCccHHHHHHHhc-------CCcEEEEccccccccC----CCccceeEEEEec Confidence 5 45899999999999764 467899999999984 5689999999986533 2335788999987 Q ss_pred cCc-----------ceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSD-----------RNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~-----------~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+. ..+.+.+|..++++++|++.++|++||+++||||+||||++|+|+|== T Consensus 321 ~e~~~~~~~s~~~p~~f~q~~p~~~~~l~ve~~~~~~~~~~s~~t~Gv~i~~P~ai~~~~GI 382 (382) T protein:vir:96 321 EEVDASVDGSTDGGSVFSQLVQSKFITLGVEKRAKSYVEDFSNGTAGALCKRPWAVVRYLGI 382 (382) T ss_pred chhhhhcccccccCcceeccccceeeeccceeecceeEeccccceeeeEEEcchhhhhccCC Confidence 653 344445556667789999999999999999999999999999999866 No 15 >protein:vir:105778 Length: 358 # NCBI annotation: gp9 # Family: family:all:10995 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224147;genbank:gi:62362222;genbank:GeneID:3342531 Probab=99.74 E-value=4.6e-21 Score=132.08 Aligned_cols=328 Identities=10% Similarity=0.087 Sum_probs=211.5 Q ss_pred Ccc-ccc--chHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhcc--c Q lcl|NC_020082. 1 MAI-KTI--DAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGD--I 75 (354) Q Consensus 1 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~--l 75 (354) |-. |.+ .-+.++ .+|=++--.++- +......-||-+.+..-+-.+..++...|-..-|..+|.++.+...++ + T Consensus 1 ~~f~K~~~an~~~~~-~qw~~L~~~Rna-~n~~~~a~maan~a~~~~~~~~~NAv~~v~~D~wr~~D~~~~q~fr~e~~~ 78 (358) T protein:vir:10 1 MYFSKETLATNSRLG-GHWNELWANRNM-WNAQHDAMIAANRSNMTPEWLAVNAVGGFTRDFWAEIDRQVLQLRDQEVGM 78 (358) T ss_pred CeechhhhhhHHHHH-HHHHHHHHHHHH-hhhhhhhHHhhhHHHhhhhhheecccccCCHHHHHHHhhhhhhhcccchhH Confidence 111 100 001111 111111111111 111111112222221111122224444455666788999999877664 3 Q ss_pred c-chhhccccCCCCCceeeEEEeeecc-cCceeE-ecC-CCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCC Q lcl|NC_020082. 76 T-YRSDVPMAANIPEYADTWMYRSYDG-VTMGKF-IGA-NGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNM 151 (354) Q Consensus 76 ~-~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~-~~~-~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~ 151 (354) . .-+|+++.+.++.+.....|.+... .|++.. +++ -+.++..+.+++ +.-||+.+..+|..+|||++..+-.|+ T Consensus 79 ~l~NDLm~ls~sv~Igktv~~y~~~gd~~~~v~~SmsGQ~~~~lD~~~y~~--dGtpiPIfdsg~~f~WR~~~~~~~~g~ 156 (358) T protein:vir:10 79 EIVNDLIGVQTVLPVGKTAKLYNVIGDIADDVSVSIDGQAPFSFDHTEYAS--DGDPIPVFTAGYGVNWRHAAGLNSLGI 156 (358) T ss_pred HHHhhhhhccccccHHHHHHHHhhhcCCCceEEEEecccCcccccceeeec--cCCEeeeeccCccccccchhhcCcccc Confidence 3 3478899999999988888887665 776642 333 334455555554 445666667888999999999999999 Q ss_pred CcchHHHHHHHHHHHHHhhheeeeeehh-----hCceeeeecCCccceec-------cccccccCHHHHHHHH-HHHHHH Q lcl|NC_020082. 152 PIDAEQARLAFRGAEEHSQSVAYFGDSS-----RGMYGLFNNPNVTLSSA-------TKDYKTMNGQELFNML-NAPIFS 218 (354) Q Consensus 152 ~ld~~k~~aA~~~~~~~~n~~~f~G~~~-----~gi~GLlN~p~~~~~~~-------~~~w~~~T~~ei~~di-~~~~~~ 218 (354) ++.++.+++..+++.++.-+.+|+|+.+ +-.+||-|||++..... .-|++++|+++++..+ .+++.+ T Consensus 157 d~~~daQ~~~~~kv~~~~vdy~lNG~~~I~v~g~t~~Glrn~~n~~qv~l~~~s~g~NiDlttat~~a~~~~f~~~l~~~ 236 (358) T protein:vir:10 157 DLVLDSQMAKMRKFNQKRVNYYLNGDPNIQVQSYPAQGIKNHRNTKKINLGSGSGGANIDLTTADMTALFAFFGKGAFGT 236 (358) T ss_pred chhHHHHHHHHHHHHHHHHhhhhccCCceeecCcccccccCCcceeEEEeccCCCcceeeeccCCHHHHHHHHHHHHHHH Confidence 9999999999999999999999999865 45799999999874332 3478999999999988 555666 Q ss_pred HHHHhCCcccccEEEeCHHHHHHHhhccCCCCC-CchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcce Q lcl|NC_020082. 219 VINLSRRFHVPNTALMFPDLWNQANNQLMTGYT-DRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKP 297 (354) Q Consensus 219 l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~-~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d 297 (354) +.. .+....-.+++++|+.+..|.+.+...++ ..|||+++++-... -+|.+.+.|. .+ T Consensus 237 ~~~-~N~~~~~~~~~vs~ei~~n~~r~Y~~~~~~~gTIl~~vl~~~~v-------a~I~~~~~Ls-------------gN 295 (358) T protein:vir:10 237 LAR-ANKVAQYDVMWVSPEIWANLAQPYVVNGVVSGNVLNAVLPFAPV-------REIRQTFALS-------------GN 295 (358) T ss_pred HHh-hcccceeeEEEEcHHHHhhhhcccccccccchhhHHHhhcccCc-------ccccccccCC-------------Cc Confidence 654 46677778999999999999987765543 56999999985322 2455555543 24 Q ss_pred EEEEEEcCcceEEEeeccchhccccccc--CceeEEeeeeeeeeEEEECcce----eeeeecC Q lcl|NC_020082. 298 RYMVYDKSDRNLAMANPIPFRMLAPQMA--SLGITVPAEYKISGTEFRYPLC----AAYVDMA 354 (354) Q Consensus 298 ~~v~y~~d~~~~~~~vp~~~~~~~~~~~--~~~~~~~~~~~~gGv~i~~P~a----i~y~D~~ 354 (354) -+++|.+..+++.-.+.||+-..|.--. +-+|.+..++.. |++||.-.. ++|.--- T Consensus 296 eii~~~~~~~vi~plvG~~~gt~~~pR~~p~ddY~f~vwsA~-glqik~D~~Gks~Vv~~~~~ 357 (358) T protein:vir:10 296 EFIAYVRRQDIISPLVGMAVGVVPLPRPLPNVNYNFQIMSAE-GLQITADDQGLSGVVYGANL 357 (358) T ss_pred cEEEEEeCCceeeeeecceeeeecCCCCCCCcchhhhhhhhh-ceeeeeccccceeeEeeccc Confidence 5899999999999999999877654222 346777667765 476664321 1110000 No 16 >protein:vir:94673 Length: 419 # NCBI annotation: major capsid protein # Family: family:all:585 # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579208;genbank:gi:93007444;genbank:GeneID:5076792 Probab=98.97 E-value=3.4e-10 Score=72.47 Aligned_cols=318 Identities=12% Similarity=0.048 Sum_probs=165.4 Q ss_pred CcccccchH-----HhhhccceeecCccccccccchhhh-hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhcc Q lcl|NC_020082. 1 MAIKTIDAQ-----TIQGNQWLVHKGYVSRNGDQWVINN-TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGD 74 (354) Q Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~ 74 (354) -..+.+.-. .....-+....+............. ..+++ ..-.+ ..++..+.. +.+...+....... T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~p--~~~~~~i~~~~~~~ 151 (419) T protein:vir:94 79 GTFRSLAQRFADSDGLREYRARDKRGQFQVEMRDIDPNRLLSRDA---PAGTI--TNPNVPHLP--QLVPGIVPTTPDLP 151 (419) T ss_pred ccccchhhhhhhHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcccc---ccccc--cCCcccccc--hhhhHHHHHHHhhh Confidence 000000000 0000000000000000000000000 00000 00000 011111222 23444455555666 Q ss_pred ccchhhccccCCCCCceeeEEEee--------ecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHH Q lcl|NC_020082. 75 ITYRSDVPMAANIPEYADTWMYRS--------YDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKS 146 (354) Q Consensus 75 l~~r~~v~v~~~~~~~~~~~~~~~--------~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a 146 (354) ...+.++.+..... ..+.|.. ....+.+.|++..+. +|..+..++......+.++.-+.++.+=++.+ T Consensus 152 ~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~v~Eg~~-~~~~~~~~~~i~~~~~k~~~~~~is~ell~d~ 227 (419) T protein:vir:94 152 LLVADLLDQQNADY---NVLEYIRDTSGTAGAGSTWNKAAVVPEGTA-KPQSTLSFDTITTTLKTVAHWLPITRQAADDN 227 (419) T ss_pred hhhhhcceeeeccC---CceeeeeeccccccccccCcccceecCCcc-ccccccceeeEEeeeeeEEEeehhhHHHHHhH Confidence 66677666543322 2222222 222345667776544 67777778888999999999999987666543 Q ss_pred HHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCc Q lcl|NC_020082. 147 AAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRF 226 (354) Q Consensus 147 ~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~ 226 (354) . ++..--....++++...+|+.+++|+......|+++.+++........+...|....+++|.+++..+... + T Consensus 228 ~----~l~~~i~~~la~a~~~~~d~aii~G~G~~~p~Gi~~~~~~~~~~~~~~~~~~t~~~~~~~l~~~~~~~~~~--~- 300 (419) T protein:vir:94 228 S----QLMGYIQGRLTYGLRFLRDRQLLNGNGSTEMQGILTTPGIGTYQQPKPTAPATDEPPLVDIRRAKTVAEIA--G- 300 (419) T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhccCcccccceecccccccccccccccccccchhHHHHHHHHHhhhhc--c- Confidence 2 47777788899999999999999999988899999999988766665666677888899999999998742 2 Q ss_pred ccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCc Q lcl|NC_020082. 227 HVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSD 306 (354) Q Consensus 227 ~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~ 306 (354) ..+..++|+|+.|..|....-+. .+. |+...+ ...+.+-+|...|.+.+..... ++ .+..+.+ T Consensus 301 ~~~~~~v~n~~~~~~l~~~k~~~-~~~----~~~~~~---~~~~~~~~l~G~pV~~~~~~~~------~~--~~~gd~~- 363 (419) T protein:vir:94 301 FPPDGVVVHPQDWESIELDQAPG-SGV----FRVIAN---VQGEATPRIWGLNVVSTVAIAQ------GT--ALVGGFR- 363 (419) T ss_pred CCCCEEEEcHHHHHHHHHHhhcC-CCc----eeecCC---cccCCCccccceeeEEcCCCCC------cc--EEEeecc- Confidence 45679999999999997543322 221 111111 1123333455555544433211 11 1111111 Q ss_pred ceEEEeeccchhccccc-cc----CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 307 RNLAMANPIPFRMLAPQ-MA----SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 307 ~~~~~~vp~~~~~~~~~-~~----~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.+.+..-+.++..... .. .-...+.++.+++ +.+++|.+|+++.++ T Consensus 364 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~r~~~r~d-~~v~~~~a~~~~~~~ 415 (419) T protein:vir:94 364 QGATLWSRQGITVLMTDSHADFFTANTLVILAEFRAN-LAVYQPKAFVRVTFA 415 (419) T ss_pred ceEEEEEecceEEEEeccccchhhcCcEEEEEEEeec-cEEeccccEEEEEec Confidence 11111111122221111 11 1123455667765 667889999999999 No 17 >protein:vir:9574 Length: 300 # NCBI annotation: gp40 # Family: family:all:966 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862879;genbank:gi:32469471;genbank:GeneID:1461316 Probab=98.93 E-value=3.3e-10 Score=72.59 Aligned_cols=282 Identities=9% Similarity=-0.048 Sum_probs=164.2 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |-.+.++++.++- +.+.+++++...+.-..+++.++.. .+.+ ...+.+....+.+.|++.. ..+|..+...+. T Consensus 1 ma~~t~~~G~lip---~~~~~~ii~~l~~~s~i~~l~~~~~-~~~~--~~~~p~~~~~~~a~wv~Eg-~~~~~s~~~f~~ 73 (300) T protein:vir:95 1 MSEAQLSKGNLFN---PELVTKVINKVKGHSSIAKLSPQKP-IPFN--GQREFVFDFDSDIDIVAEN-GKKTHGGVSLDP 73 (300) T ss_pred CcccccCCcceec---hhhHHHHHHHHHhhhhhhhhcceee-ccCC--ceEEEEEecCcceEEeeCC-ccccccccccee Confidence 2222334444443 3456778887777777777766542 2222 3456666666788899875 558888888888 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeeh-----hhCceeeeecCCccceecccc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDS-----SRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~-----~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.+.++.-..+|.+=+.+..-...++...-.+..++++++.+|+.+|+|.. ..++.|..+.++.....+..+ T Consensus 74 v~l~~~k~~~~~~iS~ell~~~~d~~~~l~~~i~~~l~~aia~~~d~~~l~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 153 (300) T protein:vir:95 74 VTIVPLKVEYGARVSDEFLHASEEAKVDMLTDFVEGFSKKLARGLDIMSIHGINPRTKQASTIIGDNCFDKKVTQTVPFK 153 (300) T ss_pred eEeeeEEEEEeehhhHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccccccceeeccc Confidence 888999999888887654433223445677778889999999999999999952 234566666665544333322 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeec Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRF 279 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~ 279 (354) . ...+++|.+++..+... ...|..++|+|..+..|.+.. +..|..++.-. ...+.+-++-..| T Consensus 154 ~-----~~~~~~i~~~~~~~~~~---~~~~~~~vmn~~~~~~L~~lk--d~~G~~i~~~~-------~~~~~~~~l~G~P 216 (300) T protein:vir:95 154 D-----TNPDESMEDAVGMIDGS---ERDITGAILDPIFTTALSKMK--NAEGGKLYPEL-------AWGGVPDAINGLA 216 (300) T ss_pred c-----cchHHHHHHHHHHhhhc---CCCccEEEECHHHHHHHHHhh--ccCCCeeccCc-------cccCCCceeccee Confidence 2 12357888888877542 245678999999999996532 44443332111 1123344555555 Q ss_pred eeeeccccccccccCcceEEEEEEcCcceEEEeecc--chhcccc-cccC----c----eeEEeeeeeeeeEEEECccee Q lcl|NC_020082. 280 QLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPI--PFRMLAP-QMAS----L----GITVPAEYKISGTEFRYPLCA 348 (354) Q Consensus 280 ~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~--~~~~~~~-~~~~----~----~~~~~~~~~~gGv~i~~P~ai 348 (354) .+.+...... ....++.+++-+.+ +.+.+.+-+ .+.+.+- ...+ + ..-+.++.|+ |+.+++|.+| T Consensus 217 v~~s~~v~~~--~~~~~~~~~~GDf~-~~~~~~~~~~~~~~v~~~~~~d~~~~~~f~~~~v~~r~~~r~-d~~v~~~~a~ 292 (300) T protein:vir:95 217 VDKNRTVSYS--QTDPKNTAIVGDFE-TMFKWGYAKEVPMEIIKYGDPDNSGRDLKGYNQIYIRCEAYI-GWGIMDAASF 292 (300) T ss_pred eEEecCCCCC--CCCCccEEEEeecc-ceEEEEEecccEEEEeeccCCCCcchhhhhcCcEEEEEEEee-cceeecccce Confidence 5444433221 12233333322221 111111111 1111110 1111 1 2455667777 5788889999 Q ss_pred eeeecC Q lcl|NC_020082. 349 AYVDMA 354 (354) Q Consensus 349 ~y~D~~ 354 (354) +++--+ T Consensus 293 ~~l~~~ 298 (300) T protein:vir:95 293 ARIVKT 298 (300) T ss_pred EEEecC Confidence 998887 No 18 >protein:vir:7855 Length: 497 # NCBI annotation: gp12 # Family: family:all:585 # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817462;genbank:gi:29565891;genbank:GeneID:1259081 Probab=98.86 E-value=7.5e-10 Score=70.62 Aligned_cols=331 Identities=12% Similarity=0.083 Sum_probs=166.6 Q ss_pred CcccccchHHhh---------hccceeecCccccc--c--cc---------chhhhhhhhhhcCCccccchhhhhHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ---------GNQWLVHKGYVSRN--G--DQ---------WVINNTALDAIGNPNVMLDADGGIAFYIS 58 (354) Q Consensus 1 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~--~~---------~~~~~~amda~~~~~~~~dA~~~~~fl~~ 58 (354) -..+..+.+... ...+.......... . .. ......+.... ..+.+.+++.+.++.. T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gg~~vp 164 (497) T protein:vir:78 87 QIRKHLARAVIMNPELKNATSFEKGTKFDVSFNVSAKAADPGTAAAELMGAFADGETAPAAI--GQNPFGSTGTFAPGIL 164 (497) T ss_pred hHHHHHHHHHhhhHHHHhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhhhhhHHHH--HhhhcccCcccccccc Confidence 000000000000 00000000000000 0 00 00000000010 1111222233334443 Q ss_pred HHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeeccceeEEEEEEEEeeee Q lcl|NC_020082. 59 QLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECH 137 (354) Q Consensus 59 ~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~ 137 (354) +.+.+.+++...+....+.++++....+ .++.|.... ..+.+.|++..+ .+|..+..++......+.++.-.. T Consensus 165 --~~~~~~ii~~~~~~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~a~wv~E~~-~~~~s~~~f~~i~~~~~k~a~~~~ 238 (497) T protein:vir:78 165 --PTFLPGIVEQLFYELSLADLISSRPVTS---PNLSYLTESAAHNNAAAVAEAG-TYPFSSEEFARVYEQVGKVANALT 238 (497) T ss_pred --hhhhHHHHHHHHhhhhHHhhccccccCC---CceEEEEEcCCCCcceeeccCc-ccccccccceeeEeeeeeeEeecH Confidence 4567789998888888888887654332 235555433 346778888764 478888888888999999998888 Q ss_pred ecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccc---------------- Q lcl|NC_020082. 138 YTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYK---------------- 201 (354) Q Consensus 138 ~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~---------------- 201 (354) +|.+=|+.+ . .+..--....++++++.+|+.+++|+...+..||++.++.........+. T Consensus 239 iS~ell~d~---~-~l~~~i~~~l~~~i~~~~d~~~l~G~G~~~p~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (497) T protein:vir:78 239 ITDEGLRDA---P-ELFNFVQGRLLEGIQRKEEVQLLAGGGYPGVNGLLQRSTGFTASSASSLFGATSATVSNVKFPADG 314 (497) T ss_pred hHHHHHHhH---H-HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccccccccccchhhhhhhhhhhhhhccc Confidence 877544432 2 37788888999999999999999999888899999998754322211110 Q ss_pred ---------------------------------ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCC Q lcl|NC_020082. 202 ---------------------------------TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMT 248 (354) Q Consensus 202 ---------------------------------~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~ 248 (354) ..+....+.++..++..+.. .+...|..++|+|..|..|.+- - T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vmn~~~~~~l~~l--k 390 (497) T protein:vir:78 315 TNGAFVGQDTVASLKYGRVVTGAAGSGSGVAGSYPTAAEIAENVFDAFVDIQL--TLFQTPNAVVMNPRDWELLRLT--K 390 (497) T ss_pred ccchhhhhhHHHHHHHHHhhhhhhhhccchhccccchhhhhhHHHHHHhhhhh--hcccCCCeEEEchHHHHHHHHh--h Confidence 01233445556666666554 3556778999999999988543 2 Q ss_pred CCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccc--ccCcceEEEEEEcCcceEEEeeccchhcccccccC Q lcl|NC_020082. 249 GYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGV--SNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMAS 326 (354) Q Consensus 249 ~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~--g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~ 326 (354) +..|.-++.-... ..+....+.+-++...|...+........ |+-+.-...+++ ...+.+.+-. ........ T Consensus 391 d~~G~~i~~~~~~-~~~~~~~~~~~~l~G~pV~~t~~~~~~~~~~Gd~~~~~~~i~~--r~~~~v~~~~---~~~~~f~~ 464 (497) T protein:vir:78 391 DANGQYMGGNFFG-NAYGNPVNGGKNIWGVPVVTTPLIPLGTILVGHFAPSVIQTAR--REGVTMQMTN---SNGTDFVD 464 (497) T ss_pred cCCCceeccCccc-ccccccccCCceeeceeeEecCCCCCCceEEeecccceEEEEE--ecccEEEeec---ccchhhhc Confidence 4444322210000 00000111112344445544433221110 000000111111 1222222110 00011111 Q ss_pred ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 327 LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 327 ~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) =...+.++.|++ +.|++|.+|+++++. T Consensus 465 n~v~~r~~~r~~-~~v~~p~A~~~l~~~ 491 (497) T protein:vir:78 465 GKVTVRAEERLG-LLVYRPSAFQLIQLK 491 (497) T ss_pred CcEEEEEEEeec-ceeeccccEEEEEec Confidence 145667788886 588899999999999 No 19 >protein:vir:101650 Length: 497 # NCBI annotation: gp13 # Family: family:all:585 # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654768;genbank:gi:109302766;genbank:GeneID:4156084 Probab=98.86 E-value=7.5e-10 Score=70.62 Aligned_cols=331 Identities=12% Similarity=0.083 Sum_probs=166.6 Q ss_pred CcccccchHHhh---------hccceeecCccccc--c--cc---------chhhhhhhhhhcCCccccchhhhhHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ---------GNQWLVHKGYVSRN--G--DQ---------WVINNTALDAIGNPNVMLDADGGIAFYIS 58 (354) Q Consensus 1 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~--~~---------~~~~~~amda~~~~~~~~dA~~~~~fl~~ 58 (354) -..+..+.+... ...+.......... . .. ......+.... ..+.+.+++.+.++.. T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gg~~vp 164 (497) T protein:vir:10 87 QIRKHLARAVIMNPELKNATSFEKGTKFDVSFNVSAKAADPGTAAAELMGAFADGETAPAAI--GQNPFGSTGTFAPGIL 164 (497) T ss_pred hHHHHHHHHHhhhHHHHhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhhhhhhHHHH--HhhhcccCcccccccc Confidence 000000000000 00000000000000 0 00 00000000010 1111222233334443 Q ss_pred HHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeeccceeEEEEEEEEeeee Q lcl|NC_020082. 59 QLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECH 137 (354) Q Consensus 59 ~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~ 137 (354) +.+.+.+++...+....+.++++....+ .++.|.... ..+.+.|++..+ .+|..+..++......+.++.-.. T Consensus 165 --~~~~~~ii~~~~~~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~a~wv~E~~-~~~~s~~~f~~i~~~~~k~a~~~~ 238 (497) T protein:vir:10 165 --PTFLPGIVEQLFYELSLADLISSRPVTS---PNLSYLTESAAHNNAAAVAEAG-TYPFSSEEFARVYEQVGKVANALT 238 (497) T ss_pred --hhhhHHHHHHHHhhhhHHhhccccccCC---CceEEEEEcCCCCcceeeccCc-ccccccccceeeEeeeeeeEeecH Confidence 4567789998888888888887654332 235555433 346778888764 478888888888999999998888 Q ss_pred ecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccc---------------- Q lcl|NC_020082. 138 YTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYK---------------- 201 (354) Q Consensus 138 ~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~---------------- 201 (354) +|.+=|+.+ . .+..--....++++++.+|+.+++|+...+..||++.++.........+. T Consensus 239 iS~ell~d~---~-~l~~~i~~~l~~~i~~~~d~~~l~G~G~~~p~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (497) T protein:vir:10 239 ITDEGLRDA---P-ELFNFVQGRLLEGIQRKEEVQLLAGGGYPGVNGLLQRSTGFTASSASSLFGATSATVSNVKFPADG 314 (497) T ss_pred hHHHHHHhH---H-HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccccccccccchhhhhhhhhhhhhhccc Confidence 877544432 2 37788888999999999999999999888899999998754322211110 Q ss_pred ---------------------------------ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCC Q lcl|NC_020082. 202 ---------------------------------TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMT 248 (354) Q Consensus 202 ---------------------------------~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~ 248 (354) ..+....+.++..++..+.. .+...|..++|+|..|..|.+- - T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vmn~~~~~~l~~l--k 390 (497) T protein:vir:10 315 TNGAFVGQDTVASLKYGRVVTGAAGSGSGVAGSYPTAAEIAENVFDAFVDIQL--TLFQTPNAVVMNPRDWELLRLT--K 390 (497) T ss_pred ccchhhhhhHHHHHHHHHhhhhhhhhccchhccccchhhhhhHHHHHHhhhhh--hcccCCCeEEEchHHHHHHHHh--h Confidence 01233445556666666554 3556778999999999988543 2 Q ss_pred CCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccc--ccCcceEEEEEEcCcceEEEeeccchhcccccccC Q lcl|NC_020082. 249 GYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGV--SNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMAS 326 (354) Q Consensus 249 ~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~--g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~ 326 (354) +..|.-++.-... ..+....+.+-++...|...+........ |+-+.-...+++ ...+.+.+-. ........ T Consensus 391 d~~G~~i~~~~~~-~~~~~~~~~~~~l~G~pV~~t~~~~~~~~~~Gd~~~~~~~i~~--r~~~~v~~~~---~~~~~f~~ 464 (497) T protein:vir:10 391 DANGQYMGGNFFG-NAYGNPVNGGKNIWGVPVVTTPLIPLGTILVGHFAPSVIQTAR--REGVTMQMTN---SNGTDFVD 464 (497) T ss_pred cCCCceeccCccc-ccccccccCCceeeceeeEecCCCCCCceEEeecccceEEEEE--ecccEEEeec---ccchhhhc Confidence 4444322210000 00000111112344445544433221110 000000111111 1222222110 00011111 Q ss_pred ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 327 LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 327 ~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) =...+.++.|++ +.|++|.+|+++++. T Consensus 465 n~v~~r~~~r~~-~~v~~p~A~~~l~~~ 491 (497) T protein:vir:10 465 GKVTVRAEERLG-LLVYRPSAFQLIQLK 491 (497) T ss_pred CcEEEEEEEeec-ceeeccccEEEEEec Confidence 145667788886 588899999999999 No 20 >protein:vir:8187 Length: 311 # NCBI annotation: gp7 # Family: family:all:966 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817980;genbank:gi:29566414;genbank:GeneID:2700968 Probab=98.86 E-value=1e-09 Score=69.83 Aligned_cols=287 Identities=11% Similarity=0.010 Sum_probs=157.8 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP 116 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip 116 (354) |-+ .++ + .++.. +.+...+++...+.-..+++.++.. .+.+ ...+......+.+.|++.. ..+| T Consensus 1 mat--------~~~-g-g~lvP--~~~~~~ii~~~~~~s~i~~~~~~i~-~~~~--~~~~p~~~~~~~a~wv~Eg-~~~~ 64 (311) T protein:vir:81 1 MVA--------LAT-G-TFQLP--KHLVPGVWQKAQGQSVLARLSMAEP-QEFG--EQQYMTLTAPPRGEVVGEG-AQKS 64 (311) T ss_pred Cce--------ecC-C-ceEcc--hhHHHHHHHHHHhcchhhhhcceee-cCCC--ceEEEEEeCCceeEEeecC-cccc Confidence 222 211 2 23333 4456778888777777788776542 2223 3556677777788898765 5578 Q ss_pred eeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeeh---hhCceeeeecCCccc Q lcl|NC_020082. 117 RVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDS---SRGMYGLFNNPNVTL 193 (354) Q Consensus 117 ~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~---~~gi~GLlN~p~~~~ 193 (354) ..+...+......+.++.-..+|.+=|+...-...++...-....++++++.+|+.+++|.. ..+..|+++...-.. T Consensus 65 ~~~~~f~~v~l~~~kl~~~~~iS~ell~~~~d~~~~l~~~i~~~la~ai~~~~d~a~l~G~~~~~~~~~~gi~~~~~~~~ 144 (311) T protein:vir:81 65 ESTATFAPVTAIPRKVQVTQRFSQEVKWADESRQLGVLQTMADLSGVALGRALDLIGIHGINPLTGAALSGSPAKILDTT 144 (311) T ss_pred cccceeeEEEEeeEEEEEeehhhHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCcccccccccccccc Confidence 77777888888888888877777653433333445677788889999999999999999974 334556765421111 Q ss_pred eeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccc Q lcl|NC_020082. 194 SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNEL 273 (354) Q Consensus 194 ~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l 273 (354) ......+.+...+..+|.+++..+.. ....|..++|+|..+..|.+-. +..+.-++.-.. ..+.+- T Consensus 145 --~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~vmn~~~~~~l~~lk--d~~G~~l~~~~~-------~~~~~~ 210 (311) T protein:vir:81 145 --NIVELTTGTSATPDLAVEAAVGLVLG---DNLSPDGVALDNTFSFMLATQR--DSQGRKLYPELG-------FGTDVA 210 (311) T ss_pred --eeeeecccccchHHHHHHHHHHHhhh---cCCCceEEEEcHHHHHHHHhhh--ccCCCeeecCcc-------ccCCCc Confidence 11111222233345667777776643 2346678999999999996422 333322221000 012222 Q ss_pred eEEeeceeeeccccccc----------cccCcceEEEEEEcCcceEEEeeccchhcccc----cccC----ceeEEeeee Q lcl|NC_020082. 274 DIQIRFQLDAAELAANG----------VSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP----QMAS----LGITVPAEY 335 (354) Q Consensus 274 ~I~~~~~L~~~~~~~~g----------~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~----~~~~----~~~~~~~~~ 335 (354) ++...|.+......... ....++.+++.-+.+.=.+.+.-.+.+...+- +..+ =...+.+.. T Consensus 211 tl~G~Pv~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~gDfs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~~ 290 (311) T protein:vir:81 211 SFAGLNAAVSDTVRGGPEAVTASTGVYRTTNPNVKAIAGDFSAFRWGVQVSIPLELIEFGDPDGLGDLKRQNQIAIRAEV 290 (311) T ss_pred eecceeEEecccccccccccccccchhcccCCccEEEEEecccEEEEEeccceEEEeccCCCCcchhhhhcCcEEEEEEE Confidence 33333433322211100 01123334444343321111111111222111 1111 124566677 Q ss_pred eeeeEEEECcceeeeeecC Q lcl|NC_020082. 336 KISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 336 ~~gGv~i~~P~ai~y~D~~ 354 (354) |++ ..+.+|.+|+++--| T Consensus 291 r~d-~~v~~~~a~~~l~~a 308 (311) T protein:vir:81 291 VYG-IGIMSTDAFAVVRDA 308 (311) T ss_pred Eec-cEeecccceEEEEee Confidence 774 788899999999888 No 21 >protein:vir:99920 Length: 311 # NCBI annotation: gp7 # Family: family:all:966 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655524;genbank:gi:109392294;genbank:GeneID:4157089 Probab=98.84 E-value=7.7e-10 Score=70.56 Aligned_cols=289 Identities=8% Similarity=-0.057 Sum_probs=160.5 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |.+...+++. +.. +.+..++++...+.-..+++..+.. .+.+ ...+.+....+.+.|++.. ..+|..+...+. T Consensus 1 Mat~tt~~g~-~vP--~~~~~~ii~~~~~~s~l~~~~~~i~-~~~~--~~~~p~~~~~~~a~wv~Eg-~~~~~~~~~f~~ 73 (311) T protein:vir:99 1 MATFGTGNLK-NLP--RNIADGMVKDVVQGSTVAVLSARKP-QRFG--NEDIITFNGRPKAEFVGEG-QQKSSTTGEFDF 73 (311) T ss_pred CceecCCCce-ecc--HHHHHHHHHHHHhhchhhhhcceee-ccCC--ceEEEEEeCCceeEEeecC-cccccccceeeE Confidence 2222122332 333 3455678887777777777766542 2322 3456666677788999775 457877888888 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeeh---hhCceeeeecCCccceecccccc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDS---SRGMYGLFNNPNVTLSSATKDYK 201 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~---~~gi~GLlN~p~~~~~~~~~~w~ 201 (354) .....+.++.-+.+|.+=|+.......++...-....++++++.+|+.+|+|+. ..+..|+.+..+........... T Consensus 74 v~l~~~k~~~~~~iS~ell~~~~d~~~~l~~~i~~~la~ai~~~~d~~~l~G~g~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (311) T protein:vir:99 74 VTSTPKKAQVTMRFNEEVQWADEDYQLGVLQTLSEAGAEALARALDLGLYHRINPLTGTVIPGWSNYLGAASKRVELTAD 153 (311) T ss_pred EEEeeEEEEEeehhhHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccCccccccccccccccceeecccc Confidence 888889988888887664444334556788888899999999999999999975 34455655544333222222222 Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 202 TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 202 ~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) +......||.+++..+... +....++.++|+|..+..|.+-. +..|.-+++ ... ..+.+-.+...|.. T Consensus 154 --~~~~~~~~i~~~~~~~~~~-~~~~~~~~~vmn~~~~~~L~~lk--d~~G~~l~~----~~~---~~~~~~~l~G~Pv~ 221 (311) T protein:vir:99 154 --TIANPDLAIEAAVGLLVAN-GHPTPVNGLALHPSIAWGLSTAR--YTDGRKKFP----ELG---LGIGVSSFEGIDAS 221 (311) T ss_pred --ccchhHHHHHHHHHHHhhh-ccCCCccEEEEcHHHHHHHHhhh--ccCCCeeec----Ccc---cCCCCceecceeeE Confidence 2333456777777766543 22345677999999999996532 333322211 100 01112233333333 Q ss_pred eecccccc--------ccccCcceEEEEEEcCcceEEEeeccchhccccc---cc---Cc----eeEEeeeeeeeeEEEE Q lcl|NC_020082. 282 DAAELAAN--------GVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ---MA---SL----GITVPAEYKISGTEFR 343 (354) Q Consensus 282 ~~~~~~~~--------g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~---~~---~~----~~~~~~~~~~gGv~i~ 343 (354) ....+... ....+.++.+++-+.+ +.+.+.+-..+++.-.. .. ++ -.-+.+..|+++. ++ T Consensus 222 ~s~~i~~~~~~~~~~~~~~~~~~~~~~~Gdf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~r~~~r~d~~-v~ 299 (311) T protein:vir:99 222 VSDTVNGGDEADPDDEDLDAARAVRGIVGDFA-NGIHWGVQRDIPVELIKYGDPDGQGDLKRHNQIALRLEIVYGWY-VF 299 (311) T ss_pred eecccccccccccccchhhccCcceEEEeecc-ccEEEEEecCceEEEeecCCCCcchhhhhcCcEEEEEEEeecce-ec Confidence 32211110 0011122222221211 22333333322221111 11 11 2356778899875 67 Q ss_pred CcceeeeeecC Q lcl|NC_020082. 344 YPLCAAYVDMA 354 (354) Q Consensus 344 ~P~ai~y~D~~ 354 (354) +|.+++..|-+ T Consensus 300 ~~~~v~~~~~~ 310 (311) T protein:vir:99 300 TDRFVVIENAV 310 (311) T ss_pred ChhHeeeeccc Confidence 89888888888 No 22 >protein:vir:9759 Length: 303 # NCBI annotation: putative structural protein # Family: family:all:966 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795521;genbank:gi:28876283;genbank:GeneID:1257824 Probab=98.82 E-value=3.2e-09 Score=67.14 Aligned_cols=285 Identities=9% Similarity=-0.083 Sum_probs=158.8 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |-++++. + ++.. +.+..++++...+.-..+++.++.. .+.+ +..+.+....+.+.|++.. ..+|..+...+. T Consensus 1 m~t~t~g-g-~liP--~~~~~~ii~~l~~~s~i~~l~~~~~-~~~~--~~~ip~~~~~~~a~wv~E~-~~~~~s~~~f~~ 72 (303) T protein:vir:97 1 MGTETSK-A-SLFD--KHLVSDLINKVKGHSSLAKLSSQKP-IPFN--GSKEFTFTLDSDIDVVAEN-GKKTHGGLSLEP 72 (303) T ss_pred CcccCCC-C-eEcc--hhHHHHHHHHHHhhchhhhhcceee-cCCC--ceEEEEEecCcceEEeecC-ccccccccceee Confidence 2233222 2 3333 4456778887777777787776543 2322 3455666667788999865 457888888888 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-C----ceeeeecCCccceecccc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-G----MYGLFNNPNVTLSSATKD 199 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-g----i~GLlN~p~~~~~~~~~~ 199 (354) ...+.+.++.-+.+|.+=|........++...-....++++++.+|+.+++|+... | ..|..+..+....... T Consensus 73 v~l~~~kl~~~~~iS~ell~~~~d~~~~l~~~i~~~la~a~~~~ld~a~l~G~~~~~g~~~~~~~~~~~~~~~~~~~~-- 150 (303) T protein:vir:97 73 VTIVPIKVEYGARLSDEFLYATEEEKIDILKAFNEGFAKKLARGIDLMAMHGINPRTKKASDVIGTNHFDSKVTQVVK-- 150 (303) T ss_pred EEeeeEEEEEeehhhHHHhhcCccchHHHHHHHHHHHHHHHHHHHHhhhhcccccCCccccccccccccccccccccc-- Confidence 88899999988888866444333445577788889999999999999999996432 2 2222222221111110 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeec Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRF 279 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~ 279 (354) ..+.+..++||.+++..+.. ....|..++|+|..+..|.+.. +..+.-++ .. .....+.+-+|...| T Consensus 151 --~~~~~~~~~~i~~~~~~~~~---~~~~~~~~vmn~~~~~~L~~lk--d~~g~~~~----~~--~~~~~~~~~~l~G~P 217 (303) T protein:vir:97 151 --FTESEDADANIEAAVNLIQG---AEGVVTGLAMDTEFSTALAKVT--NGEMGPKM----YP--ELAWGANPDSINGLK 217 (303) T ss_pred --cccccchHHHHHHHHHHHhh---cCCCccEEEEcHHHHHHHHHhh--ccCCCeEE----ec--CccCCCCCceeccee Confidence 11233457899999988764 2356678999999999886432 22222111 00 001112233455555 Q ss_pred eeeeccccccccccCcceEEEEEEcC-------cceEEEeeccchhcc--cc--cccCceeEEeeeeeeeeEEEECccee Q lcl|NC_020082. 280 QLDAAELAANGVSNSNKPRYMVYDKS-------DRNLAMANPIPFRML--AP--QMASLGITVPAEYKISGTEFRYPLCA 348 (354) Q Consensus 280 ~L~~~~~~~~g~g~~g~d~~v~y~~d-------~~~~~~~vp~~~~~~--~~--~~~~~~~~~~~~~~~gGv~i~~P~ai 348 (354) ...+......+....+++..+.-+.+ .+.+.+.+-...... .+ -.++ ..-+.++.|++ ..+++|.+| T Consensus 218 v~~s~~v~~~~~~~~~~~~~~~Gdf~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~n-~~~~r~~~r~~-~~v~~p~af 295 (303) T protein:vir:97 218 SSVNTTVGAGADEAESKDLVIIGDFESMFKWGYAKQIPMEIIKYGDPDNSGKDLKGYN-QIYLRAEAYIG-WGILDAKSF 295 (303) T ss_pred eEEecccCCccccCCCccEEEEeeccccEEEEEecCcEEEEeeccCCCCcchhhhhcC-cEEEEEEEEec-cEeecccce Confidence 55544333222222233332221211 122222221100000 00 0111 12345667764 778899999 Q ss_pred eeeecC Q lcl|NC_020082. 349 AYVDMA 354 (354) Q Consensus 349 ~y~D~~ 354 (354) +++-=| T Consensus 296 ~~l~~~ 301 (303) T protein:vir:97 296 ARVTKG 301 (303) T ss_pred EEeeCC Confidence 998888 No 23 >protein:vir:10364 Length: 390 # NCBI annotation: head protein; major capsid subunit precursor # Family: family:all:585 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858956;genbank:gi:32128421;genbank:GeneID:2648357 Probab=98.81 E-value=2.6e-09 Score=67.63 Aligned_cols=314 Identities=11% Similarity=0.057 Sum_probs=164.3 Q ss_pred CcccccchHH------hhh-c-cceee-----------------cCccccccccchhhhhhhhhhcCCccccchhhhhHH Q lcl|NC_020082. 1 MAIKTIDAQT------IQG-N-QWLVH-----------------KGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAF 55 (354) Q Consensus 1 ~~~~~~~~~~------~~~-~-~~~~~-----------------~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~f 55 (354) -.+..++++. ++. + .+... ................-..++.....+..+.+++.+ T Consensus 45 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (390) T protein:vir:10 45 ATVGNLSAEVQAARQRVAELEGNGAGGDVQHVSVGDLFVASEQFQASAGRWNDRSARATMNIKAALNTASTDAAGSAGAL 124 (390) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHHHHHHHHhhhhhhhhhhhHHHHHHHhhhcccccccccc Confidence 0000010000 000 0 00000 000000000000001111111112222333344444 Q ss_pred HHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEe Q lcl|NC_020082. 56 YISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGN 134 (354) Q Consensus 56 l~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~ 134 (354) +..+ +-+++++........+.++.+.+- +. .++.+..... .+.+.|++..+ .+|..+...+......+.++. T Consensus 125 ~~~~---~~~~ii~~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~a~~v~Eg~-~~~~~~~~~~~i~~~~~k~~~ 197 (390) T protein:vir:10 125 TTPN---RLPGFITQPDARLTVRDLIGSGRT-DS--ALIEYVQETGFVNNAAIVAEGA-LKPESSLKFAKKTDTTHVIAH 197 (390) T ss_pred cchh---HHHHHHHHHHhhchhhhhcceeec-cC--CceEEEEEecCCcceeeecCCc-cccccccceeEEEEeeEEEEE Confidence 5432 335677777777777777776542 22 2345555443 46778887754 478788888888899999999 Q ss_pred eeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHH Q lcl|NC_020082. 135 ECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLN 213 (354) Q Consensus 135 ~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~ 213 (354) .+.+|.+=|+.+ .++..--....+++++..+|+.+++|+... ...||+|.++....+... +....++++. T Consensus 198 ~~~is~ell~d~----~~l~~~i~~~l~~~~~~~~~~~il~G~G~~~~p~Gi~~~~~~~~~~~~~-----~~~~~~~~~~ 268 (390) T protein:vir:10 198 TMKATRQILSDA----PQLASYMNNRLIRGLKVKEDAEILRGTGANDGLLGLIPQATTYAAPTTI-----AGATRVDQLR 268 (390) T ss_pred eehhhHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccccccccccc-----cccchHHHHH Confidence 888887544332 257788888899999999999999998543 478999998765433221 1223467788 Q ss_pred HHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccccc Q lcl|NC_020082. 214 APIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN 293 (354) Q Consensus 214 ~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~ 293 (354) +++..+... ...+..++|+|+.|..|.+.. +..+.-++. . .. .+.+-++...|...+..... T Consensus 269 ~~~~~l~~~---~~~~~~~v~n~~~~~~L~~lk--d~~g~~l~~----~-~~---~~~~~~l~G~pv~~~~~~p~----- 330 (390) T protein:vir:10 269 LAMLQASLA---EYPASGIVINPIDWAAIELAK--DANNQYLIG----N-AR---GTLTPTLWGLPVVATQAMAP----- 330 (390) T ss_pred HHHHhhccc---cCCCCEEEEcHHHHHHHHHhh--cCCCceeec----C-Cc---CcCCceecceeeEEcCCCCC----- Confidence 888777642 345678999999999997533 444432221 1 11 11122455555554443221 Q ss_pred CcceEEEEEEcCcceEEEeeccchhccc----c-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 294 SNKPRYMVYDKSDRNLAMANPIPFRMLA----P-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 294 ~g~d~~v~y~~d~~~~~~~vp~~~~~~~----~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |+ .++-+.+ +.+.+.....++... . -.++ ...+.+..+++ +.+++|.+|+++++| T Consensus 331 -~~--~~~gdf~-~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~r~~~r~d-~~v~~~~a~~~~~~a 390 (390) T protein:vir:10 331 -GE--FLVGAFD-LAAQIFDQWDARVEIGYVNDDFQRN-MVTVLAEERLA-LVVYRPEALISGSFA 390 (390) T ss_pred -Cc--EEEEecc-ceEEEEEecceEEEEeecccccccC-cEEEEEEEeec-cEEeccccEEEEEeC Confidence 11 1111111 112222112222111 0 0112 24555677775 689999999999999 No 24 >protein:vir:94142 Length: 304 # NCBI annotation: ORF013 # Family: family:all:507 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240234;genbank:gi:66395898;genbank:GeneID:5133311 Probab=98.81 E-value=2.6e-09 Score=67.63 Aligned_cols=284 Identities=12% Similarity=0.004 Sum_probs=158.5 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCc Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQD 114 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~d 114 (354) ||-....... +++.+.++. +.. +.+.+.+++...+.-..++++.+..- + .....+.+....+.+.|++..+ . T Consensus 1 ma~~~~~~~~-~~~t~~gg~-lip--~~~~~~ii~~~~~~~~l~~~~~~~~~-~--~~~~~ip~~~~~~~a~~v~E~~-~ 72 (304) T protein:vir:94 1 MATPTYTPGN-VILSDFKNG-VIP--AEQGTLIMKDIMANSAIMKLAKNEPM-T--AQKKKFTYLAKGVGAYWVSETE-R 72 (304) T ss_pred Cccccccccc-ccccCCCce-ecc--hhHHHHHHHHHHhccchhhhcceeec-c--CCceEEEEEeCCcceEEeecCc-c Confidence 4444432222 222233333 333 34567788877777777777766432 2 2334566666777888888764 4 Q ss_pred cceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccce Q lcl|NC_020082. 115 LPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLS 194 (354) Q Consensus 115 ip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~ 194 (354) +|..+...+......+.++..+.++.+=++.+ ..++...-....++++++.+|+.+++|+...+-.|.+....++.. T Consensus 73 ~~~~~~~~~~i~~~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~l~~~ia~~~d~~~l~G~g~~~~~~~~~~~~~~~~ 149 (304) T protein:vir:94 73 IQTSKPEYAQAEMEAKKIGVIIPLSKEFLKWT---AKDFFNEVKPLIAEAFYKAFDQAVIFGTKSPYNTSTSGKPLVEGA 149 (304) T ss_pred cccccceeeEEEEEEEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHhhheeccCCCcccccccccccccc Confidence 78777888888889999998888877544433 467888888899999999999999999876555555444433322 Q ss_pred eccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccce Q lcl|NC_020082. 195 SATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELD 274 (354) Q Consensus 195 ~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~ 274 (354) ....... .+....+++|.+++.++... ...+..++|+|+.|..|.+.. +..+.-++ ..+ +-+ T Consensus 150 ~~~~~~~-~~~~~~~~~i~~~~~~l~~~---~~~~~~~v~~~~~~~~L~~lk--d~~G~~l~----~~~--------~~~ 211 (304) T protein:vir:94 150 EEKGNVV-TDTNNLYVDLSALMATIEDE---ELDPNGVLTTRSFRSKMRNAL--DANDRPLF----DAN--------GNE 211 (304) T ss_pred ccccccc-ccccchHHHHHHHHHHhhhc---cCCcCEEEEcHHHHHHHHHhh--ccCCcEee----cCC--------Ccc Confidence 2111111 12334588899998888642 345668999999999996532 33332211 001 112 Q ss_pred EEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccc----------c-ccc----C-c---eeEEeeee Q lcl|NC_020082. 275 IQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLA----------P-QMA----S-L---GITVPAEY 335 (354) Q Consensus 275 I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~----------~-~~~----~-~---~~~~~~~~ 335 (354) +...|......... ..++. .+.+- |.+++.+..-..++.-. - ... + . ...+.++. T Consensus 212 l~G~PV~~~~~~~~----~~~~~-~~~~g-d~~~~~~~~~~~~~i~~~~e~~~~~~~~~~~~g~~~~~f~~~~~~~r~~~ 285 (304) T protein:vir:94 212 IMGLPLSYTGADVY----DKKKS-LALMG-DWDYARYGILQGIEYAISEDATLTTLQASDASGQPVSLFERDMFALRATM 285 (304) T ss_pred ccceeeEEeccccc----CCCCc-EEEEE-ehhhEEEEEecceEEEEeecceeeeecccccCccchhhhhcCcEEEEEEE Confidence 22233322221111 01111 11121 11112121111111100 0 000 0 1 24456677 Q ss_pred eeeeEEEECcceeeeeecC Q lcl|NC_020082. 336 KISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 336 ~~gGv~i~~P~ai~y~D~~ 354 (354) |++ ..+++|.+|+.+--| T Consensus 286 r~~-~~v~~~~a~~~l~~a 303 (304) T protein:vir:94 286 HIA-YMNVKPEAFATLKPT 303 (304) T ss_pred Eec-cEeecccceEEEEec Confidence 775 667779999999888 No 25 >protein:vir:105905 Length: 304 # NCBI annotation: major capsid protein # Family: family:all:507 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004375;genbank:gi:122891830;genbank:GeneID:4712376 Probab=98.81 E-value=2.6e-09 Score=67.63 Aligned_cols=284 Identities=12% Similarity=0.004 Sum_probs=158.5 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCc Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQD 114 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~d 114 (354) ||-....... +++.+.++. +.. +.+.+.+++...+.-..++++.+..- + .....+.+....+.+.|++..+ . T Consensus 1 ma~~~~~~~~-~~~t~~gg~-lip--~~~~~~ii~~~~~~~~l~~~~~~~~~-~--~~~~~ip~~~~~~~a~~v~E~~-~ 72 (304) T protein:vir:10 1 MATPTYTPGN-VILSDFKNG-VIP--AEQGTLIMKDIMANSAIMKLAKNEPM-T--AQKKKFTYLAKGVGAYWVSETE-R 72 (304) T ss_pred Cccccccccc-ccccCCCce-ecc--hhHHHHHHHHHHhccchhhhcceeec-c--CCceEEEEEeCCcceEEeecCc-c Confidence 4444432222 222233333 333 34567788877777777777766432 2 2334566666777888888764 4 Q ss_pred cceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccce Q lcl|NC_020082. 115 LPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLS 194 (354) Q Consensus 115 ip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~ 194 (354) +|..+...+......+.++..+.++.+=++.+ ..++...-....++++++.+|+.+++|+...+-.|.+....++.. T Consensus 73 ~~~~~~~~~~i~~~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~l~~~ia~~~d~~~l~G~g~~~~~~~~~~~~~~~~ 149 (304) T protein:vir:10 73 IQTSKPEYAQAEMEAKKIGVIIPLSKEFLKWT---AKDFFNEVKPLIAEAFYKAFDQAVIFGTKSPYNTSTSGKPLVEGA 149 (304) T ss_pred cccccceeeEEEEEEEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHhhheeccCCCcccccccccccccc Confidence 78777888888889999998888877544433 467888888899999999999999999876555555444433322 Q ss_pred eccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccce Q lcl|NC_020082. 195 SATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELD 274 (354) Q Consensus 195 ~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~ 274 (354) ....... .+....+++|.+++.++... ...+..++|+|+.|..|.+.. +..+.-++ ..+ +-+ T Consensus 150 ~~~~~~~-~~~~~~~~~i~~~~~~l~~~---~~~~~~~v~~~~~~~~L~~lk--d~~G~~l~----~~~--------~~~ 211 (304) T protein:vir:10 150 EEKGNVV-TDTNNLYVDLSALMATIEDE---ELDPNGVLTTRSFRSKMRNAL--DANDRPLF----DAN--------GNE 211 (304) T ss_pred ccccccc-ccccchHHHHHHHHHHhhhc---cCCcCEEEEcHHHHHHHHHhh--ccCCcEee----cCC--------Ccc Confidence 2111111 12334588899998888642 345668999999999996532 33332211 001 112 Q ss_pred EEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccc----------c-ccc----C-c---eeEEeeee Q lcl|NC_020082. 275 IQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLA----------P-QMA----S-L---GITVPAEY 335 (354) Q Consensus 275 I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~----------~-~~~----~-~---~~~~~~~~ 335 (354) +...|......... ..++. .+.+- |.+++.+..-..++.-. - ... + . ...+.++. T Consensus 212 l~G~PV~~~~~~~~----~~~~~-~~~~g-d~~~~~~~~~~~~~i~~~~e~~~~~~~~~~~~g~~~~~f~~~~~~~r~~~ 285 (304) T protein:vir:10 212 IMGLPLSYTGADVY----DKKKS-LALMG-DWDYARYGILQGIEYAISEDATLTTLQASDASGQPVSLFERDMFALRATM 285 (304) T ss_pred ccceeeEEeccccc----CCCCc-EEEEE-ehhhEEEEEecceEEEEeecceeeeecccccCccchhhhhcCcEEEEEEE Confidence 22233322221111 01111 11121 11112121111111100 0 000 0 1 24456677 Q ss_pred eeeeEEEECcceeeeeecC Q lcl|NC_020082. 336 KISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 336 ~~gGv~i~~P~ai~y~D~~ 354 (354) |++ ..+++|.+|+.+--| T Consensus 286 r~~-~~v~~~~a~~~l~~a 303 (304) T protein:vir:10 286 HIA-YMNVKPEAFATLKPT 303 (304) T ss_pred Eec-cEeecccceEEEEec Confidence 775 667779999999888 No 26 >protein:vir:80684 Length: 315 # NCBI annotation: gp6 # Family: family:all:966 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285582;genbank:gi:148727088;genbank:GeneID:5247055 Probab=98.80 E-value=1.6e-09 Score=68.74 Aligned_cols=289 Identities=11% Similarity=-0.015 Sum_probs=155.3 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |...+.+.+.++.. +.+..+|++.....-..|++..+..- ......+.+....+.+.|++.. ..+|..+...+. T Consensus 1 Ma~~~~~~gg~~vP--~~~~~~ii~~l~~~s~i~~l~~~i~~---~~~~~~ip~~~~~~~a~wv~Eg-~~~~~s~~~f~~ 74 (315) T protein:vir:80 1 MADDFLSAGKLELP--GSMIGAVRDRAIDSGVLAKLSPEQPT---IFGPVKGAVFSGVPRAKIVGEG-EVKPSASVDVSA 74 (315) T ss_pred CCCCcCCcCceEcc--hHHHHHHHHHHHhhchhhhhcceeec---CCCceEEEEEeCCcceEEeeCC-ccccccccceee Confidence 33333333333443 45567788877777777776655422 2234567777777888999876 457877888888 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCC-CcchHHHHHHHHHHHHHhhheeeeeehhh---CceeeeecCCccceeccccc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNM-PIDAEQARLAFRGAEEHSQSVAYFGDSSR---GMYGLFNNPNVTLSSATKDY 200 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~-~ld~~k~~aA~~~~~~~~n~~~f~G~~~~---gi~GLlN~p~~~~~~~~~~w 200 (354) .....+.++.-..+|.+=++.....-. .|...-.+..++++++.+|+.+|+|.... +..|+.+.-+.... T Consensus 75 v~l~~~kl~~~~~iS~ell~~s~~~~~~~l~~~i~~~la~ai~~~~d~a~~~G~~~~~~~~~~~~~~~~~~~~~------ 148 (315) T protein:vir:80 75 FTAQPIKVVTQQRVSDEFMWADADYRLGVLQDLISPALGASIGRAVDLIAFHGIDPATGKAASAVHTSLNKTKN------ 148 (315) T ss_pred eEeeeeeEEeeehhhHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHhhheeeccCCCCCccccccccccccccc------ Confidence 888888888877777654433221111 25566678889999999999999996432 33343332111110 Q ss_pred cccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeece Q lcl|NC_020082. 201 KTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQ 280 (354) Q Consensus 201 ~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~ 280 (354) ........++||.+++..+... +...+...+|+|..+..|.+-......+ +.-.++.. . ...+.+-++...|. T Consensus 149 ~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~imn~~~~~~L~~l~~~~g~~-~~g~~~~~-~---~~~g~~~tl~G~PV 221 (315) T protein:vir:80 149 IVDATDSATADLVKAVGLIAGA--GLQVPNGVALDPAFSFALSTEVYPKGSP-LAGQPMYP-A---AGFAGLDNWRGLNV 221 (315) T ss_pred eeeccccchHHHHHHHHHHhhc--cCccceEEEEcHHHHHHHHHHhhccCCc-cccccccc-c---cccCCCceecceee Confidence 1112334568888888777532 3445678999999999986543221111 11111110 0 00122234555555 Q ss_pred eeeccccccc-cccCcceEEEEEEcC------cceEEEeeccchhcccccccCc----eeEEeeeeeeeeEEEECcceee Q lcl|NC_020082. 281 LDAAELAANG-VSNSNKPRYMVYDKS------DRNLAMANPIPFRMLAPQMASL----GITVPAEYKISGTEFRYPLCAA 349 (354) Q Consensus 281 L~~~~~~~~g-~g~~g~d~~v~y~~d------~~~~~~~vp~~~~~~~~~~~~~----~~~~~~~~~~gGv~i~~P~ai~ 349 (354) +.+....... .+...+..++.-+.+ .+.+.+.+-..-... -...++ ...+.+..++ |..|++|.+|+ T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~GDfs~~~~g~~~~~~i~i~~~~~~~-~~~~~~~~~~~v~~r~~~r~-~~~v~~~~a~~ 299 (315) T protein:vir:80 222 GASSTVSGAPEMSPASGVKAIVGDFSRVHWGFQRNFPIELIEYGDPD-QTGRDLKGHNEVMVRAEAVL-YVAIESLDSFA 299 (315) T ss_pred EecCcCCcccccccccccEEEEeecccEEEEEecCeeEEEecccccc-CcccchhhcCcEEEEEEEEe-cceeecccceE Confidence 4443322111 111112222222222 122222221100000 001111 2455667776 58899999999 Q ss_pred eeecC Q lcl|NC_020082. 350 YVDMA 354 (354) Q Consensus 350 y~D~~ 354 (354) ++..+ T Consensus 300 ~l~~~ 304 (315) T protein:vir:80 300 VVKEK 304 (315) T ss_pred EEeec Confidence 99877 No 27 >protein:vir:7771 Length: 330 # NCBI annotation: gp17 # Family: family:all:507 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817605;genbank:gi:29566035;genbank:GeneID:1259229 Probab=98.80 E-value=2.8e-09 Score=67.47 Aligned_cols=295 Identities=10% Similarity=-0.019 Sum_probs=167.3 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCc Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQD 114 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~d 114 (354) ||.+-.......+. .+++.++..+ +-.++++...+....++++++.. .+. ....+.+....+.+.|++.. .. T Consensus 1 m~~~~~~a~~~~~t-~~~g~~i~~~---~~~~ii~~~~~~s~l~~~~~~~~-~~~--~~~~~p~~~~~~~a~~v~Eg-~~ 72 (330) T protein:vir:77 1 MAGSTVPSTQVALT-GDFSAFLTPE---QSQDYFAEIEKTSIVQRIARKVP-MGP--TGISIPHWTGAVSASWTGEA-ER 72 (330) T ss_pred Ccccccchhhcccc-CCCcceechh---HHHHHHHHHHhccchhhhcceee-ccC--CceEEEEEcCCcceeEecCC-Cc Confidence 33333211111222 2334455543 23457777777777777777643 222 23556677677788888764 55 Q ss_pred cceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccc Q lcl|NC_020082. 115 LPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTL 193 (354) Q Consensus 115 ip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~ 193 (354) +|..+...+......+.++.-..++.+=|+.. ..++...-....++++++.+|+.+|+|+.. .+..|+++...... T Consensus 73 ~~~~~~~f~~i~~~~~k~~~~~~is~ell~ds---~~~~~~~i~~~l~~ai~~~~~~~~l~G~g~~~~~~g~~~~~~~~~ 149 (330) T protein:vir:77 73 KPITKGSFGKQELEPVKITTIFAESAEVVRLN---PLNYLNTMRTKIAEAIALKFDAAAIHGIDKPSAFKGYLAETTKVV 149 (330) T ss_pred cccccceeeEEEEeEEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccccccccccccc Confidence 78777778888889999998888887655443 457888888999999999999999999864 46679988764322 Q ss_pred eeccccc--cccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHH-HHhcCceeeccc Q lcl|NC_020082. 194 SSATKDY--KTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQH-FMEANSYTLLTG 270 (354) Q Consensus 194 ~~~~~~w--~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~-l~~n~~~~~~~g 270 (354) ....... .+.+....+++|.+++..+... ...+..++|+|..+..|.+-. +..+.-++.- +....+. .. T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~vmn~~~~~~l~~lk--d~~G~~l~~~~~~~~~~~---~~ 221 (330) T protein:vir:77 150 SLADTNLTTASGPQGNAYLAVNNALSLLVNS---GKKWTGTLLDNVTEPILNTAV--DGNGRPLFVESTYTEQVG---AI 221 (330) T ss_pred eeecccccccccccchhHHHHHHHHHhhhhc---CCCccEEEEcHHHHHHHHHHh--ccCCceeecCcccccccc---cc Confidence 2111111 1233556788999998887653 235568999999999986532 3333222110 0000000 01 Q ss_pred ccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccc--------------------c--cccCce Q lcl|NC_020082. 271 NELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLA--------------------P--QMASLG 328 (354) Q Consensus 271 ~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~--------------------~--~~~~~~ 328 (354) .+.++...|......... + .++++..++.-+.+. +.+.....++... . -.++ . T Consensus 222 ~~~~l~G~PV~~~~~~p~-~-~~~~~~~~~~gd~s~--~~i~~~~~~~i~~~~e~~~~~~~~~~~~~~~~~~~~f~~~-~ 296 (330) T protein:vir:77 222 REGRILGRPTYVADNVVN-G-TVGNRVVGVMGDFSQ--VIWGQIGGLSFDVTDQATLDFGEEQGGVWVPKLISLWQHN-M 296 (330) T ss_pred CCceecceeeEEeccccC-C-CCCCccEEEEEecce--EEEEEecCcEEEEeecceeeecccccccccccccchhhcC-c Confidence 122344444444433221 1 112222222222221 1121111111110 0 0122 2 Q ss_pred eEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 329 ITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 329 ~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+.+..+++ +.+++|.|++++..+ T Consensus 297 ~~~r~~~r~d-~~v~~~~a~~~i~~~ 321 (330) T protein:vir:77 297 VAVRCEAEFA-FMVNDKDAFVKLTDQ 321 (330) T ss_pred EEEEEEEEec-cEEecccceEEEEec Confidence 5667888886 666889999999988 No 28 >protein:vir:104256 Length: 458 # NCBI annotation: major head protein precursor # Family: family:all:27070 # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006977;genbank:gi:46401878;genbank:GeneID:2777673 Probab=98.78 E-value=1.1e-09 Score=69.81 Aligned_cols=321 Identities=7% Similarity=-0.083 Sum_probs=160.8 Q ss_pred CcccccchH------Hhh----hccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 1 MAIKTIDAQ------TIQ----GNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYET 70 (354) Q Consensus 1 ~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~ 70 (354) ...+..+.. ..+ .++++. .+.. . .........+. ....+ .+.+.++.. +.+.+.|++. T Consensus 118 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~----~-~~~~~~~~~a~--~~~~~--~~~g~~~ip--~~~~~~ii~~ 185 (458) T protein:vir:10 118 SVAKALYGTQENFEDEVEKLVLLSYVME-KGVF----E-TEHGQRHLKAV--NQSSS--VEVSSESYE--TIFSQRIIRD 185 (458) T ss_pred hhhccchhhhhhHHHHHHHHHHHHHHHh-hccc----h-hhhhhhhhhhh--hhccc--Cccccceeh--hhHhHHHHHH Confidence 000000000 000 000000 0000 0 00000011111 00111 122333333 4567778887 Q ss_pred hhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc------eeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 71 PYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP------RVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 71 ~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip------~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) .......++++.+.. .+. ....+.+....+.+.|++.... .| ..+...+......+.++..+.+|..=|+ T Consensus 186 ~~~~~~l~~~~~~~~-~~~--~~~~~~~~~~~~~a~~v~e~~~-~~~~~~~~~~~~~~~~i~~~~~k~~~~v~is~ell~ 261 (458) T protein:vir:10 186 LQKELVVGALFEELP-MSS--KILTMLVEPDAGKATWVAASTY-GTDTTTGEEVKGALKEIHFSTYKLAAKSFITDETEE 261 (458) T ss_pred HHhhhhHHhhcceee-cCC--cceEEEEecCCcceeecccccc-cccccccccccccceeeEeeeeeEEeeehhhHHHHh Confidence 777777777765532 222 2344444445566777765432 22 1223455666777888887788766444 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHH-HHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQ-ELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~-ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....+.++...+|+.+++|+......|++|+++....+....++...+. --+++|.+++..+... T Consensus 262 ds---~~~~~~~i~~~l~~~i~~~~d~~~l~G~G~~~p~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~- 337 (458) T protein:vir:10 262 DA---IFSLLPLLRKRLIEAHAVSIEEAFMTGDGSGKPKGLLTLASEDSAKVVTEAKADGSVLVTAKTISKLRRKLGRH- 337 (458) T ss_pred cc---hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceeeecccccccceeecccccccccccHHHHHHHHHhhhhh- Confidence 33 246777788889999999999999999977778999999986543333222221111 1256777777777532 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) ...+..++|+|..|..|..-. +..+.-++.....+. ...|.+.++...|......... +.+..+.. +- T Consensus 338 --~~~~~~~v~~~~~~~~l~~lk--d~~G~~i~~~~~~~~---~~~~~~~~l~G~pv~~~~~~p~---~~~~~~~~--~~ 405 (458) T protein:vir:10 338 --GLKLSKLVLIVSMDAYYDLLE--DEEWQDVAQVGNDSV---KLQGQVGRIYGLPVVVSEYFPA---KANSAEFA--VI 405 (458) T ss_pred --hcCCCEEEEcHHHHHHHHhhc--ccCCceeeccccccc---cccCcCceecceeeEEcccccc---ccCCcceE--EE Confidence 235678999999999886432 333322211111111 1234444555566655543321 11112222 21 Q ss_pred cCcceEEEeeccchhcccccccCc-eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAPQMASL-GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~~~~~~-~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .-.+.+.+..-..++...-..... ...+-...|+ |..+++|.+|++...| T Consensus 406 ~f~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~r~-~~~v~~~~a~v~~~~a 456 (458) T protein:vir:10 406 VYKDNFVMPRQRAVTVERERQAGKQRDAYYVTQRV-NLQRYFANGVVSGTYA 456 (458) T ss_pred EecccEEEEEeeceEEEeecccCCCceEEEEEEEe-cceEecccceEEEeec Confidence 112223232222233221111111 2345556776 5888999999999999 No 29 >protein:vir:41 Length: 299 # NCBI annotation: major capsid protein # Family: family:all:507 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463467;swissprot:trembl:q9t1b7;genbank:gi:16798789;uniprot:Q9T1B7;genbank:GeneID:922353 Probab=98.78 E-value=5.3e-09 Score=65.94 Aligned_cols=277 Identities=7% Similarity=-0.049 Sum_probs=161.3 Q ss_pred hcCCccccch-hhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCcccee Q lcl|NC_020082. 40 IGNPNVMLDA-DGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRV 118 (354) Q Consensus 40 ~~~~~~~~dA-~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v 118 (354) ++..+..... +.++. +.. +.+..++++.....-..+++..+.. .+.+. ..+..... ..+.|++.. ..+|.. T Consensus 1 ~g~~a~~~~~~~~~~~-~iP--~~~~~~ii~~~~~~s~l~~~~~~~~-~~~~~--~~~~~~~~-~~a~~v~E~-~~~~~~ 72 (299) T protein:vir:41 1 MGFNPDTTTMQSAKTG-SIP--INISEQIITGVKNGSAAMKLAKAVP-MTKPE--EEFTFMSG-VGAFWVDEA-ERIQTS 72 (299) T ss_pred CCcCCCcccccCCCce-ecc--hhHHHHHHHHHHhcchhhhhceeee-cCCCc--EEEEEEcC-CceeeeecC-cccccc Confidence 3333222222 22222 232 4566778887777777777766533 33333 33344443 457788764 557877 Q ss_pred eeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccc Q lcl|NC_020082. 119 AQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATK 198 (354) Q Consensus 119 ~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~ 198 (354) +...+........++.-+.++.+=++.+ ..++...-....++++++.+|+.+++|+....-.|+++........+.. T Consensus 73 ~~~f~~v~l~~~k~~~~~~is~ell~ds---~~~~~~~i~~~l~~a~~~~~d~a~l~G~g~~~~~gil~~~~~~~~~~~~ 149 (299) T protein:vir:41 73 KPTFTKAKMRSKKMGVIIPTTKENLNYS---VTNFFSLMQAEIVEAFYKKFDQAVFTGVESPYNWNILKSATDASNLVEE 149 (299) T ss_pred ccceeEEEEeeEEEEEeehhhHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccccccccceeecc Confidence 8888888999999999999987655533 3578888899999999999999999999776667888765432222221 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee Q lcl|NC_020082. 199 DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 199 ~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~ 278 (354) . + .-++||.+++.++... ...+..++++|..|..|.+.. +..+.-++. ..+ ..+. -.+... T Consensus 150 ~--~----~~~~~l~~~~~~l~~~---~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~----~~~---~~~~-~~l~G~ 210 (299) T protein:vir:41 150 T--A----NKYDDLNEAIGLIEAE---DLEPNGIATIRKQRVKYRSTK--DGNGMPIFN----TAT---SNGV-DDVLGL 210 (299) T ss_pred c--c----ccHHHHHHHHHhhhcc---cCCcCEEEEcHHHHHHHHHhh--ccCCceeec----CCc---CCCC-ceecce Confidence 1 1 1268889998887642 345678999999999997533 333332211 111 0111 245555 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccccc------------------ccCceeEEeeeeeeeeE Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ------------------MASLGITVPAEYKISGT 340 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~------------------~~~~~~~~~~~~~~gGv 340 (354) |...+..... + +.+..+.+- |-..+.+..-+.++..... .++ ...+.+..++ |. T Consensus 211 PV~~~~~~~~---~--~~~~~~~~g-dfs~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~-d~ 282 (299) T protein:vir:41 211 PIAYTPKYTF---G--DKDISELVG-DWNQAYYGILRGVEYEILTEATLTTVADETGKPLNLAERD-MAAIKATFEV-GF 282 (299) T ss_pred eeEEecccCC---C--CCceEEEEE-ecccEEEEEecCcEEEEeecccccccccccccchhhhhcC-cEEEEEEEEe-cc Confidence 5555443321 1 111122221 1111222222222221110 111 2455677887 57 Q ss_pred EEECcceeeeeecC Q lcl|NC_020082. 341 EFRYPLCAAYVDMA 354 (354) Q Consensus 341 ~i~~P~ai~y~D~~ 354 (354) .+++|.||+.+-.+ T Consensus 283 ~v~~~~A~~~l~~~ 296 (299) T protein:vir:41 283 MVVKDEAFSAVQPK 296 (299) T ss_pred EEecccceEEEEec Confidence 78889999999888 No 30 >protein:vir:97053 Length: 390 # NCBI annotation: putative head protein # Family: family:all:585 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453565;genbank:gi:84662600;genbank:GeneID:5142468 Probab=98.77 E-value=4.1e-09 Score=66.54 Aligned_cols=314 Identities=11% Similarity=0.057 Sum_probs=160.4 Q ss_pred CcccccchHHhh----------hcccee---------------ecCccccccccchhhhhhhhhhcCCccccchhhhhHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ----------GNQWLV---------------HKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAF 55 (354) Q Consensus 1 ~~~~~~~~~~~~----------~~~~~~---------------~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~f 55 (354) -.+..++.+.-+ ...... +.....+..........-..+......+....+++.. T Consensus 45 ~e~~~l~~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 124 (390) T protein:vir:97 45 ATVGNLSAEVQAARQRVAELEGNGAGGDVQHVSVGDMFVASEQFQASTGRWNDRSARATMNIKAALNTASTDAAGSAGAL 124 (390) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHhhhhhhhhhhHHHHHHHhhhcccccccccc Confidence 001111110000 000000 0000000000000000001111111112222333333 Q ss_pred HHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEe Q lcl|NC_020082. 56 YISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGN 134 (354) Q Consensus 56 l~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~ 134 (354) +.. .+.+.+++.....-..+.++++..- +.+ .+.+..... .+.+.|++.. ..+|..+...+......+.++. T Consensus 125 ip~---~~~~~ii~~~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~~~~~a~~v~Eg-~~~~~~~~~~~~i~~~~~k~~~ 197 (390) T protein:vir:97 125 TTP---NRLPGFITPPDARLTVRDLIGSGRT-DSA--LIEYVQETGFVNNAAIVAEG-ALKPESSLKFAKKTDTTHVIAH 197 (390) T ss_pred cch---hhhHHHHHHHhhhhhhHhhcceeec-cCC--ceEEEEEecCCcceeeecCC-ccccccccceeEEEEeeeeEEE Confidence 332 3445677777777777777665432 222 344555433 4677888765 4478777788888889999998 Q ss_pred eeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHH Q lcl|NC_020082. 135 ECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLN 213 (354) Q Consensus 135 ~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~ 213 (354) -..++.+=++.+ .++..--....++++++.+|+.+|+|+... ...||+|.++....... .+.+..+++|. T Consensus 198 ~~~is~ell~ds----~~l~~~i~~~la~a~~~~~d~a~l~G~g~~~~p~Gi~~~~~~~~~~~~-----~~~~~~~d~~~ 268 (390) T protein:vir:97 198 TMKATRQILSDA----PQLASYMNNRLIRGLKVKEDAEILRGTGANDGLLGLIPQATTYAAPTT-----IAGATRVDQLR 268 (390) T ss_pred eehhhHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccceeecccccccccc-----ccccchHHHHH Confidence 888887533322 257777788899999999999999998544 47899998875543222 22334467888 Q ss_pred HHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccccc Q lcl|NC_020082. 214 APIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN 293 (354) Q Consensus 214 ~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~ 293 (354) +++..+.. ....+..++|+|..|..|.+-. +..|.-++. . . ..+.+-.+...|...+..... T Consensus 269 ~~~~~~~~---~~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~----~-~---~~~~~~~l~G~pV~~~~~~~~----- 330 (390) T protein:vir:97 269 LAMLQASL---AEYPASGIVINPIDWAAIELAK--DANNQYLIG----N-A---RGTLTPTLWGLPVVATQAMAP----- 330 (390) T ss_pred HHHHhhcc---ccCCCCEEEEcHHHHHHHHHhh--cCCCceeec----C-c---cCCCCceecceeeEEcCCCCC----- Confidence 88877754 2346678999999999997543 434432221 1 0 111122344444444332211 Q ss_pred CcceEEEEEEcCcceEEEeeccchhcccc-----cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 294 SNKPRYMVYDKSDRNLAMANPIPFRMLAP-----QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 294 ~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-----~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++ .++.+.+ +.+.+...+.++.... -.+++ ....+..++ |..+++|.+++++++| T Consensus 331 -~~--~~~gd~~-~~~~~~~~~~~~i~~~~~~~~f~~~~-~~~r~~~r~-d~~v~~~~a~v~~~~a 390 (390) T protein:vir:97 331 -GE--FLVGAFD-LAAQIFDQWDARVEIGYVNDDFQRNM-VTVLAEERL-ALVVYRPEALITGSFA 390 (390) T ss_pred -Cc--EEEEecc-ceEEEEEecceEEEEeecccccccCc-EEEEEEEee-ccEEeccccEEEEEeC Confidence 11 1111111 1122222222222111 01222 234455665 5789999999999999 No 31 >protein:vir:1638 Length: 298 # NCBI annotation: Structural protein # Family: family:all:966 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695059;genbank:gi:23455750;genbank:GeneID:955469 Probab=98.77 E-value=3.2e-09 Score=67.16 Aligned_cols=281 Identities=9% Similarity=-0.021 Sum_probs=161.2 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCc Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQD 114 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~d 114 (354) || + +++..+- +.+..++++.....-..+++.++.. .+.+ ...+.+....+.+.|++.. .. T Consensus 1 ma----------~---~gG~lvp---~~~~~~ii~~~~~~s~i~~l~~~~~-~~~~--~~~ip~~~~~~~a~~v~E~-~~ 60 (298) T protein:vir:16 1 MV----------L---NKGTLFD---PTLVTDLISKVAGKSSIARLSAQKP-IPFN--GEKVFTFTMDSEIDVVAES-GK 60 (298) T ss_pred Cc----------c---cCcceec---hhHHHHHHHHHHhhhhhhhhcceee-ccCC--ceEEEEEecCcceEEecCC-cc Confidence 22 1 1222222 2345667777777777777776543 2222 2455666677888999765 56 Q ss_pred cceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-----hCceeeeecC Q lcl|NC_020082. 115 LPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-----RGMYGLFNNP 189 (354) Q Consensus 115 ip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-----~gi~GLlN~p 189 (354) +|..+...+......+.++.-..+|.+=|........++...-+...++++++.+|+.+++|... .+..|+.... T Consensus 61 ~~~~~~~f~~v~l~~~k~a~~~~iS~ell~~s~d~~~~l~~~i~~~la~ai~~~~d~~~l~G~~~~~g~~~~~~~~~~~~ 140 (298) T protein:vir:16 61 KTHGGVTLAPQTMVPIKVEYGARISDEFMYASDEEKINILQEFNDGFAKKVARGIDLMAFHGVNPRLGTASAVIGTNHFD 140 (298) T ss_pred ccccccceeEEEEeeeeEEEeehhhHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcccccccccccc Confidence 88888888888889999998888887666554445567777888999999999999999999531 2344443333 Q ss_pred CccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecc Q lcl|NC_020082. 190 NVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLT 269 (354) Q Consensus 190 ~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~ 269 (354) +........ . ......+++|.+++.++... ...+..++|+|..+..|.+. -+..+.-++.-. ... T Consensus 141 ~~~~~~~~~--~-~~~~~~~~~i~~~~~~~~~~---~~~~~~~vmn~~~~~~l~~l--kd~~G~~i~~~~-------~~~ 205 (298) T protein:vir:16 141 SKVTQKVEA--P-RGIADPNGAIENAVELLTGV---DADVTGIAINPSFRSALAKQ--KDLQDNALFPEL-------KWG 205 (298) T ss_pred ccccccccc--c-cccccHHHHHHHHHHHhhhc---CCCccEEEEcHHHHHHHHHh--hccCCCeeecCc-------ccC Confidence 322111111 1 11234578899999887642 34566899999999998653 244443332111 012 Q ss_pred cccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccch--hcccc-ccc----Cc----eeEEeeeeeee Q lcl|NC_020082. 270 GNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPF--RMLAP-QMA----SL----GITVPAEYKIS 338 (354) Q Consensus 270 g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~--~~~~~-~~~----~~----~~~~~~~~~~g 338 (354) +.+-++...|.......... ...+++.+++-+.+ +.+.+.+...+ ...+. ... ++ -.-+.++.++ T Consensus 206 ~~~~~l~G~PV~~~~~v~~~--~~~~~~~~~~GDfs-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~v~~ra~~r~- 281 (298) T protein:vir:16 206 ATPDTINGLPVDVNKTVSDM--SLTQRDRAIIGDFA-NGFKWGYAKEVPLEVIQYGDPDNSGLDLKGYNQVYIRAELFL- 281 (298) T ss_pred CCCceecceeeEEecccccc--cCCCccEEEEeecc-ceEEEEEecCceEEEeeccCCcCcchhhhhcCcEEEEEEEEE- Confidence 33335555555544433221 22334444432322 21222222211 11111 000 00 1234556666 Q ss_pred eEEEECcceeeeeecC Q lcl|NC_020082. 339 GTEFRYPLCAAYVDMA 354 (354) Q Consensus 339 Gv~i~~P~ai~y~D~~ 354 (354) |..+++|.+++++--| T Consensus 282 d~~v~~~~a~~~l~~a 297 (298) T protein:vir:16 282 GWGILDATKFARVTEA 297 (298) T ss_pred ccEeecccceEEEeec Confidence 5889999999999999 No 32 >protein:vir:81227 Length: 413 # NCBI annotation: gp6, major capsid protein # Family: family:all:585 # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456736;genbank:gi:157168379;hssp:P49861;interpro:IPR006444;uniprot:Q9MBJ9;genbank:GeneID:5580350 Probab=98.71 E-value=4.3e-09 Score=66.45 Aligned_cols=319 Identities=10% Similarity=0.008 Sum_probs=157.3 Q ss_pred CcccccchHHhh-------hccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhc Q lcl|NC_020082. 1 MAIKTIDAQTIQ-------GNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYG 73 (354) Q Consensus 1 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~ 73 (354) ...+++..+..+ ...+....+..... ... .-+.+.............+..+.. +.+.+.+++.... T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~vp--~~~~~~ii~~~~~ 144 (413) T protein:vir:81 72 EGYKSIGEFFAKRAGDQIKQQAGGAQLNYSVGE---YVA--PRVKAASDPASTATLTDEFQGGYG--TTWNRNIIYRRRE 144 (413) T ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHhhhhhhh---hhh--hHHHhhhhhhhhcccccccccccc--hhhHHHHHHHHhh Confidence 000110000000 00000000000000 000 001111111111111111222333 5577889998888 Q ss_pred cccchhhccccCCCCCceeeEEEeeec----ccCceeEecCCCCccceeee-ccceeEEEEEEEEeeeeecHHHHHHHHH Q lcl|NC_020082. 74 DITYRSDVPMAANIPEYADTWMYRSYD----GVTMGKFIGANGQDLPRVAQ-SAQMHTVPLGYAGNECHYTLDEMRKSAA 148 (354) Q Consensus 74 ~l~~r~~v~v~~~~~~~~~~~~~~~~~----~~G~a~~~~~~~~dip~v~~-~~~~~~~pv~~~~~~~~~~~~El~~a~~ 148 (354) ....++++++..-.+ .+..|.+.. ..+.+.|++..+. +|..+. .++....+++.++..+.+|.+=|+.+. T Consensus 145 ~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~v~Eg~~-~~~~~~~~f~~i~~~~~k~~~~~~iS~ell~ds~- 219 (413) T protein:vir:81 145 KLVVADLMDNLTMTN---TTIKYLMEKANRVVEGGFKTVAEGGK-KPYMRFADFDIVTESLSKIAGLTKITDEMIEDYD- 219 (413) T ss_pred hhhHHhhcceeeccC---CceeEEEeccccccccccceecCccc-ccccCcccceeeEeeeeeEEEeehhhHHHHHHHH- Confidence 888888877643322 223333322 2345677776533 565553 567788888998888889876444332 Q ss_pred hCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc Q lcl|NC_020082. 149 MNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH 227 (354) Q Consensus 149 ~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~ 227 (354) .|..--....++++++.+|+.+++|+... ...||++.+++......+ .+..++++.+++..+... ... T Consensus 220 ---~l~~~i~~~la~~~~~~~d~~~l~G~G~~~~~~Gi~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~--~~~ 288 (413) T protein:vir:81 220 ---FLVSYINARLLEELAIEEERQLLLGDGTGNNLTGLLKRDGIQTLAVSN------KDELADSIYKAMTNISLA--TPF 288 (413) T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhccCCCCCcccccccccccccccccc------cchhHHHHHHHHHHhhhh--ccC Confidence 37777777889999999999999998543 467999999876543332 334577788887776543 334 Q ss_pred cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcc Q lcl|NC_020082. 228 VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDR 307 (354) Q Consensus 228 ~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~ 307 (354) .+..++|+|..|..|.+-. +..+.-++.-...........+.+-++...|...+..... |+ .+..+.+ + T Consensus 289 ~~~~~vmn~~~~~~l~~lk--d~~G~~l~~~~~~~~~~~~~~~~~~~l~G~pv~~s~~~~~------~~--~~~gd~~-~ 357 (413) T protein:vir:81 289 QADALVINPLDYQELRLAK--DANGQYYGGGVFQGQYGSGGIMLDPAPWGLRTVQSQVVPV------GK--PVVGAFR-S 357 (413) T ss_pred CCcEEEEcHHHHHHHHHhh--ccCCceeccccccccccccccccCceecceeeEEcCCCCc------cc--EEEEecc-c Confidence 5678999999999986433 3333322210000000000011112333444443332211 11 1111111 1 Q ss_pred eEEEeeccchhc--cccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 308 NLAMANPIPFRM--LAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 308 ~~~~~vp~~~~~--~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.+.....++. ..-. ...-...+.++.+++ +.+++|.+|++++++ T Consensus 358 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~~~l~~~ 408 (413) T protein:vir:81 358 AASVLRKGGVRIDSTNTNVDDFENNLITVRAEERVG-LMVTFPEAIVQLDVA 408 (413) T ss_pred EEEEEEecceEEEEeccccchhhcCcEEEEEEEeec-cEEecccceEEEEec Confidence 222222222221 1111 011134556677775 677899999999999 No 33 >protein:vir:104085 Length: 320 # NCBI annotation: gp17 # Family: family:all:507 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655596;genbank:gi:109392467;genbank:GeneID:4156953 Probab=98.68 E-value=6.8e-09 Score=65.35 Aligned_cols=294 Identities=7% Similarity=-0.067 Sum_probs=152.7 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |. .......+..+| ..+.+.++ +.++. ..+-+++++.....-..++++++..-. ..+..+.+.... T Consensus 1 ~~-~~~~~~~~~~~~------~~t~~~~~-~~~ip---~~~~~~ii~~~~~~s~l~~~~~~~~~~---~~~~~~p~~~~~ 66 (320) T protein:vir:10 1 MA-AGTAFQVDHAQI------AQTGDTMF-KGYLE---PEQAKDYFAEAEKTSIVQQFAQKVPMG---TTGQKIPHWIGD 66 (320) T ss_pred CC-CCccCCHHHHHh------hccccccc-ccccc---HHHHHHHHHHHHhccchhhhcceeecc---CCceEEEEEeCC Confidence 11 111111111111 11122222 23444 334567777777777777777765322 234556666677 Q ss_pred CceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCc Q lcl|NC_020082. 103 TMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGM 182 (354) Q Consensus 103 G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi 182 (354) +.+.|++.. ..+|..+...++...+.+.++..+.++.+=|+.+. .++...-....++++++.+|+.+|+|+....- T Consensus 67 ~~a~~v~E~-~~~~~~~~~f~~v~~~~~k~~~~~~is~ell~ds~---~~l~~~i~~~l~~a~a~~~d~a~l~G~g~~~~ 142 (320) T protein:vir:10 67 VSAQWIGEG-DMKPITKGNMTSQNIAPHKIATIFVASAETVRANP---ANYLGTMRTKVATAFAMAFDSAALNGTDSPFP 142 (320) T ss_pred cceEEecCC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC Confidence 778898865 55888888888999999999999999877666443 57888888999999999999999999864333 Q ss_pred eee---eecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHH Q lcl|NC_020082. 183 YGL---FNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHF 259 (354) Q Consensus 183 ~GL---lN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l 259 (354) .|+ ++..++... ....+...+ ..-+++.+++..+. .....+..++++|+.+..|.+-. +..+..++.-. T Consensus 143 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~~~ 214 (320) T protein:vir:10 143 TYLAQTTKSVSLADP-GGATASDLT--AYDAVAVNGLSLLV---NAKKKWTHTLLDDIVEPILNGAK--DKNGRPLFIES 214 (320) T ss_pred cccccccccccceec-ccccccccc--cHHHHHHHHHhhhh---cccCCCcEEEEcHHHHHHHHHhh--ccCCceeeccc Confidence 333 333222211 111111111 11223444444443 24456789999999999996533 33332221100 Q ss_pred HhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc----------------- Q lcl|NC_020082. 260 MEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP----------------- 322 (354) Q Consensus 260 ~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~----------------- 322 (354) ....... .....++...|....... ..++.. +.|- |...+-+.....++.... T Consensus 215 ~~~~~~~--~~~~~~i~g~pv~~~~~~------~~~~~~-~~~g-d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 284 (320) T protein:vir:10 215 TYTDENS--PFRAGRIVSRPTILSDHV------ADGTTV-GYMG-DFRNVIWGQVGGLSFDVTDQATLNLGTPTEPNFVS 284 (320) T ss_pred cccCccc--cccCceeeeeeeEecCCC------CCCceE-EEEe-ecceEEEEEecCeEEEEeecceeeeccccccccch Confidence 0000000 011123444444433321 112211 1111 111111222122111100 Q ss_pred -cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 323 -QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 323 -~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) -.++ ...+.+..++ ++.+.+|.+++.+.-+ T Consensus 285 ~f~~~-~~~~r~~~~~-d~~v~~~~a~~~l~~~ 315 (320) T protein:vir:10 285 LWQHN-LVAVRVEAEY-AFHNNDKDAFVKLTNV 315 (320) T ss_pred hhhcC-cEEEEEEEee-ccEEecccceEEEEec Confidence 0111 1344556666 5888999999998855 No 34 >protein:vir:81070 Length: 390 # NCBI annotation: p09 # Family: family:all:585 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285679;genbank:gi:148727187;genbank:GeneID:5247115 Probab=98.68 E-value=6.3e-09 Score=65.54 Aligned_cols=314 Identities=11% Similarity=0.043 Sum_probs=165.5 Q ss_pred CcccccchHH------hh-hccceeecCccccccc------------------cchhhhhhhhhhcCCccccchhhhhHH Q lcl|NC_020082. 1 MAIKTIDAQT------IQ-GNQWLVHKGYVSRNGD------------------QWVINNTALDAIGNPNVMLDADGGIAF 55 (354) Q Consensus 1 ~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~------------------~~~~~~~amda~~~~~~~~dA~~~~~f 55 (354) -.+..++++. ++ .+....-+..-..... .......-..++.....+....+++.+ T Consensus 45 ~e~~~l~~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (390) T protein:vir:81 45 ATVGNLSAEVQAARQRVAELEGNGAGGDVQHVSVGDMFVASEQFQASAGRWNDRSARATMNIKAALNTASTDAAGSAGAL 124 (390) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHhhhhhhhhhHHHHHHHhhccccccCCcce Confidence 0111111110 00 0000000000000000 000000111121112222223344445 Q ss_pred HHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEe Q lcl|NC_020082. 56 YISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGN 134 (354) Q Consensus 56 l~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~ 134 (354) +.. .+.+.+++........+.++.+..- +. ..+.+..... .+.+.|++.. ..+|..+...+.....++.++. T Consensus 125 ~~~---~~~~~ii~~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~a~~v~Eg-~~~~~~~~~~~~i~~~~~k~~~ 197 (390) T protein:vir:81 125 TTP---NRLPGFITPPDARLTVRDLIGSGRT-DS--ALIEYVQETGFVNNAAIVAEG-ALKPESSLKFAKKTDTTHVIAH 197 (390) T ss_pred ech---hhhHHHHHHHhhhhhhhhhcceeec-cC--CceEEEEEecCCcceeeecCC-cccccccceeeEEEEeeeEEEE Confidence 543 2345678877777777777765432 22 2344444433 4677888765 4578888888889999999999 Q ss_pred eeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHH Q lcl|NC_020082. 135 ECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLN 213 (354) Q Consensus 135 ~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~ 213 (354) ...++.+=|+.+ .++..--....++++++.+|+.+++|+... ...||++..+....+... +....+++|. T Consensus 198 ~~~is~ell~d~----~~~~~~i~~~l~~~~~~~~d~a~l~G~g~~~~~~Gi~~~~~~~~~~~~~-----~~~~~~~~~~ 268 (390) T protein:vir:81 198 TMKATRQILSDA----PQLASYMNNRLIRGLKVKEDAEILRGTGANDGLLGLIPQATTYAAPTTI-----AGATRVDQLR 268 (390) T ss_pred eehhhHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccceeeccccccccccc-----ccchhHHHHH Confidence 998887544332 257788888899999999999999998654 489999988765433221 1223367888 Q ss_pred HHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccccc Q lcl|NC_020082. 214 APIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN 293 (354) Q Consensus 214 ~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~ 293 (354) +++.++... ...+..++|+|+.|..|.+-. +..|.-++. . . ..+.+-++...|...+..... T Consensus 269 ~~~~~~~~~---~~~~~~~v~~~~~~~~l~~lk--d~~G~~l~~----~-~---~~~~~~~l~G~pv~~~~~~p~----- 330 (390) T protein:vir:81 269 LAMLQASLA---EYNPSGIVINPIDWAAIELAK--DANNQYLIG----N-A---RGTLTPTLWGLPVVATQAMAP----- 330 (390) T ss_pred HHHHhhccc---cCCCCEEEEcHHHHHHHHHhh--cCCCceeec----C-c---ccccCceecceeeEEcCCCCC----- Confidence 888777642 346678999999999997532 444432221 1 1 112222445555554443221 Q ss_pred CcceEEEEEEcCcceEEEeeccchhcccc-c----ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 294 SNKPRYMVYDKSDRNLAMANPIPFRMLAP-Q----MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 294 ~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~----~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |+ .++.+.+ +.+.+..-..+++... + .++ ...+.+..+++ +.++.|.+|+++.+| T Consensus 331 -~~--~~~gd~~-~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~r~~~r~d-~~v~~~~a~v~~t~a 390 (390) T protein:vir:81 331 -GE--FLVGAFD-LAAQIFDQWDARVEIGYVGEDFQRN-MITVLAEERLA-LVVYRPEALISGSFA 390 (390) T ss_pred -Cc--EEEEehh-ceEEEEEecceEEEEecccchhhcC-cEEEEEEEeec-cEEecccceEEEEeC Confidence 11 1111111 1122221122222111 1 112 23455677775 689999999999999 No 35 >protein:vir:1433 Length: 435 # NCBI annotation: putative major capsid protein # Family: family:all:21 # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536362;genbank:gi:17975167;genbank:GeneID:929171 Probab=98.67 E-value=1.5e-08 Score=63.43 Aligned_cols=326 Identities=11% Similarity=0.012 Sum_probs=166.6 Q ss_pred Cc-ccccchHHhhh-ccc---eeecC-cccccc---cc-------------chhh-----hhhhhhhcCCccccchhhhh Q lcl|NC_020082. 1 MA-IKTIDAQTIQG-NQW---LVHKG-YVSRNG---DQ-------------WVIN-----NTALDAIGNPNVMLDADGGI 53 (354) Q Consensus 1 ~~-~~~~~~~~~~~-~~~---~~~~~-~~~~~~---~~-------------~~~~-----~~amda~~~~~~~~dA~~~~ 53 (354) .. -+....+..+. ..+ ++... ...... .. .... ....... ..+.......+ T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~~~g 140 (435) T protein:vir:14 63 AAAAVPVDPNPTAVAAPAAAPVHAQPKALEVKGAKMARMVRALAAARGDAQLASKLAIERGFGEEVA--MSLNTLSPGAG 140 (435) T ss_pred HhhcccccchhhhhhhccccccccccchhhhhHHHHHHHHHHHHhhcchhhHHHHHHHhhhhhhhhh--hhcccCCcCCC Confidence 00 00000000000 000 00000 000000 00 0000 0000010 01111122223 Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEE Q lcl|NC_020082. 54 AFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAG 133 (354) Q Consensus 54 ~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~ 133 (354) .+++. +.+...|++...+....+.+..-.-+...+ .+.+.+....+.+.|++.. ..+|..+..........+.++ T Consensus 141 g~~vP--~~~~~~ii~~l~~~~~i~~~~~~~~~~~~~--~~~~p~~~~~~~a~~v~E~-~~~~~~~~~f~~i~~~~~k~~ 215 (435) T protein:vir:14 141 GVLVP--ENLSSEVIELLRPKSVVRKLGARTLPLSNG--NITIPRLKGGAIVGYIGAD-TDIPTTQQQFDDLKLTAKKMA 215 (435) T ss_pred ccccc--hhHHHHHHHHHhhhchhhhhcceeeecCCC--ceEEEEEeCCcceeeeccC-ccccccccceeEEEeeeEEEE Confidence 34554 456677888776665555542211112222 3556666667777888765 447877777888888899999 Q ss_pred eeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHH Q lcl|NC_020082. 134 NECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNML 212 (354) Q Consensus 134 ~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di 212 (354) ..+.+|.+=|+.+. .+.++..--....++++.+.+|+.+++|+... ...||++....+......++. |.+.+..++ T Consensus 216 ~~~~iS~ell~ds~-~~~~l~~~i~~~l~~ai~~~~d~a~l~G~G~~~~p~Gi~~~~~~~~~~~~~~~~--~~~~~~~~~ 292 (435) T protein:vir:14 216 ALVPIANDLIKYAG-VNPNVDQIVVGDLTAAIGAREDKAFIRDDGTANTPKGLRFWALPSNVITASDAS--TLQKIETDL 292 (435) T ss_pred EeehhhHHHHHhhc-cCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccceeecccccceecccccc--chhhHHHHH Confidence 88888765444432 23346677788889999999999999998653 578999887665544444443 466678899 Q ss_pred HHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccc Q lcl|NC_020082. 213 NAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS 292 (354) Q Consensus 213 ~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g 292 (354) .+++..+.... ....+..++|+|..|..|.... +..+.-++. . ..+ -++...|.......... .+ T Consensus 293 ~~l~~~~~~~~-~~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~---~------~~~--g~l~G~Pv~~~~~~p~~-~~ 357 (435) T protein:vir:14 293 GKVILALENAD-ANLTQPGWIMAPRTFRFLEGLR--DGNGNKVYP---E------LAN--GMLKGYPVGKTTQVPIN-LG 357 (435) T ss_pred HHHHHHhhhcc-ccccCCEEEEcHHHHHHHHHhh--ccCCceecc---C------CCC--CeeecceeEeecccccc-cc Confidence 99988887542 2234567999999999986533 333432221 1 011 13444444443322111 12 Q ss_pred cCcceEEEEEEcCcceEEEeeccchhcccc-c--------------ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 293 NSNKPRYMVYDKSDRNLAMANPIPFRMLAP-Q--------------MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 293 ~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~--------------~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+++.-.++|-+=.+.+ +..-.+++..-. + .++ ...+.+..+++ +.+.+|.+|+++.=+ T Consensus 358 ~~~~~~~i~~gd~s~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~~~r~~~r~d-~~~~~~~a~~~l~~~ 431 (435) T protein:vir:14 358 ETGKESEIYFTDFGDVF-IGEEETLEIDYSKEATYKDADGHMVSAFQRD-QTLIRVIAKND-FGPRHVESIAVLAGV 431 (435) T ss_pred CCCccceEEEeecccEE-EEEecccEEEEeccccccccccchhhhhhcC-hhheeeeeeeC-ceeecccceEEEecC Confidence 22222223332111222 222223222111 0 012 13455677775 589999999999888 No 36 >protein:vir:94771 Length: 298 # NCBI annotation: major head protein # Family: family:all:966 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996706;genbank:gi:45597421;genbank:GeneID:2769044 Probab=98.66 E-value=1.1e-08 Score=64.32 Aligned_cols=280 Identities=9% Similarity=-0.038 Sum_probs=158.2 Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccce Q lcl|NC_020082. 45 VMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQM 124 (354) Q Consensus 45 ~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~ 124 (354) |.++ ++ .+.. +.+.+++++...+.-..+++.++.. .+.+ ...+.+....+.+.|++.. ..+|..+...+. T Consensus 1 ma~~---gG-~lip--~~~~~~ii~~~~~~s~i~~~~~~~~-~~~~--~~~~p~~~~~~~a~~v~Eg-~~~~~~~~~f~~ 70 (298) T protein:vir:94 1 MVLN---KG-TLFD--PELVTDLISKVAGKSSIARLSAQKP-IPFN--GEKVFTFTMDSEIDVVAES-GKKTHGGVTLAP 70 (298) T ss_pred Ceec---cc-cccC--hhHHHHHHHHHHhhchhhhhcceee-ccCC--ceEEEEEecCcceEEeeCC-ccccccccceeE Confidence 3332 12 1222 3456677787777777777776543 2222 3456666667788898865 557888888888 Q ss_pred eEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-----CceeeeecCCccceecccc Q lcl|NC_020082. 125 HTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-----GMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 125 ~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-----gi~GLlN~p~~~~~~~~~~ 199 (354) .....+.++.-..+|.+=|+...-...++...-+...++++++.+|+.+++|.... ...|..+..+....... T Consensus 71 v~l~~~k~~~~~~iS~ell~~~~~~~~~l~~~i~~~la~ai~~~~d~~~l~G~~~~~g~~~~~~~~~~~~~~~~~~~~-- 148 (298) T protein:vir:94 71 QTMVPIKVEYGARISDEFMYASDEEKINILQAFNDGFAKKVARGIDLMAFHGVNPRLGTASAVIGTNHFDSKVTQKVE-- 148 (298) T ss_pred EEEeeeEEEEeeehhHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCcccccccccccccccccccc-- Confidence 88888898888888766454333334567778888999999999999999995321 12222222221111000 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeec Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRF 279 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~ 279 (354) .......+++||.+++.++... ...+..++|+|..+..|.+.. +..|.-++. .. ...+.+-++...| T Consensus 149 -~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~vmn~~~~~~l~~lk--d~~G~~l~~----~~---~~~~~~~tl~G~P 215 (298) T protein:vir:94 149 -APRGIADPNGAIENAVELLTGV---DADVTGIAINPSFRSALAKQK--DLQGNALFP----EL---KWGATPDTINGLP 215 (298) T ss_pred -cccccccHHHHHHHHHHhhhhc---CCCccEEEEcHHHHHHHHHhh--ccCCCeeec----Cc---ccCCCCceeccee Confidence 0112345678999999888652 345678999999999996532 333322211 10 1123344565666 Q ss_pred eeeeccccccccccCcceEEEEEEcCcceEEEeeccch--hcccc-cc---------cCceeEEeeeeeeeeEEEECcce Q lcl|NC_020082. 280 QLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPF--RMLAP-QM---------ASLGITVPAEYKISGTEFRYPLC 347 (354) Q Consensus 280 ~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~--~~~~~-~~---------~~~~~~~~~~~~~gGv~i~~P~a 347 (354) .+.+...... ...+++.++.-+.+ +.+.+.+-..+ ...+- .+ ++ ..-+.++.++ |+.+++|.+ T Consensus 216 V~~~~~v~~~--~~~~~~~~~~Gdfs-~~~~~~~~~~~~~~~~~~~~~d~~~~~~f~~~-~v~~r~~~r~-~~~~~~~~a 290 (298) T protein:vir:94 216 VDVNKTVSDM--SLTQRDRAIIGDFA-NGFKWGYAKEVPLEVIQYGDPDNSGLDLKGYN-QVYIRAELFL-GWGILDATK 290 (298) T ss_pred eEEecccccc--cCCCccEEEEeecc-ceEEEEEecCceEEEeecCCCcCcchhhhhcC-cEEEEEEEEe-ccEeecccc Confidence 6555433221 12233433332222 11112111221 11110 01 11 1234556666 588889999 Q ss_pred eeeeecC Q lcl|NC_020082. 348 AAYVDMA 354 (354) Q Consensus 348 i~y~D~~ 354 (354) ++++--+ T Consensus 291 ~~~l~~~ 297 (298) T protein:vir:94 291 FARVTEA 297 (298) T ss_pred eEEEEec Confidence 9999888 No 37 >protein:vir:95763 Length: 297 # NCBI annotation: head protein # Family: family:all:507 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950590;genbank:gi:119953785;genbank:GeneID:5076833 Probab=98.65 E-value=1.9e-08 Score=62.86 Aligned_cols=278 Identities=6% Similarity=-0.080 Sum_probs=157.0 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.. -.|++. ..+...+++..+- +.+..++++.....-..+++.++..-.+.+ ...+...... T Consensus 1 m~~---------~~~~~~----~~~~t~~~~~lvP---~~~~~~ii~~~~~~s~l~~~~~~~~~~~~~--~~~~~~~~~~ 62 (297) T protein:vir:95 1 MTV---------QTFNPE----NVLVSQKKDGTLH---KEFTDIIMKEVAQNSLVMQLGQYQEMEGEQ--EKTVYVQTDG 62 (297) T ss_pred CCc---------cccccc----cccccCCCcceec---hhHHHHHHHHHHhhchhhhhcceeecCCCc--cEEEEEEcCC Confidence 100 012221 1122223333333 455677888777777777777765322222 2344555556 Q ss_pred CceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCc Q lcl|NC_020082. 103 TMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGM 182 (354) Q Consensus 103 G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi 182 (354) ..+.++++.+ .+|..+...+......+.++....++.+-++.+. .++...-....++++++.+|+.+++|+...+- T Consensus 63 ~~a~~v~Eg~-~~~~~~~~f~~v~l~~~k~~~~~~is~ell~ds~---~~l~~~i~~~la~ai~~~~d~a~l~G~g~~~~ 138 (297) T protein:vir:95 63 ISAYWVNETE-KIKTDKPEVVPVTLKAHKLGIILVTSREALNYTW---KKFFEDMKPQIVEAFYKKIDEAGLLGHDTPFA 138 (297) T ss_pred ceeEEeecCc-cccccccceeEEEEeeEEEEEeehhhHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHhcccCCccc Confidence 6788888754 5788888888889999999999999886666553 46888888999999999999999999887777 Q ss_pred eeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhc Q lcl|NC_020082. 183 YGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEA 262 (354) Q Consensus 183 ~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n 262 (354) .|+++.......... +. -| +++|.+++.++... ...+..++|+|..+..|.+-. +..+.-++ . T Consensus 139 ~gi~~~~~~~~~~~~-~~--~t----~~~i~~~~~~l~~~---~~~~~~~v~~~~~~~~L~~l~--d~~G~~i~----~- 201 (297) T protein:vir:95 139 NSVAKAAKDANKVIG-GP--IN----YDNILKLQDALYDA---DVEPNAFVSKIQNRSALREAR--DGNKVSIY----D- 201 (297) T ss_pred ccccccccccceecc-cc--cC----HHHHHHHHHHhhhc---cCCcCEEEEcHHHHHHHHHhh--ccCCceee----c- Confidence 888876543221111 11 12 67788888888653 235678999999999996532 33332111 1 Q ss_pred CceeecccccceEEeeceeeeccccccccccCcceEEEEEEcC------cceEEEeeccchhcccc-c---------ccC Q lcl|NC_020082. 263 NSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKS------DRNLAMANPIPFRMLAP-Q---------MAS 326 (354) Q Consensus 263 ~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d------~~~~~~~vp~~~~~~~~-~---------~~~ 326 (354) +.+-.+...|...... ....+...+.-+.+ .+.+.+.+-........ + .++ T Consensus 202 -------~~~~~l~G~Pv~~~~~------~~~~~~~~~~gd~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (297) T protein:vir:95 202 -------KAANTIDGITTVDLKS------ARFEKGDLLAGDFDNLIYGVPYNITYKISEEGQISTITNADGTPINLFEQE 268 (297) T ss_pred -------CCCCcccceeeEeecC------CCCCCceEEEEecccEEEEEecCeEEEEeeccccccccccCccchhhhhcC Confidence 1111222222221111 00111112221211 11122222111111000 0 111 Q ss_pred ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 327 LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 327 ~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+.+..++ |..+.+|.+++.+=.| T Consensus 269 -~~~~r~~~~~-d~~v~~~~a~~~l~~a 294 (297) T protein:vir:95 269 -MIAIRATMDI-AVMITKTDAFAKLTPA 294 (297) T ss_pred -cEEEEEEEEe-ccEeecccceEEEeec Confidence 2445566776 4778889999999999 No 38 >protein:vir:4339 Length: 395 # NCBI annotation: major head protein # Family: family:all:585 # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061502;genbank:gi:9635591;genbank:GeneID:1262860 Probab=98.64 E-value=1.3e-08 Score=63.74 Aligned_cols=313 Identities=9% Similarity=0.081 Sum_probs=164.2 Q ss_pred CcccccchHHhh-------hccceeecCccccccccc---------------hhhhhhhhhhcCCccccchhhhhHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ-------GNQWLVHKGYVSRNGDQW---------------VINNTALDAIGNPNVMLDADGGIAFYIS 58 (354) Q Consensus 1 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---------------~~~~~amda~~~~~~~~dA~~~~~fl~~ 58 (354) ..++.++++.-+ ....-. ........... ....+.+.. ...+....+++..+. T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~vp- 126 (395) T protein:vir:43 52 TAQGELQARLSAAEQAMLANEKRDG-GEEAPKTAGQMVAESLKEQGVTSSLRGSHRVSMPR---SAITSIDGSGGALVA- 126 (395) T ss_pred HHHHHHHHHHHHHHHHHHhhhcccc-ccchhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhh---hhhcccCCCCccccc- Confidence 112222221110 000000 00000000000 000011110 111112222333333 Q ss_pred HHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeeccceeEEEEEEEEeeee Q lcl|NC_020082. 59 QLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECH 137 (354) Q Consensus 59 ~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~ 137 (354) ..+.+.|++........+.++++..-.+ .++.+.... ..+.+.|++..+ ..|..+...+......+.++..+. T Consensus 127 --~~~~~~ii~~~~~~~~l~~l~~~~~~~~---~~~~~~~~~~~~~~a~~v~E~~-~~~~~~~~~~~i~~~~~k~~~~~~ 200 (395) T protein:vir:43 127 --PDRRPGVVAAPQRRLTIRDLVAPGTTES---NSVEYVRETGFVNNAAPVSEGT-QKPYSDLTFELENAPVRTIAHLFK 200 (395) T ss_pred --hhhHHHHHHHHHhhhhHHhhccceecCC---CceEEEEEecCCCceeeecCCc-cccccccceeEEEEeeeeEEEeeh Confidence 3345678888888888888777654322 234555543 346778887754 578888888889999999999999 Q ss_pred ecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHH Q lcl|NC_020082. 138 YTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPI 216 (354) Q Consensus 138 ~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~ 216 (354) ++.+=|+.+ . .+..--....+++++..+|+.+++|+... ...|+++..++.....++. .+.+..+++|.+++ T Consensus 201 is~ell~d~---~-~l~~~v~~~la~a~~~~~d~~~l~G~g~~~~~~Gi~~~~~~~~~~~~~~---~~~~~~~~~i~~~~ 273 (395) T protein:vir:43 201 ASRQILDDA---S-ALQSYIDARARYGLMLVEECQLLYGNGTGANLHGIIPQAQAYAPPSGVV---VTAEQRIDRIRLAI 273 (395) T ss_pred hhHHHHHhH---H-HHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccccccccccccccc---cccchhHHHHHHHH Confidence 987544332 2 57777788899999999999999997543 3579999887654433322 23455788999888 Q ss_pred HHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCc- Q lcl|NC_020082. 217 FSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSN- 295 (354) Q Consensus 217 ~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g- 295 (354) ..+... ...+..++|+|..|..|.+.+ +..|.-++. . +. .+.+-++...|.+.........+--+. T Consensus 274 ~~~~~~---~~~~~~~vmn~~~~~~l~~lk--d~~G~~i~~----~-~~---~~~~~~l~G~pVv~~~~~~~~~~~~gd~ 340 (395) T protein:vir:43 274 LQAQLA---EFPASGIVLNPIDWALIELNK--DAENRYIIG----S-PQ---NGTTPTLWRLPVVETQAITQDEFLTGAF 340 (395) T ss_pred Hhhccc---cCCCcEEEEcHHHHHHHHHhh--ccCCceecc----c-cc---cCCCceecceeeEEcCCCCCCcEEEEec Confidence 887542 335678999999999986543 334432321 1 11 112223444444443322111100011 Q ss_pred ceEEEEEEcCcceEEEeeccchhccccccc-Cc---eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 296 KPRYMVYDKSDRNLAMANPIPFRMLAPQMA-SL---GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 296 ~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~-~~---~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +..+.++++. .+.+.+ .. +.+ .+ .+.+.++.++ ++.+++|.+|++++++ T Consensus 341 ~~~~~~~~~~--~~~i~~------~~-~~~~~f~~~~~~~r~~~r~-d~~v~~~~a~~~~~~t 393 (395) T protein:vir:43 341 SLGAQIFDRM--DIEVLV------ST-ENDKDFENNMVTIRAEERL-AFAVYRPEAFVTGSLT 393 (395) T ss_pred cceEEEEEec--ceEEEE------ec-cccchhhcCcEEEEEEEee-ccEEecccceEEEEec Confidence 1112222211 111111 11 111 11 2234445565 5778999999999999 No 39 >protein:vir:2504 Length: 305 # NCBI annotation: major capsid subunit gp9 # Family: family:all:507 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569745;genbank:gi:18496895;genbank:GeneID:932268 Probab=98.62 E-value=3e-08 Score=61.83 Aligned_cols=275 Identities=11% Similarity=0.026 Sum_probs=148.2 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCC--- Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQ--- 113 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~--- 113 (354) |-. +++ .+++. +.. +.+.+.|++...+.-..++++.+..- + ..+..+.+....+.+.|++.... T Consensus 1 ma~------~t~-~~gg~-liP--~~~~~~Ii~~~~~~s~l~~l~~~~~~-~--~~~~~~p~~~~~~~a~wv~E~~~~~~ 67 (305) T protein:vir:25 1 MAD------ISR-AEVAS-LIQ--EAYSDTLLAAAKQGSTVLSAFQNVNM-G--TKTTHLPVLATLPEADWVGESATDPK 67 (305) T ss_pred CCC------ccC-Cccce-ecC--HHHHHHHHHHHHhhchhhhhcceeec-c--CCcEEEEEEeCCcceEEeeccccccc Confidence 111 111 12233 333 45567888888877777777766532 2 22455666666677888876553 Q ss_pred -ccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh---CceeeeecC Q lcl|NC_020082. 114 -DLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR---GMYGLFNNP 189 (354) Q Consensus 114 -dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~---gi~GLlN~p 189 (354) ++|..+...+......+.++....++.+=++. ...++..--.+..++++++.+|+.+|+|+... +..+.++.. T Consensus 68 ~~~~~s~~~f~~i~~~~~k~~~~~~is~ell~d---s~~~~~~~i~~~l~~~~a~~~d~a~~~G~g~~~~~~~~~~~~~~ 144 (305) T protein:vir:25 68 GVKPTSKVTWANRTLVAEEIAVIIPVHENVIDD---ATVAVLTEVAELGGQAIGKKLDQAVIFGTDKPASWVSPALIPAA 144 (305) T ss_pred ccccccccceeeEEeeeEEEEEeehhhHHHHhc---chHHHHHHHHHHHHHHHHHHHhhhheeccCCCCCcccccccccc Confidence 35666667777888889988888888754443 34568888889999999999999999998542 222222221 Q ss_pred Cccceeccccccc-cCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeec Q lcl|NC_020082. 190 NVTLSSATKDYKT-MNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLL 268 (354) Q Consensus 190 ~~~~~~~~~~w~~-~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~ 268 (354) .... .....+.. .+..++++++.++...+.. ....+..++|+|..+..|.+. .+..+.-++ ..+ .. T Consensus 145 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~l~~l--kd~~G~~i~----~~~---~l 211 (305) T protein:vir:25 145 VTAG-QAVEVVGGVANESDIVGATNRAAKAVAS---AGWAPDTLLSSLALRYEVANI--RDANGNPVF----RDD---SF 211 (305) T ss_pred cccc-ccccccccchhhhHHHHHHHHHHHhhhh---cccccceeEecHHHHHHHHHh--hccCCceee----cCC---cc Confidence 1111 11111211 2234566666666655532 234556799999999998643 233343221 111 11 Q ss_pred ccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcc--------cc--ccc---CceeEEeeee Q lcl|NC_020082. 269 TGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRML--------AP--QMA---SLGITVPAEY 335 (354) Q Consensus 269 ~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~--------~~--~~~---~~~~~~~~~~ 335 (354) .|.|..+ ..... ...++.. +++ -|...+.+.....++.. .. +.. .=...+.++. T Consensus 212 ~G~Pv~~-------~~~~~----~~~~~~~-~~~-gd~s~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 278 (305) T protein:vir:25 212 AGFRTFF-------NRNGA----WDADAAI-EVI-ADSSRVKIGVRQDITVKFLDQATLGTGENQINLAERDMVALRLKA 278 (305) T ss_pred cccceEE-------cCccC----CCCCccE-EEE-EecceEEEEEecCeEEEEeeeeeeecCCceeeeeecCcEEEEEEE Confidence 2333222 21110 0011111 111 12222222222221110 10 000 0123456677 Q ss_pred eeeeEEEECcceeeeeecC Q lcl|NC_020082. 336 KISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 336 ~~gGv~i~~P~ai~y~D~~ 354 (354) |+| +.+.+|.++++++.. T Consensus 279 r~~-~~v~~p~a~v~~~~~ 296 (305) T protein:vir:25 279 RFA-YVLGVSATAQGANKT 296 (305) T ss_pred eec-ceeeCcccEEEEccc Confidence 775 678999999999997 No 40 >protein:vir:78223 Length: 333 # NCBI annotation: Putative major head protein # Family: family:all:966 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491666;genbank:gi:157786490;genbank:GeneID:5625701 Probab=98.61 E-value=1.6e-08 Score=63.26 Aligned_cols=303 Identities=12% Similarity=-0.009 Sum_probs=163.3 Q ss_pred cccccccchhhhh-hhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc Q lcl|NC_020082. 23 VSRNGDQWVINNT-ALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~-amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~ 101 (354) +.- ...+ ++.+-.++.-.+.+. +..+.. +.+-.+|++.....-..+++..+.. .+.+ ...+.+... T Consensus 1 ~a~------l~el~~~~~~~~~~g~~~~~--~~~liP--~~~~~~ii~~l~~~s~l~~~~~~~~-~~~~--~~~~p~~~~ 67 (333) T protein:vir:78 1 MAT------LNELLPNSAGSNHQGRLAHV--PSDLLP--KEIVGPIFDKAQESSLVLRMGEQIP-ISYG--ETIIPTTVK 67 (333) T ss_pred Cch------hHHhhhhcccccccCceecC--Cccccc--hhHHHHHHHHHHhhchhhhhcceee-ccCC--ceEEEEEeC Confidence 110 0011 111100111111111 111222 4566778888877777787776643 2322 344555555 Q ss_pred cCceeEecCC-------CCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheee Q lcl|NC_020082. 102 VTMGKFIGAN-------GQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAY 174 (354) Q Consensus 102 ~G~a~~~~~~-------~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f 174 (354) ...+.|++.. +..+|..+...+......+.++.-..++.+=++.+ ..++..--....++++++.+|+.+| T Consensus 68 ~~~a~~v~eg~~~~~~e~~~~~~~~~~f~~i~l~~~kl~~~~~is~ell~~s---~~~~~~~i~~~la~ai~~~~d~~~l 144 (333) T protein:vir:78 68 RPEVGQVGVGTSNEQREGGLKPLSGTAWDTRSVSPIKLATIVTVSEEFARMN---PSGLYTKLQGDLAYAIGRGIDLAVF 144 (333) T ss_pred CceeEeecCcccccccccccccccccceeEEEEeeEEEEEeehhhHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHh Confidence 5555555432 23467667777788888899988888887444433 3467788888999999999999999 Q ss_pred eeehh---hCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhcc-CCCC Q lcl|NC_020082. 175 FGDSS---RGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQL-MTGY 250 (354) Q Consensus 175 ~G~~~---~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~-~~~~ 250 (354) +|+.. .+..|+++..++...+.. .....+.+..+++|.+++..+.. ++...+..++|+|..|..|.+-. ..+. T Consensus 145 ~G~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~vmn~~~~~~L~~~~~~~d~ 221 (333) T protein:vir:78 145 HGKSPLTGSALQGIDTDNVIANTTNV-DYLQETGDPLLDRLLDGYDLVSA--NTDVEFNGWAVDPRFRAHLLRAQAYRDA 221 (333) T ss_pred cccCCCCCcccccccccccccccccc-cccccccchhHHHHHHHHHhhcc--ccccCceEEEEcchHHHHHHHHhhhcCC Confidence 99864 567788887765433221 11222334457888888877654 34556778999999998875422 2233 Q ss_pred CCchHHHHHHhcCceeecccccceEEeeceeeecccccc-ccccCcceEEEEEEcCcceEEEeeccchhc--ccc----c Q lcl|NC_020082. 251 TDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAAN-GVSNSNKPRYMVYDKSDRNLAMANPIPFRM--LAP----Q 323 (354) Q Consensus 251 ~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~-g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~--~~~----~ 323 (354) .+.-++... ...+.+-++...|...+..+... +.+..++...+.-+.+. +.+.....++. .+- . T Consensus 222 ~G~~i~~~~-------~~~~~~~~l~G~Pv~~~~~i~~~~~~~~~~~~~~~~gD~~~--~~~g~~~~~~i~~~~~~~~~~ 292 (333) T protein:vir:78 222 NGNVDPSRI-------NLAAQTGDVLGLPAQFGRAVGGDLGAAVDSKTRIIGGDFSQ--LKFGFADEIRIKMSDTATLTD 292 (333) T ss_pred CCceeecCc-------cccCCCceeeceeeEEccccCCCccccCCCccEEEEEeccc--EEEEEeeccEEEEeccccccc Confidence 333222111 11233445666666555433221 11222222222223222 22222222222 110 0 Q ss_pred cc----C-c---eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 324 MA----S-L---GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 324 ~~----~-~---~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. + . ...+.++.++ ++.+++|.+++++=-+ T Consensus 293 ~~~~~~~~~~~~~v~~r~~~r~-d~~v~~~~a~~~l~~~ 330 (333) T protein:vir:78 293 SGSATVSMWQTNQIAILIEVTF-GWLLGDKQAFVKFVDD 330 (333) T ss_pred cccceeehhhcCcEEEEEEEEE-ccEEecccceEEEecc Confidence 00 0 0 1234566766 4778999999998777 No 41 >protein:vir:96223 Length: 324 # NCBI annotation: ORF011 # Family: family:all:507 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239571;genbank:gi:66395304;genbank:GeneID:5132771 Probab=98.60 E-value=2.4e-08 Score=62.37 Aligned_cols=294 Identities=7% Similarity=-0.047 Sum_probs=155.0 Q ss_pred ccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhcc Q lcl|NC_020082. 3 IKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVP 82 (354) Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~ 82 (354) ||--+-. .....++......++.. ....++.++.++..+- +.+-.++++.....-..+++++ T Consensus 1 ~~~~~~~--------------~~~~~~f~~~~~~~~~~-~a~~~~~~~~~~~lip---~~~~~~ii~~~~~~s~l~~l~~ 62 (324) T protein:vir:96 1 MEQTQKL--------------KLNLQHFASNNVKPQVF-NPDNVMMHEKKDGTLL---NDFTTPILQEVMENSKIMQLGK 62 (324) T ss_pred CCcchhh--------------hHHHHHHHHhhhhhhhc-ccccccccCCCcceec---hhHHHHHHHHHHhhchhhhhcc Confidence 1111110 11111111111122211 1111222233333333 3345667776666666677666 Q ss_pred ccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHH Q lcl|NC_020082. 83 MAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAF 162 (354) Q Consensus 83 v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~ 162 (354) +.. .+. .++.+.+....+.+.|++.. ..+|..+...+......+.++....++.+=++.+ ..++...-.+..+ T Consensus 63 ~~~-~~~--~~~~~p~~~~~~~a~~v~Eg-~~~~~~~~~f~~v~~~~~k~~~~~~is~ell~ds---~~~l~~~i~~~l~ 135 (324) T protein:vir:96 63 YEP-MEG--TEKKFTFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIA 135 (324) T ss_pred eee-ccC--CceEEEEEecCcceeeecCC-ccccccccceeEEEEEeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHH Confidence 543 222 24566777677788898775 5578888888888999999998888887656544 3568888888999 Q ss_pred HHHHHHhhheeeeeehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHH Q lcl|NC_020082. 163 RGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQ 241 (354) Q Consensus 163 ~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~ 241 (354) +++++.+|+.+|+|+...+ ..|+++..... ..+...+ .-+++|.+++.++... ...+..++++|..+.. T Consensus 136 ~aia~~~d~~~l~G~g~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~i~~~~~~i~~~---~~~~~~~i~n~~~~~~ 205 (324) T protein:vir:96 136 EAFYKKFDEAGILNQGNNPFGKSIAQSIKKT-----NKVIKGD--FTQDNIIDLEALLEDD---ELEANAFISKTQNRSL 205 (324) T ss_pred HHHHHHHHHHhhhcCCCCCcCcccccccccc-----ceecccc--cchHHHHHHHHhhhhc---cCCCCEEEEcHHHHHH Confidence 9999999999999975443 23443322211 1111111 1257778888777542 3466789999999999 Q ss_pred HhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccc Q lcl|NC_020082. 242 ANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLA 321 (354) Q Consensus 242 L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~ 321 (354) |.+.. +..+.-++ . .+.+-++...|....... ..++..++.-+ ..++.+....+++.-. T Consensus 206 L~~lk--d~~G~~~~----~-------~~~~~~l~G~PV~~~~~~------~~~~~~~~~gd--~s~~~~~~~~~~~i~~ 264 (324) T protein:vir:96 206 LRKIV--DPETKERI----Y-------DRNSDSLDGLPVVNLKSS------NLKRGELITGD--FDKLIYGIPQLIEYKI 264 (324) T ss_pred HHHhh--CCCCCeee----c-------CCCCCcccceeeEeecCC------CCCcceEEEEe--cceEEEEEecCcEEEE Confidence 96532 33332221 1 122222333332221111 11111122111 1122222222222111 Q ss_pred c------------------cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 322 P------------------QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 322 ~------------------~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . -.++ ...+.+..++ |+.+.+|.+++++-.| T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~n-~v~~r~~~r~-d~~v~~~~a~~~l~~a 313 (324) T protein:vir:96 265 DETAQLSTVKNEDGTPVNLFEQD-MVALRATMHV-ALHIADDKAFAKLVPA 313 (324) T ss_pred eecccccccccccccchhhhhcC-cEEEEEEEEe-ccEEecccceEEEecc Confidence 0 0111 2345566776 4678889999999999 No 42 >protein:vir:80376 Length: 435 # NCBI annotation: gp6, major capsid head protein # Family: family:all:21 # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111085;genbank:gi:134288639;genbank:GeneID:4960624 Probab=98.60 E-value=2.2e-08 Score=62.56 Aligned_cols=326 Identities=11% Similarity=0.010 Sum_probs=164.3 Q ss_pred CcccccchHHhhhccce-----eecCccccccccch---------------------hhhhhhhhhcCCccccchhhhhH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWL-----VHKGYVSRNGDQWV---------------------INNTALDAIGNPNVMLDADGGIA 54 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---------------------~~~~amda~~~~~~~~dA~~~~~ 54 (354) -.-+.++.+........ ..+.........+. ........+. .+.+.....+. T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gg 141 (435) T protein:vir:80 64 AAAVPVDPNPAAVTASAAAPVYAQPKAPEVKGAKMARMVRALAAARGDAQLASKLAIERGFGEEVAM--SLNTLSPGAGG 141 (435) T ss_pred hhcccccchhhhhccccccccccccchhhhhHHHHHHHHHHHHhccchhHHHHHHHHhhhhhhhhhh--hhcccCCCCCc Confidence 00000110000000000 00000000000000 0000011100 01111112233 Q ss_pred HHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEe Q lcl|NC_020082. 55 FYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGN 134 (354) Q Consensus 55 fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~ 134 (354) +++. +.+...+++...+.-..+.+-... .+.....+.+.+....+.+.|++.. ..+|..+...+......+.++. T Consensus 142 ~lvP--~~~~~~ii~~l~~~~~i~~~~~~~--v~~~~~~~~~p~~~~~~~a~~v~E~-~~~~~~~~~f~~i~~~~~k~~~ 216 (435) T protein:vir:80 142 VLVP--ENLSSEVIELLRPKSVVRKLGART--LPLSNGNITIPRLKGGAIVGYIGAD-TDIPTTQQQFDDLKLTAKKMAA 216 (435) T ss_pred cccc--hhHHHHHHHHHhhhchhhhcccee--eecCCCceEEEEEeCCcceeeeccC-ccccccccceeeEEEeeEEEEE Confidence 4444 445677887666555555542111 1111223556666667777888765 4478888888888889999999 Q ss_pred eeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceeccccccccCHHHHHHHHH Q lcl|NC_020082. 135 ECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLN 213 (354) Q Consensus 135 ~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~ 213 (354) .+.+|.+=|+.+. .+-++..--....+.++++.+++.+++|+.. ....||+++.........+.+ .+.+.+..|+. T Consensus 217 ~~~is~ell~ds~-~~~~l~~~i~~~l~~a~~~~~d~a~l~G~G~~~~p~Gi~~~~~~~~~~~~~~~--~~~~~~~~d~~ 293 (435) T protein:vir:80 217 LVPIANDLIKYAG-VNPNVDQIVVGDLTAAIGAREDKAFIRDDGTANTPKGLRFWALPGNVITASDG--STLQKIETDLG 293 (435) T ss_pred eehhhHHHHHhhc-ccHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccceeecccccceeecccc--cchhhHHHHHH Confidence 8888866554432 2345677788899999999999999999864 357899998866544333333 34667778899 Q ss_pred HHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccccc Q lcl|NC_020082. 214 APIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN 293 (354) Q Consensus 214 ~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~ 293 (354) +++..+..... ...+..++|+|..+..|.+.. +..|.-++. . ..+ -++...|.......... .+. T Consensus 294 ~~~~~~~~~~~-~~~~~~~vmn~~~~~~L~~lk--d~~G~~l~~---~------~~~--~~l~G~pv~~~~~~p~~-~~~ 358 (435) T protein:vir:80 294 KAILALENADA-NLTQPGWIMAPRTFRFLEGLR--DGNGNKVYP---E------LAN--GMLKGYPVGKTTQVPIN-LGE 358 (435) T ss_pred HHHHHhhcccc-ccccCEEEEcHHHHHHHHhhh--ccCCceecc---C------CCC--CeEeeeeeEEecccccc-ccC Confidence 98888865422 234568899999999996543 444433321 0 011 13444444433332211 122 Q ss_pred CcceEEEEEEcCcceEEEeeccchhcccc-c--------------ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 294 SNKPRYMVYDKSDRNLAMANPIPFRMLAP-Q--------------MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 294 ~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~--------------~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++...-++|- |...+-+..-..+++... + .++ ...+.+..++ ++.+++|.+|+++.=+ T Consensus 359 ~~~~~~i~~g-d~s~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~f~~n-~~~~r~~~r~-d~~~~~~~a~~~l~~~ 431 (435) T protein:vir:80 359 AGKESEIYFT-DFGDVFIGEEETLEIDYSKEATYKDADGHMVSAFQRD-QTLIRVIAKN-DFGPRHVESIAVLSGV 431 (435) T ss_pred CCCcceEEEE-EcccEEEEeecceEEEEeccccccccccchhhhhhcC-cceeeeeeee-CcEeecccceEEEecc Confidence 2221122222 111111211112211110 0 012 2355667776 5889999999998877 No 43 >protein:vir:191 Length: 385 # NCBI annotation: major head subunit precursor # Family: family:all:585 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037701;genbank:gi:9634158;genbank:GeneID:1262530 Probab=98.59 E-value=4.9e-09 Score=66.16 Aligned_cols=313 Identities=10% Similarity=0.029 Sum_probs=167.3 Q ss_pred Ccccc----cchHHhhhccceeecCccccccccchhhhh--hhhhhc--------CCccccchhhhhHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKT----IDAQTIQGNQWLVHKGYVSRNGDQWVINNT--ALDAIG--------NPNVMLDADGGIAFYISQLAGIEAT 66 (354) Q Consensus 1 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--amda~~--------~~~~~~dA~~~~~fl~~~L~~id~~ 66 (354) -.++- ++...-+...+...++... .......... .++... ...+...+++++.++. ..+.+. T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~---~~~~~~ 123 (385) T protein:vir:19 48 EELTKSGTRLFDLEQKLASGAENPGEKK-SFSERAAEELIKSWDGKQGTFGAKTFNKSLGSDADSAGSLIQ---PMQIPG 123 (385) T ss_pred HHHHHHHHHHHHHHHHhhccccccchhh-hhHHHHHHHHHHHHHHhhccchhhHHHhhhccccccCCceec---chhhhH Confidence 00000 0000000000000000000 0000000000 000000 0122233344454554 345677 Q ss_pred HHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHH Q lcl|NC_020082. 67 VYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRK 145 (354) Q Consensus 67 v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~ 145 (354) +++........+.++++..-.+ .++.+..... .+.+.|++.+ ..+|..+...+......+.++..+.++.. +.. T Consensus 124 ii~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~a~~v~E~-~~~~~~~~~~~~~~~~~~k~~~~~~is~e-ll~ 198 (385) T protein:vir:19 124 IIMPGLRRLTIRDLLAQGRTSS---NALEYVREEVFTNNADVVAEK-ALKPESDITFSKQTANVKTIAHWVQASRQ-VMD 198 (385) T ss_pred HHHHhhhccchhhhcceecccC---cceEEEEEecCCcceeeeccC-ccccccccceeEEEEeeeeEEEeehhhHH-HHh Confidence 8888888888888887754322 2455565544 4567787765 55788888888899999999999999864 433 Q ss_pred HHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 146 SAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 146 a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) -. ..+...-....+++++..+|+.+++|+... ...||++.++....+... +.+..+++|.+++.++.. T Consensus 199 d~---~~l~~~i~~~la~a~~~~~d~~~l~G~g~~~~~~Gi~~~~~~~~~~~~~-----~~~~~~d~i~~~~~~l~~--- 267 (385) T protein:vir:19 199 DA---PMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAYDTSLNA-----TGDTRADIIAHAIYQVTE--- 267 (385) T ss_pred hH---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccccccccccccc-----cccchHHHHHHHHHhhcc--- Confidence 22 247777788889999999999999998543 467999988765443222 233357888888888753 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK 304 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~ 304 (354) ....+..++|+|..|..|..-. +..|.-++. ++. .+.+-.+...|.+.+..... + ..+..+. T Consensus 268 ~~~~~~~~~~~~~~~~~l~~lk--d~~G~~l~~-----~~~---~~~~~~l~G~pV~~~~~~p~------~--~~~~gd~ 329 (385) T protein:vir:19 268 SEFSASGIVLNPRDWHNIALLK--DNEGRYIFG-----GPQ---AFTSNIMWGLPVVPTKAQAA------G--TFTVGGF 329 (385) T ss_pred ccCCCCEEEEcHHHHHHHHHhh--cCCCceecc-----Ccc---cCCCceecceeeEEcCcCCC------C--cEEEeec Confidence 2345679999999999986533 444433321 111 22233444555554433221 1 1111111 Q ss_pred CcceEEEeeccchhcccc-cc-----cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 305 SDRNLAMANPIPFRMLAP-QM-----ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 305 d~~~~~~~vp~~~~~~~~-~~-----~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.+.+..-..++.... +. ++ .+.+.++.+++ +.+++|.+|++++++ T Consensus 330 -~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~r~~-~~v~~~~a~~~~~~~ 382 (385) T protein:vir:19 330 -DMASQVWDRMDATVEVSREDRDNFVKN-MLTILCEERLA-LAHYRPTAIIKGTFS 382 (385) T ss_pred -ccEEEEEEecceEEEEeccccchhhcC-cEEEEEEEeec-cEEecccceEEEEec Confidence 12222222222222111 11 22 24555677776 677899999999999 No 44 >protein:vir:1886 Length: 385 # NCBI annotation: major capsid subunit precursor # Family: family:all:585 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037666;genbank:gi:9634124;genbank:GeneID:1262513 Probab=98.59 E-value=4.9e-09 Score=66.16 Aligned_cols=313 Identities=10% Similarity=0.029 Sum_probs=167.3 Q ss_pred Ccccc----cchHHhhhccceeecCccccccccchhhhh--hhhhhc--------CCccccchhhhhHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKT----IDAQTIQGNQWLVHKGYVSRNGDQWVINNT--ALDAIG--------NPNVMLDADGGIAFYISQLAGIEAT 66 (354) Q Consensus 1 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--amda~~--------~~~~~~dA~~~~~fl~~~L~~id~~ 66 (354) -.++- ++...-+...+...++... .......... .++... ...+...+++++.++. ..+.+. T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~---~~~~~~ 123 (385) T protein:vir:18 48 EELTKSGTRLFDLEQKLASGAENPGEKK-SFSERAAEELIKSWDGKQGTFGAKTFNKSLGSDADSAGSLIQ---PMQIPG 123 (385) T ss_pred HHHHHHHHHHHHHHHHhhccccccchhh-hhHHHHHHHHHHHHHHhhccchhhHHHhhhccccccCCceec---chhhhH Confidence 00000 0000000000000000000 0000000000 000000 0122233344454554 345677 Q ss_pred HHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHH Q lcl|NC_020082. 67 VYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRK 145 (354) Q Consensus 67 v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~ 145 (354) +++........+.++++..-.+ .++.+..... .+.+.|++.+ ..+|..+...+......+.++..+.++.. +.. T Consensus 124 ii~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~a~~v~E~-~~~~~~~~~~~~~~~~~~k~~~~~~is~e-ll~ 198 (385) T protein:vir:18 124 IIMPGLRRLTIRDLLAQGRTSS---NALEYVREEVFTNNADVVAEK-ALKPESDITFSKQTANVKTIAHWVQASRQ-VMD 198 (385) T ss_pred HHHHhhhccchhhhcceecccC---cceEEEEEecCCcceeeeccC-ccccccccceeEEEEeeeeEEEeehhhHH-HHh Confidence 8888888888888887754322 2455565544 4567787765 55788888888899999999999999864 433 Q ss_pred HHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 146 SAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 146 a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) -. ..+...-....+++++..+|+.+++|+... ...||++.++....+... +.+..+++|.+++.++.. T Consensus 199 d~---~~l~~~i~~~la~a~~~~~d~~~l~G~g~~~~~~Gi~~~~~~~~~~~~~-----~~~~~~d~i~~~~~~l~~--- 267 (385) T protein:vir:18 199 DA---PMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAYDTSLNA-----TGDTRADIIAHAIYQVTE--- 267 (385) T ss_pred hH---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccccccccccccc-----cccchHHHHHHHHHhhcc--- Confidence 22 247777788889999999999999998543 467999988765443222 233357888888888753 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK 304 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~ 304 (354) ....+..++|+|..|..|..-. +..|.-++. ++. .+.+-.+...|.+.+..... + ..+..+. T Consensus 268 ~~~~~~~~~~~~~~~~~l~~lk--d~~G~~l~~-----~~~---~~~~~~l~G~pV~~~~~~p~------~--~~~~gd~ 329 (385) T protein:vir:18 268 SEFSASGIVLNPRDWHNIALLK--DNEGRYIFG-----GPQ---AFTSNIMWGLPVVPTKAQAA------G--TFTVGGF 329 (385) T ss_pred ccCCCCEEEEcHHHHHHHHHhh--cCCCceecc-----Ccc---cCCCceecceeeEEcCcCCC------C--cEEEeec Confidence 2345679999999999986533 444433321 111 22233444555554433221 1 1111111 Q ss_pred CcceEEEeeccchhcccc-cc-----cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 305 SDRNLAMANPIPFRMLAP-QM-----ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 305 d~~~~~~~vp~~~~~~~~-~~-----~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.+.+..-..++.... +. ++ .+.+.++.+++ +.+++|.+|++++++ T Consensus 330 -~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~r~~-~~v~~~~a~~~~~~~ 382 (385) T protein:vir:18 330 -DMASQVWDRMDATVEVSREDRDNFVKN-MLTILCEERLA-LAHYRPTAIIKGTFS 382 (385) T ss_pred -ccEEEEEEecceEEEEeccccchhhcC-cEEEEEEEeec-cEEecccceEEEEec Confidence 12222222222222111 11 22 24555677776 677899999999999 No 45 >protein:vir:8420 Length: 477 # NCBI annotation: gp15 # Family: family:all:21 # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818316;genbank:gi:29566752;genbank:GeneID:1260033 Probab=98.56 E-value=1e-08 Score=64.39 Aligned_cols=331 Identities=11% Similarity=0.066 Sum_probs=161.6 Q ss_pred Cccc----------------------------ccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhh Q lcl|NC_020082. 1 MAIK----------------------------TIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGG 52 (354) Q Consensus 1 ~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~ 52 (354) .... ...++.+++..... . .+.........+.. ...+++...++ T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~--~~~~~~~~~~g 164 (477) T protein:vir:84 93 ATVEVNEALTYEKGNGQSYFRDLAMQTVGMADEPAKERLRRHMVDV---E---SDKEIRKIAKVGEE--YRDLDRNGGTG 164 (477) T ss_pred cccccccchhhhhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhh---h---hhhhHHHHHHhhhh--hccccccCCCc Confidence 0000 00001111000000 0 00000000001111 11222222333 Q ss_pred hHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccC-ceeEecCCC----CccceeeeccceeEE Q lcl|NC_020082. 53 IAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVT-MGKFIGANG----QDLPRVAQSAQMHTV 127 (354) Q Consensus 53 ~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G-~a~~~~~~~----~dip~v~~~~~~~~~ 127 (354) +..... +.+...+++...+....++++.... ++.....+.+...+..+ .+.|.+..+ ...|..+...+.... T Consensus 165 g~lv~~--~~~~~~ii~~l~~~~~i~~~~~~~~-~~~~~~~~~ip~~~~~~~~a~~~~Eg~~~~~~~~~~s~~~f~~i~~ 241 (477) T protein:vir:84 165 GYAVPP--LWMMNRFIELARAGRTYANLCPTEP-LPGGTSSINIPKILTGTSTAIQAADNAALTAPSAHEVDLTDGFVQA 241 (477) T ss_pred ceeecc--chhHHHHHHHhhhcchHHHhhceee-ecCCcceeEEEEEecCcceeeeeccCcccccccccccccceeeEEE Confidence 322222 2345567777766666666665432 22233345555443322 234555543 345666667777888 Q ss_pred EEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceec---ccccccc Q lcl|NC_020082. 128 PLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSA---TKDYKTM 203 (354) Q Consensus 128 pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~---~~~w~~~ 203 (354) +.+.++.-+.+|.+=|+.+ ..++..--....+.+++..+|+.+++|+.. ....||+|.++++..+. +..|.. T Consensus 242 ~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~l~~~~~~~~d~~~l~G~Gt~~~p~Gi~~~~~~~~~~~~~~~~t~~~- 317 (477) T protein:vir:84 242 NVKTIAGQQGIAIQLLDQA---AVSVDEFVFRDLAADYANKLNVQVISGTGSNNQVVGVRATAGITQVTATSAGSALEK- 317 (477) T ss_pred eeeeEEeeeHHHHHHHhcc---chhHHHHHHHHHHHHHHHHHHHHHhccCCCCCccceeeeccccccccccccccchhh- Confidence 8888888777776555544 457888888899999999999999999864 46899999998765433 334433 Q ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHH--------HHHhcCceeecccccceE Q lcl|NC_020082. 204 NGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQ--------HFMEANSYTLLTGNELDI 275 (354) Q Consensus 204 T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~--------~l~~n~~~~~~~g~~l~I 275 (354) .+.++++|.+++..+.. ++...+...+|+|..|..|.+-. +..+.-+++ ...... ....+++-++ T Consensus 318 -~~~~~~~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~l~~lk--d~~G~~l~~~~~~~~~~~~~~~~--~~~~~~~~~l 390 (477) T protein:vir:84 318 -HQIIYQKIADAIQRVHT--SRFLEPEVIVMHPRRWASFHAIF--AGDDRPLIVPSGPGFNNLGVLTE--VASQRVVGQM 390 (477) T ss_pred -HHHHHHHHHHHHhhccc--cccCCccEEEEcHHHHHHHHHhh--ccCCCeeeecCcccccccccccc--cccccccchh Confidence 44566667776665542 34445667999999999886532 333221110 000000 0012222344 Q ss_pred EeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccccccc-CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 276 QIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMA-SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 276 ~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~-~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...|.+.+..... +.+.++....++|-+-.+.+...-.+.+...+--.. .....+.........-+|+|.||+.+-.+ T Consensus 391 ~G~pVv~s~~~p~-~~~~~~d~~~i~~gd~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~r~~~afv~~t~~ 469 (477) T protein:vir:84 391 HGLPVVTDPTLPT-TLGTGTDQDVIHVLRASDLALFESSVRMRALQETRAENLSVLLQVYGYLAFTAARFPQSVVEIGGT 469 (477) T ss_pred cccceEecCcccc-cccccCCcceEEEEEeceEEEEeeceeEEeccccccccceeeeeehhhhhhhhhccccceEEeecc Confidence 4555555543322 223323222344433334443332333333332221 22222222222333567889999987776 No 46 >protein:vir:4600 Length: 415 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058445;genbank:gi:9635171;genbank:GeneID:1262708 Probab=98.55 E-value=2e-08 Score=62.85 Aligned_cols=322 Identities=7% Similarity=-0.018 Sum_probs=153.8 Q ss_pred CcccccchHH--hh--------hccceeecCcc-c----------------cccccchhh----hhhhhhhcCCccccch Q lcl|NC_020082. 1 MAIKTIDAQT--IQ--------GNQWLVHKGYV-S----------------RNGDQWVIN----NTALDAIGNPNVMLDA 49 (354) Q Consensus 1 ~~~~~~~~~~--~~--------~~~~~~~~~~~-~----------------~~~~~~~~~----~~amda~~~~~~~~dA 49 (354) ..|+.++.+. ++ .+.-....... . ......... ......+. ...+.. T Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t 126 (415) T protein:vir:46 49 SQIQEKQEELDKLKEKDRTSENNQQSVEVNEARTYRNQANINDLGISIQNTKVTSQEVRDFTEYLETRNDIQ--GGSLKT 126 (415) T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccchhhhhHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhhhh--hccccc Confidence 0011000000 00 00000000000 0 000000000 00000000 001111 Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEE Q lcl|NC_020082. 50 DGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVP 128 (354) Q Consensus 50 ~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~p 128 (354) + .+..+.. +.+.+.|++........+.++.+.. ...+...+.+......+.+.+++..+. +|..+ ...+..... T Consensus 127 ~-~g~~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~Eg~~-~~~~~~~~~~~v~~~ 201 (415) T protein:vir:46 127 D-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELAVKPFFQLAYD 201 (415) T ss_pred c-CCccccc--HHHHHHHHHHHHhhhhhhhhcceee-ccCCceeEEEEEecCCcceeecccccc-cccccccceeeEEee Confidence 1 2233444 5667788888888888887766532 222222333333344455667766544 45433 467788888 Q ss_pred EEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHH Q lcl|NC_020082. 129 LGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQEL 208 (354) Q Consensus 129 v~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei 208 (354) .+.++..+.+|..=++. ...++..--....++++++.+|+.+++|+......+......... ..+... ...- T Consensus 202 ~~k~~~~~~iS~ell~d---s~~~l~~~i~~~l~~~i~~~~d~~il~g~g~g~~~~~~~~~~~~~----~~~~~~-~~~~ 273 (415) T protein:vir:46 202 INTHRGYFRISREAIED---AKVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEG----KKLEVK-KAKS 273 (415) T ss_pred eeeeEeeehhhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccccccccc----ceeccc-cccc Confidence 89999888888765543 345777888899999999999999999975443333322221111 111111 1122 Q ss_pred HHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccc Q lcl|NC_020082. 209 FNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAA 288 (354) Q Consensus 209 ~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~ 288 (354) +++|.+++.++... ...+..++|+|+.|..|.+.. +..|.-++ ..++ .++.+-.|...|........ T Consensus 274 ~~~i~~~~~~~~~~---~~~~~~~v~n~~~~~~L~~lk--d~~G~~i~----~~~~---~~~~~~~l~G~pV~~~~~~~- 340 (415) T protein:vir:46 274 LDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKMK--DKLGNYLI----QPDV---KEKTQQRLLGAKIEILPDEV- 340 (415) T ss_pred hHHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHhh--ccCCCeee----ccCc---CCCCCccccceeeEEecccc- Confidence 57778888777643 235779999999999996532 33333221 1111 12333344444443332211 Q ss_pred cccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 289 NGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 289 ~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .++.|... ++|-+=.+.+.+..-+.+++.............++.|+ ++.+.+|.++++++++ T Consensus 341 --~~~~~~~~-~~~gd~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 402 (415) T protein:vir:46 341 --LGQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred --ccCCCccE-EEEEehhccEEEEeecceEEEeeccccCceEEEEEEEe-ccEEeccccEEEEEee Confidence 12223222 23321112222222233333222112222334556776 5788899999999998 No 47 >protein:vir:4700 Length: 415 # NCBI annotation: phi PVL ORF 7 homologue # Family: family:all:21 # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061632;genbank:gi:9635719;genbank:GeneID:1262976 Probab=98.55 E-value=2e-08 Score=62.85 Aligned_cols=322 Identities=7% Similarity=-0.018 Sum_probs=153.8 Q ss_pred CcccccchHH--hh--------hccceeecCcc-c----------------cccccchhh----hhhhhhhcCCccccch Q lcl|NC_020082. 1 MAIKTIDAQT--IQ--------GNQWLVHKGYV-S----------------RNGDQWVIN----NTALDAIGNPNVMLDA 49 (354) Q Consensus 1 ~~~~~~~~~~--~~--------~~~~~~~~~~~-~----------------~~~~~~~~~----~~amda~~~~~~~~dA 49 (354) ..|+.++.+. ++ .+.-....... . ......... ......+. ...+.. T Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t 126 (415) T protein:vir:47 49 SQIQEKQEELDKLKEKDRTSENNQQSVEVNEARTYRNQANINDLGISIQNTKVTSQEVRDFTEYLETRNDIQ--GGSLKT 126 (415) T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccchhhhhHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhhhh--hccccc Confidence 0011000000 00 00000000000 0 000000000 00000000 001111 Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEE Q lcl|NC_020082. 50 DGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVP 128 (354) Q Consensus 50 ~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~p 128 (354) + .+..+.. +.+.+.|++........+.++.+.. ...+...+.+......+.+.+++..+. +|..+ ...+..... T Consensus 127 ~-~g~~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~Eg~~-~~~~~~~~~~~v~~~ 201 (415) T protein:vir:47 127 D-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELAVKPFFQLAYD 201 (415) T ss_pred c-CCccccc--HHHHHHHHHHHHhhhhhhhhcceee-ccCCceeEEEEEecCCcceeecccccc-cccccccceeeEEee Confidence 1 2233444 5667788888888888887766532 222222333333344455667766544 45433 467788888 Q ss_pred EEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHH Q lcl|NC_020082. 129 LGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQEL 208 (354) Q Consensus 129 v~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei 208 (354) .+.++..+.+|..=++. ...++..--....++++++.+|+.+++|+......+......... ..+... ...- T Consensus 202 ~~k~~~~~~iS~ell~d---s~~~l~~~i~~~l~~~i~~~~d~~il~g~g~g~~~~~~~~~~~~~----~~~~~~-~~~~ 273 (415) T protein:vir:47 202 INTHRGYFRISREAIED---AKVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEG----KKLEVK-KAKS 273 (415) T ss_pred eeeeEeeehhhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccccccccc----ceeccc-cccc Confidence 89999888888765543 345777888899999999999999999975443333322221111 111111 1122 Q ss_pred HHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccc Q lcl|NC_020082. 209 FNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAA 288 (354) Q Consensus 209 ~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~ 288 (354) +++|.+++.++... ...+..++|+|+.|..|.+.. +..|.-++ ..++ .++.+-.|...|........ T Consensus 274 ~~~i~~~~~~~~~~---~~~~~~~v~n~~~~~~L~~lk--d~~G~~i~----~~~~---~~~~~~~l~G~pV~~~~~~~- 340 (415) T protein:vir:47 274 LDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKMK--DKLGNYLI----QPDV---KEKTQQRLLGAKIEILPDEV- 340 (415) T ss_pred hHHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHhh--ccCCCeee----ccCc---CCCCCccccceeeEEecccc- Confidence 57778888777643 235779999999999996532 33333221 1111 12333344444443332211 Q ss_pred cccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 289 NGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 289 ~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .++.|... ++|-+=.+.+.+..-+.+++.............++.|+ ++.+.+|.++++++++ T Consensus 341 --~~~~~~~~-~~~gd~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 402 (415) T protein:vir:47 341 --LGQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred --ccCCCccE-EEEEehhccEEEEeecceEEEeeccccCceEEEEEEEe-ccEEeccccEEEEEee Confidence 12223222 23321112222222233333222112222334556776 5788899999999998 No 48 >protein:vir:97148 Length: 324 # NCBI annotation: ORF010 # Family: family:all:507 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239726;genbank:gi:66394880;genbank:GeneID:5130881 Probab=98.54 E-value=4.8e-08 Score=60.73 Aligned_cols=293 Identities=5% Similarity=-0.074 Sum_probs=155.9 Q ss_pred cCcccccccc---chhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEE Q lcl|NC_020082. 20 KGYVSRNGDQ---WVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMY 96 (354) Q Consensus 20 ~~~~~~~~~~---~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~ 96 (354) ...+++...+ +.......+.. .....+.++.++..+- +.+...+++........++++.+.. .+ ..+..+ T Consensus 1 ~~~~~~~~~~~~~f~~~~~~~~~~-~a~~~~~~~~~~~~iP---~~~~~~ii~~~~~~s~l~~~~~~~~-~~--~~~~~i 73 (324) T protein:vir:97 1 MEQTQKLKLNLQHFASNNVKPQVF-NPDNVMMHEKKDGTLM---NEFTTPILQEVMENSKIMQLGKYEP-ME--GTEKKF 73 (324) T ss_pred CccchhHHHHHHHHHHhhhhhhhh-ccccccccCCCcceec---hhHHHHHHHHHHhhcchhhhcceee-cc--CCceEE Confidence 1111111111 11111101110 0011122223333333 3455677777777777777766543 22 234566 Q ss_pred eeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeee Q lcl|NC_020082. 97 RSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFG 176 (354) Q Consensus 97 ~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G 176 (354) .+....+.+.|++..+ .+|..+...+......+.++.-..++.+-++.+ ..++...-....++++++.+|+.+++| T Consensus 74 p~~~~~~~a~~v~Eg~-~~~~~~~~f~~v~~~~~k~~~~~~is~ell~ds---~~~l~~~i~~~l~~aia~~~d~a~l~G 149 (324) T protein:vir:97 74 TFWADKPGAYWVGEGQ-KIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIAEAFYKKFDEAGILN 149 (324) T ss_pred EEEecCcceeEeccCc-cccccccceeEEEEeeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhhcc Confidence 7777778889998764 588888888888999999999899988555544 357888888999999999999999999 Q ss_pred ehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH Q lcl|NC_020082. 177 DSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV 255 (354) Q Consensus 177 ~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv 255 (354) +...+ ..|+++..........+ ..-+++|.+++.++... ...+..++|+|..|..|.+.. +..+..+ T Consensus 150 ~g~~~~~~gi~~~~~~~~~~~~~-------~~~~~~i~~~~~~l~~~---~~~~~~~v~n~~~~~~L~~lk--d~~g~~~ 217 (324) T protein:vir:97 150 QGNNPFGKSIAQSIEKTNKVIKG-------DFTQDNIIDLEALLEDD---ELEANAFISKTQNRSLLRKIV--DPETKER 217 (324) T ss_pred CCCCccCccccccccccceeccc-------cCCHHHHHHHHHhhhhc---cCCCCEEEEcHHHHHHHHHhh--cCCCcee Confidence 86543 35566554332211111 11257788888877642 345678999999999987532 3333222 Q ss_pred HHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc------CcceEEEeeccchhccccc------ Q lcl|NC_020082. 256 MQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK------SDRNLAMANPIPFRMLAPQ------ 323 (354) Q Consensus 256 l~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~------d~~~~~~~vp~~~~~~~~~------ 323 (354) +. .+.+-++...|........ .++..++.-+. +.+.+.+.+-......... T Consensus 218 ~~-----------~~~~~tl~G~PV~~~~~~~------~~~~~~~~gd~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~ 280 (324) T protein:vir:97 218 IY-----------DRNSDTLDGLPVVNLKSSN------LKRGELITGDFDKLIYGIPQLIEYKIDETAQLSTVKNEDGTP 280 (324) T ss_pred ec-----------CCCCccccceeeEeecCCC------CCcceEEEEecccEEEEEecCcEEEEeecccccccccccccc Confidence 10 1111223333322221110 11111111111 1111222221111100000 Q ss_pred ----ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 324 ----MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 324 ----~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .++ ...+.+..+++ +.+.+|.+++++..+ T Consensus 281 ~~~f~~d-~~~~r~~~r~d-~~v~~~~a~~~l~~~ 313 (324) T protein:vir:97 281 VNLFEQD-MVALRATMHVA-LHIADDKAFAKLVPA 313 (324) T ss_pred hhhhhcC-cEEEEEEEEec-cEEecccceEEEEec Confidence 011 23445567765 566679999999999 No 49 >protein:vir:9309 Length: 324 # NCBI annotation: head protein # Family: family:all:507 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803287;genbank:gi:29028597;genbank:GeneID:1258044 Probab=98.52 E-value=7e-08 Score=59.79 Aligned_cols=294 Identities=8% Similarity=-0.029 Sum_probs=156.9 Q ss_pred hhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCc Q lcl|NC_020082. 11 IQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEY 90 (354) Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~ 90 (354) .+.++-. ......+......++... ..-++..+.++..+- +.+..++++.....-..++++.+.. .+. T Consensus 1 ~~~~~~~------~~~~~~f~~~~~~~~~~~-a~~~~~~~~~~~liP---~~~~~~ii~~~~~~s~l~~l~~~~~-~~~- 68 (324) T protein:vir:93 1 MEQTQKL------KLNLQHFASNNVKPQVFN-PDNVMMHEKKDGTLL---NDFTTPILQEVMENSKIMQLGKYEP-MEG- 68 (324) T ss_pred CchhHHH------HHHHHHHHHhhhhhhhcc-cccccccCCCcceec---hhHHHHHHHHHHhhchhhhhcceee-ccC- Confidence 1111100 001111222222222211 111222222333333 3445677777766666777666543 222 Q ss_pred eeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhh Q lcl|NC_020082. 91 ADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQ 170 (354) Q Consensus 91 ~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n 170 (354) ..+.+.+....+.+.|++.. ..+|..+...+......+.++..+.++.+-++.+ ..++...-....++++++.+| T Consensus 69 -~~~~ip~~~~~~~a~~v~Eg-~~~~~~~~~f~~i~~~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~l~~aia~~~d 143 (324) T protein:vir:93 69 -TEKKFTFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIAEAFYKKFD 143 (324) T ss_pred -CceEEEEEecCcceeeecCC-ccccccccceeEEEEEeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHH Confidence 24566677777788898775 5578888888888899999998888887655544 346778888889999999999 Q ss_pred heeeeeehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCC Q lcl|NC_020082. 171 SVAYFGDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTG 249 (354) Q Consensus 171 ~~~f~G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~ 249 (354) +.+++|+...+ ..|+++.......... ...-++||.+++.++... ...+..++++|+.|..|.+.. + T Consensus 144 ~a~l~G~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~l~~~---~~~~~~~v~n~~~~~~L~~l~--d 211 (324) T protein:vir:93 144 EAGILNQGNNPFGKSIAQSIEKTNKVIK-------GDFTQDNIIDLEALLEDD---ELEANAFISKTQNRSLLRKIV--D 211 (324) T ss_pred HHHhcCCCCCCcCccccccccccceecc-------ccccHHHHHHHHHhhhhc---cCCCCEEEEcHHHHHHHHHhh--C Confidence 99999975432 3455544332211111 111267888888887642 345678999999999996532 3 Q ss_pred CCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccccc------ Q lcl|NC_020082. 250 YTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ------ 323 (354) Q Consensus 250 ~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~------ 323 (354) ..+.-++ . .+.+-++...|...... ...++..+++-+ ...+.+....+++.-... T Consensus 212 ~~G~~~~----~-------~~~~~~l~G~PVv~~~~------~~~~~~~i~~gd--fs~~~~~~~~~~~i~~~~~~~~~~ 272 (324) T protein:vir:93 212 PETKERI----Y-------DRNSDSLDGLPVVNLKS------SNLKRGELITGD--FDKLIYGIPQLIEYKIDETAQLST 272 (324) T ss_pred CCCCeee----c-------CCCCCcccceeeEeecC------CCCCcceEEEEe--cceEEEEEecCcEEEEeecccccc Confidence 3332211 1 11222233333222111 011122222212 222222222222221110 Q ss_pred ------------ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 324 ------------MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 324 ------------~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .++ ...+.+..++ |+.+.+|.+|+++..| T Consensus 273 ~~~~~~~~~~~f~~n-~~~~r~~~r~-d~~v~~~~a~~~l~~a 313 (324) T protein:vir:93 273 VKNEDGTPVNLFEQD-MVALRATMHV-ALHIADDKAFAKLVPA 313 (324) T ss_pred cccccccchhhhhcC-cEEEEEEEEe-ccEEecccceEEEecc Confidence 011 2455667776 5778889999999988 No 50 >protein:vir:4226 Length: 326 # NCBI annotation: observed 35.2Kd protein # Family: family:all:507 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039681;swissprot:sw:q05223;genbank:gi:9625447;uniprot:Q05223;genbank:GeneID:2942929 Probab=98.51 E-value=6.4e-08 Score=60.03 Aligned_cols=303 Identities=8% Similarity=-0.085 Sum_probs=156.1 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |+. ++..+.+.+..+. ..++++..++++..+.. .+-.++++...+.-..+++..+.. .+ .....+.+.... T Consensus 1 ~~~-~~~r~~~~~~~~e--~~a~~~~~~~~g~~ip~---~~~~~ii~~~~~~s~i~~~~~~~~-~~--~~~~~~p~~~~~ 71 (326) T protein:vir:42 1 MAV-NPDRTTPFLGVND--PKVAQTGDSMFEGYLEP---EQAQDYFAEAEKISIVQQFAQKIP-MG--TTGQKIPHWTGD 71 (326) T ss_pred CCC-CccchhhhcCcch--hhheeccccCCcceech---hhHHHHHHHHHhcchhhhhcceee-cc--CCceEEEEEeCC Confidence 332 1222222221111 22333333333444443 345667777777777777665543 22 234556666667 Q ss_pred CceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCc Q lcl|NC_020082. 103 TMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGM 182 (354) Q Consensus 103 G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi 182 (354) +.+.+++. +..+|..+...+......+.++..+.++.+=++.+ ..++..--....++++++.+|+.+|+|+...+- T Consensus 72 ~~a~~v~E-g~~~~~~~~~f~~i~~~~~k~~~~v~iS~ell~~s---~~~~~~~i~~~l~~a~~~~~d~a~l~G~gs~~p 147 (326) T protein:vir:42 72 VSASWIGE-GDMKPITKGNMTSQTIAPHKIATIFVASAETVRAN---PANYLGTMRTKVATAFAMAFDNAAINGTDSPFP 147 (326) T ss_pred cceEEecC-CccccccccceeEEEEeeEEEEEeehhhHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcc Confidence 77888876 46688888888889999999999888887555543 357888888899999999999999999887666 Q ss_pred eeeeecCCccce-eccccccccCHHHHHHHH--HHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHH Q lcl|NC_020082. 183 YGLFNNPNVTLS-SATKDYKTMNGQELFNML--NAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHF 259 (354) Q Consensus 183 ~GLlN~p~~~~~-~~~~~w~~~T~~ei~~di--~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l 259 (354) .|+++.+..... .......+ .+-...|+ ..++..+. ........++|+|..+..|.+-. +..+.-++.-- T Consensus 148 ~gi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~a~~v~n~~~~~~L~~lk--d~~G~~l~~~~ 220 (326) T protein:vir:42 148 TFLAQTTKEVSLVDPDGTGSN--ADLTVYDAVAVNALSLLV---NAGKKWTHTLLDDITEPILNGAK--DKSGRPLFIES 220 (326) T ss_pred ccccccccccceeeccccccc--ccchhHHHHHHHHHhhhh---hhccCccEEEEeHHHHHHHHHhh--ccCCceeeccc Confidence 788877653221 11222221 11122222 22333322 23344567999999999997532 33332221100 Q ss_pred HhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE------cCcceEEEeeccchh--ccccc---ccC-c Q lcl|NC_020082. 260 MEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD------KSDRNLAMANPIPFR--MLAPQ---MAS-L 327 (354) Q Consensus 260 ~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~------~d~~~~~~~vp~~~~--~~~~~---~~~-~ 327 (354) ..+.... ......+...|........ .++..++.-+ .+.+-+.+.+-.... ....+ +.+ . T Consensus 221 ~~~~~~~--~~~~~~l~G~pv~~~~~~~------~~~~~~~~Gd~s~~~~~~~~~~~v~~~~e~~~~~~~~~~~~~~~~~ 292 (326) T protein:vir:42 221 TYTEENS--PFRLGRIVARPTILSDHVA------SGTVVGYQGDFRQLVWGQVGGLSFDVTDQATLNLGTPQAPNFVSLW 292 (326) T ss_pred cccCccc--cccCceeeeeeEEEcCCCC------CCceEEEEeecceEEEEEecceEEEEeecceeeecccccccchhhh Confidence 0000000 0001123333333322211 1111111001 111222222211111 10000 000 0 Q ss_pred ---eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 328 ---GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 328 ---~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+.+..++ ++.+.+|.||+++... T Consensus 293 ~~d~~~~r~~~~~-d~~v~~~~a~~~l~~~ 321 (326) T protein:vir:42 293 QHNLVAVRVEAEY-AFHCNDKDAFVKLTNV 321 (326) T ss_pred hcCcEEEEEEEEe-ccEEecccceEEEeec Confidence 2455667776 5788999999998777 No 51 >protein:vir:78523 Length: 338 # NCBI annotation: Putative head structural protein # Family: family:all:507 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491585;genbank:gi:157786408;genbank:GeneID:5625675 Probab=98.50 E-value=1.3e-07 Score=58.39 Aligned_cols=302 Identities=9% Similarity=-0.081 Sum_probs=160.7 Q ss_pred cccccccchhhhhhhhhhcC-CccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGN-PNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~-~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~ 101 (354) |...++ +.-.+++. +.-.... .++..+- +.+-.++++...+.-..+++.++.. .+.+ ...+.+... T Consensus 1 ~~~~~e------~~~~~~~~~~~~~~~~-~~~~liP---~~~~~~ii~~~~~~s~l~~l~~~~~-~~~~--~~~ip~~~~ 67 (338) T protein:vir:78 1 MATLNE------LAPNTAGSNHQGRLAH-VPSDLLP---KEIVGPIFDKAQESSLVLRLGENIP-ISYG--ETIIPTTVK 67 (338) T ss_pred CcchHH------hhhhhcccccccceec-ccccccc---hHHHHHHHHHHHhhchhhhhcceee-ccCC--ceEEEEEec Confidence 221111 11111111 1101111 1112233 4556778888888888888877643 3333 233333332 Q ss_pred --------cCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhhee Q lcl|NC_020082. 102 --------VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVA 173 (354) Q Consensus 102 --------~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~ 173 (354) .+.+.++++. ..+|..+...+......+.++.-..++.+=++.+ ..++..--....++++++.+|+.+ T Consensus 68 ~~~a~~v~~~~~~~~~Eg-~~~~~~~~~f~~v~l~~~k~~~~~~is~ell~ds---~~~~~~~i~~~la~a~~~~~d~~~ 143 (338) T protein:vir:78 68 RPEVGQVGVGTSNEQREG-GTKPLSGTAWDTRSVAPIKLATIVTVSEEFARMN---PSGLYTKLQADLAYAIGRGIDLAV 143 (338) T ss_pred Cccceeeccccccccccc-ccccccccceeEEEEEEEEEEEeehhhHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHh Confidence 2334444443 4467667777778888888888888877544432 356777788899999999999999 Q ss_pred eeeehh---hCceeeeecCCccceec-cccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhcc-CC Q lcl|NC_020082. 174 YFGDSS---RGMYGLFNNPNVTLSSA-TKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQL-MT 248 (354) Q Consensus 174 f~G~~~---~gi~GLlN~p~~~~~~~-~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~-~~ 248 (354) ++|+.. .+..|++++......+. ...+ ......++++.+++..+... ....+..++|+|..+..|..-+ .. T Consensus 144 l~G~g~~~~~~~~gi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~m~~~~~~~L~~~~~l~ 219 (338) T protein:vir:78 144 FHGKSPLTGSALQGIDTNNVIVNTTNVDYLQ--TGTTPLLDRFLDGYDLVSAN--TDVDFNGWAADPRYRARLLRSQAYR 219 (338) T ss_pred hcccCCCcccccccccccccccccccccccc--ccchhhHHHHHHHHHHhhhh--ccccceEEEEchHHHHHHHHHhhhc Confidence 999864 35677877765543222 2222 22446688888888887643 3345678999999998885422 22 Q ss_pred CCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc------ Q lcl|NC_020082. 249 GYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP------ 322 (354) Q Consensus 249 ~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~------ 322 (354) +..+.-++.- ....+.+-+|...|...+..+........++...+.+- |-..+.+.....++.... T Consensus 220 d~~g~~l~~~-------~~~~~~~~~l~G~PV~~~~~ip~~~~~~~~~~~~~~~g-dfs~~~~~~~~~~~i~~~~~~~~~ 291 (338) T protein:vir:78 220 DANGNVDPTR-------INLAASAGDLLGLPVQFGKAVGGDLGAATDSKVRVVGG-DFSQLKYGFADEIRVKMSDTATLT 291 (338) T ss_pred cCCCceeecc-------cccCCCCceeeeeeEEEccccCccccccCCcccEEEEE-ecceEEEEeecccEEEEeeccccc Confidence 3333222110 01234455666666665544322211112222222221 111122222222221110 Q ss_pred -------cccCc----eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 323 -------QMASL----GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 323 -------~~~~~----~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +..++ ...+.++.++ |..+.+|.+|+++--+ T Consensus 292 ~~~~~~~~~~~~~~~~~~~~r~~~r~-d~~v~~~~a~~~l~~~ 333 (338) T protein:vir:78 292 DNTSPTPQTVSMWQTNQIAILIEVTF-GWLLGDKQAFVKFVDD 333 (338) T ss_pred ccccccccchhhhhcCcEEEEEEEEe-ccEeecccceEEEecc Confidence 11111 1345567776 5788999999998777 No 52 >protein:vir:103955 Length: 324 # NCBI annotation: head protein # Family: family:all:507 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873992;genbank:gi:118430767;genbank:GeneID:4525449 Probab=98.50 E-value=6.7e-08 Score=59.91 Aligned_cols=295 Identities=7% Similarity=-0.031 Sum_probs=155.2 Q ss_pred ccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhcc Q lcl|NC_020082. 3 IKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVP 82 (354) Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~ 82 (354) +|--+-.. ..-.++......++.- ....++..++++..+- +.+...|++.....-..+++++ T Consensus 1 ~~~~~~~~--------------~~~~~f~~~~~~~~~~-~a~~~~~~~~~~~liP---~~~~~~ii~~~~~~s~l~~~~~ 62 (324) T protein:vir:10 1 MEQTQKLK--------------LNLQHFASNNVKPQVF-NPDNVMMHEKKDGTLL---NDFTTPILQEVMENSKIMQLGK 62 (324) T ss_pred CCCchHHH--------------HHHHHHHHHhhcccee-cccceeccCCCcceec---hhHHHHHHHHHHhhchhhhhcc Confidence 11111100 0001111111111110 1111222222332332 3455677776666666777766 Q ss_pred ccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHH Q lcl|NC_020082. 83 MAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAF 162 (354) Q Consensus 83 v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~ 162 (354) +.. .+ ..++.+.+.+..+.+.|++.. ..+|..+...+......+.++....++.+-++.+ ..++...-....+ T Consensus 63 ~~~-~~--~~~~~~p~~~~~~~a~~v~Eg-~~~~~~~~~~~~v~~~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~l~ 135 (324) T protein:vir:10 63 YEP-ME--GTEKKFTFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIA 135 (324) T ss_pred eee-cc--CCceEEEEEeCCcceeEeccC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHH Confidence 543 22 224566777777888999875 4478888888888999999999999988666544 3467888888999 Q ss_pred HHHHHHhhheeeeeehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHH Q lcl|NC_020082. 163 RGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQ 241 (354) Q Consensus 163 ~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~ 241 (354) +++++.+|+.+++|+...+ -.|+++.......... ...-+++|.+++..+.. ....+..++++|..|.. T Consensus 136 ~ai~~~~d~a~l~G~g~~~~~~~i~~~~~~~~~~~~-------~~~t~~~i~~~~~~l~~---~~~~~~~~v~n~~~~~~ 205 (324) T protein:vir:10 136 EAFYKKFDEAGILNQGNNPFGKSIAQSIEKTNKVIK-------GDFTQDNIIDLEALLED---DELEANAFISKTQNRSL 205 (324) T ss_pred HHHHHHHHHHhhhcCCCCccCccccccccccceecc-------ccCCHHHHHHHHHhhhh---ccCCCCEEEEcHHHHHH Confidence 9999999999999975432 3455544322111111 11226778888887754 23456789999999999 Q ss_pred HhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcc- Q lcl|NC_020082. 242 ANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRML- 320 (354) Q Consensus 242 L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~- 320 (354) |.+-. +..+.-++ . .+.+-++...|....... ..++..++.-+ ...+.+....++++- T Consensus 206 L~~l~--d~~g~~~~---~--------~~~~~~l~G~PV~~~~~~------~~~~~~~~~gd--~~~~~~~~~~~~~i~~ 264 (324) T protein:vir:10 206 LRKIV--DPETKERI---Y--------DRNSDTLDGLPVVNLKSS------NLKRGELITGD--FDKLIYGIPQLIEYKI 264 (324) T ss_pred HHHhh--ccCCceee---c--------CCCCccccceeEEeecCC------CCCcceEEEEe--cccEEEEEecCcEEEE Confidence 86532 22222111 0 111222333333222111 11122222111 122222222222211 Q ss_pred -------ccc-c--------cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 321 -------APQ-M--------ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 321 -------~~~-~--------~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ... . ..=...+.+..+++ +.+.+|.+++++..+ T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~d-~~v~~~~A~~~l~~a 313 (324) T protein:vir:10 265 DETAQLSTVKNEDGTPVNLFEQDMVALRATMHVA-LHIADDKAFAKLVPA 313 (324) T ss_pred eecccccccccccccchhhhhcCcEEEEEEEEEc-cEEecccceEEEEec Confidence 100 0 01124555667775 566679999999998 No 53 >protein:vir:8102 Length: 543 # NCBI annotation: gp6 # Family: family:all:21 # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817683;genbank:gi:29566114;genbank:GeneID:1259308 Probab=98.50 E-value=4.4e-08 Score=60.93 Aligned_cols=318 Identities=12% Similarity=0.068 Sum_probs=155.9 Q ss_pred CcccccchHHhhhc-cceee--------------cCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGN-QWLVH--------------KGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEA 65 (354) Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~ 65 (354) -..+.+|.+..+.+ ..... ........... ..++..+... ..++++ ++ +++. +.+.+ T Consensus 197 ~~~~~~d~~e~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~e---~~~~~~~~~~-~~t~~~-gg-~lip--~~~~~ 268 (543) T protein:vir:81 197 KIIERFDDEDSTLARQCLATSSPAYLRAWSKMARNPHAAILTEEE---KRAINEVRAM-GLTKAD-GG-YLVP--FQLDP 268 (543) T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHhhHHHHhhhhh---hhhhhhhhhc-cccccc-Cc-ccCc--hhhhh Confidence 00111111111100 00000 00000000000 0112211111 122222 22 2332 23444 Q ss_pred HHHHhhhcc-ccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 66 TVYETPYGD-ITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 66 ~v~e~~~~~-l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) +++....++ -..+.+..+... .+ .+.+.+....+.+.|++..+ .+|..+..++........++..+.+|..=|+ T Consensus 269 ~ii~~~~~~~~~l~~~~~~~~~--~g--~~~~~~~~~~~~a~~v~Eg~-~~~~~~~~~~~i~~~~~k~~~~~~is~ell~ 343 (543) T protein:vir:81 269 TVIITSNGSLNDIRRFARQVVA--TG--DVWHGVSSAAVQWSWDAEFE-EVSDDSPEFGQPEIPVKKAQGFVPISIEALQ 343 (543) T ss_pred HHHHHHHhhhchhhhhcccccC--Cc--ceEEEEecCCcceeecccCc-cccccccccceeeeeeeeeEeeehhhHHHHh Confidence 555333333 334455544322 22 23445555667778887654 4787788888889999999999999885333 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) . ..++...-....++++++.+|+.+|+|+... ...|+++.+........ + ..+..-.++|+.+++..+.. T Consensus 344 d----~~~~~~~i~~~l~~~~~~~~d~ail~G~Gt~~~p~Gi~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~-- 414 (543) T protein:vir:81 344 D----EANVTETVALLFAEGKDELEAVTLTTGTGQGNQPTGIVTALAGTAAEIA--P-VTAETFALADVYAVYEQLAA-- 414 (543) T ss_pred c----cHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccchhhccccccccc--c-cccccccHHHHHHHHHhhhc-- Confidence 2 2378888888999999999999999998643 57899987754322111 1 11222346888888877753 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccc--cccCcceEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG--VSNSNKPRYMV 301 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g--~g~~g~d~~v~ 301 (354) .......++|+|..|..|.+.. +..|.=++.-+ ..|.+-+|...|.+......... ..+.|.. .|+ T Consensus 415 -~~~~~~~~v~n~~~~~~l~~lk--d~~G~~l~~~~--------~~g~~~~l~G~pv~~~~~~~~~~~~~~~~~~~-~i~ 482 (543) T protein:vir:81 415 -RHRRQGAWLANNLIYNKIRQFD--TQGGAGLWTTI--------GNGEPSQLLGRPVGEAEAMDANWNTSASADNF-VLL 482 (543) T ss_pred -cccCCcEEEEcHHHHHHHHHhh--cCCCceeccCc--------CCCCCccccceeeEEeccccccccccccCCcc-eEE Confidence 2223357999999999997543 32332111100 12223344444444443322111 1112222 233 Q ss_pred EEcCcceEEEeeccchhc--ccccccC-----ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 302 YDKSDRNLAMANPIPFRM--LAPQMAS-----LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 302 y~~d~~~~~~~vp~~~~~--~~~~~~~-----~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |- |...+.+..-..++. .+--... -...+..+.+++ +.+++|.||+++.++ T Consensus 483 ~g-d~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~d-~~v~~~~A~~~l~~~ 540 (543) T protein:vir:81 483 YG-NFQNYVIADRIGMTVEFIPHLFGTNRRPNGSRGWFAYYRMG-ADVVNPNAFRLLNVE 540 (543) T ss_pred Ee-eccceeEEeecccEEEEeccccccchhhcCceEEEEEEeec-cEeecccceEEEEec Confidence 31 222233332222222 1110000 123344466665 567889999999999 No 54 >protein:vir:100247 Length: 425 # NCBI annotation: gp76 # Family: family:all:21 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355412;genbank:gi:77864702;genbank:GeneID:3725969 Probab=98.47 E-value=2.9e-08 Score=61.89 Aligned_cols=323 Identities=9% Similarity=0.062 Sum_probs=165.0 Q ss_pred Cccc----ccchHH---hhhccceeecCccccccccchhhhhhhhhhc-----CCccccchhhhhHHHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIK----TIDAQT---IQGNQWLVHKGYVSRNGDQWVINNTALDAIG-----NPNVMLDADGGIAFYISQLAGIEATVY 68 (354) Q Consensus 1 ~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~amda~~-----~~~~~~dA~~~~~fl~~~L~~id~~v~ 68 (354) -.++ .+|... .+.+.+- .+.......+.. . +++... ...+.....+.+.+++. +.+.+.++ T Consensus 79 ~ei~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~--af~~~l~~~e~~~al~~~t~~~gG~lvP--~~~~~~ii 151 (425) T protein:vir:10 79 ADLEALQAAVDEANIKIAAAQMGA--NGVKPLRDPEYT-E--AFKAHVKRGDVQAALNKGEDSEGGYLTP--IEWDRTIT 151 (425) T ss_pred HHHHHHHHHHHHHHHHHHhhhccc--ccccccccHHHH-H--HHHHHhhhhhhHHHhhcCcCCCCceecc--HhHHHHHH Confidence 0000 011000 0011110 111000000000 0 111000 00111112233445555 56778888 Q ss_pred HhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHHHHHHH Q lcl|NC_020082. 69 ETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDEMRKSA 147 (354) Q Consensus 69 e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~El~~a~ 147 (354) +.....-..++++.+..- +.+ ...+.+....+.+.|++... .+|..+ ...+......+.++.-..+|.+=|+. T Consensus 152 ~~~~~~s~l~~l~~~~~~-~~~--~~~~~~~~~~~~a~wv~E~~-~~~~~~~~~f~~v~~~~~k~~~~i~iS~ell~d-- 225 (425) T protein:vir:10 152 NKLVLISPMRQLCRVQPV-SKA--GFSKLFNMGGTTSGWVGEAS-QRPQTNAATFQPLSFASGEIYANPAATQQILDD-- 225 (425) T ss_pred HHHHhhhhhhhhceeeec-cCC--ceEEEEEcCCcceeeecccc-ccccccccccceeeeeheeeEeehHhHHHHHhc-- Confidence 888877777777665432 222 23344444455677877653 356554 35677777888888877787654443 Q ss_pred HhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccc---c----ccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 148 AMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDY---K----TMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 148 ~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w---~----~~T~~ei~~di~~~~~~l~ 220 (354) ...++...-....++++++.+|+.+++|+......|++|++..........| . ..+..--+++|.+++..|. T Consensus 226 -s~~~l~~~i~~~la~ai~~~~d~~~l~G~G~~~p~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~l~~~l~ 304 (425) T protein:vir:10 226 -AEIDLESWLATEVQTEFAKQEGKAFLAGDGTNKPNGLLTYIAGGANAAKHPFGAIEVVNSGAAADITSDGIIDLVYDLP 304 (425) T ss_pred -chhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcceeeeccccccccccccccccccccccccccccHHHHHHHHhhhh Confidence 3567888888999999999999999999987788999998875443322221 1 1122234677777777764 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. ....-.++|+|..|..|.+- -+..|.-++ ..+ ...|.+-+|...|.+........ + .+.+. | T Consensus 305 ~~---~~~~a~~vmn~~~~~~L~~l--kD~~G~~l~----~~~---~~~g~~~~l~G~PV~~~~~~p~~--~-~~~~~-i 368 (425) T protein:vir:10 305 SA---FTGNARFAMNRNTQRQVRKL--KDGQGNYLW----QPS---YVAGQPATLAGYPVTEVPDMPDV--A-ANSTP-I 368 (425) T ss_pred hh---hccCCEEEEchHHHHHHHHh--hcCCCceee----ccC---ccCCCCceecceeeEEecCcCCc--c-CCccE-E Confidence 32 23445789999999998653 244443221 111 11233444555555554433222 1 22232 2 Q ss_pred EEEcCcceEEEeeccchhccccccc-CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAPQMA-SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~~~~-~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|-+-.+.+.+..-..++.+.-..- .-...+..+.|++ +.+.+|.+++.+-++ T Consensus 369 ~~Gd~~~~~~i~~~~~~~v~~d~~~~~~~~~~~~~~r~d-~~v~~~~A~~~l~~~ 422 (425) T protein:vir:10 369 LFGDFQQTYLIIDRIGVRVLRDPYTAKPYVLFYTTKRVG-GGLLNPEPMRAMKVA 422 (425) T ss_pred EEEehhccEEEEEecceEEEecccccCCcEEEEEEEEec-cEeecccceEEEEee Confidence 3311112122221122222211111 1123445667765 667779999999999 No 55 >protein:vir:78830 Length: 324 # NCBI annotation: major head protein # Family: family:all:507 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285361;genbank:gi:148717889;genbank:GeneID:5246961 Probab=98.45 E-value=1.6e-07 Score=57.86 Aligned_cols=290 Identities=7% Similarity=-0.073 Sum_probs=157.5 Q ss_pred cCccccccccchhhhhhhhhh----cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEE Q lcl|NC_020082. 20 KGYVSRNGDQWVINNTALDAI----GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWM 95 (354) Q Consensus 20 ~~~~~~~~~~~~~~~~amda~----~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~ 95 (354) ...++.+..+... .+-+.. ......+..+.++. +.. +.+...+++.....-..+.++++.. .+. .++. T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~-~iP--~~~~~~ii~~~~~~s~l~~l~~~~~-~~~--~~~~ 72 (324) T protein:vir:78 1 MEQTQKLKLNLQH--FASNNVKPQVFNPDNVMMHEKKDG-TLM--NEFTTPILQEVMENSKIMQLGKYEP-MEG--TEKK 72 (324) T ss_pred CCcchhhhHHHHH--HHHHhhhhhhhccccccccCcCcc-ccc--hhHHHHHHHHHHhhchhhhhcceee-ccC--CceE Confidence 2222222221110 111110 01111122222333 332 3455677777777777777776543 222 2455 Q ss_pred EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee Q lcl|NC_020082. 96 YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF 175 (354) Q Consensus 96 ~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~ 175 (354) +.+....+.+.|++.. ..+|..+...+......+.++....++.+=++.+ ..++...-....++++++.+|+.+|+ T Consensus 73 ~p~~~~~~~a~~v~Eg-~~~~~~~~~~~~v~~~~~k~~~~~~is~ell~ds---~~~l~~~i~~~la~ai~~~~d~a~l~ 148 (324) T protein:vir:78 73 FTFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIAEAFYKKFDEAGIL 148 (324) T ss_pred EEEEecCcceeEecCC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 6677777788898874 5578888888889999999998888887655544 35688888899999999999999999 Q ss_pred eehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCch Q lcl|NC_020082. 176 GDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRT 254 (354) Q Consensus 176 G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~T 254 (354) |....+ -.|+++..+.......+ ..-+++|.+++.++.. ....+..++|+|+.+..|.+.. +..+.. T Consensus 149 G~g~~~~~~gi~~~~~~~~~~~~~-------~~t~~~i~~~~~~l~~---~~~~~~~~vmn~~~~~~L~~l~--d~~G~~ 216 (324) T protein:vir:78 149 NQGNNPFGKSIAQSIEKTNKVIKG-------DFTQDNIIDLEALLED---DELEANAFISKTQNRSLLRKIV--DPETKE 216 (324) T ss_pred cCCCCCcCccccccccccceeccc-------cccHHHHHHHHHhhhh---ccCCCCEEEEcHHHHHHHHHhh--ccCCCe Confidence 975433 34555544432221111 1126788888887754 2345678999999999996532 333322 Q ss_pred HHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc------------ Q lcl|NC_020082. 255 VMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP------------ 322 (354) Q Consensus 255 vl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~------------ 322 (354) ++ . .+.+-++...|....... ..++..++.-+ ...+-+.....++.-.. T Consensus 217 ~~----~-------~~~~~~l~G~PV~~~~~~------~~~~~~~~~gd--~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 277 (324) T protein:vir:78 217 RI----Y-------DRNSDSLDGLPVVNLKSS------NLKRGELITGD--FDKLIYGIPQLIEYKIDETAQLSTVKNED 277 (324) T ss_pred ee----c-------CCCCCcccceeeEeeCCC------CCCcceEEEEe--cceEEEEEecCcEEEEeeccccccccccc Confidence 11 1 122223333333222111 11121222211 11121222222211100 Q ss_pred -c-----ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 323 -Q-----MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 323 -~-----~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . .++ ...+.+..++ |+.+.+|.||+++-.| T Consensus 278 ~~~~~~f~~d-~~~~r~~~r~-d~~v~~~~A~~~l~~a 313 (324) T protein:vir:78 278 GTPVNLFEQD-MVALRATMHV-ALHIADDKAFAKLVPA 313 (324) T ss_pred ccchhhhhcC-cEEEEEEEEE-ccEEecccceEEEecc Confidence 0 011 2444556666 5777789999999988 No 56 >protein:vir:96392 Length: 324 # NCBI annotation: ORF011 # Family: family:all:507 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239648;genbank:gi:66395381;genbank:GeneID:5132868 Probab=98.45 E-value=1.6e-07 Score=57.86 Aligned_cols=290 Identities=7% Similarity=-0.073 Sum_probs=157.5 Q ss_pred cCccccccccchhhhhhhhhh----cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEE Q lcl|NC_020082. 20 KGYVSRNGDQWVINNTALDAI----GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWM 95 (354) Q Consensus 20 ~~~~~~~~~~~~~~~~amda~----~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~ 95 (354) ...++.+..+... .+-+.. ......+..+.++. +.. +.+...+++.....-..+.++++.. .+. .++. T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~-~iP--~~~~~~ii~~~~~~s~l~~l~~~~~-~~~--~~~~ 72 (324) T protein:vir:96 1 MEQTQKLKLNLQH--FASNNVKPQVFNPDNVMMHEKKDG-TLM--NEFTTPILQEVMENSKIMQLGKYEP-MEG--TEKK 72 (324) T ss_pred CCcchhhhHHHHH--HHHHhhhhhhhccccccccCcCcc-ccc--hhHHHHHHHHHHhhchhhhhcceee-ccC--CceE Confidence 2222222221110 111110 01111122222333 332 3455677777777777777776543 222 2455 Q ss_pred EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee Q lcl|NC_020082. 96 YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF 175 (354) Q Consensus 96 ~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~ 175 (354) +.+....+.+.|++.. ..+|..+...+......+.++....++.+=++.+ ..++...-....++++++.+|+.+|+ T Consensus 73 ~p~~~~~~~a~~v~Eg-~~~~~~~~~~~~v~~~~~k~~~~~~is~ell~ds---~~~l~~~i~~~la~ai~~~~d~a~l~ 148 (324) T protein:vir:96 73 FTFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYT---YSQFFEEMKPMIAEAFYKKFDEAGIL 148 (324) T ss_pred EEEEecCcceeEecCC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 6677777788898874 5578888888889999999998888887655544 35688888899999999999999999 Q ss_pred eehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCch Q lcl|NC_020082. 176 GDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRT 254 (354) Q Consensus 176 G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~T 254 (354) |....+ -.|+++..+.......+ ..-+++|.+++.++.. ....+..++|+|+.+..|.+.. +..+.. T Consensus 149 G~g~~~~~~gi~~~~~~~~~~~~~-------~~t~~~i~~~~~~l~~---~~~~~~~~vmn~~~~~~L~~l~--d~~G~~ 216 (324) T protein:vir:96 149 NQGNNPFGKSIAQSIEKTNKVIKG-------DFTQDNIIDLEALLED---DELEANAFISKTQNRSLLRKIV--DPETKE 216 (324) T ss_pred cCCCCCcCccccccccccceeccc-------cccHHHHHHHHHhhhh---ccCCCCEEEEcHHHHHHHHHhh--ccCCCe Confidence 975433 34555544432221111 1126788888887754 2345678999999999996532 333322 Q ss_pred HHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc------------ Q lcl|NC_020082. 255 VMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP------------ 322 (354) Q Consensus 255 vl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~------------ 322 (354) ++ . .+.+-++...|....... ..++..++.-+ ...+-+.....++.-.. T Consensus 217 ~~----~-------~~~~~~l~G~PV~~~~~~------~~~~~~~~~gd--~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 277 (324) T protein:vir:96 217 RI----Y-------DRNSDSLDGLPVVNLKSS------NLKRGELITGD--FDKLIYGIPQLIEYKIDETAQLSTVKNED 277 (324) T ss_pred ee----c-------CCCCCcccceeeEeeCCC------CCCcceEEEEe--cceEEEEEecCcEEEEeeccccccccccc Confidence 11 1 122223333333222111 11121222211 11121222222211100 Q ss_pred -c-----ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 323 -Q-----MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 323 -~-----~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . .++ ...+.+..++ |+.+.+|.||+++-.| T Consensus 278 ~~~~~~f~~d-~~~~r~~~r~-d~~v~~~~A~~~l~~a 313 (324) T protein:vir:96 278 GTPVNLFEQD-MVALRATMHV-ALHIADDKAFAKLVPA 313 (324) T ss_pred ccchhhhhcC-cEEEEEEEEE-ccEEecccceEEEecc Confidence 0 011 2444556666 5777789999999988 No 57 >protein:vir:99749 Length: 324 # NCBI annotation: head protein # Family: family:all:507 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004307;genbank:gi:122891761;genbank:GeneID:4712304 Probab=98.45 E-value=1.4e-07 Score=58.21 Aligned_cols=291 Identities=7% Similarity=-0.042 Sum_probs=156.2 Q ss_pred cCcccccc---ccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEE Q lcl|NC_020082. 20 KGYVSRNG---DQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMY 96 (354) Q Consensus 20 ~~~~~~~~---~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~ 96 (354) ...+.... ..+......++.- ....++..+.++..+- +.+..++++.....-..++++.+.. .+ ..++.+ T Consensus 1 ~~k~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~~lip---~~~~~~ii~~~~~~s~l~~~~~~~~-~~--~~~~~~ 73 (324) T protein:vir:99 1 MEQTQKLKLNLQHFASNNVKPQVF-NPDNVMMHEKKDGTLL---NDFTTPILQEVMENSKIMRLGKYEP-ME--GTEKKF 73 (324) T ss_pred CCCchHhhHHHHHHHHHhhhhhhc-cccceeccCCCcceec---hhHHHHHHHHHHhhchhhhhcceee-cc--CCceEE Confidence 11111110 0111111111111 1111222233333232 3455677776666666777766543 22 224566 Q ss_pred eeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeee Q lcl|NC_020082. 97 RSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFG 176 (354) Q Consensus 97 ~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G 176 (354) .+....+.+.|++.. ..+|..+...+......+.++....++.+-++.+. .++...-....++++++.+|+.+++| T Consensus 74 p~~~~~~~a~~v~Eg-~~~~~~~~~~~~v~~~~~k~~~~~~iS~ell~ds~---~~l~~~i~~~l~~ai~~~~d~~~l~G 149 (324) T protein:vir:99 74 TFWADKPGAYWVGEG-QKIETSKATWVNATMRAFKLGVILPVTKEFLNYTY---SQFFEEMKPMIAEAFYKKFDEAGILN 149 (324) T ss_pred EEEecCcceeEeccC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHhhhc Confidence 677677888999875 55888888888899999999999999886666553 46788888899999999999999999 Q ss_pred ehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH Q lcl|NC_020082. 177 DSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV 255 (354) Q Consensus 177 ~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv 255 (354) +...+ ..|+++.......... ...-+++|.+++..|.. ....+..++++|..|..|.+-. +..+.-+ T Consensus 150 ~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~l~~---~~~~~~~~v~n~~~~~~L~~l~--d~~g~~~ 217 (324) T protein:vir:99 150 QGNNPFGKSIAQSIEKTNKVIK-------GDFTQDNIIDLEALLED---DELEANAFISKTQNRSLLRKIV--DPETKER 217 (324) T ss_pred CCCCccCccccccccccceecc-------ccCCHHHHHHHHHhhhh---ccCCCCEEEEcHHHHHHHHHhh--cCCCcee Confidence 76542 3455544332111111 11226778888888754 2345668999999999986432 3233211 Q ss_pred HHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccc--------cc-c-- Q lcl|NC_020082. 256 MQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLA--------PQ-M-- 324 (354) Q Consensus 256 l~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~--------~~-~-- 324 (354) + . .+.+-++...|....... ..++..++.- |...+.+.+...++.-. .. . T Consensus 218 ~---------~--~~~~~~l~G~PVv~~~~~------~~~~~~~i~g--d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (324) T protein:vir:99 218 I---------Y--DRNSDTLDGLPVVNLKSS------NLKRGELITG--DFDKLIYGIPQLIEYKIDETAQLSTVKNEDG 278 (324) T ss_pred e---------c--CCCCccccceeEEeecCC------CCCcceEEEE--ecccEEEEEecCcEEEEeecccccccccccc Confidence 1 0 111222333333222111 1112222211 12222232222222211 00 0 Q ss_pred -------cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 325 -------ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 325 -------~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++ ...+.+..+++ +.+.+|.+|+.+..+ T Consensus 279 ~~~~~f~~~-~~~~r~~~r~d-~~v~~~~a~~~lt~a 313 (324) T protein:vir:99 279 TPVNLFEQD-MVALRATMHVA-LHIADDKAFAKLVPA 313 (324) T ss_pred cchhhhhcC-cEEEEEEEEEc-cEEecccceEEEEec Confidence 11 24555667775 666689999999999 No 58 >protein:vir:9410 Length: 415 # NCBI annotation: head protein # Family: family:all:21 # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803388;genbank:gi:29028700;genbank:GeneID:1258136 Probab=98.43 E-value=4e-08 Score=61.14 Aligned_cols=318 Identities=6% Similarity=-0.019 Sum_probs=152.7 Q ss_pred CcccccchHH------------------------------------hhhccceeecCcc-----ccccccchhhhhhhhh Q lcl|NC_020082. 1 MAIKTIDAQT------------------------------------IQGNQWLVHKGYV-----SRNGDQWVINNTALDA 39 (354) Q Consensus 1 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~-----~~~~~~~~~~~~amda 39 (354) --++.|+.+. -....+....+.. -..+.+..... .++ T Consensus 42 ~ei~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~--~~~ 119 (415) T protein:vir:94 42 QEITDLRSQIQEKQEELDKLKEKDGTSENNQQSVEVNEASTYRNQANINDLGISIQNTKVTSQEVRDFTEYLETR--NDI 119 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhhh--hhh Confidence 0000000000 0000000000000 00000000000 000 Q ss_pred hcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 40 IGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 40 ~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) . ...++.. .+.++.. +.+.+.+++........++++.+.. .+.+...+.+......+.+.+++..++ +|-.+ T Consensus 120 ~---~~~~~~~-~g~~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~Eg~~-~~~~~ 191 (415) T protein:vir:94 120 Q---GGSLKTD-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELA 191 (415) T ss_pred h---hhccccc-cccccCc--HHHHHHHHHHHHhhhhhhhhcceee-ccCCceeEEEEeecCCccceecccccc-ccccc Confidence 0 0011111 2223333 5677888888888888888776543 233333444455555566777766544 45333 Q ss_pred -eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceee-eecCCccceecc Q lcl|NC_020082. 120 -QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGL-FNNPNVTLSSAT 197 (354) Q Consensus 120 -~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GL-lN~p~~~~~~~~ 197 (354) ...+.....++.++.-+.+|.+=++.+ ..++...-....++++.+.+|+.+++|+......+. .+.......... T Consensus 192 ~~~~~~i~~~~~k~~~~~~is~ell~ds---~~~~~~~i~~~l~~~~~~~~~~~il~g~g~g~~~~~~~~~~~~~~~~~~ 268 (415) T protein:vir:94 192 VKPFFQLAYDINTHRGYFRISREAIEDA---KVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEGKKLEV 268 (415) T ss_pred cccceeeEeeheeeeeechhhHHHHhhc---hHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccccccccccccccc Confidence 457788888888888888877544433 457778888899999999999999999764332222 221111111111 Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEe Q lcl|NC_020082. 198 KDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQI 277 (354) Q Consensus 198 ~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~ 277 (354) + ...-+++|.+++..+... ...+..++|+|+.|..|.+.. +..|.-++ ..++ .++.+-.|.. T Consensus 269 ~------~~~~~~~i~~~~~~~~~~---~~~~~~~vmn~~~~~~l~~lk--d~~G~~l~----~~~~---~~~~~~~l~G 330 (415) T protein:vir:94 269 K------KAKSLDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKMK--DKLGNYLI----QPDV---KEKTQQRLLG 330 (415) T ss_pred c------cccchHHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHhh--ccCCCeee----ccCc---CCCCCceecc Confidence 1 112267788888777542 235789999999999997532 43443221 1111 1222233444 Q ss_pred eceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 278 RFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 278 ~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .|......... +..|... ++|-+=.+.+.+..-..+++..............+.++ ++.+.+|.+++++++. T Consensus 331 ~pV~~~~~~~~---~~~~~~~-i~~gd~~~~~~~~~~~~~~v~~~~~~~~~~~~r~~~r~-d~~~~~~~a~~~~~~~ 402 (415) T protein:vir:94 331 AKIEILPDEVL---GQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred eeeEEeccccc---CCCCccE-EEEEehhccEEEEeecceEEEEeccccCceEEEEEEEe-ccEEeccccEEEEEEe Confidence 44333322211 1122222 22211112222222233333222112222333456666 5778889999999998 No 59 >protein:vir:100135 Length: 418 # NCBI annotation: gp5 # Family: family:all:585 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945035;genbank:gi:38707895;genbank:GeneID:2744182 Probab=98.41 E-value=7.9e-08 Score=59.53 Aligned_cols=313 Identities=11% Similarity=0.132 Sum_probs=158.6 Q ss_pred CcccccchHHhhhc--cceeec--------------Ccccccccc--chhh-hhhhhhhcCCccccchhhhhHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGN--QWLVHK--------------GYVSRNGDQ--WVIN-NTALDAIGNPNVMLDADGGIAFYISQLA 61 (354) Q Consensus 1 ~~~~~~~~~~~~~~--~~~~~~--------------~~~~~~~~~--~~~~-~~amda~~~~~~~~dA~~~~~fl~~~L~ 61 (354) -.++.++...-... .....+ +...+.-.. .... ..+... .....++..+++. +.. + T Consensus 75 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~-lvp--~ 149 (418) T protein:vir:10 75 ARLLEAEQKLARGGGSAELETPKTLGQLVTESEEMKGMDGSARKSVRVRVDRKSIMNV--PATVGSGVSGSNS-LVV--A 149 (418) T ss_pred HHHHHHHHHHhhcccccccchhhhhhHHhhhHHHHHHHHHHHhhhhhhhhHHHHHHHh--hhhccCCCCCCcc-ccc--h Confidence 00000000000000 000000 000000000 0000 000000 0011112222333 333 4 Q ss_pred HHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc-cCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 62 GIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG-VTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 62 ~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~-~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~ 140 (354) .+.+.+++........++++++..-.+ .++.+..... .+.+.|++..+ .+|..+...+......+.++..+.+|. T Consensus 150 ~~~~~ii~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~a~~v~E~~-~~~~~~~~f~~v~~~~~k~~~~~~is~ 225 (418) T protein:vir:10 150 DRQAGIIAPPQRKMTIRDLLMPGQTSS---SSIEYTVETGFTNNAAAVAEGA-QKPTSDLKFNLKNQPVRTIAHLFKASR 225 (418) T ss_pred hHHHHHHHHHhhhhhHHhhcceeeccC---CceeEEEEecCCCceeeeccCc-cccccccceeeEEEeeeeEEEeehhhH Confidence 566678888888888888776543222 2344444333 45667877654 477777788888888899998888887 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh-CceeeeecCCccceeccccccccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR-GMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSV 219 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~-gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l 219 (354) .=|+.+ . ++..--....++++++.+|+.+++|+... ...||++..+....+.+.. ...-+++|.+++..+ T Consensus 226 ell~ds---~-~l~~~i~~~l~~a~~~~~d~a~l~G~g~~~~p~Gi~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~ 296 (418) T protein:vir:10 226 QILDDA---P-ALQSYIDGRARYGLQLTEEGQILKGDGTGANILGILPQASAFMPSITLA-----NATPIDKIRLALLQA 296 (418) T ss_pred HHHHhH---H-HHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccccccccccccccc-----ccccHHHHHHHHHhh Confidence 644433 2 57777888899999999999999998654 4789999987654332211 112367777777776 Q ss_pred HHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEE Q lcl|NC_020082. 220 INLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRY 299 (354) Q Consensus 220 ~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~ 299 (354) .. ....+..++|+|..|..|.+.. +..|.-++. ++. .+.+-.|...|.+.+..... |+ . T Consensus 297 ~~---~~~~~~~~v~n~~~~~~L~~lk--d~~G~~i~~-----~~~---~~~~~~l~G~pV~~~~~~p~------~~--~ 355 (418) T protein:vir:10 297 VL---AEFPATGIVLNPIDWASIELTK--DSQGRYIVG-----NPV---NGTTPRLWNLPVVETQAMTA------NE--F 355 (418) T ss_pred cc---ccCCCCEEEEcHHHHHHHHHhh--cCCCceecc-----ccc---cCCCceecceeeEEcCCCCC------Cc--E Confidence 53 2345568999999999996543 333432221 111 12223444455544433211 11 1 Q ss_pred EEEEcCcceEEEeeccchhcccc-ccc----CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMANPIPFRMLAP-QMA----SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~vp~~~~~~~~-~~~----~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.-+.+ +.+.+..-+.++...- +.. .-...+.++.+++ +.+++|.++++++++ T Consensus 356 ~~gd~s-~~~~~~~~~~~~i~~~~~~~~~f~~~~~~~r~~~~~d-~~~~~~~a~~~~~~~ 413 (418) T protein:vir:10 356 LVGAFS-MAAQIFDRMEIEVLLSTENVDDFEKNMVSIRAEERLA-LAVYRPESFVTGALV 413 (418) T ss_pred EEeecc-ceEEEEEecceEEEEecccchhhhcCceEEEEEEeec-cEEecccceEEEEec Confidence 111111 1122211122222111 111 1123445567776 569999999999999 No 60 >protein:vir:2430 Length: 318 # NCBI annotation: major head subunit # Family: family:all:507 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046832;genbank:gi:9630400;genbank:GeneID:1261582 Probab=98.40 E-value=9.1e-08 Score=59.18 Aligned_cols=293 Identities=8% Similarity=-0.030 Sum_probs=153.0 Q ss_pred ccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccC Q lcl|NC_020082. 24 SRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVT 103 (354) Q Consensus 24 ~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G 103 (354) -.....++-.+.+|-. +.+.+ ++..+- +.+..++++...+.-..+++..+.. .+ .....+.+....+ T Consensus 1 ~~~~~~~~~e~~~~~~------~~~~~-~~~~ip---~~~~~~ii~~~~~~~~l~~~~~~~~-~~--~~~~~ip~~~~~~ 67 (318) T protein:vir:24 1 MAAGTAFAVDHAQIAQ------TGDTM-FKGYLE---PEQAKDYFAEAEKTSIVQQFAQKVP-MG--TTGQKIPHWVGDV 67 (318) T ss_pred CCCCCCCCHHHHHhhc------ccCcc-cceeec---hhHHHHHHHHHHhhchhhhhcceee-cc--CCceEEEEEeCCc Confidence 1111222222222211 11112 222333 3455677777777766677765543 22 2345566666677 Q ss_pred ceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCce Q lcl|NC_020082. 104 MGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMY 183 (354) Q Consensus 104 ~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~ 183 (354) .+.|++.. ..+|..+...+......+.++....++.+=|+.. ..++...-....++++++.+|+.+++|+....-. T Consensus 68 ~a~~v~Eg-~~~~~~~~~f~~i~~~~~k~~~~~~iS~e~l~ds---~~~~~~~i~~~l~~~~~~~~d~a~l~G~g~~~~~ 143 (318) T protein:vir:24 68 SAQWIGEG-DMKPITKGNMTSQTIAPHKIATIFVASAETVRAN---PANYLGTMRTKVATAFAMAFDGAAMHGTDSPFPT 143 (318) T ss_pred ceEEecCC-ccccccccceeEEEEeeEEEEEeehhhHHHhhcC---hHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCc Confidence 88898764 5578778888888888899998888887655543 3468888888999999999999999998654445 Q ss_pred eeeecCCc-cceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhc Q lcl|NC_020082. 184 GLFNNPNV-TLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEA 262 (354) Q Consensus 184 GLlN~p~~-~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n 262 (354) |+++.... ........ .....+++.+++..+.. ....+..++|+|+.|..|.+.. +..+..++.-...+ T Consensus 144 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~~~~~~ 213 (318) T protein:vir:24 144 YIGQTTKAISIADTTGA-----TTVYDQVAVNGLSLLVN---DGKKWTHTLLDDITEPILNGAK--DQNGRPLFIESTYG 213 (318) T ss_pred ccccccccccccccccc-----cchHHHHHHHHHHhhcc---ccCCCCEEEEcHHHHHHHHHhh--ccCCceeecCcccc Confidence 66554322 11111111 01112344555554432 3455678999999999997533 33333322111111 Q ss_pred CceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccccc-------------ccCc-- Q lcl|NC_020082. 263 NSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ-------------MASL-- 327 (354) Q Consensus 263 ~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~-------------~~~~-- 327 (354) +......+. .+...|....... ..|+...+.-+ ...+-+.....++..... +.++ T Consensus 214 ~~~~~~~~~--~i~g~pv~~~~~~------~~~~~~~~~gd--fs~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~f~ 283 (318) T protein:vir:24 214 EAASPFRSG--RIVARPTILSDHV------VEGTTVGFMGD--FSQLIWGQIGGLSFDVTDQATLNLGTVESPNFVSLWQ 283 (318) T ss_pred CccccccCc--eEEEEeeEEeCCC------CCCccEEEEee--cceEEEEEecCeEEEEeeccceeccccccccchhhhh Confidence 111011111 2333333322211 12333222212 111222222222111100 0011 Q ss_pred --eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 328 --GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 328 --~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+.+..++ ++.+.+|.+|+++-.+ T Consensus 284 ~~~~~~r~~~r~-d~~v~~~~a~~~i~~~ 311 (318) T protein:vir:24 284 HNLVAVRVEAEY-AFHCNDAEAFVALTNV 311 (318) T ss_pred cCcEEEEEEEEE-ccEEecccceEEEEee Confidence 2445667777 4777999999998887 No 61 >protein:vir:98339 Length: 415 # NCBI annotation: putative capsid protein # Family: family:all:21 # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918931;genbank:gi:119443693;genbank:GeneID:4594501 Probab=98.40 E-value=9.1e-08 Score=59.17 Aligned_cols=319 Identities=6% Similarity=-0.024 Sum_probs=151.8 Q ss_pred CcccccchHH-----------------------------------hh-hccceeecCccccccccchhh--h--hhhhhh Q lcl|NC_020082. 1 MAIKTIDAQT-----------------------------------IQ-GNQWLVHKGYVSRNGDQWVIN--N--TALDAI 40 (354) Q Consensus 1 ~~~~~~~~~~-----------------------------------~~-~~~~~~~~~~~~~~~~~~~~~--~--~amda~ 40 (354) -.++.|+.+. .. ...+..+.+. . ........ . ..... T Consensus 42 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~- 118 (415) T protein:vir:98 42 QEITDLRSQIQEKQEELDKLKEKDGTSENNQQSVEVNEARTYRNQANINDLGISIQNT-K-VTSQEVRDFTEYLETRND- 118 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhhhHHHHHHHHHHhhhhhhh-h-hHHHHHHHHHHHHhhhhh- Confidence 0000000000 00 0000000000 0 00000000 0 00000 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee- Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA- 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~- 119 (354) .....+... ++.+++. +.+.+.+++........+.++.+.. .+.+...+.+......+.+.+++..++ +|..+ T Consensus 119 -~~~~~~~~~-~gg~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~E~~~-~~~~~~ 192 (415) T protein:vir:98 119 -IQGGSLKTD-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELAV 192 (415) T ss_pred -hhhcccccc-ccccccc--hHHHHHHHHHHHhhhhhhhheeeee-ccCCceeEEEEeecCCccceeeccccc-cCcccc Confidence 001111111 2334444 4667788887777777777766543 222333344444445556677766544 45433 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhC-ceeeeecCCccceeccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATK 198 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~ 198 (354) ...+.....++.++.-+.+|.+=++. ...++..--....++++++.+|+.+++|+.... ..++.+..........+ T Consensus 193 ~~~~~v~~~~~k~~~~~~iS~ell~d---s~~~l~~~i~~~l~~~~~~~~~~~il~g~g~g~~~~~~~~~~~~~~~~~~~ 269 (415) T protein:vir:98 193 KPFFQLAYDINTHRGYFRISREAIED---AKVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEGKKLEVK 269 (415) T ss_pred cceeeEEeeeeeeEeeehhhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCccccccccccccccccccc Confidence 45677888888888888887664443 345677778888999999999999999975432 22333222211111111 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee Q lcl|NC_020082. 199 DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 199 ~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~ 278 (354) ...-+++|.+++.++... ...+..++|+|+.|..|.+- -+..+. ||-..++ ..+.+-.|... T Consensus 270 ------~~~~~~~i~~~~~~~~~~---~~~~~~~v~n~~~~~~l~~l--kd~~G~----~l~~~~~---~~~~~~~l~G~ 331 (415) T protein:vir:98 270 ------KAKSLDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKM--KDKLGN----YLIQPDV---KEKTQQRLLGA 331 (415) T ss_pred ------cccchhHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHh--hccCCc----eeeccCc---CCCCCceecce Confidence 112267788888777542 34567899999999999653 233333 2211111 12222334333 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |......... +..|... ++|-+=.+.+.+..-..+++.............++.++ ++.+.+|.+++++++. T Consensus 332 pV~~~~~~~~---~~~~~~~-~~~Gd~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 402 (415) T protein:vir:98 332 KIEILPDEVL---GQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred eeEEeccccc---CCCCccE-EEEEehhccEEEEeecceEEEEeccccCceEEEEEEEe-ccEEeccccEEEEEEe Confidence 4333222111 1222222 22221112122222222333222122222334456676 4777889999999999 No 62 >protein:vir:79987 Length: 415 # NCBI annotation: head protein # Family: family:all:21 # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430002;genbank:gi:156604057;genbank:GeneID:5525447 Probab=98.40 E-value=9.1e-08 Score=59.17 Aligned_cols=319 Identities=6% Similarity=-0.024 Sum_probs=151.8 Q ss_pred CcccccchHH-----------------------------------hh-hccceeecCccccccccchhh--h--hhhhhh Q lcl|NC_020082. 1 MAIKTIDAQT-----------------------------------IQ-GNQWLVHKGYVSRNGDQWVIN--N--TALDAI 40 (354) Q Consensus 1 ~~~~~~~~~~-----------------------------------~~-~~~~~~~~~~~~~~~~~~~~~--~--~amda~ 40 (354) -.++.|+.+. .. ...+..+.+. . ........ . ..... T Consensus 42 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~- 118 (415) T protein:vir:79 42 QEITDLRSQIQEKQEELDKLKEKDGTSENNQQSVEVNEARTYRNQANINDLGISIQNT-K-VTSQEVRDFTEYLETRND- 118 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhhhHHHHHHHHHHhhhhhhh-h-hHHHHHHHHHHHHhhhhh- Confidence 0000000000 00 0000000000 0 00000000 0 00000 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee- Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA- 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~- 119 (354) .....+... ++.+++. +.+.+.+++........+.++.+.. .+.+...+.+......+.+.+++..++ +|..+ T Consensus 119 -~~~~~~~~~-~gg~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~E~~~-~~~~~~ 192 (415) T protein:vir:79 119 -IQGGSLKTD-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELAV 192 (415) T ss_pred -hhhcccccc-ccccccc--hHHHHHHHHHHHhhhhhhhheeeee-ccCCceeEEEEeecCCccceeeccccc-cCcccc Confidence 001111111 2334444 4667788887777777777766543 222333344444445556677766544 45433 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhC-ceeeeecCCccceeccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATK 198 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~ 198 (354) ...+.....++.++.-+.+|.+=++. ...++..--....++++++.+|+.+++|+.... ..++.+..........+ T Consensus 193 ~~~~~v~~~~~k~~~~~~iS~ell~d---s~~~l~~~i~~~l~~~~~~~~~~~il~g~g~g~~~~~~~~~~~~~~~~~~~ 269 (415) T protein:vir:79 193 KPFFQLAYDINTHRGYFRISREAIED---AKVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEGKKLEVK 269 (415) T ss_pred cceeeEEeeeeeeEeeehhhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCccccccccccccccccccc Confidence 45677888888888888887664443 345677778888999999999999999975432 22333222211111111 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee Q lcl|NC_020082. 199 DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 199 ~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~ 278 (354) ...-+++|.+++.++... ...+..++|+|+.|..|.+- -+..+. ||-..++ ..+.+-.|... T Consensus 270 ------~~~~~~~i~~~~~~~~~~---~~~~~~~v~n~~~~~~l~~l--kd~~G~----~l~~~~~---~~~~~~~l~G~ 331 (415) T protein:vir:79 270 ------KAKSLDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKM--KDKLGN----YLIQPDV---KEKTQQRLLGA 331 (415) T ss_pred ------cccchhHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHh--hccCCc----eeeccCc---CCCCCceecce Confidence 112267788888777542 34567899999999999653 233333 2211111 12222334333 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |......... +..|... ++|-+=.+.+.+..-..+++.............++.++ ++.+.+|.+++++++. T Consensus 332 pV~~~~~~~~---~~~~~~~-~~~Gd~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 402 (415) T protein:vir:79 332 KIEILPDEVL---GQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred eeEEeccccc---CCCCccE-EEEEehhccEEEEeecceEEEEeccccCceEEEEEEEe-ccEEeccccEEEEEEe Confidence 4333222111 1222222 22221112122222222333222122222334456676 4777889999999999 No 63 >protein:vir:81100 Length: 415 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429874;genbank:gi:156603927;genbank:GeneID:5525320 Probab=98.40 E-value=9.1e-08 Score=59.17 Aligned_cols=319 Identities=6% Similarity=-0.024 Sum_probs=151.8 Q ss_pred CcccccchHH-----------------------------------hh-hccceeecCccccccccchhh--h--hhhhhh Q lcl|NC_020082. 1 MAIKTIDAQT-----------------------------------IQ-GNQWLVHKGYVSRNGDQWVIN--N--TALDAI 40 (354) Q Consensus 1 ~~~~~~~~~~-----------------------------------~~-~~~~~~~~~~~~~~~~~~~~~--~--~amda~ 40 (354) -.++.|+.+. .. ...+..+.+. . ........ . ..... T Consensus 42 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~- 118 (415) T protein:vir:81 42 QEITDLRSQIQEKQEELDKLKEKDGTSENNQQSVEVNEARTYRNQANINDLGISIQNT-K-VTSQEVRDFTEYLETRND- 118 (415) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhhhHHHHHHHHHHhhhhhhh-h-hHHHHHHHHHHHHhhhhh- Confidence 0000000000 00 0000000000 0 00000000 0 00000 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee- Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA- 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~- 119 (354) .....+... ++.+++. +.+.+.+++........+.++.+.. .+.+...+.+......+.+.+++..++ +|..+ T Consensus 119 -~~~~~~~~~-~gg~~iP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~E~~~-~~~~~~ 192 (415) T protein:vir:81 119 -IQGGSLKTD-SGFVVIP--EEIVTDILKLKEVEFNLDKYVTVKR-VTNGSGKYPVVRQSEVAALEKVEELEE-NPELAV 192 (415) T ss_pred -hhhcccccc-ccccccc--hHHHHHHHHHHHhhhhhhhheeeee-ccCCceeEEEEeecCCccceeeccccc-cCcccc Confidence 001111111 2334444 4667788887777777777766543 222333344444445556677766544 45433 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhC-ceeeeecCCccceeccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATK 198 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~ 198 (354) ...+.....++.++.-+.+|.+=++. ...++..--....++++++.+|+.+++|+.... ..++.+..........+ T Consensus 193 ~~~~~v~~~~~k~~~~~~iS~ell~d---s~~~l~~~i~~~l~~~~~~~~~~~il~g~g~g~~~~~~~~~~~~~~~~~~~ 269 (415) T protein:vir:81 193 KPFFQLAYDINTHRGYFRISREAIED---AKVNVLQELKLWMARTIAATRNKAIIDVITKGSTGSTSSGFEKEGKKLEVK 269 (415) T ss_pred cceeeEEeeeeeeEeeehhhHHHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhccccCccccccccccccccccccc Confidence 45677888888888888887664443 345677778888999999999999999975432 22333222211111111 Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee Q lcl|NC_020082. 199 DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 199 ~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~ 278 (354) ...-+++|.+++.++... ...+..++|+|+.|..|.+- -+..+. ||-..++ ..+.+-.|... T Consensus 270 ------~~~~~~~i~~~~~~~~~~---~~~~~~~v~n~~~~~~l~~l--kd~~G~----~l~~~~~---~~~~~~~l~G~ 331 (415) T protein:vir:81 270 ------KAKSLDDIKDAINLNVKP---NYEHNVAIVSQTMFAKLDKM--KDKLGN----YLIQPDV---KEKTQQRLLGA 331 (415) T ss_pred ------cccchhHHHHHHHhhhhh---ccCCCEEEEcHHHHHHHHHh--hccCCc----eeeccCc---CCCCCceecce Confidence 112267788888777542 34567899999999999653 233333 2211111 12222334333 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) |......... +..|... ++|-+=.+.+.+..-..+++.............++.++ ++.+.+|.+++++++. T Consensus 332 pV~~~~~~~~---~~~~~~~-~~~Gd~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 402 (415) T protein:vir:81 332 KIEILPDEVL---GQKGNNT-LIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQ-DCRILDYKSAIVIEYD 402 (415) T ss_pred eeEEeccccc---CCCCccE-EEEEehhccEEEEeecceEEEEeccccCceEEEEEEEe-ccEEeccccEEEEEEe Confidence 4333222111 1222222 22221112122222222333222122222334456676 4777889999999999 No 64 >protein:vir:108211 Length: 318 # NCBI annotation: gp9 # Family: family:all:6420 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552338;genbank:gi:160700658;genbank:GeneID:5758931 Probab=98.39 E-value=2e-08 Score=62.83 Aligned_cols=280 Identities=10% Similarity=0.042 Sum_probs=159.6 Q ss_pred hcCCccccchhhhhHHHHHHH----HHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc---CceeEecCCC Q lcl|NC_020082. 40 IGNPNVMLDADGGIAFYISQL----AGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV---TMGKFIGANG 112 (354) Q Consensus 40 ~~~~~~~~dA~~~~~fl~~~L----~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~---G~a~~~~~~~ 112 (354) +..|...+.+.+++....++| +.|+.++.+.....+.+..||--.+ .....++.|....+. |.++.+..++ T Consensus 1 ~~~~~~i~s~~~~~~itv~~ll~~P~~I~~~i~e~~~~~~iad~lf~~~~--a~~~~~v~f~~~~p~~~~~d~e~VaEgg 78 (318) T protein:vir:10 1 MTAPTGIVSVSDGPAITVRELVGNPLWIPTALKKMMVNQFISESLFRNGG--ANPNGVVAYNEGNPSFLEDDVADVAEFG 78 (318) T ss_pred CCCCCcceeeecCCceehHHhhCCchhHHHHHHHHHhccchhhhhhhccc--ccccceeEEEecccccccCcHhhccCcc Confidence 233555555555556666666 6788888888888888888776322 223335556554433 5555565554 Q ss_pred CccceeeeccceeEE-EEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCc Q lcl|NC_020082. 113 QDLPRVAQSAQMHTV-PLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNV 191 (354) Q Consensus 113 ~dip~v~~~~~~~~~-pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~ 191 (354) + +|.++...+..+. ....++.+++++.+.+. +.+.+.-.+....+++++.++.|+.++ ..|.++++ T Consensus 79 E-iP~~~~~~G~~~ia~~~K~G~~~~vS~Em~~---~n~~~~v~r~~~~l~Nti~r~~d~~a~---------dal~sa~t 145 (318) T protein:vir:10 79 E-IPVSAGARGLPRTAFAVKKALGVRVSKEMID---ENRVGAVNDQMLQLRNTFIRANDRSAK---------ALLQSPIV 145 (318) T ss_pred c-ccccCCCCCchhhhhhehhccceeccHHHHh---hcChhHHHHHHHHHHHHHHHHHHHHHH---------HHHhcccc Confidence 4 7877766655544 55688999999876554 356677788888888888888877744 34666666 Q ss_pred cceeccccccccCHHHHHHHHHHHHHHHH-------------HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHH Q lcl|NC_020082. 192 TLSSATKDYKTMNGQELFNMLNAPIFSVI-------------NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQH 258 (354) Q Consensus 192 ~~~~~~~~w~~~T~~ei~~di~~~~~~l~-------------~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~ 258 (354) +...++..|... .....|+..+...+. ...+.-..|++|+|+|..+..|.+- ..+.++ T Consensus 146 ~~~~~s~~w~~~--~~~~~d~~~A~e~v~~a~~~~~~a~~~~~~~~~GY~pdtIVlhP~~~~~l~~n-------~~~~~~ 216 (318) T protein:vir:10 146 PTLAVPTAWDNG--GKVRTDIAIAIEQISTAAPTAYPAGVGSSDEYFGFIPDTIVMHYALLPILMDN-------ENFMKV 216 (318) T ss_pred ccccCCcCCCCc--ccccccchhhhhhhhhhhhhhhhhhhhhhhhccCccceeeEECHHHHHHHhcc-------hhhhhh Confidence 666667777642 111223333322111 1113446899999999999999642 122233 Q ss_pred HHhcC-c-eeecccc---cceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEe-eccchhcccccc-------- Q lcl|NC_020082. 259 FMEAN-S-YTLLTGN---ELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMA-NPIPFRMLAPQM-------- 324 (354) Q Consensus 259 l~~n~-~-~~~~~g~---~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~-vp~~~~~~~~~~-------- 324 (354) +.+|+ . +....+. +-.+-...++....+. .+...+.++ .++.+. -++|+++.+..+ T Consensus 217 y~~~a~~~~~~~~~tg~~~g~~lGl~vi~s~~~p--------~~~alvlq~--g~vG~~~d~~pl~~t~~~~egg~~~g~ 286 (318) T protein:vir:10 217 YERNANYVSTAPDWTGNFPGSVMGLNVIRSRTFP--------IDRVLIMER--GTVGFYSDTRPLQFTALYPEGNGPNGG 286 (318) T ss_pred hhccchhhhhcccccccccceeeceEEeecCccC--------CCeeEEEec--CCcceeeccccceeeecccCCCCCCCC Confidence 33322 1 1111100 1112223333332221 122333332 222222 345565554432 Q ss_pred cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 325 ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 325 ~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+..|...+...+ ..-|.+|+|++..-== T Consensus 287 ~~~s~~~~~~~~~-~~~V~~PkA~~~itgi 315 (318) T protein:vir:10 287 PTESYRADASHKR-ALAVDQPKAALWLTGI 315 (318) T ss_pred cchhhheehheee-eeeeeCcceeEEEeec Confidence 5678888887776 4899999999986533 No 65 >protein:vir:96762 Length: 632 # NCBI annotation: putative phage-related protein # Family: family:all:21 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039818;genbank:gi:126010917;genbank:GeneID:5076272 Probab=98.39 E-value=9.1e-08 Score=59.17 Aligned_cols=305 Identities=8% Similarity=-0.017 Sum_probs=153.3 Q ss_pred Ccccc------cc--------------------------------hHHhhhccceeecCccccccccchhhhhhhhhhcC Q lcl|NC_020082. 1 MAIKT------ID--------------------------------AQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN 42 (354) Q Consensus 1 ~~~~~------~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~ 42 (354) ..... ++ +..++..+|-...|. .+.+++.-. T Consensus 286 ~~~~~~~~~~~i~~~~re~~~~~l~rai~a~a~~~~~~a~~~~e~a~~~a~~~G~~arg~-----------~~~~~~l~~ 354 (632) T protein:vir:96 286 PGKPAIHSARDLGIQHKELQQYSLMRAINAAATGDWSKAGFEREVSLAIADASGKEARGF-----------YMPHEVLVQ 354 (632) T ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccchhhhhhhhHHHHHHHHhhhhhhhhh-----------hhhHHHHHH Confidence 00000 00 001111111111110 011111111 Q ss_pred CccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeecc Q lcl|NC_020082. 43 PNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSA 122 (354) Q Consensus 43 ~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~ 122 (354) .++...+.+.+.+|+.. +.+...+++.+++....+++-.-.-++..+ .+.+......+.+.|++..+ .+|..+... T Consensus 355 ra~~~~t~~~gg~lvp~-~~~~~~iie~lr~~s~i~~l~~~~~~~~~g--~~~ip~~~~~~~a~wv~E~~-~~~~s~~~f 430 (632) T protein:vir:96 355 RQLEKKTAGKGGELVAT-ELLSEEFIDILRNKAIIGQMGARMLPGLVG--DVDIPKKTSGANFYWIGEDE-DVQDSDFDF 430 (632) T ss_pred hhhhccccccccccccc-ccchHHHHHHHhhcchhhhhcceEeecCCc--ceEEEEEeCCceeEeecCCc-cccccccce Confidence 11112222223344432 223456777766665555541111112222 35556666666777777654 467777777 Q ss_pred ceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceecccccc Q lcl|NC_020082. 123 QMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDYK 201 (354) Q Consensus 123 ~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w~ 201 (354) +......+.++..+.+|.+=|+.+ ..+++.--......++++.+|+.+++|+.. ....|++|..+++..+.++. T Consensus 431 ~~i~l~~~k~~~~v~iS~ell~ds---~~~~~~~i~~~l~~a~~~~~d~a~l~G~G~~~~p~Gi~~~~~~~~~~~~~~-- 505 (632) T protein:vir:96 431 TTLSFSPKTIAGAVPVTRKLRKQS---SIHVENLIREDLIEGIGVALDLAMLTGTGLANDPVGLLNMTGVPALTYPAG-- 505 (632) T ss_pred eeEEeeeeEEEEehhhHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHhhcccCCCCccceeeecccccceecccc-- Confidence 788888888888888876555543 456777777888999999999999999863 45789999988765433221 Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 202 TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 202 ~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) ..+ +++|.++..++... +....+...+++|..+..|......+..+.-++ ..+. ..|.|..+ T Consensus 506 ~~~----~~~i~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l~~~~l~d~~G~~i~----~~~~---l~G~pv~~------ 567 (632) T protein:vir:96 506 GVD----WASVVDMETKISTF-NADAGRLAYLTSVTQRGAAKKAQVFDNTGERIW----QNNE---VNGYRAEA------ 567 (632) T ss_pred cCC----HHHHHHHHHHHhhc-ccccCccEEEEchhHHHHHHHHhccCCCCceee----cCCe---ecccceEe------ Confidence 112 45667777766543 222345578899988877765444444443222 2221 23333222 Q ss_pred eeccccccccccCc-ceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 282 DAAELAANGVSNSN-KPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 282 ~~~~~~~~g~g~~g-~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +........-.+. ++.+++ .. .-+.+. +.+- ....-...+.++.++ ++-+++|.+|++.-.+ T Consensus 568 -s~~ip~~~~~~gd~s~~~i~-~~--~~~~i~------~~~~~~~~~~~v~~~~~~~~-d~~v~~~~af~~~k~~ 631 (632) T protein:vir:96 568 -SNQIPADTWIFGDWSQIVIA-MW--GVLDLK------VDPYTKAASDGLVLRVFQDV-DAGVRRKEAFCIAKKG 631 (632) T ss_pred -ccccccCcEEEeecceEEEE-Ee--cceEEE------EccccccccCceEEEEEeec-Cceeechhhhhheeec Confidence 1111000000001 111111 11 112221 1111 111223455566665 5789999999999999 No 66 >protein:vir:4456 Length: 401 # NCBI annotation: Major capsid protein precursor # Family: family:all:21 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700379;genbank:gi:23505451;genbank:GeneID:955658 Probab=98.37 E-value=3.6e-08 Score=61.36 Aligned_cols=328 Identities=8% Similarity=0.051 Sum_probs=167.5 Q ss_pred CcccccchHHhhhc-cceeecCccc----cccccchhhh--hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhc Q lcl|NC_020082. 1 MAIKTIDAQTIQGN-QWLVHKGYVS----RNGDQWVINN--TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYG 73 (354) Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~--~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~ 73 (354) -+++.++++..+.+ .....+.-.. ..+..+.+.. ..+...-...+.+..++.+.+++. +.+.++|++.... T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~a~~~~lr~~~~~~~~~~e~~a~~~~~~~~GG~~iP--~~~~~~ii~~~~~ 133 (401) T protein:vir:44 56 NLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVP--EELDRSILSLLKD 133 (401) T ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCCCCceecc--HhHHHHHHHHHHh Confidence 22233333322211 1110110000 0000000000 000000001122222233345554 5677888887777 Q ss_pred cccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHHHHHHHHhCCC Q lcl|NC_020082. 74 DITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMP 152 (354) Q Consensus 74 ~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ 152 (354) ....+.+..+..- +. ....+.+......+.|++... ..|..+ ...+......+.++.-+.+|.+=|+.+ ..+ T Consensus 134 ~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~a~wv~E~~-~~~~~~~~~~~~v~~~~~k~~~~~~iS~ell~ds---~~~ 206 (401) T protein:vir:44 134 EVVMRQEATVITV-GG--SDYKKLVNLGGTASGWVGETD-TRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDA---FFN 206 (401) T ss_pred hhhhhhhceeeec-CC--CceEEEEecCCccceeecccc-ccCccccccceeeeeehhheeeehhhhHHHHhcc---hHH Confidence 7777776655432 21 233444444445566776543 345433 356667778888888788877655543 457 Q ss_pred cchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccc------cCHH-HHHHHHHHHHHHHHHHhCC Q lcl|NC_020082. 153 IDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKT------MNGQ-ELFNMLNAPIFSVINLSRR 225 (354) Q Consensus 153 ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~------~T~~-ei~~di~~~~~~l~~~s~g 225 (354) +...-....+.++++.+|+.+++|+......|+|+.+..........|.. .+.. --+++|.+++..|... T Consensus 207 l~~~i~~~la~ai~~~~~~~~l~G~G~~~p~Gil~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~d~i~~~~~~l~~~--- 283 (401) T protein:vir:44 207 VEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKA--- 283 (401) T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCCccceeeccccccccccccccccccccccccccccCHHHHHHHHHhcchh--- Confidence 88888889999999999999999998777899999987654333222211 1111 2267888888777532 Q ss_pred cccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcC Q lcl|NC_020082. 226 FHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKS 305 (354) Q Consensus 226 ~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d 305 (354) ....-.++|+++.|..|..- -+..|.-++. .+ ...|.+-+|...|.+........+ .+.+. |+|-+= T Consensus 284 ~~~~a~~v~n~~~~~~L~~l--kd~~G~~l~~----~~---~~~g~~~~l~G~PVv~~~~~p~~~---~~~~~-i~~Gd~ 350 (401) T protein:vir:44 284 HRTGAKFMMNNNSLFAIRLL--KDTEGNYLWR----PG---LELGQPSSLAGYGIAENEQMPDIA---ADAKA-IAFGNF 350 (401) T ss_pred hhcCCEEEEcHHHHHHHHHh--hccCCceeec----CC---cCCCCCceecceeeEEecCcCCcc---CCccE-EEEeeh Confidence 22334789999999999643 2434432211 00 112444455566665554332221 12222 333111 Q ss_pred cceEEEeeccchhccccc-ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 306 DRNLAMANPIPFRMLAPQ-MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 306 ~~~~~~~vp~~~~~~~~~-~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.+.+.--+.++.+--. ...-...+.++.|++ +.+..|.+++.+.++ T Consensus 351 ~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~r~d-~~~~~~~a~~~l~~~ 399 (401) T protein:vir:44 351 KRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTG-GMLVDSQAIKLLKIA 399 (401) T ss_pred hccEEEEEecceEEeeeccccCCcEEEEEEEEec-cEEecccceEEEEee Confidence 122222222223322111 111234556677876 556669999999999 No 67 >protein:vir:485 Length: 407 # NCBI annotation: putative major capsid protein # Family: family:all:21 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543092;swissprot:trembl:q8w627;genbank:gi:18249904;uniprot:Q8W627;genbank:GeneID:929693 Probab=98.35 E-value=1.3e-07 Score=58.43 Aligned_cols=322 Identities=8% Similarity=0.055 Sum_probs=164.5 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhc-----------CCccccchhhhhHHHHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIG-----------NPNVMLDADGGIAFYISQLAGIEATVYE 69 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~-----------~~~~~~dA~~~~~fl~~~L~~id~~v~e 69 (354) -+.+.++.+..+.+-.. .+.......+.. .. .+..+. ..++.+..+..+.+++. +.+.++|++ T Consensus 55 ~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~-~a-~~~~l~~g~~~~~~~~e~~a~~~~t~~~gG~~iP--~~~~~~I~~ 128 (407) T protein:vir:48 55 NLKSDLEAELAEVKRPA--GGTQNKVASEHK-EA-FIGFMRKGREDGLRELERKALQVGNDEDGGYAIP--EELDRTILT 128 (407) T ss_pred HHHHHHHHHHHHhhccc--cccccchhhHHH-HH-HHHHHhccchhhhhHHHHHhhhcccCCCCccccc--HhHHHHHHH Confidence 01111111111100000 111110000000 00 000000 00111111222334544 567888888 Q ss_pred hhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHHHHHHHH Q lcl|NC_020082. 70 TPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDEMRKSAA 148 (354) Q Consensus 70 ~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~El~~a~~ 148 (354) ........+.++.+.+- ......+.+......+.|++... ..|..+ ...+.....++.++.-+.+|.+=|+.+ T Consensus 129 ~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~a~~v~E~~-~~~~~~~~~f~~i~~~~~k~~~~~~iS~ell~ds-- 202 (407) T protein:vir:48 129 LLKDEVVMRQEATVITL---GGSDYKKLVNLGGTTSGWVGETD-ARPETATSKLGLIEPFMGEIYGNPQATQKMLDDA-- 202 (407) T ss_pred HHHhhhhhhhhceeeec---CCCceEEEEecCCcceeeecccc-cccccccccceeEEeeeeeeEeehhhHHHHHhcc-- Confidence 87777777776654332 22234555555556677776654 345433 356677888888888888877655543 Q ss_pred hCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccc------ccCHH-HHHHHHHHHHHHHHH Q lcl|NC_020082. 149 MNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYK------TMNGQ-ELFNMLNAPIFSVIN 221 (354) Q Consensus 149 ~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~------~~T~~-ei~~di~~~~~~l~~ 221 (354) ..++...-....++++...+|+.+++|+......|+++++..........|. +.++. --++||.+++..|.. T Consensus 203 -~~~l~~~i~~~l~~~i~~~~~~a~l~G~G~~~p~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~l~~~l~~ 281 (407) T protein:vir:48 203 -FFNVEDWINSELALEFAEQEEIAFTSGDGSKKPKGFLAYESTDEDDKTRAFGKLQHIASGAASGVTADAIIKLIYTLRK 281 (407) T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhhccCCCCccceeeecccccccccccccccccccccccccccChHHHHHHHHhhch Confidence 4578888888999999999999999999887889999998765433222221 11111 226778888877754 Q ss_pred HhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEE Q lcl|NC_020082. 222 LSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMV 301 (354) Q Consensus 222 ~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~ 301 (354) . +. ..-.+++++..|..|.+- -+..|.-++ ..+ ...|.+-.+...|.+........ + .|.+. |+ T Consensus 282 ~--~~-~~a~~v~n~~~~~~L~~l--kD~~Gr~l~----~~~---~~~g~~~~l~G~PV~~~~~~p~~--~-~~~~~-i~ 345 (407) T protein:vir:48 282 A--HR-SGAKFMMNNSSLFAIRLL--KDNDGNYLW----RPG---IELGQPSSLAGYGIVENEQMPDI--A-ADAKA-IA 345 (407) T ss_pred h--hh-cCCEEEEcHHHHHHHHHh--hccCCceee----ccC---cCCCCCceecceeeEEecCcCCc--c-CCccE-EE Confidence 2 22 223689999999998642 243333221 111 11233344555555544433221 2 22232 22 Q ss_pred E-EcCcceEEEeeccchhcccccc--cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 302 Y-DKSDRNLAMANPIPFRMLAPQM--ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 302 y-~~d~~~~~~~vp~~~~~~~~~~--~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) | +.+ +.+.+.--+.++..--.+ ++ ...+.++.|++ +.+..|.+|+.+.++ T Consensus 346 ~Gd~~-~~~~i~~~~~~~i~~d~~~~~~-~~~~~~~~r~d-~~v~~~~a~~~l~~~ 398 (407) T protein:vir:48 346 FGNFK-RGYTIVDRIGTRILRDPYTNKP-FVGFYTTKRTG-GMLVDSQAIKLMKIG 398 (407) T ss_pred EEecc-ccEEEEEeeceEEEeeccccCC-cEEEEEEEEec-cEEecccceEEEEee Confidence 2 211 112111112222221111 22 23455678876 567779999999999 No 68 >protein:vir:2344 Length: 397 # NCBI annotation: gp14 # Family: family:all:507 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075281;genbank:gi:12657868;genbank:GeneID:920118 Probab=98.33 E-value=1.9e-07 Score=57.42 Aligned_cols=288 Identities=9% Similarity=-0.009 Sum_probs=151.3 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |-.. .+ +.+|-. +.+.+ ++.++..++ -.++++.....-..++++.+.. .+. .+..+...... T Consensus 1 ~g~~-~e----~~~~~~------~~t~~-~~g~l~~~~---~~~ii~~l~~~s~i~~l~~~~~-~~~--~~~~ip~~~~~ 62 (397) T protein:vir:23 1 MGFS-AD----HSQIAQ------TKDTM-FTGYLDPVQ---AKDYFAEAEKTSIVQRVAQKIP-MGA--TGIVIPHWTGD 62 (397) T ss_pred CCcC-HH----HHHHhh------ccCCC-CccccchhH---HHHHHHHHHhccchhhhcceee-ccC--CceEEEEEcCC Confidence 1111 11 111111 11112 223444332 2455665666666666665543 222 24556666667 Q ss_pred CceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hC Q lcl|NC_020082. 103 TMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RG 181 (354) Q Consensus 103 G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~g 181 (354) +.+.|+++. ..+|..+...+......+.++..+.++.+=|+.+ ..++...-.+..++++++.+|+.+++|+.. .+ T Consensus 63 ~~a~wv~Eg-~~~~~s~~~f~~v~l~~~k~~~~v~iS~ell~ds---~~~l~~~i~~~l~~aia~~~d~a~l~G~gt~~~ 138 (397) T protein:vir:23 63 VSAQWIGEG-DMKPITKGNMTKRDVHPAKIATIFVASAETVRAN---PANYLGTMRTKVATAIAMAFDNAALHGTNAPSA 138 (397) T ss_pred cceEEecCC-ccccccccceeEEEEeeEEEEEeehhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc Confidence 778898764 5578888888888899999999988887655544 357888889999999999999999999854 35 Q ss_pred ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHh Q lcl|NC_020082. 182 MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFME 261 (354) Q Consensus 182 i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~ 261 (354) +.|+.+..+......+. -..+++.+++.++... ...+..++|+|..+..|.+.. +..+..++.--.. T Consensus 139 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~---~~~~a~~vmn~~~~~~L~~lk--d~~G~~i~~~~~~ 205 (397) T protein:vir:23 139 FQGYLDQSNKTQSISPN--------AYQGLGVSGLTKLVTD---GKKWTHTLLDDTVEPVLNGSV--DANGRPLFVESTY 205 (397) T ss_pred cccccccccceeeeccc--------chhHHHHHHHHhhhhc---ccCCCEEEEcHHHHHHHHHhh--ccCCceeeccccc Confidence 55665555433322221 1234555666665542 234578999999999997532 3333322210000 Q ss_pred cCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcC------cceEEEeeccchhccc-c----cccCc--- Q lcl|NC_020082. 262 ANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKS------DRNLAMANPIPFRMLA-P----QMASL--- 327 (354) Q Consensus 262 n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d------~~~~~~~vp~~~~~~~-~----~~~~~--- 327 (354) +.. ...+.+-++...|........ .|+...+.-+.. .+.+.+.+-......- . .+.++ T Consensus 206 ~~~--~~~~~~~tl~G~Pv~~s~~~~------~g~~~~~~gDfs~~~i~~~~~i~i~~~~e~~~~~~~~~~~~~~~lf~~ 277 (397) T protein:vir:23 206 ESL--TTPFREGRILGRPTILSDHVA------EGDVVGYAGDFSQIIWGQVGGLSFDVTDQATLNLGSQESPNFVSLWQH 277 (397) T ss_pred ccc--cccccCceeeeeeEEEeCCCC------CCceEEEEeecceEEEEEEeceEEEEeeeeeeeeccccccceeeeeec Confidence 000 000111234444443332211 121111111111 1112222211111100 0 01111 Q ss_pred -eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 328 -GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 328 -~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+.+..+++ +.+++|.++++++.. T Consensus 278 d~v~~ra~~r~d-~~v~~~~a~~~~~~~ 304 (397) T protein:vir:23 278 NLVAVRVEAEYG-LLINDVNAFVKLTFD 304 (397) T ss_pred cceeEEEEeeec-cceecccceEEEeec Confidence 13445566664 789999999999997 No 69 >protein:vir:5739 Length: 366 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892050;genbank:gi:33770513;interpro:IPR006444;uniprot:Q7Y410;genbank:GeneID:1732928 Probab=98.31 E-value=4.4e-07 Score=55.46 Aligned_cols=320 Identities=8% Similarity=0.004 Sum_probs=157.7 Q ss_pred CcccccchHH----hhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhcccc Q lcl|NC_020082. 1 MAIKTIDAQT----IQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDIT 76 (354) Q Consensus 1 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~ 76 (354) -..|-..+.. +++.-|-..... ............++ ++.+.+++++ +++. +.+..++++....... T Consensus 25 ~~~kg~~~~~~~~a~a~~~g~~~~a~-~~a~~~~~~~~~~~------a~~~~~~~Gg-~lvP--~~~~~~ii~~l~~~s~ 94 (366) T protein:vir:57 25 QQYKGAGMTRMVMSIAAGKGNLADAA-KFAATELGDTGLSM------AISTAAGSGG-ALIP--QNMQNEVIELLRDRTV 94 (366) T ss_pred ccccchhHHHHHHHHHhcccchhHHH-HHHHHhhcchhhhh------hccccccCCc-cccc--hhHHHHHHHHHhhhcc Confidence 0111111111 111111100000 00000000000111 2223333333 4444 3456778887666555 Q ss_pred chhh-ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcch Q lcl|NC_020082. 77 YRSD-VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDA 155 (354) Q Consensus 77 ~r~~-v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~ 155 (354) .+.+ ..+. +.. ...+.+.+....+.+.|++.. .++|..+...+....+.+.++.-..++.+=|+.+ ..+++. T Consensus 95 l~~lg~~~v-~~~--~g~~~~p~~t~~~~a~wv~E~-~~~~~s~~~f~~i~~~~~k~~~~~~iS~ell~ds---~~~~~~ 167 (366) T protein:vir:57 95 VRILGARSI-PLP--NGNLSMPRLSGGATAGYVGEG-KDVVATGATFDDVKLSAKTMIALVPVSNQLIGRA---GFNVEQ 167 (366) T ss_pred hhhhceeee-ecC--CCceEEEEEeCCcceeeeccC-ccccccccceeEEEEeeEEEEEeehhhHHHHhhh---hHHHHH Confidence 5554 2111 112 224566666666777888775 5578888888888999999998888886555444 346778 Q ss_pred HHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEe Q lcl|NC_020082. 156 EQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALM 234 (354) Q Consensus 156 ~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l 234 (354) --....++++.+.+|+.+++|+.. ..-.||+|..+.........=...+...+..++..+...... .+........+| T Consensus 168 ~i~~~l~~a~~~~~d~a~l~G~G~~~~p~Gi~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~vm 246 (366) T protein:vir:57 168 LLLGDILSAIATREDKAFLRDDGTGDTPKGMKAVATAANRLVAWTGTAINLTTIDEYLDSLILKHMD-SNSNMIRCGWGL 246 (366) T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCccccceeeccccccceeeccccccchhhHHHHHHHHHHhhhc-cccccccCEEEe Confidence 888899999999999999999863 467899998865432221111122233333333333222221 122234557899 Q ss_pred CHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeec Q lcl|NC_020082. 235 FPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANP 314 (354) Q Consensus 235 ~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp 314 (354) +|..+..|.+.+ +..|..++.-+ .+. ++...|...+...... .+..+...-++|- |.+.+-+..- T Consensus 247 n~~~~~~L~~lk--d~~G~~l~~~~---------~~g--~l~G~Pvv~s~~ip~~-~~~~~~~~~i~~g-dfs~~~i~~~ 311 (366) T protein:vir:57 247 SNRTYMTLFGLR--DGNGNKVYPEM---------SQG--ILKGYPIQRTSAIPAN-LGDDGNESEIYFC-DFNDVVIGED 311 (366) T ss_pred cHHHHHHHHhhh--ccCCceeccCC---------CCC--eecceeeEEccccccc-cccCCCccEEEEE-ecceEEEEEe Confidence 999999997543 44444333111 111 2333333333322111 1211111123332 2222222222 Q ss_pred cchhcccc-c---------ccCc----eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 315 IPFRMLAP-Q---------MASL----GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 315 ~~~~~~~~-~---------~~~~----~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..++.... + ..++ ...+.+..++ ++.+++|.+|+++-=+ T Consensus 312 ~~i~i~~~~ea~~~~~~g~~~~~f~~~~~~iR~~~~~-d~~v~~~~a~~~lt~~ 364 (366) T protein:vir:57 312 GMMKVDFSTEATYKDADGQLVSAFARNQSLIRVVTEH-DIGFRHPEGLVLGTGV 364 (366) T ss_pred cceEEEEeeccccccccccchhhhhcCceeEEeeeee-CcEeeccccEEEEecc Confidence 22221110 0 0111 2455667776 4778999999998877 No 70 >protein:vir:105038 Length: 428 # NCBI annotation: major capsid head protein precursor # Family: family:all:21 # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006586;genbank:gi:46402092;genbank:GeneID:2777903 Probab=98.23 E-value=8.1e-07 Score=53.98 Aligned_cols=327 Identities=9% Similarity=0.006 Sum_probs=153.5 Q ss_pred CcccccchHH----------h--hhcccee-------ecCccccc--------c-ccchhhhhhhhhhc----CCccccc Q lcl|NC_020082. 1 MAIKTIDAQT----------I--QGNQWLV-------HKGYVSRN--------G-DQWVINNTALDAIG----NPNVMLD 48 (354) Q Consensus 1 ~~~~~~~~~~----------~--~~~~~~~-------~~~~~~~~--------~-~~~~~~~~amda~~----~~~~~~d 48 (354) ..|+.+.++. - ......+ .++..... . .......++.+... .-.+.+. T Consensus 51 ~~i~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (428) T protein:vir:10 51 AKMDRMEATERAAALVAKPVKATQHGPAVIVKAEPKQYTGAGMTRMVMSIAAAQGNLQDAAKFASDELNDQSVSMAISTA 130 (428) T ss_pred HHHHHHHHHHHHHHHHhhhhhchhhccccccccccchhhhHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhhhHhhhhccc Confidence 1111000000 0 0000000 00000000 0 00000000000000 0011222 Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEE Q lcl|NC_020082. 49 ADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVP 128 (354) Q Consensus 49 A~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~p 128 (354) +..++ +++. +.+.++|++........+++..-.-+...+ .+.+......+.+.|++.. ..+|..+...+..... T Consensus 131 ~~~gg-~liP--~~~~~~ii~~l~~~~~l~~~~~~~~~~~~g--~~~~p~~~~~~~a~~v~Eg-~~~~~~~~~f~~i~~~ 204 (428) T protein:vir:10 131 AGSGG-VLIP--QNIHSEVIELLRDRTIVRKLGARSIPLPNG--NMSLPRLAGGATASYTGEN-QDAKVSEARFDDVKLT 204 (428) T ss_pred ccCCc-cccc--hhHHHHHHHHHhhhchhhhhcceeeecCCc--ceEEEEEeCCcceeeeccC-ccccccccceeeEEee Confidence 22233 4444 345667888776666666652211122222 2445555555677888765 4567777777888888 Q ss_pred EEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceeccccc-cccCHH Q lcl|NC_020082. 129 LGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDY-KTMNGQ 206 (354) Q Consensus 129 v~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w-~~~T~~ 206 (354) .+.++.-+.+|.+=|+.+ ..++..--....++++...+|+.+++|+.. ....||+|..........+.- ...+.+ T Consensus 205 ~~k~~~~v~is~ell~ds---~~~l~~~i~~~l~~ai~~~~d~~~l~G~G~~~~p~Gi~~~~~~~~~~~~~~~~~~~~~~ 281 (428) T protein:vir:10 205 AKTMIAMVPISNALIGRA---GFNVEQLVLQDILTAISVREDKAFMRDDGTGDTPIGMKARATQWNRLLPWAADAAVNLD 281 (428) T ss_pred eEEEEEeehhhHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccccccccccccccccccccccHH Confidence 899998888887766544 346777788899999999999999999864 356799987654322111111 112222 Q ss_pred HHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccc Q lcl|NC_020082. 207 ELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAEL 286 (354) Q Consensus 207 ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~ 286 (354) .+ +...+.+................+|+|..|..|.... +..|.-++. ... .| .|...|.+..... T Consensus 282 ~~-~~~~~~~~~~~~~~~~~~~~~~~v~n~~~~~~L~~lk--d~~G~~i~~---~~~-----~g---~l~G~pv~~~~~~ 347 (428) T protein:vir:10 282 TI-DTYLDSIILMSMDGNSNMISSGWGMSNRTYMKLFGLR--DGNGNKVYP---EMA-----QG---MLKGYPIQRTSAI 347 (428) T ss_pred HH-HHHHHHHHHhhhccccccccCEEEEcHHHHHHHHHhh--ccCCceecc---CCC-----CC---eeeceeeEEeccc Confidence 22 2222222222111112234567899999999986532 444433321 100 11 3444444443322 Q ss_pred cccccccCcceEEEEEEcCcceEEEeeccchhcccc-c--------------ccCceeEEeeeeeeeeEEEECcceeeee Q lcl|NC_020082. 287 AANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-Q--------------MASLGITVPAEYKISGTEFRYPLCAAYV 351 (354) Q Consensus 287 ~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~--------------~~~~~~~~~~~~~~gGv~i~~P~ai~y~ 351 (354) .. +.+.++....++|- |...+.+..-..++.... + .++ ...+.+..++ ++.+++|.||+++ T Consensus 348 p~-~~~~~~~~~~i~~g-d~s~~~i~~~~~i~i~~~~~~~~~~~~~~~~~~f~~~-~~~~R~~~r~-d~~v~~p~a~~~~ 423 (428) T protein:vir:10 348 PA-NLGEGGKESEIYFA-DFNDVVIGEDGNMKVDFSKEASYIDTDGKLVSAFSRN-QSLIRVVTEH-DIGFRHPEGLVLG 423 (428) T ss_pred cc-cccCCCccceEEEE-ecceEEEEEecceEEEeecccccccccccccchhhcc-hhheeeeeee-CceeeccceEEEE Confidence 11 12222222223332 222222322233322211 1 011 1344567776 5899999999997 Q ss_pred ecC Q lcl|NC_020082. 352 DMA 354 (354) Q Consensus 352 D~~ 354 (354) .=. T Consensus 424 t~~ 426 (428) T protein:vir:10 424 TGV 426 (428) T ss_pred ecc Confidence 655 No 71 >protein:vir:102119 Length: 404 # NCBI annotation: phage major capsid protein, HK97 family # Family: family:all:21 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699941;genbank:gi:110804052;genbank:GeneID:4206662 Probab=98.19 E-value=1.3e-07 Score=58.34 Aligned_cols=320 Identities=8% Similarity=0.030 Sum_probs=153.5 Q ss_pred CcccccchHH--------hhh-ccceeecCcccccc-------cc-----------------chhhhhhhhhhcCCcccc Q lcl|NC_020082. 1 MAIKTIDAQT--------IQG-NQWLVHKGYVSRNG-------DQ-----------------WVINNTALDAIGNPNVML 47 (354) Q Consensus 1 ~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~-------~~-----------------~~~~~~amda~~~~~~~~ 47 (354) --+..|+.+. ++. ......+....... .. .....-...+ +.. T Consensus 38 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a-----~~~ 112 (404) T protein:vir:10 38 NEIDILQAKIEAQKRKENIENNFNEDNVKSLNTGKEENVIYNGALFVRAIADNLLKQKNQRGLNLSEKEINA-----ISE 112 (404) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHhhhhcchhhHHhh-----hcc Confidence 0000000000 000 00000000000000 00 0000000111 111 Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccce--eeecccee Q lcl|NC_020082. 48 DADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPR--VAQSAQMH 125 (354) Q Consensus 48 dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~--v~~~~~~~ 125 (354) ..++.+.+++. +.+.+++++.....-..+.++++..- +...-.+.+........+.+++.... .|. .+...+.. T Consensus 113 ~~~~~gg~~vP--~~~~~~ii~~~~~~~~l~~l~~~~~~-~~~~g~~~~~~~~~~~~~~~v~e~~~-~~~~~~~~~f~~i 188 (404) T protein:vir:10 113 NIDEDGGYAVP--EDIQTKINTRLKDTTDLYNMVDYEPV-FTRSGSRTYEKRSKQKPMKPLSENQQ-IPTNGDNGKLERF 188 (404) T ss_pred ccCCCCceeec--hhHHHHHHHHHhhhhhHhhhhceeec-cCCccceEEEEecCCcceeecccccc-ccccccccceeee Confidence 11233334544 45677888877777777777665432 21222344444445556667766543 333 23445667 Q ss_pred EEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceeccccccccC Q lcl|NC_020082. 126 TVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDYKTMN 204 (354) Q Consensus 126 ~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w~~~T 204 (354) ......++.-+.+|.+=|+. ...++..--....+++++..+|+.+++|+.. ....|+++..+....+.++. .+ T Consensus 189 ~~~~~k~~~~~~iS~ell~d---s~~~l~~~i~~~la~~~~~~~~~~il~G~g~~~~~~gi~~~~~~~~~~~~~~---~~ 262 (404) T protein:vir:10 189 NFKLKDLADFMSIPNDLLKF---ADKSLEDWIINWFVDKVRITRNAEILYGAGGDEHATGIMTANKFKKITLPKS---PA 262 (404) T ss_pred EeeheeeEeeehhhHHHHhh---cHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceeeccccceeecccc---cc Confidence 77777888878887754433 3346777788889999999999999999864 45788988887665443321 12 Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeec Q lcl|NC_020082. 205 GQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAA 284 (354) Q Consensus 205 ~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~ 284 (354) ++++.++++.... .+....-.++|+|..|..|.+.. +..|.-++. .++ ..+.+-++...|..... T Consensus 263 ----~~~~~~~~~~~l~--~~~~~~~~~v~n~~~~~~L~~lk--d~~G~~l~~----~~~---~~~~~~~l~G~PV~~~~ 327 (404) T protein:vir:10 263 ----LKDFKKCKNVELL--NVFKATSSWIVNQDGFNYLDSLE--DKTGRPYLQ----PDP---KDPTQYRFLGLPVIELP 327 (404) T ss_pred ----HHHHHHHHHhhhh--ccccCCCEEEEcHHHHHHHHHhh--ccCCceeec----cCc---CCCCCccccceeeEEec Confidence 4566666553322 23444557899999999986532 333322211 000 11222233333332211 Q ss_pred cccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cc-c---CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 285 ELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QM-A---SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 285 ~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~-~---~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..... ++.+... ++|-+=.+.+.+..-..++.... ++ . .=...+.++.++ |+.+.+|.+++.+.++ T Consensus 328 ~~~~~--~~~~~~~-~~~gd~s~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~r~-d~~v~~~~a~~~~~~~ 398 (404) T protein:vir:10 328 NDLLL--STESAIP-VLLGDTKEAYKYVSDGAYELATTNIGAGAFETNTTKARIIMRI-DGNVKDSEALLIAEIP 398 (404) T ss_pred ccccC--CCCCccE-EEEEeccccEEEEEecceEEEEeccccchhhcCceEEEEEEee-ccEEecccceEEEEee Confidence 11111 1222222 33322122232222122222111 11 1 112345567776 4789999999999999 No 72 >protein:vir:4856 Length: 293 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049396;genbank:gi:9632424;genbank:GeneID:1258532 Probab=98.12 E-value=1.2e-06 Score=53.09 Aligned_cols=272 Identities=7% Similarity=-0.046 Sum_probs=144.2 Q ss_pred hhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCc Q lcl|NC_020082. 36 ALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQD 114 (354) Q Consensus 36 amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~d 114 (354) .+.+. +..++ .+++ ++.. +.+.++|++........+++..+.. .......+.+.... ..+.+.|++..+. T Consensus 1 ~l~~~---~~~t~-~~gg-~liP--~~~~~~Ii~~~~~~~~l~~~~~~~~-~~~~~g~~~~~~~~~~~~~a~~v~Eg~~- 71 (293) T protein:vir:48 1 MLDSK---TDHSG-SDAG-LTIP--QDIRTAINTLVRQYDSLQEYVNVEN-VTTLTGSRVYEKWTDITGLANIDDEAGK- 71 (293) T ss_pred Cceee---ccccc-CcCc-eEec--hhHHHHHHHHHHhhhhhhhhceeee-ccCCcceEEEEeecCCCcceeeecCCcc- Confidence 12221 11111 2233 3433 4567778888877777777765432 22222334444443 3466788877644 Q ss_pred ccee-eeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc Q lcl|NC_020082. 115 LPRV-AQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL 193 (354) Q Consensus 115 ip~v-~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~ 193 (354) +|-. ....+......+.++..+.+|.+=++.+ ..+|...-....+++++..+|+.++.|...... T Consensus 72 ~~~~~~~~~~~i~l~~~k~~~~~~iS~ell~ds---~~~l~~~i~~~la~~~~~~~~~~i~~g~~~~~~----------- 137 (293) T protein:vir:48 72 IADIDDPKLSLIKYTIKRYAGISTVTNSLLADS---AENILAWLSGWIAKKVVVTRNKAILGVVDKLPT----------- 137 (293) T ss_pred cccccccceeEEEEeeeEEEEeehhhHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhHHhhccccccc----------- Confidence 4533 3567788888899988888877666544 457888888889999999999999887543210 Q ss_pred eeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccc Q lcl|NC_020082. 194 SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNEL 273 (354) Q Consensus 194 ~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l 273 (354) . -...+ ++||.+++.++... + .....++|+|+.|..|.+-. +..+.-++ ..++ ..+.+- T Consensus 138 ---~--~~~~~----~d~i~~~~~~l~~~--~-~~~a~~vmn~~~~~~L~~lk--d~~g~~l~----~~~~---~~~~~~ 196 (293) T protein:vir:48 138 ---K--PTLTK----WDDIIDLEAKVDPA--I-KQTSFFLTNTSGFTALKKVK--NALGDYLM----ERDV---KSPTGY 196 (293) T ss_pred ---c--ccccC----HHHHHHHHHhhhhh--h-cCCCEEEEcHHHHHHHHHhh--ccCCceEe----ecCc---CCCCCc Confidence 0 01112 46777777777532 2 23457999999999996532 33332221 1111 122223 Q ss_pred eEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhc--ccc---cccCceeEEeeeeeeeeEEEECccee Q lcl|NC_020082. 274 DIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRM--LAP---QMASLGITVPAEYKISGTEFRYPLCA 348 (354) Q Consensus 274 ~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~--~~~---~~~~~~~~~~~~~~~gGv~i~~P~ai 348 (354) +|...|........... ...+... ++|-+=.+.+.+..-..++. ... ....=...+.+..|.+ +.+++|.++ T Consensus 197 ~l~G~Pv~~~~~~~~~~-~~~~~~~-~~~gd~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~ 273 (293) T protein:vir:48 197 SIAGFAVKEISDRWLPN-ASSGVMP-LYFGDLKQAVTLFDRQQMSLLSTNIGGGAFETDTTKVRVIDRFD-VVATDTEAF 273 (293) T ss_pred eecceeeEEecccccCC-ccCCceE-EEEEeccceEEEEEecceEEEEecccchhhhcCeEEEEEEEeeC-cEEecccce Confidence 34333332221111111 1122222 22221122222221122221 111 0111124556677776 567899999 Q ss_pred eeeecC Q lcl|NC_020082. 349 AYVDMA 354 (354) Q Consensus 349 ~y~D~~ 354 (354) +.+.++ T Consensus 274 ~~l~~~ 279 (293) T protein:vir:48 274 VPASFK 279 (293) T ss_pred EEEEee Confidence 999998 No 73 >protein:vir:93616 Length: 645 # NCBI annotation: putative major head protein/prohead protease # Family: family:all:21 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449293;genbank:gi:157166041;goa:Q6H9U8;interpro:IPR006433;uniprot:Q6H9U8;genbank:GeneID:5580438 Probab=98.09 E-value=5e-06 Score=49.66 Aligned_cols=318 Identities=9% Similarity=-0.083 Sum_probs=154.8 Q ss_pred CcccccchHHhh----hccceeecCc----cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhh Q lcl|NC_020082. 1 MAIKTIDAQTIQ----GNQWLVHKGY----VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPY 72 (354) Q Consensus 1 ~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~ 72 (354) -..|-.++-... ...|-. ..+ ....+...... ....++....+++++.+++.++.. +.+...+++..+ T Consensus 288 ~~~kg~~f~~~~~al~~~~g~~-~~a~e~a~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~Gg~~vp--~~~~~~ii~~l~ 363 (645) T protein:vir:93 288 KLDKGIGFARFAKSLAAAKGVR-SEALEVARRQYPDDSRLH-HVLKSAVGAGTTTDPQWAGSLSEY--QEYAQDFIDYLR 363 (645) T ss_pred hhhhhhhHHHHHHHHHhcccch-hHHHHHHHhhcccchhhh-hhhhhhhhccccccccccCCccCc--hhhHHHHHHhhh Confidence 000111111100 000000 000 00000001111 112222234556666666777765 445567888777 Q ss_pred ccccchhhccccCCCCCce-eeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCC Q lcl|NC_020082. 73 GDITYRSDVPMAANIPEYA-DTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNM 151 (354) Q Consensus 73 ~~l~~r~~v~v~~~~~~~~-~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~ 151 (354) +....+++-....+.-... -.+.......-+.+.|++.. ..+|..+..++......+.++.-..+|.+=|+.+ .. T Consensus 364 ~~svv~~l~~~~~~~~~~~~~~~~ip~~t~~~~a~wv~Eg-~~~~~s~~~f~~v~l~~~kla~~~~iS~ell~ds---~~ 439 (645) T protein:vir:93 364 PQTIIGRFGQGGIPALRQVPFNIRVHAQVSGGAAGWVGEG-KTKPLTKFDFESITFSHAKVSAIAVLTEELIRFS---SP 439 (645) T ss_pred hhhhHHhhccccccccccccCceeeeeeecCcceEEeccC-ccccccccceeEEEEeeEEEEEeehhHHHHHhhc---hH Confidence 7766666543321111110 11233344444667888764 5578888888888888888888777776545544 45 Q ss_pred CcchHHHHHHHHHHHHHhhheeeeeehhhC----ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc Q lcl|NC_020082. 152 PIDAEQARLAFRGAEEHSQSVAYFGDSSRG----MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH 227 (354) Q Consensus 152 ~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g----i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~ 227 (354) +++.--....++++++.+|+.+|+|+...+ -.|++|.- +... +......|+..++..+... +.. T Consensus 440 ~~~~~i~~~l~~aia~~~d~a~l~g~g~~~~~~~p~gi~~~~--~~~~--------~~~~~~~d~~~~~~~~~~a--~~~ 507 (645) T protein:vir:93 440 AADALVRNALAEAVVARLDTDFVDPKKAAVADVSPASITHDV--KGTA--------SSGNPDADAEAAFGQFVAA--NLQ 507 (645) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCccccceeccc--cccc--------cccchHHHHHHHHHHHHhc--CCC Confidence 677777888999999999999999875421 24454421 1111 1112346788888777653 333 Q ss_pred cc-cEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCc Q lcl|NC_020082. 228 VP-NTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSD 306 (354) Q Consensus 228 ~p-~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~ 306 (354) .+ -..+|+|..+..|.+.+ +..+.-++ - +. ...+ -++...|.+.+......-....-++..++-. T Consensus 508 ~~~a~~vmn~~~~~~L~~lk--d~~G~~~~----~-~~--~~~~--~tL~G~PV~~s~~vp~~~~~gd~s~~~ig~~--- 573 (645) T protein:vir:93 508 PTGAVWLMSSTNALALSMRK--NALGQKEY----P-DM--TLLG--GSFQGLPVIVSQYVGDQLVLVNAPDIYLADD--- 573 (645) T ss_pred ccccEEEEcHHHHHHHHhcc--ccCCceee----c-CC--CCCC--ceeeceeeEEeccCCcceeEeccccEEEEEe--- Confidence 33 35789999999997643 22222111 0 00 0111 1344444444332211100011122222211 Q ss_pred ceEEEeeccchhcc------------------cccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 307 RNLAMANPIPFRML------------------APQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 307 ~~~~~~vp~~~~~~------------------~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+.+.+...-+.. -.-.++ -.-+.++.+++ ..+++|.||+++.=+ T Consensus 574 ~~v~i~~s~~a~~~~~~~~~~~~~~~~~~~~v~lf~~d-~vaira~~r~d-~~~~~p~a~~~lt~~ 637 (645) T protein:vir:93 574 GGVAVDMSREASLEMQSEPTGDSTTPSPVELVSMFQTG-SVAIRAERWIN-WRRRRTAAVAVITGV 637 (645) T ss_pred cceEEEeecceeEEEeecccccccccccccchhHhhcC-ceEEEEEEEEc-ceeeCccceEEEecc Confidence 11222211111100 000112 24456777775 777999999998866 No 74 >protein:vir:1328 Length: 392 # NCBI annotation: gp36 # Family: family:all:21 # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047927;swissprot:trembl:q9zwv6;genbank:gi:9631145;uniprot:Q9ZWV6;genbank:GeneID:2715889 Probab=98.04 E-value=3.2e-06 Score=50.74 Aligned_cols=315 Identities=8% Similarity=-0.012 Sum_probs=155.3 Q ss_pred CcccccchHHh----------------hhccceee--cCcccccc---------ccchhhhhhhhhhcCCccccchhhhh Q lcl|NC_020082. 1 MAIKTIDAQTI----------------QGNQWLVH--KGYVSRNG---------DQWVINNTALDAIGNPNVMLDADGGI 53 (354) Q Consensus 1 ~~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~---------~~~~~~~~amda~~~~~~~~dA~~~~ 53 (354) ..++.||.+.- ++.-+..- +....... .+.-....+... .. .+.+ +++ T Consensus 45 ~e~~~l~~~i~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~~~---~~-~t~~-~~g 119 (392) T protein:vir:13 45 TAVADFDGRIKRGIDAIKATDAVTSLLSGLQGSGSGAQRSADHDDDAVLRAGNLGEARSFEFAPEK---RD-GTKA-GNP 119 (392) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccchhhhhhHHHHHHHhccchhhhHHHHhhhhh---hc-cccc-CCC Confidence 12222221110 00000000 00000000 000000001111 00 1111 122 Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEE Q lcl|NC_020082. 54 AFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAG 133 (354) Q Consensus 54 ~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~ 133 (354) .++.. +.+...+.+........+.+..+.... ....+.+......+.+.|++..+ .+|..+...+......+.++ T Consensus 120 ~~~~~--~~~~~~i~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~a~~v~E~~-~~~~~~~~f~~v~~~~~k~~ 194 (392) T protein:vir:13 120 NVLSR--TLYGQLIAQAVERSAIMRGGASTFTTS--DANPMDFTVITGRATAGIVGETA-EIPESYPATTQRSMGGFKYG 194 (392) T ss_pred ccccc--cchHHHHHHHHhhhhhhhhcceeeecC--CCceeEEEEEcCCcceeeecccc-cccccccceeeEEeeeeeEE Confidence 23332 122333333333332333333332211 12234556666777788887664 47877888888888899998 Q ss_pred eeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHH Q lcl|NC_020082. 134 NECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLN 213 (354) Q Consensus 134 ~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~ 213 (354) .-..+|.+=|+.+ ..++..--....+.++++.+|..+++|+....-.|+++++..... ...|.+.+ .-.+++|. T Consensus 195 ~~~~iS~ell~ds---~~~l~~~i~~~l~~~i~~~~d~~~l~G~Gt~~p~Gil~~~~~~~~--~~~~~~~~-~~~~d~l~ 268 (392) T protein:vir:13 195 FASVVSYEFATDQ---VLDLVGFLVSDAGPAIGDAMGRHFLTGTGTGQPRGILTDATGANA--AFGEADAD-SKVSDALI 268 (392) T ss_pred eeehhHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccccccccccccc--cccccccc-cccHHHHH Confidence 8888877666543 446777788889999999999999999877677899988764322 22222211 12256777 Q ss_pred HHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccccc Q lcl|NC_020082. 214 APIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN 293 (354) Q Consensus 214 ~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~ 293 (354) +++..|... .-.+-..+|+|..+..|..- -+..|.-++ ..++ ..+.+-++...|.+....... T Consensus 269 ~~~~~l~~~---~~~~a~~v~n~~~~~~l~~l--kd~~G~~l~----~~~~---~~g~~~~l~G~Pv~~~~~~~~----- 331 (392) T protein:vir:13 269 DLFHEVPSA---YRKNAKFVVNDLRAAQMRKL--KDANGQYLW----QSAL---TVGAPDTFNGKVVETDDGMPA----- 331 (392) T ss_pred HHHHhhhhh---hhcCCEEEEcHHHHHHHHHh--hccCCceee----cCCc---CCCCCceecceeeEEcCCCCC----- Confidence 777766432 22345789999999998653 243443221 1111 123333444455544432211 Q ss_pred CcceEEEEEEcCcceEEEeeccchhcccc-cc--cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 294 SNKPRYMVYDKSDRNLAMANPIPFRMLAP-QM--ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 294 ~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~--~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +. |+|- |...+.+..-..++.... ++ ..-...+.++.|++ +.+.+|.+|+.+.++ T Consensus 332 ---~~-i~~G-df~~~~i~~~~~~~i~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~A~~~~~~~ 389 (392) T protein:vir:13 332 ---DK-VLFA-DLSKYRVRFAGSLRVDRSVDAKFSTDQIVYRFLQRAD-GLLVDARGAKVLTVT 389 (392) T ss_pred ---Cc-EEEe-eccceeEEeecceEEEeeccccccCCcEEEEEEEEec-cEEecccceEEEEee Confidence 11 2221 112222222233333211 11 11134566778876 568999999999999 No 75 >protein:vir:101607 Length: 379 # NCBI annotation: major capsid protein precursor # Family: family:all:585 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112497;genbank:gi:53793597;uniprot:Q5ZGF6;genbank:GeneID:3101715 Probab=98.04 E-value=4.4e-06 Score=49.94 Aligned_cols=306 Identities=13% Similarity=0.001 Sum_probs=149.7 Q ss_pred Ccccc----cchH--HhhhccceeecCc--ccccc-----ccchhhh--hhhhhhcCCccccchhhhhHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKT----IDAQ--TIQGNQWLVHKGY--VSRNG-----DQWVINN--TALDAIGNPNVMLDADGGIAFYISQLAGIEA 65 (354) Q Consensus 1 ~~~~~----~~~~--~~~~~~~~~~~~~--~~~~~-----~~~~~~~--~amda~~~~~~~~dA~~~~~fl~~~L~~id~ 65 (354) ..+.. ++.. ..++..+-..... ..... ....+.. ..+.+ ...+++..+.++... +.+.. T Consensus 52 ~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ip----~~~~~ 125 (379) T protein:vir:10 52 SDMAALQAHADKLDVKLKEKAKSEDKSDSLVKSITENFNDIKEVRNGKSIQVKA--VGDMTLPVNLTGAQP----KDYNF 125 (379) T ss_pred HHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHhHHHHHhhhhhhhhh--hcccccCCCCccccc----hhhhh Confidence 01111 1110 1111111000000 00000 0000000 11222 122233333333222 44566 Q ss_pred HHHHhhhccccchhhccccCCCCCceeeEEEeeecccC--ceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHH Q lcl|NC_020082. 66 TVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVT--MGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEM 143 (354) Q Consensus 66 ~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G--~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El 143 (354) .+++........+.++.+.+- ...++.|......+ .+.+++. +...|..+...+.....++.++.-+.+|.+=| T Consensus 126 ~ii~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~E-g~~~~~~~~~f~~i~~~~~k~~~~~~iS~ell 201 (379) T protein:vir:10 126 DVVLNPSQMLNVSDIVGAVSI---SGGTYTFVRENGAGEGAIGAQVE-GATKGQKDYDISMIDVNTDFIAGFTRYSKKMA 201 (379) T ss_pred HHHHhHHhhhhHHhhceeeec---cCCceEEEEeecCCCcccccccC-CccccccccceeeeEeeeeeEEeeehhhHHHH Confidence 777777777777777665433 22345555444333 3344554 35578888888888999999999888887655 Q ss_pred HHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 144 RKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 144 ~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) +.+. .+..--....+++++..+|..++.|....+..+.+. .+.. .-+++|.+++..+.. T Consensus 202 ~D~~----~l~~~i~~~la~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~------~~~d~i~~~~~~~~~-- 260 (379) T protein:vir:10 202 NNLP----FLTSFIPNALRRDYAKAENAAFNAVLAANATASTEI---------ITNK------NKVEMLINEIAKQEN-- 260 (379) T ss_pred hhHH----HHHHHHHHHHHHHHHHHHHHHHhccccccccccccc---------ccCc------ccHHHHHHHHHhhhh-- Confidence 5442 366666677788889999988877765443333211 1111 114677777777653 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) ....+..++|+|..|..|.+.. +..|.-++ .-+ .....+.+..+...|.+.+.... .|+ .++-+ T Consensus 261 -~~~~~~~~vmn~~~~~~l~~lk--d~~G~~l~----~~~-~~~~~~~~~~l~G~pvv~s~~~~------ag~--~~~gd 324 (379) T protein:vir:10 261 -LDFPVTAIVLRPTDYYDILVTQ--KSVGAGYG----LPG-VVTQDNGVLRINGIPLFRATWLA------ANK--YYVGD 324 (379) T ss_pred -ccCCCCEEEEcHHHHHHHHHhh--ccCCceec----cCC-ccCCCCCcceecceeeEecCCCC------CCc--eEEee Confidence 2346678999999999986533 33332221 111 11122333355555665554322 111 11111 Q ss_pred cCcceEEEe--eccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMA--NPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~--vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...-.+.+. +...+...+. ....-...+.++.|++ +.+++|.+|++++++ T Consensus 325 f~~~~~~~~~~~~i~~~~~~~~~f~~~~~~~r~~~R~~-~~v~~p~a~v~~~~~ 377 (379) T protein:vir:10 325 WTRVTKVTTEGLSLEFSEVEGTNFVKNNITARIEAQVA-LAVEQPAALIFGDFT 377 (379) T ss_pred cccEEEEEEeceEEEEeecccccccCCcEEEEEEEEec-cEEecCccEEEEEec Confidence 111001110 1111111111 0111134566778884 788899999999999 No 76 >protein:vir:6212 Length: 434 # NCBI annotation: prohead protease # Family: family:all:21 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852592;genbank:gi:31415852;genbank:GeneID:1489210 Probab=98.03 E-value=6.4e-07 Score=54.54 Aligned_cols=322 Identities=9% Similarity=-0.000 Sum_probs=161.6 Q ss_pred Cccccc-chHHh----hh-------ccceeecCccccccccch---hhhhhh--hhhcCCccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTI-DAQTI----QG-------NQWLVHKGYVSRNGDQWV---INNTAL--DAIGNPNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~-~~~~~----~~-------~~~~~~~~~~~~~~~~~~---~~~~am--da~~~~~~~~dA~~~~~fl~~~L~~i 63 (354) ...+.. ..+.+ ++ ..+...++.......+.- ...+.- +.....++.+.. +.+.|++. +.+ T Consensus 82 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~e~r~a~~~~l~~~~~~~e~~a~~~~t-~~GG~lvP--~~~ 158 (434) T protein:vir:62 82 PTAKENPNEKTELSEEQRSAISASIAAALSTKGHRTNKETEIRSVFANYIVGNIDEKEARALGLVT-GNGSVTIP--DFL 158 (434) T ss_pred hhhhcchhhhHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHhccccchhhhhhhcccc-cccceecc--hhh Confidence 000000 00000 00 000000110000000000 000000 000001111111 23446665 457 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEe--cCCCCccceeeeccceeEEEEEEEEeeeeecHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFI--GANGQDLPRVAQSAQMHTVPLGYAGNECHYTLD 141 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~--~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~ 141 (354) .+.|++........+.+..+....+ ...+.+....+.+.+. ...+.++|..+..++......+.++.-+.+|.+ T Consensus 159 ~~~Ii~~l~~~~~i~~~~~~~~~~~----~~~~p~~~~~~~a~~~~~~~e~~~~~~~~~~f~~v~~~~~k~~~~~~iS~e 234 (434) T protein:vir:62 159 SKEIITYAQEENFLRRLGTGVKTKE----NIKYPVLVKKAEAQGHKNERTNNEMPETDIEFDEIELSPTEFDALATVTKK 234 (434) T ss_pred HHHHHHhhhhhhhhhhhcceeccCC----ceEEEEEecCCcccceecccccccccccccceeeEEeeheeeEeehhhHHH Confidence 7888887777777777665533221 2445555444555444 233456777777788888899999888888776 Q ss_pred HHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhC-ceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 142 EMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRG-MYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 142 El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g-i~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) =|+.+ ..++..--....+.++...+|+.+++|+...+ ..|+++.++++..+.. ...+++|.+++.++. T Consensus 235 ll~ds---~~~l~~~i~~~la~~~~~~~d~~~l~G~G~~~~~~g~~~~~~~~~~~~~--------~~~~d~l~~l~~~l~ 303 (434) T protein:vir:62 235 LLART---GLPIEQIVMDELKKAYVRKETQYMVNGDEANNINDGALAKKAVEFKTDE--------KNLYDALVKMKNTPV 303 (434) T ss_pred HHhcc---hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccceeecccccccccc--------cchhhHHHHHHhhcc Confidence 55544 45788888889999999999999999987554 5577877776543222 123677777877775 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. + ...-..+|+|..|..|.+- -+..|.-+++ - ......|.+-+|...|...+..... +.+|....| T Consensus 304 ~~--~-~~~a~~v~n~~~~~~L~~l--kd~~G~~l~~----~-~~~~~~g~~~tl~G~pV~~~~~~~~---~~~~~~~~i 370 (434) T protein:vir:62 304 KE--V-RKKARWVLNTAALTKIETM--KTDDGFPLLR----P-FNQAEGGIGYTLLGFPVEEEDAIDI---PDSPDTPVF 370 (434) T ss_pred hh--h-hcCCEEEEcHHHHHHHHHh--hccCCCEeec----c-CCCccCCCCceecceeeEEecCccC---ccCCCceEE Confidence 42 2 1223679999999998643 2333322211 0 0011234444565566555543322 222333334 Q ss_pred EE-EcCcceE-EEee-ccchhcccccc-cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VY-DKSDRNL-AMAN-PIPFRMLAPQM-ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y-~~d~~~~-~~~v-p~~~~~~~~~~-~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +| +.+ +.+ .... ++.+++...-. ..-..-+.+..|..|-.|+.|++++-.=.- T Consensus 371 ~~Gdfs-~~~i~~~~g~~~i~~~~~~~~~~~~v~~~~~~r~Dgk~i~~~~~~~~~~~~ 427 (434) T protein:vir:62 371 YFGDFS-KFYIQDVIGSLEVQKLVELFSRTNRVGFRIWNLLDAQLIHSPFEVPVYKYV 427 (434) T ss_pred EEeecc-ceEEEEeeceeEEEeehhhhcccCceEEEEEeeecceeecCcccceEEEEE Confidence 33 222 222 1111 12222221111 222344677888888888889887754222 No 77 >protein:vir:9643 Length: 377 # NCBI annotation: major coat protein # Family: family:all:635 # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795405;genbank:gi:28876178;genbank:GeneID:1257724 Probab=98.01 E-value=3.5e-06 Score=50.48 Aligned_cols=311 Identities=6% Similarity=-0.031 Sum_probs=150.2 Q ss_pred Ccccccch----H-Hhh-hccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhcc Q lcl|NC_020082. 1 MAIKTIDA----Q-TIQ-GNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGD 74 (354) Q Consensus 1 ~~~~~~~~----~-~~~-~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~ 74 (354) --++.+.. + ..+ ++.+.-.++ .+....+... +.+++. ...+++++.++.. +.+..+|++..... T Consensus 37 ~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~lt~ee~~---~~~~~~----~~~~~~~gg~lvP--~~~~~~I~~~l~~~ 106 (377) T protein:vir:96 37 AAFTTMGDEILAKNEEEMERMFDLRDK-NRELTAEEIK---FFNDID----KNVGGKDKFKLLP--EETMVQVFDDLVAE 106 (377) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC-CcccCHHHHH---HHHHHH----hcCCCCCCceecC--HHHHHHHHHHHHhh Confidence 00011111 1 111 122211111 1111111111 222211 1112334445555 34566677655544 Q ss_pred ccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcc Q lcl|NC_020082. 75 ITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPID 154 (354) Q Consensus 75 l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld 154 (354) =..|.++.+.+-.+ . ......+..+.+.|++..+.--+..+...+....+.+.+..-..++.+=|+.+ ..+++ T Consensus 107 s~i~~~~~v~~~~~--~--~~i~~~~~~~~a~wv~e~~~~~~~~~~~f~~i~l~~~kl~~~~~is~~ll~ds---~~~le 179 (377) T protein:vir:96 107 HPLLKVINFKNTSL--R--LKALTAETSGTAVWGDIFGEIKGQLKQAFKEQDFSQFKLTAFVVIPKDALKFG---PKWLK 179 (377) T ss_pred hhhhhhceeEecCC--c--eEEEEecCCcceeEeecccccccccCccceeEeeeeeeEEeechhhHHHhhcc---hhhHH Confidence 44444444432211 1 22334456677888765433123345667788888899888778776655443 55788 Q ss_pred hHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc---------------ccccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 155 AEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD---------------YKTMNGQELFNMLNAPIFSV 219 (354) Q Consensus 155 ~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~---------------w~~~T~~ei~~di~~~~~~l 219 (354) .--....+++++..+++.+++|+....-.||++++.......... ....+++.+++.+..+...+ T Consensus 180 ~~i~~~l~~~~~~~~~~a~i~G~G~~~P~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 259 (377) T protein:vir:96 180 QFITEQLKEAIAVALELAIVKGNGLLQPVGLLKDLSQPTVDQSTGRDITTYKTDKEAIADLSDLDPDTAVELLVPVMKHL 259 (377) T ss_pred HHHHHHHHHHHHHHHhhceEeccCCCcceeeeeccccccccccccccccceeeccccccccccCChhHHHHHHHHHHHhh Confidence 889999999999999999999998888899999886543222111 12234555555555554444 Q ss_pred HHHhCC----cccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCc Q lcl|NC_020082. 220 INLSRR----FHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSN 295 (354) Q Consensus 220 ~~~s~g----~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g 295 (354) .....+ ..+.-.++|+|..+..+...+... -.++.+...-+.|+.+.. +... ..| T Consensus 260 ~~~~~~~~~~~~~~a~~~mn~~t~~~~~~~~~~~----------~~~G~~~~~l~~p~~v~~-----s~~~------p~~ 318 (377) T protein:vir:96 260 SVNDKKHPLKIAGQVKLLLNPEDRWTLEAKFTSR----------NQFGEYVTVLPHGITILE-----SLAV------ETG 318 (377) T ss_pred ccccccccccccCceEEEEchhhHHhcccccccc----------CCCCCceeccCCCceEEe-----cCCC------Ccc Confidence 322111 122346889998876653222111 011111111222332221 1110 011 Q ss_pred ceEEEEEEcCcceEEEeeccchhcccc-cccCc--eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 296 KPRYMVYDKSDRNLAMANPIPFRMLAP-QMASL--GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 296 ~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~--~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) + ++..+.+. +.+..-..++.-.- +.... ...+....|.+ -.++.|.+++.+|++ T Consensus 319 ~--i~fgdf~~--Y~i~~r~~~~i~~~~~~~~~~d~~~f~~~~r~d-G~~~d~~a~~vl~l~ 375 (377) T protein:vir:96 319 K--AIAFVANR--YDAFMATASTIEEYDQTFAMEDLQLYLTKNYFY-GKAKDNHTAALLTLA 375 (377) T ss_pred c--EEEEEcCc--EEEEEecccEEEeehhhhhhcCCeEEEEEEEEc-CEEecCCcEEEEEEe Confidence 1 11112111 22222222222111 22222 23455567765 467899999999999 No 78 >protein:vir:4197 Length: 314 # NCBI annotation: putative structural protein # Family: family:all:1377 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071822;genbank:gi:11863105;genbank:GeneID:1257607 Probab=98.00 E-value=5.6e-06 Score=49.37 Aligned_cols=297 Identities=12% Similarity=0.041 Sum_probs=153.2 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-c Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-G 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~ 101 (354) |+....... . ...+++ .+.++..|..+- .+ ++++.....-..|++..+....++....+..-... . T Consensus 1 ~~~~~~~~~-------~--~k~it~-~d~~gG~L~P~~--~~-~~i~~l~e~s~i~~~a~vi~t~~s~~~~i~~i~~g~~ 67 (314) T protein:vir:41 1 MDFLNKPFQ-------I--TPKIDV-PDLGKGILAVQR--FG-EFVREVRENSAIIKDARVLNALKSYEVDISRISLGVE 67 (314) T ss_pred CchhhhHHH-------h--hccccc-ccCCCceeChHH--HH-HHHHHHHhccchhhheeeecccCccceeecccccCcc Confidence 333222222 1 223322 233444566532 23 46666666666666666544333332222111110 0 Q ss_pred cCc-eeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh- Q lcl|NC_020082. 102 VTM-GKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS- 179 (354) Q Consensus 102 ~G~-a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~- 179 (354) ... ..+.+ .....|..+...+......+.+...+.++.+-|+... .|.++...-....++.+...+..+.|+|+.. T Consensus 68 ~~~~~~~~~-~~~~~~~~~~tf~~~~l~~~kl~~~v~is~e~L~D~a-~~~~le~~i~~~~Ae~~g~~~~~~~~nGdg~~ 145 (314) T protein:vir:41 68 LEPGRNTSG-TKVAPTADEVTVSTNTLEMKELVTKVVLEDEALEDNI-EQSAFEQTITSLLASGVTYDLECFFLHADSSL 145 (314) T ss_pred ccccccccc-CCccCCcccccccceeeeeEEEEEeecccHHHHHhhh-chhhHHHHHHHHHHHHHHHHHHHHhhccccCC Confidence 111 11222 2233455666677778888888888888888888775 4678888888899999999999999999864 Q ss_pred -------hCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCc-c-cccEEEeCHHHHHHHhhccCCCC Q lcl|NC_020082. 180 -------RGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRF-H-VPNTALMFPDLWNQANNQLMTGY 250 (354) Q Consensus 180 -------~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~-~-~p~~L~l~p~~~~~L~~~~~~~~ 250 (354) ....|+++.........++. ..+.++ +.+.+++..|... +. . +....+|++..+..+.+..-... T Consensus 146 ~s~~~~~~~p~G~l~~a~~~~~~~~~~-~~~~~~---~~~~~l~~sl~~~--yr~~~~~~~~~m~~~t~~~~r~~l~~~~ 219 (314) T protein:vir:41 146 TTGRELYRINDGWMKLAGNQYTDAEPE-DENWPL---NLFDGMMDELDTR--YLQLKPRMKFYVSNEIYNGYRKQLLVRE 219 (314) T ss_pred cCcccchhcchhhhhhcccceeecCcc-ccccHH---HHHHHHHHhcCch--hhcCCCceEEEecHHHHHHHHHHHhccC Confidence 24568887654433222110 112233 3444555554321 22 1 23478899988876643221111 Q ss_pred CCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhccccc-ccCcee Q lcl|NC_020082. 251 TDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ-MASLGI 329 (354) Q Consensus 251 ~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~-~~~~~~ 329 (354) +. +.+.. ...+.+..+...|..........+ .+.+ .|.+ -|++++.+.+...++..+-. .+.-.+ T Consensus 220 ~~--l~~~~-------~~~~~~~~l~G~PV~~~~~~~~~~--~~~~--~i~f-gd~~nlv~~~~~~ir~~~~~~a~~~~~ 285 (314) T protein:vir:41 220 TG--LGDSA-------LIGATGLQYDGIPIQYVPALDALG--DDKA--RALL-TVPTNLVYGFWRNIRIEPKRDAAMRRT 285 (314) T ss_pred Cc--ccchh-------hhCCCCceecceeeEecccccccC--CCCc--eEEE-echhheEEEeeceeEEeecccCcCCeE Confidence 11 11111 123556666666665555443322 2222 2333 35778777777777765532 222344 Q ss_pred EEeeeeeeeeEEEEC-cceeeeeecC Q lcl|NC_020082. 330 TVPAEYKISGTEFRY-PLCAAYVDMA 354 (354) Q Consensus 330 ~~~~~~~~gGv~i~~-P~ai~y~D~~ 354 (354) .+-...|++....-. =-+++++.-| T Consensus 286 ~~~~~~r~d~~~~~~~aa~~~~~~~~ 311 (314) T protein:vir:41 286 EYIASLRADCNYEDENAAVAAVIDMS 311 (314) T ss_pred EEEEEEEeceEEEEcCcEEEEEeecc Confidence 454555554332223 2334446666 No 79 >protein:vir:102655 Length: 322 # NCBI annotation: Hypothetical protein # Family: family:all:6384 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_052979;genbank:gi:50282923;genbank:GeneID:2948122 Probab=98.00 E-value=3.9e-06 Score=50.24 Aligned_cols=299 Identities=8% Similarity=-0.034 Sum_probs=142.5 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCce--eeEEEeeecccCcee---Eec Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYA--DTWMYRSYDGVTMGK---FIG 109 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~--~~~~~~~~~~~G~a~---~~~ 109 (354) |++.++.++.+.+..+-.-+|..+....+.- +++.....|... +-..+...... .++.-..+..+|+.. -.+ T Consensus 1 ~~~~~~~~~~~~Ms~~i~~~fv~qy~~~v~~-~~qq~~s~L~~t--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (322) T protein:vir:10 1 MKLNAIMSMLPLIAGDIDQAFVQTYETTLRI-LSQQKSAKLKQY--CQHKNESSESHNWETLASMDPDAVKRKRSRQQSA 77 (322) T ss_pred CcccceeeeeeeeechhhhHHHHHHHHHHHH-HHHHhhhhhhcc--cccccccccccceeeccccccccccccccccccc Confidence 7888888766666654334566332222222 222233222222 22222211111 111111111223222 233 Q ss_pred CCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecC Q lcl|NC_020082. 110 ANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNP 189 (354) Q Consensus 110 ~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p 189 (354) +..-|.|..+.........+..+..++.+ .+++.++ +..+....-.+++..+++++.|++++.|--+....|. + T Consensus 78 d~~~dtp~~~~~~~~r~~~~~d~~~~~~V--Dd~D~~k-~~~D~~~~~~~~~a~AL~R~~D~~I~~a~~g~a~~~~---~ 151 (322) T protein:vir:10 78 DGTYPTPVNNKPFAKRRTNVDTYDTGHVV--EQEDISQ-MLLDPNSALITSQAYAMARKTDDLIIAGAWKPASIKG---T 151 (322) T ss_pred CcccCCCccccccceEEEeecccccceec--chHHHHH-hhcCchHHHHHHHHHHhhhHHHHHHHhhhhccccccc---c Confidence 44446776666666666666666666555 4555543 4667778888899999999999988875332222221 1 Q ss_pred Cccceecccc-ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCc--hHHHHHHhcCcee Q lcl|NC_020082. 190 NVTLSSATKD-YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDR--TVMQHFMEANSYT 266 (354) Q Consensus 190 ~~~~~~~~~~-w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~--Tvl~~l~~n~~~~ 266 (354) +.++...+++ -...+..--++.|.++...|.+..---.++..++++|+.|..|..-. ..++. .=-+.|..++.. T Consensus 152 gt~v~~~ss~~i~~g~~g~t~~kl~~a~~~l~~~dvp~d~~R~~vv~p~~~~~LL~d~--~~ts~D~~~~~~l~~~G~i- 228 (322) T protein:vir:10 152 GQPVEFLATQEIGDGTKPISFDYVTEITERFLENEIEPEVSKVIVIGPTQARKLLQIT--EATSADYTSAMDLQSKGII- 228 (322) T ss_pred ccccccCCCcccccCccchhHHHHHHHHHHHHhcCCCCCCCeEEEeCHHHHHHHhcch--hhhhhhcccchhhhhcCee- Confidence 1111000000 00011112245677777777664321224457999999999997532 22211 112333333322 Q ss_pred ecccccceEEeeceeeeccccc----------cccccCcceEEEEEEcCcceEEEeeccchhccccc-c-cCceeEEeee Q lcl|NC_020082. 267 LLTGNELDIQIRFQLDAAELAA----------NGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQ-M-ASLGITVPAE 334 (354) Q Consensus 267 ~~~g~~l~I~~~~~L~~~~~~~----------~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~-~-~~~~~~~~~~ 334 (354) -.+-...|+....+.. .+...+.+-..++|.++ -+.+..-.+++.--.+ + +...+.+... T Consensus 229 ------g~~lGf~~i~s~~lp~~~~t~~~~~~~~~~~~~~~~~~a~~k~--Av~~a~~~dv~~~i~~~~~~~~a~~I~~~ 300 (322) T protein:vir:10 229 ------TNWMGYTWIVSTRLDKFDPTQWGMAAEDGPQGDEIWCIAMTDM--ALGYHSCKDIWTKVAEDPSASFAWRIYSA 300 (322) T ss_pred ------eeeeeEEEEEeccCCccccccccccccCCCCccceeEEEEecC--ceeEEEeeeeeEEeeccCCcchhhhhhhh Confidence 2233333433332221 11111223345677643 4444443333321111 1 2234556666 Q ss_pred eeeeeEEEECcceeeeeecC Q lcl|NC_020082. 335 YKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 335 ~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+|.+++ +|..++.+|.- T Consensus 301 ~~~Ga~ri-~~~gVv~i~~~ 319 (322) T protein:vir:10 301 FTADCVRV-EDEHIFKLRLK 319 (322) T ss_pred hhhCceEe-ccCcEEEEEEe Confidence 66665555 89999999888 No 80 >protein:vir:3991 Length: 404 # NCBI annotation: major structural protein # Family: family:all:21 # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116499;genbank:gi:14251132;genbank:GeneID:921252 Probab=97.98 E-value=9.4e-07 Score=53.63 Aligned_cols=313 Identities=10% Similarity=0.032 Sum_probs=147.2 Q ss_pred CcccccchH----Hhhhcccee--ecCccc----cccccchhh--hh------hhhhhcCCccccchhhhhHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQ----TIQGNQWLV--HKGYVS----RNGDQWVIN--NT------ALDAIGNPNVMLDADGGIAFYISQLAG 62 (354) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~--~~~~~~----~~~~~~~~~--~~------amda~~~~~~~~dA~~~~~fl~~~L~~ 62 (354) -.++.++.+ ......+.. .++... ....+.... +. .+.+....++.....+.+.++.. +. T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~t~~~gg~~iP--~~ 131 (404) T protein:vir:39 54 VRRDALREQLVEAQAEQVVNMREEEKGPLNKSEYELKDKFVKEFVNMVRNPMAFLNTVSSKTETSGSDSAAGLTIP--QD 131 (404) T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccchhhhHHHHHHHHHHHHhcchhhhhhhhhhhhhcccccCCceecc--HH Confidence 000000000 000000000 000000 000000000 00 01110011111122233344554 46 Q ss_pred HHHHHHHhhhccccchhhccccCCCCCceeeEEEee-ecccCceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 63 IEATVYETPYGDITYRSDVPMAANIPEYADTWMYRS-YDGVTMGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 63 id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~-~~~~G~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~ 140 (354) +.+.|++........+.++.+.. .+....++.+.. .+..+.+.+++..+. +|- ....++.....++.++.-+.+|. T Consensus 132 ~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~v~Eg~~-~~~~~~~~f~~i~~~~~k~~~~~~iS~ 209 (404) T protein:vir:39 132 IRTMINTLVRQYDSLQQYVRVES-VSTSNGSRVYEKWTDVTPLTVMDAEDGK-IPDLDNPRLTIIKYLIKRYAGIITATN 209 (404) T ss_pred HHHHHHHHHHhhhhHHhhcceee-ccCCcceEEEEeecCCccceeeecCccc-cccccccceeeEEeeeeeEEeeehhHH Confidence 67788888777777887776542 222333333333 334466788877544 553 34567788889999998888877 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) .=++.+ ..++..--....++++.+.+|+.+++|+.... +.. .. .+ +++|.+++.... T Consensus 210 ell~ds---~~~l~~~i~~~l~~~~~~~~d~~il~g~g~~~----------~~~-~~-----~~----~~~i~~~~~~~~ 266 (404) T protein:vir:39 210 TLLKDT---AENILAWLSSWIAKKVVVTRNQAIIAAMGTVP----------KKP-TI-----AK----FDDVITMINTSV 266 (404) T ss_pred HHHhhc---hHHHHHHHHHHHHHHHHHHHHHHHHhcccccc----------ccc-cc-----cc----HHHHHHHHHHhh Confidence 555433 45677788889999999999999999975421 111 11 12 344555544322 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. .....-.++|+|..|..|.+- -+..+.-++ ..++ ..+.+-.|...|...+..... +..+.+...++ T Consensus 267 ~~--~~~~~a~~v~n~~~~~~L~~l--kd~~G~~l~----~~~~---~~~~~~~l~G~pV~~~~~~~~-~~~~~~~~~~~ 334 (404) T protein:vir:39 267 DP--AIIATSSLLTNQSGLNKLALV--KTAEGKYLL----EPDP---TKPNSYLIKGKKVIVVADRWL-PNSGSTVYPLY 334 (404) T ss_pred hh--hhccCCEEEEcHHHHHHHHHh--hccCCceee----ccCc---CCCCcceecceeEEEeccccc-CccCCCccEEE Confidence 21 222334799999999999753 233343222 1111 112222343333332221111 11112222233 Q ss_pred EEEcCcceEEEeeccchhcccc-cc--c--CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAP-QM--A--SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~-~~--~--~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+.. +.+.+..-..++.... +. . .-...+.++.|++ +.+++|.+++.+.+. T Consensus 335 ~gd~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~~~~~~~ 391 (404) T protein:vir:39 335 YGDMS-QAITLFDRENMSLLPTNIGAGAFETDTTKIRVIDRFD-VKTTDSEALVAGSFT 391 (404) T ss_pred EEecc-ccEEEEeecceEEEEeccchhhhhhceeeEEEEeeec-cEEecccceEEEEee Confidence 22222 2233322233332211 11 1 1124556677775 788999999999988 No 81 >protein:vir:1268 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:21 # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690760;genbank:gi:22855000;genbank:GeneID:955203 Probab=97.93 E-value=1.8e-06 Score=52.05 Aligned_cols=306 Identities=8% Similarity=-0.002 Sum_probs=146.9 Q ss_pred CcccccchHHhh------------------hccce-eecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ------------------GNQWL-VHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLA 61 (354) Q Consensus 1 ~~~~~~~~~~~~------------------~~~~~-~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~ 61 (354) .....++..... .+... ...|... ....+. ........++.....+.+.+++. + T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~--~~~~~~~~a~~~~~~~~gg~lvP--~ 137 (397) T protein:vir:12 65 GGVNFVPEQERNPEGQRSQGQGNEERQQQYSKAFLKGLRGKRL---TDEERD--LLDSPEFRAMSGINDEDGGILIP--E 137 (397) T ss_pred HHhhhhhhhhhhhcccccccchhhHHHHHHHHHHHHHHhccCC---cHHHHH--HHhhhhhhhccccccccCcccCc--h Confidence 000000000000 00000 0000000 000000 00000011111111222334544 5 Q ss_pred HHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 62 GIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 62 ~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~ 140 (354) .+.+.|++........+.++++..- +...-.+.+......+.+.|++..+. +|..+ ...+......+.++....+|. T Consensus 138 ~~~~~ii~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~v~Eg~~-~~~~~~~~~~~v~~~~~k~~~~~~is~ 215 (397) T protein:vir:12 138 DIGRQIHEFKRQFEPLEQYVTVEPV-TTRSGTRLLEKNADMVPFSPVEELGN-LPEIDQPRFTKVSYSIIDYGGIMTLSN 215 (397) T ss_pred hHHHHHHHhhhhhhhHHhhcceeec-cCCceeEEEEEecCCcceeeeccccc-ccccccccceeEEeeheeeEeeehhhH Confidence 6677888888777777777654321 11122344444445566778877654 45333 456777888888888888876 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) .=++.+ ..++..--....++++++.+|+.+++|+....-.|++ + +++|.+++.... T Consensus 216 e~l~ds---~~~l~~~i~~~l~~~~~~~~d~~il~G~g~~~~~g~~-----------------~----~~~i~~~~~~~l 271 (397) T protein:vir:12 216 SMLNDS---DQAIMTYVAKWFAKKSVVTRNNLILAAIASLKKVDID-----------------G----LDGIKKALNVTL 271 (397) T ss_pred HHHhhc---hHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc-----------------c----HHHHHHHHhhcc Confidence 655433 4567777888899999999999999997653322221 1 345555443211 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) . ........++++|..|..|.+-. +..|. |+-..++ ..+.+-++...|.+....... + .+.++.. + T Consensus 272 ~--~~~~~~a~~~~n~~~~~~L~~lk--d~~G~----~l~~~~~---~~g~~~~l~G~pv~~~~~~~~-~-~~~~~~~-~ 337 (397) T protein:vir:12 272 D--PMVAPGSIVLTNQDGYDWLDTLK--DGTGR----YLLQPDP---TNPTKKLLDGRPVVPFTNRVL-K-TQKGKAP-L 337 (397) T ss_pred c--hhhhCCCEEEEcHHHHHHHHHhh--ccCCc----eeecccc---cCCCCccccceeeEEeccccc-c-cCCCccE-E Confidence 1 12334467999999999996532 33332 1211111 123333444444433221111 1 1122222 2 Q ss_pred EEEcCcceEEEeeccchhccccc-c----cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAPQ-M----ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~~-~----~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++-+=.+.+.+..-+.+++.-.. . ..=...+.++.+++ +.+++|.+|+.++++ T Consensus 338 ~~gd~~~~~~~~~~~~~~i~~~~~~~~~f~~~~~~~r~~~r~d-~~~~~~~a~~~~~~t 395 (397) T protein:vir:12 338 IIGNLKEAIVLFDREQQSIASTDTGAGAFETNSTKVRGIERED-VRKWDEDAVVFGQIT 395 (397) T ss_pred EEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEEe Confidence 23221233333322222221111 1 11134566777775 577999999999999 No 82 >protein:vir:4953 Length: 397 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049929;genbank:gi:9632900;genbank:GeneID:1262076 Probab=97.90 E-value=2.3e-06 Score=51.49 Aligned_cols=312 Identities=6% Similarity=-0.047 Sum_probs=147.3 Q ss_pred Cccccc----chHHhhhccceeecCc--cccccccchhhh-hhhhhhc-CC------ccccchhhhhHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTI----DAQTIQGNQWLVHKGY--VSRNGDQWVINN-TALDAIG-NP------NVMLDADGGIAFYISQLAGIEAT 66 (354) Q Consensus 1 ~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~amda~~-~~------~~~~dA~~~~~fl~~~L~~id~~ 66 (354) ..++.+ +...-.......-... ............ -++.... .. .+.+...+.+.++.. +.+.+. T Consensus 51 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~~~gg~~vP--~~~~~~ 128 (397) T protein:vir:49 51 MKRDMFKEQYTEARANEVANMSEEEKKPLTKSEEEVKAGFVKDFKNLVRGRYQNLLDSKTDASGSDAGLTIP--QDIQTA 128 (397) T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHhcchhHHHHHhhccccccCccccc--HhHHHH Confidence 000000 0000000000000000 000000000000 0000000 00 011111222344544 456678 Q ss_pred HHHhhhccccchhhccccCCCCCceeeEEEeee-cccCceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 67 VYETPYGDITYRSDVPMAANIPEYADTWMYRSY-DGVTMGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 67 v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~-~~~G~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) |++........++++.+..- +.....+.+... +..+.+.|++..+. +|- .....+.....++.++.-+.+|..=++ T Consensus 129 ii~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~i~~~~~k~~~~~~iS~ell~ 206 (397) T protein:vir:49 129 IHTLVSQYDSLQEYVNVENV-TTLTGSRVYEKWTDITGLANIDDEAGK-IADVDDPKLSLIKYTIKRYAGISTVTNSLLA 206 (397) T ss_pred HHHHHHhhhhHHhhhceeec-ccCccceEEEeeccCCcceeeecCccc-cccccccceeeEEeeeeeEEeeehhHHHHHh Confidence 88887777777777665432 222223334333 34567888877644 453 345677888899999888888765444 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) .+ ..++..--....++++++.+|+.+++|+......+ ...+ +++|.+++.++... T Consensus 207 ds---~~~l~~~i~~~l~~~~~~~~d~ai~~G~g~~~~~~-----------~~~~---------~d~i~~~~~~l~~~-- 261 (397) T protein:vir:49 207 DS---AENILAWLSGWIAKKVVVTRNKAILEAIAALPTKP-----------TLTK---------WDDIIDLEAKVDPA-- 261 (397) T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----------cccc---------HHHHHHHHHhhhhh-- Confidence 43 35677778888999999999999999975432111 1111 46677777777643 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK 304 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~ 304 (354) ......++|+|..|..|.+- -+..|.-++ ..++ ..+.+-.|...|......- ....+..+.. .++|-+ T Consensus 262 -~~~~a~~vmn~~~~~~l~~l--kd~~G~~l~----~~~~---~~~~~~~l~G~PV~~~~~~-~~~~~~~~~~-~i~~gd 329 (397) T protein:vir:49 262 -IKQTSFFLTNTSGFTALKKV--KNALGDYLM----ERDV---KSPTGYSIDGFAVKEVADR-WLANGTGGAM-PLYFGD 329 (397) T ss_pred -hcCCCEEEEcHHHHHHHHHh--hcCCCceee----ccCc---CCCCCceecceeeEEeccc-ccccccCCce-eEEEee Confidence 23456899999999999653 233343222 1111 1122223333333221110 0011122222 233322 Q ss_pred CcceEEEeeccchh--ccccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 305 SDRNLAMANPIPFR--MLAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 305 d~~~~~~~vp~~~~--~~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) =.+.+.+..-..++ +.+.. ...-...+.++.+++ +.+++|.+|+.+.++ T Consensus 330 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~~~~~~~ 383 (397) T protein:vir:49 330 LKQAVTLFDRQHMSLLSTNIGGGAFETDTTKVRVIDRFD-VVATDTEAFVPASFK 383 (397) T ss_pred ccceEEEEeecceEEEEeccccchhhcCceeEEEEeeeC-cEEecccceEEEEee Confidence 12223222212222 21111 011123445566664 688999999999999 No 83 >protein:vir:1025 Length: 408 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076679;genbank:gi:13095788;genbank:GeneID:920362 Probab=97.86 E-value=2.2e-06 Score=51.63 Aligned_cols=313 Identities=8% Similarity=0.011 Sum_probs=145.2 Q ss_pred CcccccchH----HhhhccceeecCcccc------ccccchhh-------hh-hhhhhcCCccccchhhhhHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQ----TIQGNQWLVHKGYVSR------NGDQWVIN-------NT-ALDAIGNPNVMLDADGGIAFYISQLAG 62 (354) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~-------~~-amda~~~~~~~~dA~~~~~fl~~~L~~ 62 (354) -.++.+..+ .-+...+..-.+.... ........ .. .+......++.....+.+.+++. +. T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~t~~~gg~~vP--~~ 131 (408) T protein:vir:10 54 VRRDALREQLVEAQAEQVVNMREEEKGPLNKSENELKDKFVKDFVNMVRNPMAFMNTVSSKTETSGSDSAAGLTIP--QD 131 (408) T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccchhhhHHHHHHHHHHHhhcchhhhhhhhhhhhhcccccCCceecc--Hh Confidence 000001100 0000111110000000 00000000 00 00000011122222333445555 45 Q ss_pred HHHHHHHhhhccccchhhccccCCCCCceeeEEEee-ecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 63 IEATVYETPYGDITYRSDVPMAANIPEYADTWMYRS-YDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 63 id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~-~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~ 140 (354) +.+.|++........+.++.+..- +.....+.+.. .+..+.+.+++..+. +|..+ ...+......+.++....+|. T Consensus 132 ~~~~Ii~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~i~~~~~k~~~~~~iS~ 209 (408) T protein:vir:10 132 IRTMINTLVRQYDSLQQYVRVESV-STSNGSRVYEKWTDVTPLTVMDAEDGK-IPDLDNPQLTIIKYLIKRYAGIITATN 209 (408) T ss_pred HHHHHHHHHHhhchhhhhcceeec-cCCcceEEEeeccccccceeeecCccc-cccccCcceeeEEeeeeeEEeeehhHH Confidence 677888888887777777654321 11112222222 234466778876544 45433 457788888888888888877 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) +=|+.+ ..++..--....++++...+|+-++.|+.... +..+ . .+ +++|.+++.... T Consensus 210 ell~ds---~~~l~~~i~~~l~~~~~~~~~~~il~g~g~~~----------~~~~-~-----~~----~~~l~~~~~~~~ 266 (408) T protein:vir:10 210 TSLKDT---AENILAWLSSWIAKKVVVTRNQAIIEVMKAAP----------KKPT-I-----AK----FDDVITMINTAV 266 (408) T ss_pred HHHhhc---hHHHHHHHHHHHHHHHHHHHHHHHhhcccccc----------cccc-c-----cc----HHHHHHHHHHhh Confidence 655543 45777778888999999999999999876421 1111 1 12 344444443222 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. +....-.++++|..|..|.+- -+..|.-+++ .++ .++.+-++...|......-... ....+.. .+ T Consensus 267 ~~--~~~~~a~~v~n~~~~~~l~~l--kd~~G~~i~~----~~~---~~~~~~~l~G~PV~~~~~~~~~-~~~~~~~-~i 333 (408) T protein:vir:10 267 DP--AIIATSSLLTNQSGLNKLALV--KTAEGKYLLE----PDP---TKPNSYLIKGKQVIVVADRWLP-NTGSTVY-PL 333 (408) T ss_pred hh--hhccCCEEEEcHHHHHHHHHh--hccCCceEec----cCc---CCCCCceecceeeEEecccccC-ccCCCce-EE Confidence 11 233345789999999999653 3444443332 111 1122223333333322110011 1111222 22 Q ss_pred EEEcCcceEEEeeccchhcccc-ccc--C--ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAP-QMA--S--LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~-~~~--~--~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|-+=.+.+.+..-..++.... +.. . -...+.++.|++ +.+.+|.++++++++ T Consensus 334 ~~gd~~~~~~~~~~~~~~v~~~~~~~~~f~~~~~~~r~~~r~d-~~v~~~~a~~~~~~~ 391 (408) T protein:vir:10 334 YYGDMSQAITLFDRENMSLLPTNIGAGAFETDTTKIRVIDRFD-VKATDSEALVAGSFS 391 (408) T ss_pred EEEehhccEEEEEecceEEEEcccccchhhcCceEEEEEEeec-cEEeccccEEEEEee Confidence 2221122233322222332211 111 1 124566677775 677889999999998 No 84 >protein:vir:4830 Length: 397 # NCBI annotation: MPL-7201 # Family: family:all:21 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038327;genbank:gi:9634653;genbank:GeneID:1262632 Probab=97.77 E-value=4.5e-06 Score=49.90 Aligned_cols=307 Identities=8% Similarity=-0.044 Sum_probs=143.6 Q ss_pred CcccccchHHhh------hccceeecCccccc-----------cccchhhh--hhhhhhcCCccccchhhhhHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ------GNQWLVHKGYVSRN-----------GDQWVINN--TALDAIGNPNVMLDADGGIAFYISQLA 61 (354) Q Consensus 1 ~~~~~~~~~~~~------~~~~~~~~~~~~~~-----------~~~~~~~~--~amda~~~~~~~~dA~~~~~fl~~~L~ 61 (354) ..++.++.+.-+ .+..-......... +..+.... .+..+ ....+.++ ++ ++.. + T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~~-gg-~~iP--~ 123 (397) T protein:vir:48 51 MKRDMFKEQYTEARANEVVNMSEEEKKPLTKSEEEVKAGFVKDFKNLVRGRYQNLLDS---KTDASGSD-AG-LTIP--Q 123 (397) T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhhhhHHHHH---hhccCCcc-cc-cccc--H Confidence 000000000000 00000000000000 00000000 01111 01111222 22 3333 4 Q ss_pred HHHHHHHHhhhccccchhhccccCCCCCceeeEEEee-ecccCceeEecCCCCcccee-eeccceeEEEEEEEEeeeeec Q lcl|NC_020082. 62 GIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRS-YDGVTMGKFIGANGQDLPRV-AQSAQMHTVPLGYAGNECHYT 139 (354) Q Consensus 62 ~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~-~~~~G~a~~~~~~~~dip~v-~~~~~~~~~pv~~~~~~~~~~ 139 (354) .+.+.|++........+.++.+.. .+.....+.+.. .+..+.+.+++..+. +|.. ....+......+.++.-+.+| T Consensus 124 ~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~~~~~k~~~~~~iS 201 (397) T protein:vir:48 124 DIQTAIHTLVRQYDSLQEYVNVEN-VTTLTGSRVYEKWADITGLAKLDDEAGS-IGTNDDPKLYPIRYAIKRYAGISTVT 201 (397) T ss_pred HHHHHHHHHHHHHHHHHhhhceee-ccCCcceEEEEeecCCCcceeeeccccc-cccccccceeeEEeeheeeeeehhhH Confidence 567788887777777777766542 122222233332 334456777766533 4543 346677788888888888887 Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 140 LDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSV 219 (354) Q Consensus 140 ~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l 219 (354) ..=|+.+ ..++..--....++++++.+|+.+++|+...+..| ... + +++|.+++.+| T Consensus 202 ~ell~ds---~~~l~~~v~~~l~~~~~~~~d~~il~G~g~~~~~~-----------~~~-----~----~d~i~~~~~~l 258 (397) T protein:vir:48 202 NSLLADS---AENILAWLSGWIAKKVVVTRNKAILEAIATLPTKP-----------TLT-----K----WDDIIDLQAKV 258 (397) T ss_pred HHHHhhc---hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----------ccc-----c----HHHHHHHHHHh Confidence 7655543 45677788888999999999999999975532211 111 1 35666676666 Q ss_pred HHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEE Q lcl|NC_020082. 220 INLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRY 299 (354) Q Consensus 220 ~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~ 299 (354) ... ...+..++++|..|..|.+.. +..|.-+++ .++ ..+.+-.|...|......... ..+..+...+ T Consensus 259 ~~~---~~~~a~~v~n~~~~~~L~~lk--d~~G~~i~~----~~~---~~~~~~~l~G~PV~~~~~~~~-~~~~~~~~~~ 325 (397) T protein:vir:48 259 DPA---IKQTSFFLTNTSGFTALKKVK--NAFGDYLME----RDV---KSPTGYSIDGFAVKEVADRWL-ANASSGAMPL 325 (397) T ss_pred hhh---hcCCCEEEECHHHHHHHHHhh--cCCCceeec----cCc---CCCCCceeccceeEEeccccc-CCcCCCceEE Confidence 532 234578999999999996532 333332221 111 112222333333322111001 1122233333 Q ss_pred EEEEcCcceEEEeeccchhc--cccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMANPIPFRM--LAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~vp~~~~~--~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.-+. .+.+.+..-..++. .... ...-...+.++.+++ +.+++|.+++.+.++ T Consensus 326 ~~gd~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~~~~~~~ 383 (397) T protein:vir:48 326 YFGDL-KQAVTLFDRQQMSLLSTNIGGGAFETDTTKIRVIDRFD-VVATDTESFVPASFK 383 (397) T ss_pred EEEec-cceEEEEeecceEEEEeccchhhhhcCceeEEEEeeec-cEEecccceEEEEec Confidence 32221 12222222122221 1110 111124555677775 577899999999998 No 85 >protein:vir:6242 Length: 390 # NCBI annotation: gp36 # Family: family:all:21 # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813696;swissprot:trembl:q859c1;genbank:gi:29366756;interpro:IPR006444;uniprot:Q859C1;genbank:GeneID:1258897 Probab=97.76 E-value=7.7e-06 Score=48.62 Aligned_cols=317 Identities=8% Similarity=-0.024 Sum_probs=152.1 Q ss_pred CcccccchHH--------------hh--hccceeecCccccc--cccchh-----hhhhhhhhcCCccccchhhhhHHHH Q lcl|NC_020082. 1 MAIKTIDAQT--------------IQ--GNQWLVHKGYVSRN--GDQWVI-----NNTALDAIGNPNVMLDADGGIAFYI 57 (354) Q Consensus 1 ~~~~~~~~~~--------------~~--~~~~~~~~~~~~~~--~~~~~~-----~~~amda~~~~~~~~dA~~~~~fl~ 57 (354) ..++.||.+. -. +..+.......... ....-+ ..-+...+......+.+.+++ ++. T Consensus 45 ~e~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~r~~~~~~~~~~~t~~~~g~-~~~ 123 (390) T protein:vir:62 45 TAVSDYDARIKRGIEAIKAIDPVTSLLSGLQGSGSGAQRSADVDDDATLRAGNLGEARSFEFAPEKRDGTKAGNPN-VLS 123 (390) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhcchHHHHHHhhhhhhhhHHHHhhhhhhcccccCCCc-ccc Confidence 1112222211 11 11111100000000 000000 000000000000112222222 232 Q ss_pred HHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeee Q lcl|NC_020082. 58 SQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECH 137 (354) Q Consensus 58 ~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~ 137 (354) . +.....+.+........|.+..+....+ ...+.+.+....+.+.|++..+ .+|..+...+......+.++.-+. T Consensus 124 ~--~~~~~~i~~~~~~~~~l~~~~~~~~~~~--~~~~~~p~~~~~~~a~wv~E~~-~~~~~~~~f~~i~~~~~k~~~~~~ 198 (390) T protein:vir:62 124 R--TLYGQLIAQAVERSAIMRGGATTFTTSD--ANPLDFTVITGRSSASIVGETA-EIPESYPATAQRSMGGFKYGFASV 198 (390) T ss_pred c--cchHHHHHHHHhhhhhhhhcceeeecCC--CceeEEEEEcCCcceeeecccc-cccccccceeeeEeeeeeEEeehH Confidence 2 2233444444444434444444432211 1235566777777888887654 478778888888899999998888 Q ss_pred ecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHH Q lcl|NC_020082. 138 YTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIF 217 (354) Q Consensus 138 ~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~ 217 (354) +|.+=|+.+ ..++..--....+.+++..+|+.+++|+.. -.|++|+++...........+ .-.+++|.+++. T Consensus 199 iS~ell~ds---~~~l~~~i~~~l~~~i~~~~d~~~l~G~G~--p~Gi~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~ 270 (390) T protein:vir:62 199 VSYEFATDQ---VLDLVGFLVSDAGPAIGDAMGRHFITGTGQ--PRGILTDASPATATFLATDTD---SKVSDALIDLFH 270 (390) T ss_pred HHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhhhccCCc--cccccccccccccceeccccc---ccchHHHHHHHH Confidence 887666654 446777788889999999999999999853 369999876543322222111 112566677777 Q ss_pred HHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcce Q lcl|NC_020082. 218 SVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKP 297 (354) Q Consensus 218 ~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d 297 (354) +|... +. ..-..+|+|+.+..|.+-. +..+.=++ .-++ ..|.+-++...|.+....... + T Consensus 271 ~l~~~--~~-~~a~~vmn~~~~~~L~~lk--d~~g~~l~----~~~~---~~g~~~~l~G~Pv~~~~~~p~--------~ 330 (390) T protein:vir:62 271 EVPSA--YR-ANAKYVVNDLRAAQMRKLK--DANGQYLW----QSGL---TVGAPSLFNGKVVETDDGMPA--------D 330 (390) T ss_pred hhhhh--hh-cCCEEEEchHHHHHHHHhh--ccCCCeee----cCCc---CCCccceecccceEEecCCCC--------c Confidence 66432 22 2236899999999996432 33332111 1000 112223343334433332211 1 Q ss_pred EEEEEEcCcceEEEeeccchhcccc-cc--cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 298 RYMVYDKSDRNLAMANPIPFRMLAP-QM--ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 298 ~~v~y~~d~~~~~~~vp~~~~~~~~-~~--~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . |+|- |-..+.+..-..++.... +. ..=...+....|++ +.+..|.|++.+.++ T Consensus 331 ~-i~~g-d~s~~~i~~~~~~~v~~~~~~~~~~~~~~~~~~~r~d-~~~~~~~A~~~l~~~ 387 (390) T protein:vir:62 331 K-ILFA-DLSKYRVRFAGSLRVDRSVDAKFSTDQIVYRFLQRAD-GLLVDARGAKVLTVT 387 (390) T ss_pred c-EEEe-eccceeEEeecceEEEeeccccccCCcEEEEEEEEeC-cEeechhheEEEEee Confidence 1 2221 111111111122222110 11 11124456678876 579999999999999 No 86 >protein:vir:4092 Length: 390 # NCBI annotation: major capsid protein a # Family: family:all:635 # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510986;swissprot:trembl:q8w604;genbank:gi:17488508;uniprot:Q8W604;genbank:GeneID:1260361 Probab=97.76 E-value=1.1e-05 Score=47.75 Aligned_cols=311 Identities=8% Similarity=-0.048 Sum_probs=146.4 Q ss_pred Cc-------cc---ccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 1 MA-------IK---TIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYET 70 (354) Q Consensus 1 ~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~ 70 (354) |. ++ ...............+|... . .+..+. +..++... ..+ +.+.++.. +.+..+|++. T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l-~~~~r~--~~~~~~~~--~~~--~~gg~lvP--~~~~~~I~~~ 107 (390) T protein:vir:40 38 MAEQIQNNIIAQARKEVNREMNDNNVLASRGANA-L-TSDESK--YYNEVIAG--NGF--AGVTALLP--PTVFERVFED 107 (390) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh-c-cHHHHH--HHHHHHhc--cCc--ccCccccc--HHHHHHHHHH Confidence 00 00 00000000000111111111 1 011110 12221111 112 22334444 4566777776 Q ss_pred hhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc-eeeeccceeEEEEEEEEeeeeecHHHHHHHHHh Q lcl|NC_020082. 71 PYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP-RVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAM 149 (354) Q Consensus 71 ~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip-~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~ 149 (354) ....-..++++.+..- +. ....+......+.+.|++..+. +| ..+...+......+.++.-+.+|.+=|+.+ T Consensus 108 ~~~~s~i~~~~~~~~~-~~--~~~~i~~~~~~~~a~~~~E~~~-~~~~~~~~f~~i~l~~~k~~~~i~iS~ell~ds--- 180 (390) T protein:vir:40 108 LTVEHPLLSKINFVNT-TA--TTEWIISVGDVATAWWGPLCAE-IKEVLDNGFDKIQTGMYKLSAYIPVCNAMLDLG--- 180 (390) T ss_pred HHhhhhhhhhceeeec-CC--ceeEEEEEcCCcceeeeccccc-cCccccccceeeEeeeeeEEEeehhhHHHHhcc--- Confidence 6666556666655432 22 2334455566777888776543 33 345667788888888888888886666544 Q ss_pred CCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecc--ccccccCHHHHHHHHHHHHHHHHHHhCCcc Q lcl|NC_020082. 150 NMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSAT--KDYKTMNGQELFNMLNAPIFSVINLSRRFH 227 (354) Q Consensus 150 g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~--~~w~~~T~~ei~~di~~~~~~l~~~s~g~~ 227 (354) ..++..--....+++++..+|+.+++|+....-.|++|..+....... +...+-|.+.+.+.+..+...+........ T Consensus 181 ~~~l~~~i~~~la~~i~~~~~~a~l~G~G~~~P~Gil~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~~~~ 260 (390) T protein:vir:40 181 PSWLDQYVRTILGEAMALGLEAGIVNGSGKDQPIGMMRDLNNVTAGEHPVKTATPLTDLTPATLATKVMLPLTDNGKKSV 260 (390) T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccceeeeccccccccccccccccccchhhHHHHHHHHHHHhhcchhhhh Confidence 446888888999999999999999999876667899998754322111 111112233333333333333322211122 Q ss_pred cccEEEeCHHHHH-HHhh-ccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcC Q lcl|NC_020082. 228 VPNTALMFPDLWN-QANN-QLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKS 305 (354) Q Consensus 228 ~p~~L~l~p~~~~-~L~~-~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d 305 (354) .--.++|+|..+. +|.. +.+.+..|. |+.... ..+.|.+.+.... .++ ++|- | T Consensus 261 ~~a~~i~n~~t~~~~l~~~~~~~d~~G~----~v~~~~-----------~~g~pvv~~~~~p------~~~---i~~G-d 315 (390) T protein:vir:40 261 SDAILVINPADYWSKIYAATSYMTPQGV----WVTGIL-----------PVPLEIVQSVAVP------VGK---AVAG-R 315 (390) T ss_pred cCceEEEcchhHHHHHHHHhhccCCCCc----cccccC-----------CCceeEEEcCCCC------CCc---EEEE-e Confidence 3346788887643 3321 112222332 121110 1122222222111 111 2221 1 Q ss_pred cceEEEeeccchhcccc-ccc--CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 306 DRNLAMANPIPFRMLAP-QMA--SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 306 ~~~~~~~vp~~~~~~~~-~~~--~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+.+..-..+++... +.. .-...+....|++ +.++.|.|++.+.|+ T Consensus 316 ~s~~~i~~~~~~~v~~~~~~~f~~~~~~~r~~~r~d-g~v~~~~A~~~l~~~ 366 (390) T protein:vir:40 316 AKDYFMGIGSEQVIRTSTEYRLLDDETLYYAKQYAN-GRPKDNSSFLVFDIT 366 (390) T ss_pred eceEEEEeecceEEEecchhhhhcCcEEEEEEEEeC-CEEecccceEEEEee Confidence 11122222223332211 221 2235566678875 567779999999999 No 87 >protein:vir:107593 Length: 392 # NCBI annotation: major capsid protein, HK97 family # Family: family:all:21 # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338188;genbank:gi:77020144;genbank:GeneID:3703724 Probab=97.76 E-value=7.1e-06 Score=48.80 Aligned_cols=311 Identities=8% Similarity=0.013 Sum_probs=142.2 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcC-----------------CccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN-----------------PNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~-----------------~~~~~dA~~~~~fl~~~L~~i 63 (354) -..+.++....+......-...........-. ...+.+... ..+.....+.+.+++. +.+ T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~~gg~~vP--~~~ 122 (392) T protein:vir:10 46 DLQRSLDEAETEERNNGREVETRNVDGEMEYR-DVFMKALRNKPLNAEEREFLEDDLEQRAMSGLTGEDGGLVIP--QDI 122 (392) T ss_pred HHHHHHHHHHHHHhhccccccccCccchHHHH-HHHHHHHhcccccHHHHHHHhhhhhhhhccccccCCCceecc--hhH Confidence 00111111111100000000000000000000 000000000 0011111223344444 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~E 142 (354) .+.|++.....-..+.++.+.. .+.....+.+......+.+.|++..+. .|..+ ...+......+.++..+.+|.+= T Consensus 123 ~~~ii~~~~~~s~l~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~l~~~k~~~~~~iS~el 200 (392) T protein:vir:10 123 QTQINELARSFDALEQYVTVEP-VRTRSGSRVLEKNSDMIPFAEITEMGE-IPETDNPKFSNVQYAVKDRAGILPLSRSL 200 (392) T ss_pred HHHHHHHHHhhhhhhhhceeee-ccCCceeEEEEeecCCccceeeccccc-ccccccccceeEEeeeeeEEEeehhhHHH Confidence 6778887777777767665432 122222333444444556778877654 44333 45677788888888888888876 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) |+.+ ..+|..--....++++++.+|..+++|+......|. . + +++|.+++...... T Consensus 201 l~ds---~~~l~~~i~~~l~~~i~~~~d~~~~~g~g~~~~~~~------------~-----~----~d~i~~~~~~~l~~ 256 (392) T protein:vir:10 201 LQDS---DQNILKYVTKWLGKKSKVTRNVLILGVIEKLTKQAI------------K-----S----LDDIKDVLNVKLDP 256 (392) T ss_pred Hhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCc------------c-----C----HHHHHHHHHHhhhh Confidence 6554 356888888899999999999999988765332111 1 1 24455544322221 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceee---eccccccccccCcceEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLD---AAELAANGVSNSNKPRY 299 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~---~~~~~~~g~g~~g~d~~ 299 (354) .....-.++|+|+.|..|.+-. +..|.-++ ..++ ..+.+-+|...|.+. +......+ ...+... T Consensus 257 --~~~~~a~~vm~~~~~~~L~~lk--d~~G~~l~----~~~~---~~~~~~tllG~~~v~~~~~~~~~~~~-~~~~~~~- 323 (392) T protein:vir:10 257 --AISPNAILLTNQDGFNYLDKLK--DKDGKYIL----QSDP---TQKNKKLFAGTNPVVVVSNRFLKSKG-TTAKKAP- 323 (392) T ss_pred --hhccCCEEEEcHHHHHHHHHhh--ccCCCeEe----ecCc---cCCccccccCcccEEEecccccCCCc-ccCCceE- Confidence 2233457999999999996532 33332111 1110 011111222221111 11111111 1122222 Q ss_pred EEEEcCcceEEEee--ccchhccccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMAN--PIPFRMLAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~v--p~~~~~~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+.. .+.+.+.+.. ...-...+.++.+++ +.+++|.+|+.+.++ T Consensus 324 ~~~gdfs~~~~i~~~~~~~~~~~~~~~~~f~~~~~~~r~~~r~d-~~v~~~~a~~~l~~~ 382 (392) T protein:vir:10 324 LIIGDLKEAIVLFKREDMELASTDVGGKAFTRNTLDLRAIQRDD-VQMWDNEAAVYGEID 382 (392) T ss_pred EEEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEec Confidence 23321112222222 2222222211 111134567788876 688899999999998 No 88 >protein:vir:102873 Length: 392 # NCBI annotation: major capsid protein, HK97 family # Family: family:all:21 # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338137;genbank:gi:77020198;genbank:GeneID:3703782 Probab=97.76 E-value=7.1e-06 Score=48.80 Aligned_cols=311 Identities=8% Similarity=0.013 Sum_probs=142.2 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcC-----------------CccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN-----------------PNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~-----------------~~~~~dA~~~~~fl~~~L~~i 63 (354) -..+.++....+......-...........-. ...+.+... ..+.....+.+.+++. +.+ T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~~gg~~vP--~~~ 122 (392) T protein:vir:10 46 DLQRSLDEAETEERNNGREVETRNVDGEMEYR-DVFMKALRNKPLNAEEREFLEDDLEQRAMSGLTGEDGGLVIP--QDI 122 (392) T ss_pred HHHHHHHHHHHHHhhccccccccCccchHHHH-HHHHHHHhcccccHHHHHHHhhhhhhhhccccccCCCceecc--hhH Confidence 00111111111100000000000000000000 000000000 0011111223344444 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~E 142 (354) .+.|++.....-..+.++.+.. .+.....+.+......+.+.|++..+. .|..+ ...+......+.++..+.+|.+= T Consensus 123 ~~~ii~~~~~~s~l~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~l~~~k~~~~~~iS~el 200 (392) T protein:vir:10 123 QTQINELARSFDALEQYVTVEP-VRTRSGSRVLEKNSDMIPFAEITEMGE-IPETDNPKFSNVQYAVKDRAGILPLSRSL 200 (392) T ss_pred HHHHHHHHHhhhhhhhhceeee-ccCCceeEEEEeecCCccceeeccccc-ccccccccceeEEeeeeeEEEeehhhHHH Confidence 6778887777777767665432 122222333444444556778877654 44333 45677788888888888888876 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) |+.+ ..+|..--....++++++.+|..+++|+......|. . + +++|.+++...... T Consensus 201 l~ds---~~~l~~~i~~~l~~~i~~~~d~~~~~g~g~~~~~~~------------~-----~----~d~i~~~~~~~l~~ 256 (392) T protein:vir:10 201 LQDS---DQNILKYVTKWLGKKSKVTRNVLILGVIEKLTKQAI------------K-----S----LDDIKDVLNVKLDP 256 (392) T ss_pred Hhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCc------------c-----C----HHHHHHHHHHhhhh Confidence 6554 356888888899999999999999988765332111 1 1 24455544322221 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceee---eccccccccccCcceEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLD---AAELAANGVSNSNKPRY 299 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~---~~~~~~~g~g~~g~d~~ 299 (354) .....-.++|+|+.|..|.+-. +..|.-++ ..++ ..+.+-+|...|.+. +......+ ...+... T Consensus 257 --~~~~~a~~vm~~~~~~~L~~lk--d~~G~~l~----~~~~---~~~~~~tllG~~~v~~~~~~~~~~~~-~~~~~~~- 323 (392) T protein:vir:10 257 --AISPNAILLTNQDGFNYLDKLK--DKDGKYIL----QSDP---TQKNKKLFAGTNPVVVVSNRFLKSKG-TTAKKAP- 323 (392) T ss_pred --hhccCCEEEEcHHHHHHHHHhh--ccCCCeEe----ecCc---cCCccccccCcccEEEecccccCCCc-ccCCceE- Confidence 2233457999999999996532 33332111 1110 011111222221111 11111111 1122222 Q ss_pred EEEEcCcceEEEee--ccchhccccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMAN--PIPFRMLAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~v--p~~~~~~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+.. .+.+.+.+.. ...-...+.++.+++ +.+++|.+|+.+.++ T Consensus 324 ~~~gdfs~~~~i~~~~~~~~~~~~~~~~~f~~~~~~~r~~~r~d-~~v~~~~a~~~l~~~ 382 (392) T protein:vir:10 324 LIIGDLKEAIVLFKREDMELASTDVGGKAFTRNTLDLRAIQRDD-VQMWDNEAAVYGEID 382 (392) T ss_pred EEEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEec Confidence 23321112222222 2222222211 111134567788876 688899999999998 No 89 >protein:vir:102082 Length: 392 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512315;genbank:gi:89152484;genbank:GeneID:3953075 Probab=97.76 E-value=7.1e-06 Score=48.80 Aligned_cols=311 Identities=8% Similarity=0.013 Sum_probs=142.2 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcC-----------------CccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN-----------------PNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~-----------------~~~~~dA~~~~~fl~~~L~~i 63 (354) -..+.++....+......-...........-. ...+.+... ..+.....+.+.+++. +.+ T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~~gg~~vP--~~~ 122 (392) T protein:vir:10 46 DLQRSLDEAETEERNNGREVETRNVDGEMEYR-DVFMKALRNKPLNAEEREFLEDDLEQRAMSGLTGEDGGLVIP--QDI 122 (392) T ss_pred HHHHHHHHHHHHHhhccccccccCccchHHHH-HHHHHHHhcccccHHHHHHHhhhhhhhhccccccCCCceecc--hhH Confidence 00111111111100000000000000000000 000000000 0011111223344444 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~E 142 (354) .+.|++.....-..+.++.+.. .+.....+.+......+.+.|++..+. .|..+ ...+......+.++..+.+|.+= T Consensus 123 ~~~ii~~~~~~s~l~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~l~~~k~~~~~~iS~el 200 (392) T protein:vir:10 123 QTQINELARSFDALEQYVTVEP-VRTRSGSRVLEKNSDMIPFAEITEMGE-IPETDNPKFSNVQYAVKDRAGILPLSRSL 200 (392) T ss_pred HHHHHHHHHhhhhhhhhceeee-ccCCceeEEEEeecCCccceeeccccc-ccccccccceeEEeeeeeEEEeehhhHHH Confidence 6778887777777767665432 122222333444444556778877654 44333 45677788888888888888876 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) |+.+ ..+|..--....++++++.+|..+++|+......|. . + +++|.+++...... T Consensus 201 l~ds---~~~l~~~i~~~l~~~i~~~~d~~~~~g~g~~~~~~~------------~-----~----~d~i~~~~~~~l~~ 256 (392) T protein:vir:10 201 LQDS---DQNILKYVTKWLGKKSKVTRNVLILGVIEKLTKQAI------------K-----S----LDDIKDVLNVKLDP 256 (392) T ss_pred Hhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCc------------c-----C----HHHHHHHHHHhhhh Confidence 6554 356888888899999999999999988765332111 1 1 24455544322221 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceee---eccccccccccCcceEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLD---AAELAANGVSNSNKPRY 299 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~---~~~~~~~g~g~~g~d~~ 299 (354) .....-.++|+|+.|..|.+-. +..|.-++ ..++ ..+.+-+|...|.+. +......+ ...+... T Consensus 257 --~~~~~a~~vm~~~~~~~L~~lk--d~~G~~l~----~~~~---~~~~~~tllG~~~v~~~~~~~~~~~~-~~~~~~~- 323 (392) T protein:vir:10 257 --AISPNAILLTNQDGFNYLDKLK--DKDGKYIL----QSDP---TQKNKKLFAGTNPVVVVSNRFLKSKG-TTAKKAP- 323 (392) T ss_pred --hhccCCEEEEcHHHHHHHHHhh--ccCCCeEe----ecCc---cCCccccccCcccEEEecccccCCCc-ccCCceE- Confidence 2233457999999999996532 33332111 1110 011111222221111 11111111 1122222 Q ss_pred EEEEcCcceEEEee--ccchhccccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMAN--PIPFRMLAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~v--p~~~~~~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+.. .+.+.+.+.. ...-...+.++.+++ +.+++|.+|+.+.++ T Consensus 324 ~~~gdfs~~~~i~~~~~~~~~~~~~~~~~f~~~~~~~r~~~r~d-~~v~~~~a~~~l~~~ 382 (392) T protein:vir:10 324 LIIGDLKEAIVLFKREDMELASTDVGGKAFTRNTLDLRAIQRDD-VQMWDNEAAVYGEID 382 (392) T ss_pred EEEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEec Confidence 23321112222222 2222222211 111134567788876 688899999999998 No 90 >protein:vir:105004 Length: 392 # NCBI annotation: putative major capsid protein # Family: family:all:21 # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459969;genbank:gi:85701384;genbank:GeneID:3882145 Probab=97.76 E-value=7.1e-06 Score=48.80 Aligned_cols=311 Identities=8% Similarity=0.013 Sum_probs=142.2 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcC-----------------CccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN-----------------PNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~-----------------~~~~~dA~~~~~fl~~~L~~i 63 (354) -..+.++....+......-...........-. ...+.+... ..+.....+.+.+++. +.+ T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~~gg~~vP--~~~ 122 (392) T protein:vir:10 46 DLQRSLDEAETEERNNGREVETRNVDGEMEYR-DVFMKALRNKPLNAEEREFLEDDLEQRAMSGLTGEDGGLVIP--QDI 122 (392) T ss_pred HHHHHHHHHHHHHhhccccccccCccchHHHH-HHHHHHHhcccccHHHHHHHhhhhhhhhccccccCCCceecc--hhH Confidence 00111111111100000000000000000000 000000000 0011111223344444 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~E 142 (354) .+.|++.....-..+.++.+.. .+.....+.+......+.+.|++..+. .|..+ ...+......+.++..+.+|.+= T Consensus 123 ~~~ii~~~~~~s~l~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~l~~~k~~~~~~iS~el 200 (392) T protein:vir:10 123 QTQINELARSFDALEQYVTVEP-VRTRSGSRVLEKNSDMIPFAEITEMGE-IPETDNPKFSNVQYAVKDRAGILPLSRSL 200 (392) T ss_pred HHHHHHHHHhhhhhhhhceeee-ccCCceeEEEEeecCCccceeeccccc-ccccccccceeEEeeeeeEEEeehhhHHH Confidence 6778887777777767665432 122222333444444556778877654 44333 45677788888888888888876 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) |+.+ ..+|..--....++++++.+|..+++|+......|. . + +++|.+++...... T Consensus 201 l~ds---~~~l~~~i~~~l~~~i~~~~d~~~~~g~g~~~~~~~------------~-----~----~d~i~~~~~~~l~~ 256 (392) T protein:vir:10 201 LQDS---DQNILKYVTKWLGKKSKVTRNVLILGVIEKLTKQAI------------K-----S----LDDIKDVLNVKLDP 256 (392) T ss_pred Hhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCc------------c-----C----HHHHHHHHHHhhhh Confidence 6554 356888888899999999999999988765332111 1 1 24455544322221 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceee---eccccccccccCcceEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLD---AAELAANGVSNSNKPRY 299 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~---~~~~~~~g~g~~g~d~~ 299 (354) .....-.++|+|+.|..|.+-. +..|.-++ ..++ ..+.+-+|...|.+. +......+ ...+... T Consensus 257 --~~~~~a~~vm~~~~~~~L~~lk--d~~G~~l~----~~~~---~~~~~~tllG~~~v~~~~~~~~~~~~-~~~~~~~- 323 (392) T protein:vir:10 257 --AISPNAILLTNQDGFNYLDKLK--DKDGKYIL----QSDP---TQKNKKLFAGTNPVVVVSNRFLKSKG-TTAKKAP- 323 (392) T ss_pred --hhccCCEEEEcHHHHHHHHHhh--ccCCCeEe----ecCc---cCCccccccCcccEEEecccccCCCc-ccCCceE- Confidence 2233457999999999996532 33332111 1110 011111222221111 11111111 1122222 Q ss_pred EEEEcCcceEEEee--ccchhccccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMAN--PIPFRMLAPQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~v--p~~~~~~~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+.. .+.+.+.+.. ...-...+.++.+++ +.+++|.+|+.+.++ T Consensus 324 ~~~gdfs~~~~i~~~~~~~~~~~~~~~~~f~~~~~~~r~~~r~d-~~v~~~~a~~~l~~~ 382 (392) T protein:vir:10 324 LIIGDLKEAIVLFKREDMELASTDVGGKAFTRNTLDLRAIQRDD-VQMWDNEAAVYGEID 382 (392) T ss_pred EEEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEec Confidence 23321112222222 2222222211 111134567788876 688899999999998 No 91 >protein:vir:98635 Length: 377 # NCBI annotation: major coat protein # Family: family:all:635 # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039923;genbank:gi:126011098;genbank:GeneID:4818471 Probab=97.74 E-value=5e-06 Score=49.62 Aligned_cols=312 Identities=7% Similarity=-0.044 Sum_probs=140.2 Q ss_pred Cc-----------------ccccch----H--HhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHH Q lcl|NC_020082. 1 MA-----------------IKTIDA----Q--TIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYI 57 (354) Q Consensus 1 ~~-----------------~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~ 57 (354) -+ .+.++- + .-.++.+.-.++.. ........ +.+++.. ..+++++.+++ T Consensus 20 ~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~lt~ee~~---~~~~~~~----~~~~~~gg~~v 91 (377) T protein:vir:98 20 AKISAGATSEEQEKLFEAAFTTMGDEILAKNEEEMERMFDLRDKNR-ELTAEEIK---FFNDIDK----NVGGKDKFKLL 91 (377) T ss_pred HHHHhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCc-ccCHHHHH---HHHHHHh----ccCCCCCcccc Confidence 00 000000 0 00122221111111 11111110 2222111 11233333444 Q ss_pred HHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeee Q lcl|NC_020082. 58 SQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECH 137 (354) Q Consensus 58 ~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~ 137 (354) . +.+..+|++.....=..|.++.+.+-.+ . ..+...+..+.+.|++..+.--+..+...+....+.+.+..-.. T Consensus 92 P--~~~~~~I~~~l~~~s~i~~~~~v~~~~~-~---~~~~~~~~~~~a~w~~e~~~~~~~~~~~f~~i~l~~~kl~a~~~ 165 (377) T protein:vir:98 92 P--EETMVQVFDDLVAEHPLLKVINFKNTSL-R---LKALTAETSGTAVWGDIFGEIKGQLKQAFKEQDFSQFKLTAFVV 165 (377) T ss_pred C--HHHHHHHHHHHHHhhhhhhheeeEecCc-c---eEEEEecCCcceeEeecccccCcccCccceeEeecceeEEeeec Confidence 4 4455667665554444444444432211 1 23455667788888776543223345566777888888888778 Q ss_pred ecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHH---HHHHHH- Q lcl|NC_020082. 138 YTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQE---LFNMLN- 213 (354) Q Consensus 138 ~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~e---i~~di~- 213 (354) ++.+=|+.+ ..++..--....++++++.+++.+++|+....-.|||+++........+.+.+.+... .+.++. T Consensus 166 is~elL~ds---~~~ie~~i~~~la~~~a~~~~~a~i~G~G~~qP~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (377) T protein:vir:98 166 IPKDALKFG---PKWIKQFITEQLKEAIAVALELAIVKGDGLLQPVGLLKDLSQPTVDQSTGRDITTYKTDKEAIADLSD 242 (377) T ss_pred ccHHhhhcc---HhHHHHHHHHHHHHHHHHHHhhceEeccCCCcceeeeecccccccccccccccccccchhhhHhhhhh Confidence 876655544 4478888888999999999999999999888889999987543322222221111110 111110 Q ss_pred -----------HHHHHHH----HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee Q lcl|NC_020082. 214 -----------APIFSVI----NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 214 -----------~~~~~l~----~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~ 278 (354) -+.+.+. ..-+...+.+.++++|..+..+.-.+...+ .++.+...-|.|+.+.. T Consensus 243 ~~~~~~~~~a~~~m~~~t~~~~~klkd~~G~~i~~~n~~~~~~~~p~~~~~~----------~~G~~~t~lg~p~~vv~- 311 (377) T protein:vir:98 243 LTPDNAPKKLVPVMKHLSVNDKKRPLKIAGQVKLILNPEDRWALEAQFTSRN----------QFGEYVTVLPHGITILE- 311 (377) T ss_pred hchhHHHHHHHHHHHHHHHHHHhhhhccCCceEEEecccchhhccccccccC----------CCCccccccCCCceEEe- Confidence 0111111 001223455677777776554431110000 11111111122322221 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCc--eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASL--GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~--~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.......+--+...++++.++. -+++..-. +.... ...+....|.+ ..++.|.+++.+||+ T Consensus 312 ----s~~~p~~~i~fgdf~~Y~i~~r~--~~~i~~~~-------~~~~~~d~~~f~~~~r~d-g~~~~~~a~~vl~i~ 375 (377) T protein:vir:98 312 ----SLAVETGKAIAFVANRYDAFMAT--ASTIEEYD-------QTFAMEDLQLYLTKNYFY-GKAKDNHTAALLTLA 375 (377) T ss_pred ----cCCCCcccEEEEEecceeEEeec--ceEEEeec-------hhhhhcCceEEEEEEEEc-CEEeccCcEEEEEEe Confidence 11100000000011112333322 12221111 11111 23344566665 488999999999999 No 92 >protein:vir:4159 Length: 315 # NCBI annotation: structural protein # Family: family:all:1377 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046968;genbank:gi:9630538;genbank:GeneID:1261712 Probab=97.73 E-value=1.5e-05 Score=46.99 Aligned_cols=302 Identities=12% Similarity=0.051 Sum_probs=140.4 Q ss_pred ccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhcc Q lcl|NC_020082. 3 IKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVP 82 (354) Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~ 82 (354) |-|||.=. .|- -.+. ...+++ ++.++.+|..+- .+ ++++.....-..|+... T Consensus 1 ~~~~~~~~---------~~~-------------~~~~--~k~~t~-~d~~Gg~l~P~~--~~-~~i~~~~e~s~~l~~~~ 52 (315) T protein:vir:41 1 MLTIEDIR---------GGK-------------PFEI--VPKIDV-PDLGRGVLSVDR--FG-EFVKAVRDSAVIIPEAR 52 (315) T ss_pred Ccccchhh---------cCC-------------hhhh--hhhcCC-cCCCCceechHH--HH-HHHHHHHhhhhhhhhce Confidence 33333211 000 0111 111222 233444454422 22 23333333333445544 Q ss_pred ccCCCCCceeeEEEe-eecccCce-eEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHH Q lcl|NC_020082. 83 MAANIPEYADTWMYR-SYDGVTMG-KFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARL 160 (354) Q Consensus 83 v~~~~~~~~~~~~~~-~~~~~G~a-~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~a 160 (354) +..+.......+.-. ....+..+ .+.+. ....+..+...+....+.+.+..-..++.+-|+.+. .+.++....... T Consensus 53 vi~~~~~~~~~i~~~g~~~~~~~g~~~~~~-~~~~~~~~~~f~~~~l~~~~l~~~~~it~elL~D~~-~~~~~e~~l~~~ 130 (315) T protein:vir:41 53 IDNALKSYEKDISRLSLVLDVGPGRDETGQ-KLAPPESTAEVKTNTLYMREMVTKVVIHEDAIEDNI-EGKAFEQKIVTL 130 (315) T ss_pred eeeccccccccccccccCcccccccccccC-cCCCCCCccccceeeeceeeeeeeccccHHHHHhhh-ccccHHHHHHHH Confidence 433222221111000 00001111 12222 222344445566666777787777788888887654 467899999999 Q ss_pred HHHHHHHHhhheeeeeehhh------CceeeeecCCccceeccccccccC-HHHHHHHHHHHHHHHHHHhCCcc--cccE Q lcl|NC_020082. 161 AFRGAEEHSQSVAYFGDSSR------GMYGLFNNPNVTLSSATKDYKTMN-GQELFNMLNAPIFSVINLSRRFH--VPNT 231 (354) Q Consensus 161 A~~~~~~~~n~~~f~G~~~~------gi~GLlN~p~~~~~~~~~~w~~~T-~~ei~~di~~~~~~l~~~s~g~~--~p~~ 231 (354) .++++++.++...|+|+... ...|+|+..+..+.....++++.+ +.+.+ .+++..|-.. +.. +.-. T Consensus 131 ~a~~~a~~~~~~~~nGdg~s~~p~~~~~~G~l~~a~~~~~~~~~~~~a~~~~~d~l---~~l~~sl~~~--yr~~~~~~~ 205 (315) T protein:vir:41 131 LGEGISYVLEKYYLHGDTSSSDPLLRMSDGWLKLASEKLTESDVDPEAEDWPMNLF---DTMIESLPTP--YRNNLPNMK 205 (315) T ss_pred HHHHHHHHHHHHhhccCCcCcCccccccccceecccccccccccccccccccHHHH---HHHHHhcChH--HhhcCCceE Confidence 99999999999999998743 456888876654433334444322 22333 3333333221 221 2347 Q ss_pred EEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEE Q lcl|NC_020082. 232 ALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAM 311 (354) Q Consensus 232 L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~ 311 (354) .+|+++.+..+.+-. ++.+.-+++-. ...+.+.++...|..........+.+ +. .|.+. |.+++.. T Consensus 206 ~imn~~t~~~~rklk--~~~g~~lw~~~-------~~~g~~~tl~G~PV~~~~~m~~~~~~---~~-~ilf~-d~~nl~~ 271 (315) T protein:vir:41 206 FYVTWDIYRAYRDAL--KGRETGLGDQA-------LTGANSILYDGRPVQYVPALEALNDG---KS-RALFV-VPTQLVY 271 (315) T ss_pred EEEcHHHHHHHHHHh--ccCCCccccch-------hhcCCCceecccceEecccccccCCC---Cc-cEEEe-cccceEE Confidence 899999887764322 22222122111 11345566666565544433222221 11 23333 3555555 Q ss_pred eeccchhccccc-ccCceeEEeeeeeeeeE-EEECcceeeeeec Q lcl|NC_020082. 312 ANPIPFRMLAPQ-MASLGITVPAEYKISGT-EFRYPLCAAYVDM 353 (354) Q Consensus 312 ~vp~~~~~~~~~-~~~~~~~~~~~~~~gGv-~i~~P~ai~y~D~ 353 (354) .+-..++..+-. .+.-.+.+-...|+++- .+..=.++..+-+ T Consensus 272 ~~~~~i~i~~~~~a~~~~~~~~~~~r~d~~~~~~~~~a~~~~~v 315 (315) T protein:vir:41 272 GFWRNIKVVPDYDAEMRLTKYVASLRTDNHYEDEEGAVSATITV 315 (315) T ss_pred EeccccEEEeeecCCCCceEEEEEEEeceeEEeccceeEeeeeC Confidence 444445554332 12223344445566553 3333334555556 No 93 >protein:vir:78640 Length: 352 # NCBI annotation: phage capsid # Family: family:all:658 # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429943;genbank:gi:156603997;genbank:GeneID:5525386 Probab=97.71 E-value=2.8e-06 Score=50.99 Aligned_cols=305 Identities=7% Similarity=-0.061 Sum_probs=150.1 Q ss_pred CcccccchHHhhhccceeecCccccc-------cccchhhhh--------hhhhhc-CCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRN-------GDQWVINNT--------ALDAIG-NPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--------amda~~-~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.++.+++..-+..-...-++..... +.+..+..+ .+.... ..++...+.+++.|++. +.+. T Consensus 23 ~~~d~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~al~~~~~~~gG~lIP--~~~~ 100 (352) T protein:vir:78 23 RQVQDIEEKEKAKVKDKGEAYQSLNDNEKLVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTLS 100 (352) T ss_pred HHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHhhhhHHHHHHhhHHHHHHHhccCCCCCCceecc--HhHH Confidence 11111111111111111101000000 000000000 000000 01222233445566776 5677 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) ++|++........|.+..+.+..+ .++ ..+....+.+.|++.. ..+|..+...+......+.++.-+.+|.+=|+ T Consensus 101 ~~Ii~~l~~~s~l~~~~~v~~~~~---~~~-p~~~~~~~~a~~v~E~-~~~~~~~~~f~~v~~~~~k~~~~i~is~ell~ 175 (352) T protein:vir:78 101 KEIVSEPFAKNQLREKARLTNIKG---LEI-PRVSYTLDDDDFITDV-ETAKELKLKGDTVKFTTNKFKVFAAISDTVIH 175 (352) T ss_pred HHHHHHHHhhcchhhheeeEecCC---ceE-EEEecCCCcccccccc-cccccccccceeeeecceeEEeechhhHHHHh Confidence 888887777777788777654332 121 1222234567788664 44677777778888888888888888877555 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheee-eeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAY-FGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f-~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....++++...+++.+| .|+....-.|+++++++...+..+ .+++|.+++..|... T Consensus 176 Ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~~~~~g~l~~~~~~~~t~~~---------~~d~i~~~~~~l~~~- 242 (352) T protein:vir:78 176 GS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGAN---------MYDAIINALADLHED- 242 (352) T ss_pred hh---hHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccceeccccccccccc---------hHHHHHHHHhccChh- Confidence 44 3467766777777788777777655 555555557888888766543222 256777777766432 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) +. ..-..+|++..+..|.+.. +..+..++ .+.+-++...|...+..-...-.|+-+. ..+.+ T Consensus 243 -~~-~~a~~~mn~~t~~~l~~~~--~~~~~~~~------------~~~~~~llG~PV~~~~~~~~~~~Gdf~~-~~~~~- 304 (352) T protein:vir:78 243 -YR-DNATIYMRYADYVKIISVL--SNGTTNFF------------DTPAEKVFGKPVVFTDAAVKPIVGDFNY-FGINY- 304 (352) T ss_pred -hh-cCCEEEEehHHHHHHHHHH--hccCCccc------------ccCCccccccceEEecCCCceeEeehhh-hhhhh- Confidence 21 2246888998887776543 22333222 1222233333333222110000011000 00000 Q ss_pred cCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +. +.+ .+++ +...-...+.+.+|++|. +.+|.||+.+.++ T Consensus 305 -~~--~~~---~~~~----~~~~g~~~f~~~~r~Dg~-~~~~eA~~~l~~~ 344 (352) T protein:vir:78 305 -DG--TTY---DTDK----DVKKGEYLFVLTAWYDQQ-RTLDSAFRIAKAK 344 (352) T ss_pred -hh--hee---eeec----cccCCeeEEEEEeeeCce-eechhheEEEEee Confidence 00 000 0111 111223556667888755 6779999999999 No 94 >protein:vir:9820 Length: 272 # NCBI annotation: putative major capsid/head protein # Family: family:all:522 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795582;genbank:gi:28876339;genbank:GeneID:1257858 Probab=97.69 E-value=2.9e-05 Score=45.49 Aligned_cols=263 Identities=6% Similarity=-0.039 Sum_probs=137.4 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCcc Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDL 115 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~di 115 (354) |- +.. +..++ .+.. +.+.+.+.+.....+....+.-+..... -...++..+.+...|.+.+++++ +++ T Consensus 1 MA---~~~-T~~~~----~~iP--ev~s~~v~~~~~~~~~~~~~~~~~~~~~g~~G~tv~iP~~~~~~~a~~v~eg-~~i 69 (272) T protein:vir:98 1 MA---VGT-TKMAQ----MLDP--EVLADMIDAEVGKAIRFAPLAEVDTTLEGQPGTTLTVPKWDYIGDAEDVAEG-EAI 69 (272) T ss_pred CC---Ccc-ccchh----eech--HHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEEEEecCCCCcccccCC-Ccc Confidence 11 111 12222 1222 2222333443333444444443322211 11236777888888999998875 578 Q ss_pred ceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCcccee Q lcl|NC_020082. 116 PRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSS 195 (354) Q Consensus 116 p~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~ 195 (354) |..+...+.....+..++..+.++..+.+. ...++...-.+.+.+.+++..|+.++.-. .|- + . T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~itd~~~~~---s~~d~~~~~~~~~~~~~a~~~d~~i~~~~-----~~a---~-----~ 133 (272) T protein:vir:98 70 PMTQLGFKKTTMTIKKAGKGVEITDEAILS---GYGDPVGQAAKQIVEAIDHKVDADVLDAL-----SKS---T-----Q 133 (272) T ss_pred cccccccceEEEEeeeeeeeeeecHHHHhh---ccccHHHHHHHHHHHHHHHHHHHHHHHHh-----ccc---c-----c Confidence 888888888888899988888887666544 35578888888999999998888766321 111 0 0 Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCC--chHHHHHHhcCceeecccccc Q lcl|NC_020082. 196 ATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTD--RTVMQHFMEANSYTLLTGNEL 273 (354) Q Consensus 196 ~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~--~Tvl~~l~~n~~~~~~~g~~l 273 (354) ..+.. .| +++|.+++..+-.. ...+..++|+|..|..|.+.......+ ..-.. ...+ |..- T Consensus 134 ~~~~~--~t----~d~i~da~~~l~~~---~~~~~~~vv~p~~~~~L~k~~~~~~~~~~~~~~~-~~~~-------g~ig 196 (272) T protein:vir:98 134 TVEAT--AT----VDGVSKALDIFNDE---DDAETVIVMNPADASTLRLDAAKEWLGATEVGAN-RVVS-------GVYG 196 (272) T ss_pred ccccc--cC----HHHHHHHHHHHhcc---CCCccEEEEcHHHHHHHHHhcccccccccccccc-cccc-------ccch Confidence 01111 12 56777777776532 245679999999999886432111111 00001 1111 2222 Q ss_pred eEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeee Q lcl|NC_020082. 274 DIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVD 352 (354) Q Consensus 274 ~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D 352 (354) ++...+.+....... ++ .+++ ++..+.+..-.+.+.-.- +.......+....++ |+.+.+|.+++.+- T Consensus 197 ~i~G~~Vi~s~~~p~------~t--~~~~--~~~a~~~~~~~~~~ve~~r~~~~~~~~i~~~~~~-~~~v~~~~~vv~~t 265 (272) T protein:vir:98 197 EVLGVQIVRSRKCPK------GT--AYMV--RKGALRIMLKRNTMVETDRDITKAINQIVANKHY-GVYLYKAEKAVKIT 265 (272) T ss_pred hhcCeeEEEcCCCCc------ce--EEEE--cCCeEEEEecCCceeeeccccccceeEEEEEEEE-EEEEEcCCceEEEE Confidence 344444444443211 11 1222 223333333222221111 112223444444444 58899999999998 Q ss_pred cC Q lcl|NC_020082. 353 MA 354 (354) Q Consensus 353 ~~ 354 (354) ++ T Consensus 266 ~~ 267 (272) T protein:vir:98 266 LK 267 (272) T ss_pred ec Confidence 88 No 95 >protein:vir:3033 Length: 272 # NCBI annotation: major capsid protein # Family: family:all:522 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438146;genbank:gi:16271809;genbank:GeneID:929235 Probab=97.69 E-value=2.9e-05 Score=45.49 Aligned_cols=263 Identities=6% Similarity=-0.039 Sum_probs=137.4 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCcc Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDL 115 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~di 115 (354) |- +.. +..++ .+.. +.+.+.+.+.....+....+.-+..... -...++..+.+...|.+.+++++ +++ T Consensus 1 MA---~~~-T~~~~----~~iP--ev~s~~v~~~~~~~~~~~~~~~~~~~~~g~~G~tv~iP~~~~~~~a~~v~eg-~~i 69 (272) T protein:vir:30 1 MA---VGT-TKMAQ----MLDP--EVLADMIDAEVGKAIRFAPLAEVDTTLEGQPGTTLTVPKWDYIGDAEDVAEG-EAI 69 (272) T ss_pred CC---Ccc-ccchh----eech--HHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEEEEecCCCCcccccCC-Ccc Confidence 11 111 12222 1222 2222333443333444444443322211 11236777888888999998875 578 Q ss_pred ceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCcccee Q lcl|NC_020082. 116 PRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSS 195 (354) Q Consensus 116 p~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~ 195 (354) |..+...+.....+..++..+.++..+.+. ...++...-.+.+.+.+++..|+.++.-. .|- + . T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~itd~~~~~---s~~d~~~~~~~~~~~~~a~~~d~~i~~~~-----~~a---~-----~ 133 (272) T protein:vir:30 70 PMTQLGFKKTTMTIKKAGKGVEITDEAILS---GYGDPVGQAAKQIVEAIDHKVDADVLDAL-----SKS---T-----Q 133 (272) T ss_pred cccccccceEEEEeeeeeeeeeecHHHHhh---ccccHHHHHHHHHHHHHHHHHHHHHHHHh-----ccc---c-----c Confidence 888888888888899988888887666544 35578888888999999998888766321 111 0 0 Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCC--chHHHHHHhcCceeecccccc Q lcl|NC_020082. 196 ATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTD--RTVMQHFMEANSYTLLTGNEL 273 (354) Q Consensus 196 ~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~--~Tvl~~l~~n~~~~~~~g~~l 273 (354) ..+.. .| +++|.+++..+-.. ...+..++|+|..|..|.+.......+ ..-.. ...+ |..- T Consensus 134 ~~~~~--~t----~d~i~da~~~l~~~---~~~~~~~vv~p~~~~~L~k~~~~~~~~~~~~~~~-~~~~-------g~ig 196 (272) T protein:vir:30 134 TVEAT--AT----VDGVSKALDIFNDE---DDAETVIVMNPADASTLRLDAAKEWLGATEVGAN-RVVS-------GVYG 196 (272) T ss_pred ccccc--cC----HHHHHHHHHHHhcc---CCCccEEEEcHHHHHHHHHhcccccccccccccc-cccc-------ccch Confidence 01111 12 56777777776532 245679999999999886432111111 00001 1111 2222 Q ss_pred eEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeee Q lcl|NC_020082. 274 DIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVD 352 (354) Q Consensus 274 ~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D 352 (354) ++...+.+....... ++ .+++ ++..+.+..-.+.+.-.- +.......+....++ |+.+.+|.+++.+- T Consensus 197 ~i~G~~Vi~s~~~p~------~t--~~~~--~~~a~~~~~~~~~~ve~~r~~~~~~~~i~~~~~~-~~~v~~~~~vv~~t 265 (272) T protein:vir:30 197 EVLGVQIVRSRKCPK------GT--AYMV--RKGALRIMLKRNTMVETDRDITKAINQIVANKHY-GVYLYKAEKAVKIT 265 (272) T ss_pred hhcCeeEEEcCCCCc------ce--EEEE--cCCeEEEEecCCceeeeccccccceeEEEEEEEE-EEEEEcCCceEEEE Confidence 344444444443211 11 1222 223333333222221111 112223444444444 58899999999998 Q ss_pred cC Q lcl|NC_020082. 353 MA 354 (354) Q Consensus 353 ~~ 354 (354) ++ T Consensus 266 ~~ 267 (272) T protein:vir:30 266 LK 267 (272) T ss_pred ec Confidence 88 No 96 >protein:vir:4997 Length: 397 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049971;genbank:gi:9632943;genbank:GeneID:1262106 Probab=97.68 E-value=6e-06 Score=49.21 Aligned_cols=307 Identities=8% Similarity=-0.023 Sum_probs=145.7 Q ss_pred CcccccchH----Hhhhccceee--cCccccc-----------cccchh--hhhhhhhhcCCccccchhhhhHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQ----TIQGNQWLVH--KGYVSRN-----------GDQWVI--NNTALDAIGNPNVMLDADGGIAFYISQLA 61 (354) Q Consensus 1 ~~~~~~~~~----~~~~~~~~~~--~~~~~~~-----------~~~~~~--~~~amda~~~~~~~~dA~~~~~fl~~~L~ 61 (354) ..++.++.+ .-........ +...... +..... ...+..+ ....+. +.+.++.. + T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~t~--~~gg~~iP--~ 123 (397) T protein:vir:49 51 MKRDLFKEQYTEARANEVANMSEEEKKPLTKNEEEVKANFVKDFKNLVRGRYQNLLDS---KTDGSG--SDAGLTIP--Q 123 (397) T ss_pred HHHHHHHHHHHHHHHhhhhcccccccccccchhhHHHHHHHHHHHHHhhcchhhHHHh---hhccCC--ccCcceec--H Confidence 000000000 0000000000 0000000 000000 0001111 111112 22334444 4 Q ss_pred HHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceee-eccceeEEEEEEEEeeeeec Q lcl|NC_020082. 62 GIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVA-QSAQMHTVPLGYAGNECHYT 139 (354) Q Consensus 62 ~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~-~~~~~~~~pv~~~~~~~~~~ 139 (354) .+...+++........++++.+.. .+.....+.+.... ..+.+.|++..+. +|..+ ...+......+.++.-+.+| T Consensus 124 ~~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~~~~v~~~~~k~~~~~~iS 201 (397) T protein:vir:49 124 DIRTAINTLVRQFDSLQEYVNVEN-VTTLTGSRVYEKWADITGLAKLDDEGGQ-IGQNDDPKLSLIRYAIKRYAGISTVT 201 (397) T ss_pred HHHHHHHHHHHhhhhHhhhcceee-ccCCcceEEEEeeccCCcceeeeccccc-cccccccceeeeEeeeeeeEeehhhH Confidence 456677777777777777665532 22233334444443 3466778876543 45443 34667777888888878887 Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 140 LDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSV 219 (354) Q Consensus 140 ~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l 219 (354) ..=|+.+ ..++..--....++++++.+|+.+++|+..... ..+ .. + +++|.+++.++ T Consensus 202 ~ell~ds---~~~l~~~i~~~l~~~~~~~~d~ail~G~g~~~~----------~~~-~~-----~----~d~i~~~~~~l 258 (397) T protein:vir:49 202 NSLLADS---AENILAWLSGWIAKKVVVTRNKAILEAIGTLPN----------KPT-LA-----K----WDDIIDLQAKV 258 (397) T ss_pred HHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHhccccccc----------ccc-cc-----C----HHHHHHHHHhh Confidence 6545433 457778888899999999999999999754211 111 11 1 46677777777 Q ss_pred HHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEE Q lcl|NC_020082. 220 INLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRY 299 (354) Q Consensus 220 ~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~ 299 (354) ... ...+..++|+|..|..|.+-. +..+.-++ ..++ ..+.+-+|...|.......... .+.+++. . T Consensus 259 ~~~---~~~~a~~v~n~~~~~~l~~lk--d~~g~~l~----~~~~---~~g~~~~l~G~pV~~~~~~~~~-~~~~~~~-~ 324 (397) T protein:vir:49 259 DPA---IKQTSLFLTNTSGFTALKKVK--NAMGDYLM----ERDV---KSPTGYSIDGFVVKEISDRFLP-NGTGGAM-P 324 (397) T ss_pred hhh---hcCCCEEEEcHHHHHHHHHhh--ccCCceee----cccc---cCCCCceecceeeEEecccccc-cccCCce-e Confidence 542 345679999999999997543 33332221 1011 1222334444443322111111 1112222 2 Q ss_pred EEEEcCcceEEEeeccchhcc--ccc---ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMANPIPFRML--APQ---MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~vp~~~~~~--~~~---~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+..-..+++. +.. ...-.....++.|++| .+++|.+|+++.++ T Consensus 325 ~~~gd~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~r~d~-~~~~~~a~~~~~~~ 383 (397) T protein:vir:49 325 LYFGDLKQAVTLFDRQHLSLLSTNIGGGAFETDTTKVRVIDRFDV-VSTDTEAFVPASFK 383 (397) T ss_pred EEEeeccceEEEEeecccEEEEeccccchhhcCeeeEEEEEeecc-EEecccceEEEEec Confidence 223221222222221222221 111 1112345567788765 57889999999998 No 97 >protein:vir:3613 Length: 272 # NCBI annotation: MHP # Family: family:all:522 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112699;genbank:gi:13786567;genbank:GeneID:921035 Probab=97.68 E-value=2.5e-05 Score=45.79 Aligned_cols=268 Identities=6% Similarity=-0.031 Sum_probs=132.2 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCC-ceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPE-YADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~-~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) |....+..+|-- ..|+ +.+-+.+.....+....+..+...+.. .-.++.++.+...|.+..++++ ++++.-. T Consensus 1 ma~~~T~~~d~i----iPev--~~~~v~~~~~~~~~~~~~~~~~~~l~g~~G~ti~iP~~~~~gda~~~~eg-~~i~~~~ 73 (272) T protein:vir:36 1 MSKQKTTLADLV----NPEV--LAPIVSYELNKALRFAPLAQVDTTLQGQPGNTLKFPAFTYIGDAADVAEG-GEISLDK 73 (272) T ss_pred CCCcceehhhhh----chHH--HHHHHHHHHHhhhhhccccccccccccCCCCEEEEeeeccCccccccCCC-CccChhh Confidence 222234444421 1211 122233333344444454444443221 2457888888888998887765 4678777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) .+.+.....+.+.+.+|.+ .|++..+ .+.++-..-...++..+++..|+-++-.-. | .+ ....+ T Consensus 74 lt~~~~~~~i~~~~k~~~v--tD~~~~~-~~~d~~~~~~~~~a~~~a~~~d~~i~~~l~-----~---~~---~~~~~-- 137 (272) T protein:vir:36 74 IGTTTKSVTIKKAAKGTEI--TDEAALS-GYGDPIGESNKQLGLSLANKVDDDLLSAAK-----T---TS---QTVST-- 137 (272) T ss_pred cCCcceeEeeehhhccccc--cHHHHhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHhc-----c---cc---ccccc-- Confidence 7788888888876665554 6666654 455566667777777888888876542111 1 11 01111 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeec Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRF 279 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~ 279 (354) .--+++|.+++..+-.. ...+..++|+|..|..|.+...-.....+..+-+..|+.+ -++...+ T Consensus 138 ------~~~~d~i~~A~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~~~~~~~~~~~~~~G~i-------g~~~G~~ 201 (272) T protein:vir:36 138 ------KANVDGVQAALDIFNDE---DAQAYVLIVNPKDAAKIRKDANAKNIGSEVGANALINGTY-------ADVLGAQ 201 (272) T ss_pred ------cccHHHHHHHHHHhhhc---CCCceEEEEcHHHHHHHhcccccccccccccccceeeecc-------ceecCee Confidence 11246777777776542 2357899999999999964321111110000001112111 1222333 Q ss_pred eeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 280 QLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 280 ~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+...... .++.....|-..+.-+.+....+++.-.- ......-.+... ...|+.+.+|.+++.+-.+ T Consensus 202 Vv~s~~~p------~~~~~~~~~~~~~gA~~~~~~~~~~vE~~R~~~~~~d~i~~~-~~y~~~v~~~~~vv~~t~~ 270 (272) T protein:vir:36 202 IVRSKKLA------EGSALMFKIVSNSPALKLVLKRGVQVETDRDIVTKTTVITAD-EHYAAYLYDLTKVVNITFT 270 (272) T ss_pred EEEeCCCC------CCceeEEEEEecccceeeeecCCcccccccchhhcCcEEEEE-EEEEEEEEcCccEEEEeec Confidence 33333221 11112222222222222222222221111 111112223233 3468999999999999988 No 98 >protein:vir:7409 Length: 408 # NCBI annotation: major structural protein # Family: family:all:21 # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839926;genbank:gi:30089896;genbank:GeneID:1260683 Probab=97.68 E-value=4.8e-06 Score=49.77 Aligned_cols=313 Identities=8% Similarity=-0.015 Sum_probs=145.0 Q ss_pred Cccc----ccchHHhhhccceeecCcc--ccccccchhhhh------------hhhhhcCCccccchhhhhHHHHHHHHH Q lcl|NC_020082. 1 MAIK----TIDAQTIQGNQWLVHKGYV--SRNGDQWVINNT------------ALDAIGNPNVMLDADGGIAFYISQLAG 62 (354) Q Consensus 1 ~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------------amda~~~~~~~~dA~~~~~fl~~~L~~ 62 (354) -.+. .++...-+...+....... ............ .+......++.....+.+.++.. +. T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~gg~~vP--~~ 131 (408) T protein:vir:74 54 VRRDALREQLVEAQAEQVVNMREEEKGPLNKSENELKDKFVKDFVNMVRNPMAFLNTVSSKTETSGSDSAAGLTIP--QD 131 (408) T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhhhhHHHHHHHHHHHHhcchhhhhhhhhhhhcccccCCCceeec--hh Confidence 0000 0111000000010000000 000000000000 00011111122222233344554 56 Q ss_pred HHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccC-ceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 63 IEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVT-MGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 63 id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G-~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~ 140 (354) +.+.|++........+.++.+.. .+.....+.+......+ .+.+++..+ .+|. .+...+......+.++....+|. T Consensus 132 ~~~~Ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~E~~-~~~~~~~~~~~~i~~~~~k~~~~~~iS~ 209 (408) T protein:vir:74 132 IRTMINTLVRQYDSLQQYVRVES-VSTSSGSRVYEKWTDVTPLKAMDEEDG-KIPDLDNPRLTIIKYLIKRYAGIITATN 209 (408) T ss_pred HhhHHHHHHhhhcchhhhcceee-ccCCcceEEEEeecCCccccccccccc-ccccccccceeeEEeeeeeEEeeehhHH Confidence 67888888888877888776542 22233344444444443 334555543 3453 34677888889999998888887 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) .=++. ...++..--....++++...+|+.+++|+....-. . .. .+. +++.+++.... T Consensus 210 ell~d---s~~~l~~~i~~~l~~~~~~~~d~~il~G~G~~~~~----------~-~~-----~~~----~~i~~~~~~~l 266 (408) T protein:vir:74 210 TLLKD---TAENILAWLSSWIAKKVVVTRNQAIIAAMGTVPKK----------P-TI-----ANF----DDVITMINTSV 266 (408) T ss_pred HHHhh---chHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc----------c-cc-----ccH----HHHHHHHHHhh Confidence 65543 34467778888899999999999999996542111 0 01 123 34444443221 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. .....-.++|+|..|..|.+-. +..|.-++ ..++ ..+.+-+|...|........+...+ .++..++ T Consensus 267 ~~--~~~~~a~~v~n~~~~~~l~~lk--d~~G~~l~----~~~~---~~~~~~~l~G~pV~~~~~~~~~~~~-~~~~~i~ 334 (408) T protein:vir:74 267 DP--AIIATSSLLTNQSGLNKLALVK--TAEGKYLL----EPDP---TKPNSYLIKGKQVIVVADRWLPNSG-STVYPLY 334 (408) T ss_pred hh--hhcCCCEEEEcHHHHHHHHHhh--cCCCceEe----ccCc---CCCCCceecceeeEEecCccccccc-CCcceEE Confidence 11 2223347899999999997533 33343222 1111 1222334444443332211111111 2222222 Q ss_pred EEEcCcceEEEee--ccchhcccccc-c--CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMAN--PIPFRMLAPQM-A--SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~v--p~~~~~~~~~~-~--~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+.. +.+.+.. ...+.+.+-.. . .-...+.++.|++| .+++|.+++.++++ T Consensus 335 ~gd~~-~~~~~~~~~~~~i~~~~~~~~~f~~~~~~~r~~~r~d~-~~~~~~a~~~~~~~ 391 (408) T protein:vir:74 335 YGDMS-QAITLFDRENMSLLPTNIGAGAFETDTTKIRVIDRFDV-KATDSEALVAGSFT 391 (408) T ss_pred EEehh-ccEEEEEecceEEEEeccccchhhcceeeEEEEEeeCc-EEecccceEEEEee Confidence 22222 2222221 11222222111 1 11345667788764 68889999999997 No 99 >protein:vir:81160 Length: 371 # NCBI annotation: major capsid protein # Family: family:all:21 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285811;genbank:gi:148747732;genbank:GeneID:5247203 Probab=97.64 E-value=1.6e-05 Score=46.92 Aligned_cols=308 Identities=7% Similarity=0.008 Sum_probs=146.5 Q ss_pred CcccccchHHh------h-hccceeecC----cccc------ccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTI------Q-GNQWLVHKG----YVSR------NGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~------~-~~~~~~~~~----~~~~------~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~i 63 (354) --|+.|+.+.= + ....+..+. .... .+-+..+.. -.++ +.+...+.+.++.. +.+ T Consensus 36 ~ei~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~a-----~~~~t~~~gg~~vP--~~~ 107 (371) T protein:vir:81 36 EEIVALQEKFDVAKELYEEQKQTIEDKEPLKPTVQVKENEVEAFVNHIRTR-FRNA-----MSEGSNQDGGYTVP--QDI 107 (371) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHH-HHHh-----hccCCCccCceeec--HhH Confidence 00111111100 0 000000000 0000 000000000 0111 11111222333444 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~~E 142 (354) .+.+++........+.++++.. .+...-.+.+......+.+.+++..+. +|. .+...+......+.++.-+.+|..= T Consensus 108 ~~~ii~~~~~~s~i~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~v~Eg~~-~~~~~~~~f~~i~~~~~k~~~~~~iS~el 185 (371) T protein:vir:81 108 QTRINELRESKDALQNLITVEP-VTTLSGSRVFKKRSQQTGFVEVAEGAA-IGEKATPQFTLLQYQVKKYAGFFRVTNEL 185 (371) T ss_pred HHHHHHHHHhhhhhhhhceeee-ccCCceeEEEEeecCCcceeeeccccc-cccccccceeeEEeeeeEEEEeehhhHHH Confidence 7788888888888888776543 222333344445555567788877643 553 4467788888999999888888776 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) ++.+. .+|..--....++++++.+|+.+++|+....-.|. .+. +++..++..... T Consensus 186 l~ds~---~~l~~~i~~~l~~a~~~~~~~~i~~g~g~~~~~~~-----------------~~~----~~i~~~~~~~l~- 240 (371) T protein:vir:81 186 LNDST---EAIVNTLVRWIGDESRVTRNGLIINVLNTKAKTAI-----------------ADL----DGLKQIINVQLD- 240 (371) T ss_pred Hhhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----------------ccH----HHHHHHHHhhcc- Confidence 65543 46777788888999999999999999764322221 122 333333322111 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccc--ccc-cccCcceEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELA--ANG-VSNSNKPRY 299 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~--~~g-~g~~g~d~~ 299 (354) ......-.++|+|..|..|.+.. +..+. ||-..++ ..+.+-++...|........ ... .+.+..... T Consensus 241 -~~~~~~a~~vmn~~~~~~L~~lk--d~~g~----~l~~~~~---~~~~~~~l~G~pV~~~~~~~~~~~~~~~~~~~~~~ 310 (371) T protein:vir:81 241 -PVFRSTSSVIVNQDAFNWLDTLK--DQNGQ----YLLQPSI---SSPTGRQLLGLPVVIVSNKVLANRVDGGTGAQFAP 310 (371) T ss_pred -hhhhcCCEEEEcHHHHHHHHHhh--ccCCC----eeeeccc---CCCCCceecceeEEEecccccCccccccccCCcce Confidence 12223458999999999986532 33332 1211111 11222233333333332211 000 011111112 Q ss_pred EEEEcCcceEEEeeccchhccccccc-----CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMANPIPFRMLAPQMA-----SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~vp~~~~~~~~~~~-----~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++|-+=.+.+.+.....++....... .=...+.++.+++ ..+++|.+|+.++++ T Consensus 311 i~~Gd~~~~~~~~~~~~~~i~~~~~~~~~f~~~~v~~~~~~r~d-~~~~~~~a~~~~~~~ 369 (371) T protein:vir:81 311 IIVGDLKEAVVMFDRQRTEIMSSNVAMDAFETDATLWRAIERMD-VKMRDDEAFVFGEVQ 369 (371) T ss_pred EEEEehhceEEEEeecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEEe Confidence 22221112222222222222211111 1134556677765 678889999999999 No 100 >protein:vir:9509 Length: 381 # NCBI annotation: hypothetical protein # Family: family:all:635 # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835556;genbank:gi:30043951;genbank:GeneID:1260537 Probab=97.51 E-value=5.4e-05 Score=44.00 Aligned_cols=308 Identities=10% Similarity=-0.062 Sum_probs=150.3 Q ss_pred Ccccccch-----------------HHhh-----------------------hccceeecCccccccccchhhhhhhhhh Q lcl|NC_020082. 1 MAIKTIDA-----------------QTIQ-----------------------GNQWLVHKGYVSRNGDQWVINNTALDAI 40 (354) Q Consensus 1 ~~~~~~~~-----------------~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~amda~ 40 (354) |.||..+. +..+ ++.+.-.++. +....+... +..+. T Consensus 1 m~ik~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~lt~~e~~---~~~~~ 76 (381) T protein:vir:95 1 MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKSA-QSLSANQRS---FFMDI 76 (381) T ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhccCc-ccccHHHHH---HHHHH Confidence 22222111 1000 1111111110 111111100 11111 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc-eee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP-RVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip-~v~ 119 (354) ....++.+.+++. +.+..+|++.....=..|+++.+..- +.. ......+..+.+.|++..+ .++ ..+ T Consensus 77 -----~~~~~~~gg~lvP--~~~~~~I~~~l~~~s~i~~~~~v~~~-~~~---~~i~~~~~~~~a~w~~e~~-~~~~~~~ 144 (381) T protein:vir:95 77 -----NKNVNYKEEKLLP--EETIDRIFEDLTTNHPLLADLGIKNA-GLR---LKFLKSETSGVAVWGKIYG-EIKGQLD 144 (381) T ss_pred -----hcccCCCCceecC--HHHHHHHHHHHHhhccceeheeeEec-Ccc---eEEEEecCCcceeeecccc-ccccccc Confidence 1112233445655 56677888876666566666665432 211 2344556677788877543 233 334 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecc-- Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSAT-- 197 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~-- 197 (354) ...+....+.+.++.-..++.+=|+.+ ..+++.--....+++++..+++.+++|+....-.||+++++......+ T Consensus 145 ~~f~~i~l~~~kl~~~~~is~elL~Ds---~~~ie~~i~~~la~~~a~~~~~a~i~G~G~~qP~Gil~~~~~~~~~~~g~ 221 (381) T protein:vir:95 145 AAFSEETAIQNKLTAFVVLPKDLNDFG---PAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTEGA 221 (381) T ss_pred ccceeeeecceeEEeechhhHHHhhcC---HHHHHHHHHHHHHHHHHHHhhheeEeccCCCCceeeeeccCccccccccc Confidence 566778888888887777776655543 447888888899999999999999999988888999998653221111 Q ss_pred -------ccccccCHHHHHHHHHHHHHHHHHHhCCcc----cccEEEeCHHHHHHHhhccCC-CCCCchHHHHHHhcCce Q lcl|NC_020082. 198 -------KDYKTMNGQELFNMLNAPIFSVINLSRRFH----VPNTALMFPDLWNQANNQLMT-GYTDRTVMQHFMEANSY 265 (354) Q Consensus 198 -------~~w~~~T~~ei~~di~~~~~~l~~~s~g~~----~p~~L~l~p~~~~~L~~~~~~-~~~~~Tvl~~l~~n~~~ 265 (354) ..+...++...++.+..++..+.....+.. +-..++|+|..+..+...... +. ++.+ T Consensus 222 ~~~~~~~~t~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~mn~~t~~~l~~~~~~~~~-----------~G~~ 290 (381) T protein:vir:95 222 YPEKEEQGTLTFANPRATVNELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNA-----------NGVY 290 (381) T ss_pred ccccccccccccccchhhHHHHHHHHHhhccccccccccccCceEEEEccccHHhhccccccCCC-----------CCce Confidence 112222334445555555555533222222 223678999887776432111 11 1111 Q ss_pred eecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCc--eeEEeeeeeeeeEEE Q lcl|NC_020082. 266 TLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASL--GITVPAEYKISGTEF 342 (354) Q Consensus 266 ~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~--~~~~~~~~~~gGv~i 342 (354) ...-+.+..|....... .|+ ++..+.+. +.+..-..+++-.- +.... ...+....|.+ ..+ T Consensus 291 v~~l~~g~~vv~s~~~p-----------~~~--iifgDfs~--Y~i~~r~~~~i~~~~~~~~~~d~~~f~a~~r~d-g~~ 354 (381) T protein:vir:95 291 VTALPFNLNVIESTVQE-----------AGK--VLTYVKGL--YDGYLAGGINVQKFKETLALDDMDLYTAKQFAY-GKA 354 (381) T ss_pred eecCCCCceEEecCCCC-----------cCc--EEEEeccc--EEEEEecccEEEeechhHhhcCCeEEEEEEEEc-CEE Confidence 11111222222111110 011 22222211 22222222222111 11111 23355566665 567 Q ss_pred ECcceeeeeecC Q lcl|NC_020082. 343 RYPLCAAYVDMA 354 (354) Q Consensus 343 ~~P~ai~y~D~~ 354 (354) +.|.|++++|++ T Consensus 355 ~~~~A~~v~~l~ 366 (381) T protein:vir:95 355 KDNKVAAVWKLD 366 (381) T ss_pred ecCceEEEEEEE Confidence 899999999998 No 101 >protein:vir:101291 Length: 381 # NCBI annotation: hypothetical protein # Family: family:all:635 # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908831;genbank:gi:118725095;genbank:GeneID:4555862 Probab=97.51 E-value=5.4e-05 Score=44.00 Aligned_cols=308 Identities=10% Similarity=-0.062 Sum_probs=150.3 Q ss_pred Ccccccch-----------------HHhh-----------------------hccceeecCccccccccchhhhhhhhhh Q lcl|NC_020082. 1 MAIKTIDA-----------------QTIQ-----------------------GNQWLVHKGYVSRNGDQWVINNTALDAI 40 (354) Q Consensus 1 ~~~~~~~~-----------------~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~amda~ 40 (354) |.||..+. +..+ ++.+.-.++. +....+... +..+. T Consensus 1 m~ik~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~lt~~e~~---~~~~~ 76 (381) T protein:vir:10 1 MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKSA-QSLSANQRS---FFMDI 76 (381) T ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhccCc-ccccHHHHH---HHHHH Confidence 22222111 1000 1111111110 111111100 11111 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc-eee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP-RVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip-~v~ 119 (354) ....++.+.+++. +.+..+|++.....=..|+++.+..- +.. ......+..+.+.|++..+ .++ ..+ T Consensus 77 -----~~~~~~~gg~lvP--~~~~~~I~~~l~~~s~i~~~~~v~~~-~~~---~~i~~~~~~~~a~w~~e~~-~~~~~~~ 144 (381) T protein:vir:10 77 -----NKNVNYKEEKLLP--EETIDRIFEDLTTNHPLLADLGIKNA-GLR---LKFLKSETSGVAVWGKIYG-EIKGQLD 144 (381) T ss_pred -----hcccCCCCceecC--HHHHHHHHHHHHhhccceeheeeEec-Ccc---eEEEEecCCcceeeecccc-ccccccc Confidence 1112233445655 56677888876666566666665432 211 2344556677788877543 233 334 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecc-- Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSAT-- 197 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~-- 197 (354) ...+....+.+.++.-..++.+=|+.+ ..+++.--....+++++..+++.+++|+....-.||+++++......+ T Consensus 145 ~~f~~i~l~~~kl~~~~~is~elL~Ds---~~~ie~~i~~~la~~~a~~~~~a~i~G~G~~qP~Gil~~~~~~~~~~~g~ 221 (381) T protein:vir:10 145 AAFSEETAIQNKLTAFVVLPKDLNDFG---PAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTEGA 221 (381) T ss_pred ccceeeeecceeEEeechhhHHHhhcC---HHHHHHHHHHHHHHHHHHHhhheeEeccCCCCceeeeeccCccccccccc Confidence 566778888888887777776655543 447888888899999999999999999988888999998653221111 Q ss_pred -------ccccccCHHHHHHHHHHHHHHHHHHhCCcc----cccEEEeCHHHHHHHhhccCC-CCCCchHHHHHHhcCce Q lcl|NC_020082. 198 -------KDYKTMNGQELFNMLNAPIFSVINLSRRFH----VPNTALMFPDLWNQANNQLMT-GYTDRTVMQHFMEANSY 265 (354) Q Consensus 198 -------~~w~~~T~~ei~~di~~~~~~l~~~s~g~~----~p~~L~l~p~~~~~L~~~~~~-~~~~~Tvl~~l~~n~~~ 265 (354) ..+...++...++.+..++..+.....+.. +-..++|+|..+..+...... +. ++.+ T Consensus 222 ~~~~~~~~t~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~mn~~t~~~l~~~~~~~~~-----------~G~~ 290 (381) T protein:vir:10 222 YPEKEEQGTLTFANPRATVNELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNA-----------NGVY 290 (381) T ss_pred ccccccccccccccchhhHHHHHHHHHhhccccccccccccCceEEEEccccHHhhccccccCCC-----------CCce Confidence 112222334445555555555533222222 223678999887776432111 11 1111 Q ss_pred eecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCc--eeEEeeeeeeeeEEE Q lcl|NC_020082. 266 TLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASL--GITVPAEYKISGTEF 342 (354) Q Consensus 266 ~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~--~~~~~~~~~~gGv~i 342 (354) ...-+.+..|....... .|+ ++..+.+. +.+..-..+++-.- +.... ...+....|.+ ..+ T Consensus 291 v~~l~~g~~vv~s~~~p-----------~~~--iifgDfs~--Y~i~~r~~~~i~~~~~~~~~~d~~~f~a~~r~d-g~~ 354 (381) T protein:vir:10 291 VTALPFNLNVIESTVQE-----------AGK--VLTYVKGL--YDGYLAGGINVQKFKETLALDDMDLYTAKQFAY-GKA 354 (381) T ss_pred eecCCCCceEEecCCCC-----------cCc--EEEEeccc--EEEEEecccEEEeechhHhhcCCeEEEEEEEEc-CEE Confidence 11111222222111110 011 22222211 22222222222111 11111 23355566665 567 Q ss_pred ECcceeeeeecC Q lcl|NC_020082. 343 RYPLCAAYVDMA 354 (354) Q Consensus 343 ~~P~ai~y~D~~ 354 (354) +.|.|++++|++ T Consensus 355 ~~~~A~~v~~l~ 366 (381) T protein:vir:10 355 KDNKVAAVWKLD 366 (381) T ss_pred ecCceEEEEEEE Confidence 899999999998 No 102 >protein:vir:95963 Length: 395 # NCBI annotation: ORF009 # Family: family:all:635 # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239802;genbank:gi:66395459;genbank:GeneID:5132880 Probab=97.45 E-value=6.5e-05 Score=43.55 Aligned_cols=307 Identities=9% Similarity=-0.028 Sum_probs=141.5 Q ss_pred Cc-----------------ccccc------hH-H----hhhccceeecCccccccccchhhhhhhhhhcCCccccchhhh Q lcl|NC_020082. 1 MA-----------------IKTID------AQ-T----IQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGG 52 (354) Q Consensus 1 ~~-----------------~~~~~------~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~ 52 (354) -+ ++.+. .. . ...++-...+|......++.. ..+++ .....+. T Consensus 23 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~r~~~~l~~ee~~----~~~~~-----~~~t~~~ 93 (395) T protein:vir:95 23 NLVQNGASDEEQSKAFGAMFDALSNDLQEEITAEINNRVVDNGILAKRSQDPLTSEERK----FFNDI-----NYDVGYT 93 (395) T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccchHHHH----HHHHH-----hhccCCC Confidence 00 00000 00 0 000000000111110000000 11111 1112233 Q ss_pred hHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEE Q lcl|NC_020082. 53 IAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYA 132 (354) Q Consensus 53 ~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~ 132 (354) +.+++. +.+..+|++.....-..|.++.+..-.+ ...+...+..+.+.|....+.--+..+..++....+.+.+ T Consensus 94 gG~liP--~~~~~~Ii~~l~~~s~i~~~~~v~~~~~----~~~i~~~~~~~~a~w~~e~~~~~~~~~~~f~~i~l~~~kl 167 (395) T protein:vir:95 94 DEKILP--ETVVERVFDDLQKDHPLLSKINFQNAGI----KTRVIKADPAGQAVWGKVFGEIKGQLDAAFREENFTQYKL 167 (395) T ss_pred Cceecc--HHHHHHHHHHHHhhhhhhhhceeEecCC----ceEEEEecCCcceEEeecccccCccccccceeeeeceeeE Confidence 345554 5567778877766666666666543222 1234556677778776543332233456667777888888 Q ss_pred EeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhC--ceeeeecCCccceeccccccccCHHHHHH Q lcl|NC_020082. 133 GNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRG--MYGLFNNPNVTLSSATKDYKTMNGQELFN 210 (354) Q Consensus 133 ~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~g--i~GLlN~p~~~~~~~~~~w~~~T~~ei~~ 210 (354) ..-..+|.+=|+.+ ..+++.--....++++++.+|+.+++|+...+ =.||+++...... ...|...+.....+ T Consensus 168 ~~~~~iS~ell~ds---~~~ie~~i~~~la~~ia~~~~~a~i~G~G~~~~qP~Gil~~~~~~~~--~~~~~~~~~~~t~~ 242 (395) T protein:vir:95 168 TCFVVLPDDLSTFG---PAWIERFVRTQIQEAISVALESAIINGGGAAKTQPVGLMKDVNTNSG--AVTDKASSGTLTFA 242 (395) T ss_pred EEeecccHHHHhcc---hhHHHHHHHHHHHHHHHHHHhhheeeccCCCCcCceeeeeccccccc--ccccccccchhhhh Confidence 88778876555443 55788889999999999999999999986542 4799998654322 22222222111122 Q ss_pred HHH-------HHHHHHHHHhCC----cccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEE--e Q lcl|NC_020082. 211 MLN-------APIFSVINLSRR----FHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQ--I 277 (354) Q Consensus 211 di~-------~~~~~l~~~s~g----~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~--~ 277 (354) ++. .++..+....++ ..+--+++|+|..+..+...+.- .- ..|.+.++- + T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~mn~~t~~~~~g~~~~----------~~-------~~G~~~~~lg~g 305 (395) T protein:vir:95 243 DADTTILELNDVLKNLSVDEKGKELKIDGKVALVVNPRDSWDVQARYTY----------LT-------ANGGFVTVLPYN 305 (395) T ss_pred hhHhhHHHHHHHHHhhccccccchhhhcCceEEEEcchhhhhcCCccee----------cc-------CCCcceeccCCc Confidence 222 222222111111 12234678888776655322110 00 012222221 2 Q ss_pred eceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccC--ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 278 RFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMAS--LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 278 ~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~--~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++...+.......+--+.-..++++++. .+.+.++. +... -...+....|++ ..++.|.|+++++|. T Consensus 306 ~~v~~~~~~p~~~i~fgdfs~y~i~~r~--------~~~i~~~~-~~~~~~d~~~f~~~~r~d-g~~~~~~A~~~l~i~ 374 (395) T protein:vir:95 306 VTIITSEFVPEGKLVAFVTDRYNAVRGG--------GLTVKKFD-QTLALEDAVLFTAKTFAY-GQPDDNKASAVYDLK 374 (395) T ss_pred ceEEEcCCCCCCcEEEEecccEEEEEec--------ceEEEecc-chhhhCCcEEEEEEEEEC-CEEeccccEEEEEee Confidence 2222222111100000000112222211 11122221 1111 134455677775 678899999999999 No 103 >protein:vir:80128 Length: 466 # NCBI annotation: Phage capsid protein # Family: family:all:635 # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425603;genbank:gi:155042936;genbank:GeneID:5469556 Probab=97.44 E-value=5.4e-05 Score=43.96 Aligned_cols=318 Identities=10% Similarity=0.019 Sum_probs=138.5 Q ss_pred Ccccccch---------HHhhhccceeecCccccc-----------------cccchhhhh--hhhhhcCCccccchhhh Q lcl|NC_020082. 1 MAIKTIDA---------QTIQGNQWLVHKGYVSRN-----------------GDQWVINNT--ALDAIGNPNVMLDADGG 52 (354) Q Consensus 1 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--amda~~~~~~~~dA~~~ 52 (354) --++.+.. ...++...-+..+.-.+. .+.. .... ..+.+ ....+.++ T Consensus 82 ~el~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~g 156 (466) T protein:vir:80 82 NELEQLNNKEPKNNSEPAQVSGARTQQFVGGETRMKGFFRNMPYEQRAALIARSEV-KEFLAQVRTLA----QQKRAVSG 156 (466) T ss_pred HHHHHHHHhhhccCchhHHHHhhhhhHHhhHHHHHHHHHHhhhhhhHHHHHHHHHH-HHHHHHHHHHh----hhhhhhcc Confidence 00000000 000111111111000000 0000 0000 00000 00111222 Q ss_pred hHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEE Q lcl|NC_020082. 53 IAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYA 132 (354) Q Consensus 53 ~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~ 132 (354) +..+.. +.+-.+|++.....-..+.++.+..-.+ ...+.+....+.+.|++.. .++|..+..++.....++.+ T Consensus 157 ~~~~vP--~~~~~~i~~~l~~~~~l~~~~~v~~~~g----~~~~~~~~~~~~a~wv~E~-~~~~~~~~~f~~i~~~~~k~ 229 (466) T protein:vir:80 157 AELTIP--DVMLELLRDNMHRYSKLISKVRLRPLKG----TARQNIAGAIPEGVWTEAV-ANLNELSLSFSQIEVDGYKV 229 (466) T ss_pred cccccc--HHHHHHHHHhhhhhhhhhhheeeeecCc----eeEeeeecCCcceeecccc-cccccccccccceeecceee Confidence 323333 2344455554444333444443332211 1223333444556777654 45677777788888899999 Q ss_pred EeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecc-----ccccccC--- Q lcl|NC_020082. 133 GNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSAT-----KDYKTMN--- 204 (354) Q Consensus 133 ~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~-----~~w~~~T--- 204 (354) +.-+.+|.+=|+.+ ..++..--....+.++...+|+.+++|+....-.|+||..+....... +.+...+ T Consensus 230 ~~~~~iS~ell~ds---~~~l~~~i~~~la~~~~~~~~~ail~G~G~~~P~Gil~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (466) T protein:vir:80 230 GGFIPIPNSTLEDS---DLNLADEILDAIGQAIGFALDKAILYGTGTKMPVGIVTRLAQTTQPPNWGTKAPAWTNLSTTN 306 (466) T ss_pred eeehhhhHHHHhcc---hHHHHHHHHHHHHHHHHHHHhhheeeccCCCCcceeeecccccccccccccccccccccchhh Confidence 88888887766644 447888888899999999999999999887777899998754322111 1121111 Q ss_pred ----------HHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccce Q lcl|NC_020082. 205 ----------GQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELD 274 (354) Q Consensus 205 ----------~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~ 274 (354) +...+.++...+..+.. +...+....++++..+..|.........+. .++-.. .++.+ T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~w~~~~~~~~~l~~~~~~~~~~g---~~~~~~-----~~~~~-- 374 (466) T protein:vir:80 307 LLKIDPTGKSAEEFFSELVLKLSKARA--NYSNGMKFWAMSSNTHAVLMSKAITFNSAG---ALVASL-----NNTMP-- 374 (466) T ss_pred hhhhhhhccchhhHHHHHHHHHHhhhc--cccCCceeEEecchhHHHhhcccccccCCc---cccccC-----CCccc-- Confidence 11222232222222111 122333345677787777754432211111 011000 01111 Q ss_pred EEeeceeeeccccccc-cccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeec Q lcl|NC_020082. 275 IQIRFQLDAAELAANG-VSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDM 353 (354) Q Consensus 275 I~~~~~L~~~~~~~~g-~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~ 353 (354) |...|...+....... .+...+. ++++++ .-+.+..-....+ .++ ...+....|++ ..+++|.+|+++|+ T Consensus 375 i~G~pvv~s~~~~~~~~~~g~~~~-y~i~~r--~~~~i~~~~~~~f----~~d-~~~~r~~~r~d-g~~~~~~afv~~~~ 445 (466) T protein:vir:80 375 IVGGDIVILDFIPDNDIIGGYGSL-YLLAER--ADIKLAQSEHVRF----IED-QTVFKGTARYD-GKPVFGEGFVAVNI 445 (466) T ss_pred ccccceeecCccCccceeeecccc-EEEEee--cceEEEechhhhh----hcC-cEEEEEEEEEc-cEEeccCceEEEEe Confidence 1111222111110000 0001111 222221 1222221111010 122 24466678775 56689999999999 Q ss_pred C Q lcl|NC_020082. 354 A 354 (354) Q Consensus 354 ~ 354 (354) + T Consensus 446 ~ 446 (466) T protein:vir:80 446 A 446 (466) T ss_pred c Confidence 9 No 104 >protein:vir:80930 Length: 278 # NCBI annotation: Cps # Family: family:all:522 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468392;genbank:gi:157324966;genbank:GeneID:5601363 Probab=97.41 E-value=7.4e-05 Score=43.23 Aligned_cols=272 Identities=7% Similarity=-0.054 Sum_probs=137.9 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQ 113 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~ 113 (354) || + ..+..++ .+.. |.+.+.+.+.....+....+..+...+. ..-.++.++.+...|.++.+.+. + T Consensus 1 Ma-----~-~~T~~~~----~iiP--ev~s~~v~~~~~~~~v~~~~~~~~~~l~g~~G~tv~ip~~~~~g~a~~~~~g-~ 67 (278) T protein:vir:80 1 MA-----D-LTTKLAN----LIDP--EVMGPMISAKLPKAIKFGKIAPIDNSLEGQPGSEITVPKYKYIGDAQDVAEG-A 67 (278) T ss_pred CC-----C-cceehhh----eecH--HHHHHHHHHHHHHhhhhcccceecccccCCCCCEEEEeeeccCCcceeecCC-C Confidence 11 1 1122222 1122 2223333444444444444444333221 12356788888888988887765 4 Q ss_pred ccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc Q lcl|NC_020082. 114 DLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL 193 (354) Q Consensus 114 dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~ 193 (354) +++..+...+.....+...+.+|. ..|++..+ .+.++-..-...++..+++..|+.++....+. .+. T Consensus 68 ~i~~~~lt~~~~~~~i~~~~~a~~--v~D~~~~~-~~~d~~~~~~~~~a~~~a~~~d~~l~~~l~~a-----~~~----- 134 (278) T protein:vir:80 68 AIDYSALETESVKHGIKKAGKGVK--LTDESVLS-GYGDPVEEAQKQIRMAIASKVDNDILEEALTT-----TLE----- 134 (278) T ss_pred cCcccccccceeeEeeehhhcccc--ccHHHHhh-ccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccc----- Confidence 677777777777788877666554 46665554 46677788889999999999998877543321 111 Q ss_pred eeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHH-HHHHhcCceeeccccc Q lcl|NC_020082. 194 SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVM-QHFMEANSYTLLTGNE 272 (354) Q Consensus 194 ~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl-~~l~~n~~~~~~~g~~ 272 (354) .+......+.+..++.+.++..++... +...+..|+|+|..|..|.+.........+-+ +=+..+ |.- T Consensus 135 --~~~~~t~~~~~~~~~~~~da~~~l~~~--~~~~~~~ivv~p~~~~~L~k~~~~~~~~~~~~g~~~~~~-------G~i 203 (278) T protein:vir:80 135 --VKGAINIGLIDKIENTFTDAPDAIEDE--SITTTGVLFLNYKDTAKLREEAAGSWTKASQLGDDLLVK-------GAF 203 (278) T ss_pred --cccccccchhhhHHHHHHHHHHhhccc--CCCcccEEEECHHHHHHHHhhhhhhccccccccccceee-------ccc Confidence 111111223455677777777766432 34445679999999998864311111111000 001111 222 Q ss_pred ceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeee Q lcl|NC_020082. 273 LDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYV 351 (354) Q Consensus 273 l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~ 351 (354) -++...+.+....+. .++ .+++. +.-+.+....+.+.-.- .+......+.... ..|+-+.+|.+++.+ T Consensus 204 g~~~G~~Vi~s~~~p------~~t--~~l~~--~gAi~~~~~~~~~vE~~Rd~~~~~d~i~~~~-~yg~~v~~~~~~v~i 272 (278) T protein:vir:80 204 GELLGWEIVRTKKLA------DGN--ALAVK--AGALKTFLKRNLLAESGRDMDHKLTKFNADQ-HYAVALVDETKAVKV 272 (278) T ss_pred eeecceeEEEcCCCC------cce--EEEEe--ccceeeeecCCcccccccchhhccceeeeee-EEEEEEEcCcceEEE Confidence 223333333333221 111 12222 22333333333322111 0111222332233 347999999999999 Q ss_pred ecC Q lcl|NC_020082. 352 DMA 354 (354) Q Consensus 352 D~~ 354 (354) -.+ T Consensus 273 t~~ 275 (278) T protein:vir:80 273 VPV 275 (278) T ss_pred eec Confidence 888 No 105 >protein:vir:4511 Length: 409 # NCBI annotation: capsid # Family: family:all:21 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599037;genbank:gi:19548995;genbank:GeneID:935211 Probab=97.41 E-value=3.9e-05 Score=44.76 Aligned_cols=320 Identities=12% Similarity=0.038 Sum_probs=149.3 Q ss_pred Ccccccch-------------HHhhhcccee----e---------------cCcccc-ccccchhhhhhhhhhcCCcccc Q lcl|NC_020082. 1 MAIKTIDA-------------QTIQGNQWLV----H---------------KGYVSR-NGDQWVINNTALDAIGNPNVML 47 (354) Q Consensus 1 ~~~~~~~~-------------~~~~~~~~~~----~---------------~~~~~~-~~~~~~~~~~amda~~~~~~~~ 47 (354) --++.||. ..++...... . ..++.. .........-++.........+ T Consensus 42 ~e~~~l~~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~e~~~~~~~~a~~~~~ 121 (409) T protein:vir:45 42 SELEALDERIAREEELRRQDQAYIESNEEEQRQNLDPENNSQQDEKRAQVFDKWMRHGASELTSEERKALRELRAQGVAQ 121 (409) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCcchhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHhhccCcc Confidence 00000000 0000000000 0 000000 0000000000111111111122 Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc-CceeEecCCCCccceeeeccceeE Q lcl|NC_020082. 48 DADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV-TMGKFIGANGQDLPRVAQSAQMHT 126 (354) Q Consensus 48 dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~-G~a~~~~~~~~dip~v~~~~~~~~ 126 (354) + ..+.+++. +.+..+|++.....-..+.++.+.+-.+ ...+.+...+.. ..+.+++.... .|..+....... T Consensus 122 ~--~~gg~liP--~~~~~~ii~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~E~~~-~~~~~~~f~~~~ 194 (409) T protein:vir:45 122 D--EKGGYTVP--ETFLAKVVEKMKSYGGIASVAQILTTSD--GRTMEWATADGTSEVGVLLGENEE-AGEEDTDFGMGS 194 (409) T ss_pred C--cCCceecc--HhHHHHHHHHHHhhhhhhhhceeeecCC--CceEEEEeeccCcccccccccccc-ccccccccceee Confidence 2 22345554 4466778887777777777665543222 122334444433 33456655443 566666665555 Q ss_pred EEEEEEE-eeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh---hCceeeeecCCccceeccccccc Q lcl|NC_020082. 127 VPLGYAG-NECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS---RGMYGLFNNPNVTLSSATKDYKT 202 (354) Q Consensus 127 ~pv~~~~-~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~---~gi~GLlN~p~~~~~~~~~~w~~ 202 (354) ...+... .-..+|.+=++.+ ..++..--....+.++...+|+.+++|+.. .+..|+++.+.....+..++ . T Consensus 195 l~~~k~~~~~i~is~ell~ds---~~~l~~~i~~~la~a~~~~~~~a~l~G~G~~~~~~p~Gil~~~~~~~~~~~~~--~ 269 (409) T protein:vir:45 195 LGALKMTSKIIRVSNELLQDS---AIDMEAYLARRIAERIGRGEARYLIQGTGAGTPKQPKGLAASVTGTTQTAAAN--A 269 (409) T ss_pred eeeeeeeeeehhhhHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccceeeecccccccccccc--c Confidence 5444443 3345665544443 346777778888999999999999999854 36789998876432222211 1 Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCccccc-EEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 203 MNGQELFNMLNAPIFSVINLSRRFHVPN-TALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 203 ~T~~ei~~di~~~~~~l~~~s~g~~~p~-~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) .| +++|.+++..|... +...+. .+++++..|..|.+- .+..+.-+++ ..+ ..+.+-++...|.+ T Consensus 270 ~~----~d~i~~l~~~l~~~--~~~~a~~~~~~n~~~~~~l~~l--kd~~G~~i~~----~~~---~~~~~~~l~G~PV~ 334 (409) T protein:vir:45 270 VK----WQEILALKHSIDPA--YRRGPKFRLAFNDNTLKLISEM--EDGQGRPLWL----PDI---VGVAPASVLNVPYV 334 (409) T ss_pred cc----hHHHHHHHHhhhhh--hccCCeEEEEECHHHHHHHHHh--hcCCCceeec----cCc---CCCCCceecceeeE Confidence 12 46677777776542 333333 467899999888642 2444432221 111 12333345555555 Q ss_pred eeccccccccccCcceEEEEE-EcCcceEEEeeccchhc--ccccc-cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 282 DAAELAANGVSNSNKPRYMVY-DKSDRNLAMANPIPFRM--LAPQM-ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 282 ~~~~~~~~g~g~~g~d~~v~y-~~d~~~~~~~vp~~~~~--~~~~~-~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ........ + .|.+. |+| +.+ +.+ +..-..++. ..... ..-...+.+..|++ ..+..|.||+.+.++ T Consensus 335 ~~~~~p~~--~-~~~~~-i~~Gd~~-~~~-i~~~~~~~~~~~~d~~~~~~~~~~~~~~r~d-~~~~~~~A~~~l~~k 404 (409) T protein:vir:45 335 IDQEIDDI--G-AGKKF-MFCGDFD-RFI-IRRVRYMILKRLVERYAEYDQTGFLAFHRFD-CILEDTSAIKALVGK 404 (409) T ss_pred EecCcCCc--c-CCccE-EEEeehh-hhh-eeeccceEEEEeecccccCCcEEEEEEEEec-cEeechhheEEEEec Confidence 54433221 1 23332 333 222 111 111112111 11111 11223456677775 569999999999997 No 106 >protein:vir:95376 Length: 425 # NCBI annotation: phage major capsid protein # Family: family:all:635 # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764476;genbank:gi:115334630;genbank:GeneID:5179263 Probab=97.23 E-value=0.00012 Score=42.02 Aligned_cols=314 Identities=11% Similarity=0.008 Sum_probs=145.8 Q ss_pred Cc--------------ccccchHHhh--------hccceeecC-------ccccccccchhhhh--hhhhhcCCccccch Q lcl|NC_020082. 1 MA--------------IKTIDAQTIQ--------GNQWLVHKG-------YVSRNGDQWVINNT--ALDAIGNPNVMLDA 49 (354) Q Consensus 1 ~~--------------~~~~~~~~~~--------~~~~~~~~~-------~~~~~~~~~~~~~~--amda~~~~~~~~dA 49 (354) -. ++.+..+... +..+-.... .+. .......... ..+++ ....+ T Consensus 68 ~~~~~le~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~-- 142 (425) T protein:vir:95 68 EKKSKLEGEIAQLEDELEQINSKQPSNQSRQKMQGSKGDVVEMNRLQVREMLK-TGEYYKRSEVVEFYEKF--RNLRA-- 142 (425) T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccchhhhhhhhhhhhhHHHHHHHHHHHHHh-hhhhhhhhHHHHHHHHH--Hhhcc-- Confidence 00 1111111000 000000000 000 0000000000 00110 01111 Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeee-ccceeEEE Q lcl|NC_020082. 50 DGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQ-SAQMHTVP 128 (354) Q Consensus 50 ~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~-~~~~~~~p 128 (354) .+++.+++. +.+.+.|++.....-..+.++.+.. .+ + ...+.+....+.+.|++..+. +|..+. ..+..... T Consensus 143 ~~~gg~~vP--~~~~~~Ii~~l~~~~~i~~~~~~~~-~~-g--~~~ip~~~~~~~a~~v~E~~~-~~~~~~~~f~~i~l~ 215 (425) T protein:vir:95 143 VAGGELTIP--EVVVNRIMDIMGDYTTLYPLVDKIR-VK-G--TTRILVDTDTSPATWIEQSGA-LPTGDVGTIASIDFD 215 (425) T ss_pred cccCceecc--HHHHHHHHHHHHhhhhHHHhhceee-cC-c--eeEEEEecCCccccccccccc-cccccccccceeeee Confidence 223445555 4567778877666666666665443 22 2 234455666777888877654 565554 36777788 Q ss_pred EEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhh--CceeeeecCCccceeccccccccCHH Q lcl|NC_020082. 129 LGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSR--GMYGLFNNPNVTLSSATKDYKTMNGQ 206 (354) Q Consensus 129 v~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~--gi~GLlN~p~~~~~~~~~~w~~~T~~ 206 (354) .+.++.-+.+|.+=|+.+. .+++.--....+.++++.+|+.+++|+... .-.|+++.-.... ..+..+.+ T Consensus 216 ~~k~~~~~~iS~ell~ds~---~~l~~~i~~~l~~~i~~~~d~~il~G~G~~~~~p~Gil~~~~~~~--~~~~~~~~--- 287 (425) T protein:vir:95 216 GFKVGKVTFVDNYLLQDSI---INLDDYVTKKIARAIAKALDLAIVKGTGAANKQPLGIIPSLPPEN--QVTVEADN--- 287 (425) T ss_pred heeeeeeehhhHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccceeeccccccc--cccccccc--- Confidence 8888888888876555543 367888888999999999999999998643 3468887632211 11112111 Q ss_pred HHHHHHHHHHHHHHHHhCCcccccEEEeCHHHH-HHHhhc-cCCCCCCchHHHHHHhcCceeecccccceEEeeceeeec Q lcl|NC_020082. 207 ELFNMLNAPIFSVINLSRRFHVPNTALMFPDLW-NQANNQ-LMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAA 284 (354) Q Consensus 207 ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~-~~L~~~-~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~ 284 (354) ..++++.+++..+.... ........+|++..| ..|..- ..-+..|. ||-. ...+..-++...|.+.+. T Consensus 288 ~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~l~~l~~~kd~~g~----~i~~-----~~~~~~~~l~G~pvv~~~ 357 (425) T protein:vir:95 288 NLLKNLVKQIGLIDTGD-DSVGEIVAVMKRSTYYNRLVEFSIQVDSNGN----VVGK-----LPNLRTPDLLGLRVVFNN 357 (425) T ss_pred chHHHHHHHHHhhhhhc-cccCceEEEEeChHHHHHHHHHHhhcCCCCc----eeec-----cCCCCCccccceeeEEcC Confidence 13567777776654321 112333567777754 434321 11233332 1111 011222234444544433 Q ss_pred cccccccccCcceEEEEEEcCcceEEEeeccchhccccccc--CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 285 ELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMA--SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 285 ~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~--~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ........-+.-..+++.+ ...+.+.+ .. +.. .-...+.++.|+. ..+++|.|++++++. T Consensus 358 ~~~~~~i~~Gd~~~~~~~~--~~~~~i~~------~~-~~~f~~~~~~~~~~~r~d-~~~~~~~a~~~~~i~ 419 (425) T protein:vir:95 358 FLDDDTVLFGEFEQYTLVE--RENITIDS------ST-HVKFTEDQTAFRGKGRFD-GKPVKPEAFVLVTIT 419 (425) T ss_pred cCCCccEEEEecccEEEEe--ecceEEEe------ec-ccccccCceEEEEEEeeC-cEeecccceEEEEec Confidence 2211110000000011111 11122211 11 111 1123444556664 688999999999999 No 107 >protein:vir:100172 Length: 394 # NCBI annotation: putative major head protein # Family: family:all:21 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025031;genbank:gi:48697264;genbank:GeneID:2948270 Probab=97.23 E-value=0.00012 Score=42.08 Aligned_cols=310 Identities=7% Similarity=-0.011 Sum_probs=143.0 Q ss_pred CcccccchH---------Hhh-hccceeecCccc-----cccccchhhhh-hhhhhcCCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQ---------TIQ-GNQWLVHKGYVS-----RNGDQWVINNT-ALDAIGNPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~---------~~~-~~~~~~~~~~~~-----~~~~~~~~~~~-amda~~~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.|+.++.+ ... +..+...+.... ..+..+..... ..+.+.+ ..++ +.+.+++. +.+. T Consensus 55 ~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~t~--~~gg~~vP--~~~~ 128 (394) T protein:vir:10 55 DQIKDLEAENKANSDPDKPVDNAQPNGTDLKKKPIDAKKKAINDFIHSHGKVIDNAAG--HVTS--TEAGVLIP--EEII 128 (394) T ss_pred HHHHHHHHHHHhhcchhhhhhhhcccccchhhhHHHHHHHHHHHHHhccchhhhhhhc--cccc--ccCceecc--HHHH Confidence 011111000 000 000000000000 00000000000 0111111 1122 22334554 5677 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTLDE 142 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~~E 142 (354) +.|++........+.++.+... +. .+..+.... ..+.+.+++..+. .|- -+...+.....++.++.-..+|.+= T Consensus 129 ~~ii~~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~v~l~~~k~~~~~~iS~el 204 (394) T protein:vir:10 129 YDPTAEVNSVVDLSTLVTKTPV-TT--PKGTYPILKRATDRFSSVAELAE-NPALAEPEFEQVDWSVSTYRGAIPLSEEA 204 (394) T ss_pred HHHHHHHHhhhhhhhhceeeec-cC--CceEEEEEecCCCcccccccccc-ccccccccceeEEeeeeeeEeeehhHHHH Confidence 8888888887777777664321 21 233444443 3466677777544 343 3456777888888888888888776 Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 143 MRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 143 l~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) |+.+ ..++..--....+++++..+|+.+++|.......+. .+ ..+ +++|.+++...... T Consensus 205 l~ds---~~~l~~~i~~~la~~~~~~~~~~il~g~g~~~~~~~----------~~----~~~----~d~l~~~~~~~~~~ 263 (394) T protein:vir:10 205 IADS---AVDLTSLVGQSINEKSVNTYNAMIAPVLQSFTAKAT----------TT----DTL----VDSLKHILNVDLDP 263 (394) T ss_pred Hhhh---hHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc----------cc----ccc----HHHHHHHHHhhhhh Confidence 6654 346777788888999999999999888753211110 01 112 34455544433221 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVY 302 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y 302 (354) .+ .-.++|+|+.|..|.+- .+..|.-++.--..+. ...+.+-.+...|.......... ...| +-.++| T Consensus 264 -~~---~a~~vmn~~~~~~l~~l--kd~~G~~i~~~~~~~~---~~~~~~~~L~G~PV~~~~~~~~~--~~~~-~~~i~~ 331 (394) T protein:vir:10 264 -AY---SRALVVTQSLFNTLDTL--KDKNGRYLLHDASDSI---TDGTAKGTVLGVPVYVVGDALLG--SAAG-DQKAFV 331 (394) T ss_pred -hc---cCEEEecHHHHHHHHHh--hccCCCeeeecccccc---ccCCcccccccceeEEecccccC--CCCC-ceEEEE Confidence 11 24799999999999753 2434432221100000 01122223444443322211111 1112 222333 Q ss_pred EcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 303 DKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 303 ~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) -+=.+.+.+..-..++............+..+.|++ +.+++|.+|+++.++ T Consensus 332 gd~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~d-~~~~~~~ai~~~~~~ 382 (394) T protein:vir:10 332 GDLKRGVLFADRQQVTLAWEDSKIYGRYLGAAFRFG-VKQADSNAGYFVTNT 382 (394) T ss_pred eeccccEEEEeecceEEEEecccccceeEEEEEEec-cEEeccccEEEEEee Confidence 211222323222333332222222223345667776 577779999999988 No 108 >protein:vir:78350 Length: 383 # NCBI annotation: Cps # Family: family:all:635 # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468644;genbank:gi:157325222;genbank:GeneID:5601696 Probab=97.13 E-value=0.00011 Score=42.32 Aligned_cols=308 Identities=9% Similarity=-0.000 Sum_probs=138.8 Q ss_pred CcccccchHHhh----------hccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 1 MAIKTIDAQTIQ----------GNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYET 70 (354) Q Consensus 1 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~ 70 (354) ..++.++.+..+ ..+...-+| .+....+... +.++. ...+.+.+.+++. +.+..+|++. T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~lt~~e~~---~~~~~-----~~~~~~~gg~lvP--~~~~~~I~~~ 106 (383) T protein:vir:78 38 EMVDAMAADIMEQAKKEARQEADAYISASRT-DKNITNEEIK---FFNDI-----NKEVGYKEETLLP--QTVVDEIFED 106 (383) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hhhhhHHHHH---HHHHH-----hccCCCCCccccC--HHHHHHHHHH Confidence 001111111100 111111111 1111111111 22222 1122333445665 4566677776 Q ss_pred hhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccc-eeeeccceeEEEEEEEEeeeeecHHHHHHHHHh Q lcl|NC_020082. 71 PYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLP-RVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAM 149 (354) Q Consensus 71 ~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip-~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~ 149 (354) ....=..|.++.+.+ .+. . ..+...+..+.+.|++..+. ++ ..+..++....+.+.++.-..++.+=|+.+ T Consensus 107 l~~~s~l~~~~~v~~-~~~--~-~~i~~~~~~~~a~w~~e~~~-~~~~~~~~f~~i~l~~~kl~~~i~is~ell~Ds--- 178 (383) T protein:vir:78 107 LTTEHPFLASIGMRT-TGL--R-TKFLKSETSGVAVWGKIFGE-IKGQLDATFSDEESIQNKLTAFVVVPKDLEKFG--- 178 (383) T ss_pred HHhhccceeeeeeEe-cCC--c-eEEEEEcCCcceEEeecccc-cccccCcceeeEeecceeeEeeccchHHHhhcc--- Confidence 655545555555433 221 1 23455666677778765432 33 335566777888888887777776555544 Q ss_pred CCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceec---cccccccCHHHHHHHHHHHH---HHHHHHh Q lcl|NC_020082. 150 NMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSA---TKDYKTMNGQELFNMLNAPI---FSVINLS 223 (354) Q Consensus 150 g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~---~~~w~~~T~~ei~~di~~~~---~~l~~~s 223 (354) ..+++.--....+++++..+|+.+++|+...+-.||+++.+...... ..+|. ++..--..|+...+ ..+.+.- T Consensus 179 ~~~ie~~i~~~l~~~~a~~~~~a~i~G~G~~qP~Gil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 257 (383) T protein:vir:78 179 PAWVKRFVVTQIEEAFAVALESAYIVGDGNDKPIGLNRKVGKGSTVVDGVYAEKA-ATGTLTFANPKTTVNELTDVYKYH 257 (383) T ss_pred HHHHHHHHHHHHHHHHHHHHhhheEeccCCCCceeeeeccCCccccccccccccc-ccchhhhhhhHHHHHHHHHHHhcc Confidence 44788888999999999999999999998778899998765322111 11222 11111122222222 2222111 Q ss_pred ----CC----cccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCc Q lcl|NC_020082. 224 ----RR----FHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSN 295 (354) Q Consensus 224 ----~g----~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g 295 (354) ++ ..+..+.++.|..|..+...... ...++.+...-+.++.|. ++.... .+ T Consensus 258 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----------~~~~G~~~t~l~~~~~iv-----~s~~~p------~~ 316 (383) T protein:vir:78 258 SVKENGHPLNVAGKVTLLVNPTDAWDVKKQYTS----------LNANGVYVTALPFNLNII-----ESLFVP------EK 316 (383) T ss_pred chhcccchhhhcCceEEEEcCcchhhhccchhc----------cCCCCceeeecCCCceEE-----ecCCCC------cc Confidence 11 01123456777554433211100 001111111112222222 111110 01 Q ss_pred ceEEEEEEcCcceEEEeeccchhcccc-cccCc--eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 296 KPRYMVYDKSDRNLAMANPIPFRMLAP-QMASL--GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 296 ~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~--~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) + ++..+.+ .+.+..-..++.-.- +.... ..-+....|.+| .++.|.|++.+||+ T Consensus 317 ~--iifgdfs--~Y~i~~r~~~~i~~~~~~~f~~d~~~f~~~~r~dG-~~~~~~A~~vl~~~ 373 (383) T protein:vir:78 317 K--AISYVAE--RYDALIGGPLDIGTYDQTLAIEDLNLYAAKQFAYG-KAKDDKAAAVWTLN 373 (383) T ss_pred c--EEEeecc--ceEEEecccceEEecchhhhhcCceEEEEEEEEcC-EEecCCeEEEEEEE Confidence 1 1111111 122222222222111 11111 233445666654 78899999999999 No 109 >protein:vir:100884 Length: 389 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358764;genbank:gi:78000028;genbank:GeneID:3726155 Probab=97.10 E-value=0.00017 Score=41.31 Aligned_cols=309 Identities=8% Similarity=-0.013 Sum_probs=139.7 Q ss_pred CcccccchHHhhh-ccceeecCccccc-------------cccchhhh-hhhhhhcCCccccchhhhhHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQG-NQWLVHKGYVSRN-------------GDQWVINN-TALDAIGNPNVMLDADGGIAFYISQLAGIEA 65 (354) Q Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~~-~amda~~~~~~~~dA~~~~~fl~~~L~~id~ 65 (354) -.|+.+....-.. ...-...+..... +..+.+.. ..+.+. ...+++ .+.+++. +.+.+ T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~---~~~t~~--~gg~~vP--~~~~~ 127 (389) T protein:vir:10 55 DQIKALEAEKPAEPKTEPKDDGSKKGTDLSKKPIDAKKKAINDFIHSHGKVIDAT---SKVTST--EAGVLIP--EEIIY 127 (389) T ss_pred HHHHHHHHHHHhhhhccccccccccccccchhHHHHHHHHHHHHhhcchhhhhhh---cccccC--Ccceeeh--HHHHH Confidence 0111110000000 0000000000000 00000000 001110 011222 2334444 45667 Q ss_pred HHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 66 TVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 66 ~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) .|++........+.++.+..- + ..+..|.... ..+.+.+++..+...+.-+...+.....++.++.-+.+|..=|+ T Consensus 128 ~i~~~~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~i~~~~~k~~~~~~iS~ell~ 204 (389) T protein:vir:10 128 DPTAEVNSVVDLSTLVTKTPV-T--TPKGTYPILKRATDRFSSVAELAENPKLAEPEFNKVDWSVATYRGAIPLSEEAIA 204 (389) T ss_pred HHHHHHHhhhhHHhhcceeec-c--CCeeEEEEEecCCCccccccccccccccccccceeeeeeheeeEeeehhhHHHHh Confidence 788877777777777665422 1 2233444433 23444566655443223455677888888999888888876665 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) .+ ..++..--....++++...+|..++.|.......| ..+ ..+ ++++.++++..... T Consensus 205 ds---~~~l~~~i~~~la~~~~~~~~~~i~~g~~~~~~~~----------~~~----~~~----~d~l~~~~~~~~~~-- 261 (389) T protein:vir:10 205 DS---AVDLTALVGQSIKEKSVNTYNAMIAPVLQSFTAKK----------TTT----DTL----VDSLKHILNVDLDP-- 261 (389) T ss_pred hh---hHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc----------ccc----ccc----HHHHHHHHHhhhhh-- Confidence 43 33677778888899999999999888765421111 000 112 34455554422211 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCc-eeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANS-YTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~-~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) .. ...++++|+.|..|.+-. +..|. ||-.... .....+.+-++-..|.+........ ...| +..++|- T Consensus 262 ~~--~a~~~~n~~~~~~L~~lk--d~~G~----~i~~~~~~~~~~~~~~~~l~G~pV~~~~~~~~~--~~~~-~~~~~~g 330 (389) T protein:vir:10 262 AY--SRALVVTQSLFNTLDTLK--DKNGR----YLLHDASDSITDGTAKGTILGVPVYVVGDTLLG--SLAG-DQKAFVG 330 (389) T ss_pred hh--CcEEEecHHHHHHHHHhh--ccCCC----eeeecCcccccccccccccccceeEEecccccC--CCCC-ceEEEEe Confidence 11 247999999999997533 33332 1111000 0001122223444443322111111 1112 2223332 Q ss_pred cCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +=.+.+.+...+.++..-.........+....|++|. +.+|.+|+++.++ T Consensus 331 d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~r~d~~-~~~~~a~~~~~~~ 380 (389) T protein:vir:10 331 DLKRGVLFTDRQQVTLAWEDSKIYGKYLGAAFRFGVQ-KADSKAGYFVTNT 380 (389) T ss_pred eccccEEEEeecceEEEeeccccccceEEEEEEeccE-EecccceEEEEee Confidence 1112233333333333322222233345566787655 7889999999998 No 110 >protein:vir:3845 Length: 395 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050151;swissprot:trembl:q9t1f6;genbank:gi:9633043;uniprot:Q9T1F6;genbank:GeneID:1262163 Probab=97.10 E-value=0.00012 Score=42.04 Aligned_cols=309 Identities=7% Similarity=-0.024 Sum_probs=140.4 Q ss_pred Cccccc-----------chHHhhhccceeecCccccccccc---hhh----hhhhhhhcCCccccchhhhhHHHHHHHHH Q lcl|NC_020082. 1 MAIKTI-----------DAQTIQGNQWLVHKGYVSRNGDQW---VIN----NTALDAIGNPNVMLDADGGIAFYISQLAG 62 (354) Q Consensus 1 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~amda~~~~~~~~dA~~~~~fl~~~L~~ 62 (354) -.|+.+ +...-..+-.-..+.......... ... +..+...... .... .+++ +++. +. T Consensus 48 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~gg-~~vP--~~ 122 (395) T protein:vir:38 48 ASLKNAKMAQELAKSAYEDARANLNAEPVNKKPLPVKDGKPDAQAMKNQFVKDFKNLVTSG-TTGT-GNAG-LTIP--ED 122 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhhhhHHHHHHHHHHHHHHHHHHhhc-cCcc-CCCc-eecc--hh Confidence 000000 000000000000000000000000 000 0011111111 1111 1233 3333 45 Q ss_pred HHHHHHHhhhccccchhhccccCCCCCceeeEEEeee-cccCceeEecCCCCcccee-eeccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 63 IEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSY-DGVTMGKFIGANGQDLPRV-AQSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 63 id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~-~~~G~a~~~~~~~~dip~v-~~~~~~~~~pv~~~~~~~~~~~ 140 (354) +.+.|++.....-..+.+..+.. .......+.+... +..+.+.|++..+. +|.. ....+......+.++.-+.+|. T Consensus 123 ~~~~ii~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~v~E~~~-~~~~~~~~f~~v~~~~~k~~~~~~iS~ 200 (395) T protein:vir:38 123 IQLQIRTLTRSFTSLESLANVEN-VTTSHGSRVYEKLADITPLKDLDDESAL-IGDNDDPELTVVKYLIHRYAGITTVTN 200 (395) T ss_pred HhhHHHHHHHhhcchhhhcceee-ccCCcceEEEEeeccCCccccccccccc-cccccccceeeEEeeeeeeEeehhhHH Confidence 66778888887777777765432 2222223333333 23345566665433 4533 3556777788888888887776 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) .=++. ...++..--....+++++..+|+.+++|+...... .. . .+ +++|.+++.... T Consensus 201 ell~d---s~~~l~~~i~~~la~~~~~~~~~~il~g~g~~~~~----------~~-~-----~~----~~~i~~~~~~~l 257 (395) T protein:vir:38 201 TLLKD---TVDNIIQWLVNWAAKKDVVTRNAKILEVMGKAPKK----------PT-I-----SQ----FDNIKDLENNTL 257 (395) T ss_pred HHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc----------cc-c-----cc----HHHHHHHHHHhh Confidence 54433 34567777888899999999999999997643210 00 0 11 234444444222 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. .....-.++|+|..|..|.+-. +..|.-++. .+ ...+.+-+|...|.+........ +..+... + T Consensus 258 ~~--~~~~~a~~v~n~~~~~~L~~lk--d~~G~~l~~----~~---~~~~~~~~l~G~pV~~~~~~~~~--~~~~~~~-i 323 (395) T protein:vir:38 258 DP--AIESTSSFITNQSGYNILSKVK--DADGRYLMQ----PD---VTSPDKYLIDGKPVIRIADKWLP--DVSGSHP-L 323 (395) T ss_pred hh--hhcCCCEEEEcHHHHHHHHHhh--ccCCceeec----cC---cCCCCcceeccceeEEecccccC--cCCCcce-E Confidence 21 2223457899999999996533 333432211 11 11233334444444443321111 1122222 3 Q ss_pred EEEcCcceEEEeeccchhccccc-c----cCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAPQ-M----ASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~~-~----~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|-+-.+.+.+..-..++..-.. . ..=.+.+.++.+++ +.+.+|.+++.+++. T Consensus 324 ~~gd~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~r~~~r~d-~~~~~~~a~~~~~~~ 381 (395) T protein:vir:38 324 YFGDLKQGITLFDRQQMQIDTTNVGAGSFEHDTTKLRFIDRFD-VQLIDDGAFAAASFK 381 (395) T ss_pred EEEeccccEEEEEecceEEEEeccccchhhcCceEEEEEEeec-cEEecccceEEEEee Confidence 33221232333322222221111 1 11134556677775 677789999999999 No 111 >protein:vir:3870 Length: 400 # NCBI annotation: major head protein # Family: family:all:21 # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680487;swissprot:trembl:q8ltc0;genbank:gi:22296527;interpro:IPR006444;uniprot:Q8LTC0;genbank:GeneID:951713 Probab=97.08 E-value=5e-05 Score=44.15 Aligned_cols=296 Identities=8% Similarity=-0.033 Sum_probs=138.9 Q ss_pred Ccccc--------------------------------------cchHHhhhccceeecCccccccccchhhhhhhhhhcC Q lcl|NC_020082. 1 MAIKT--------------------------------------IDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGN 42 (354) Q Consensus 1 ~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~ 42 (354) ..++. .+....+....-.+..... ...-+..+.. T Consensus 63 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~- 134 (400) T protein:vir:38 63 EKRDLYEAALKGNEQSSGKKPDHPEEHSYRDALNAYLHTRGRNTDGVNFEKTDVGTFAVLRA-------VPTDASDAVN- 134 (400) T ss_pred HHHHHHHHHHHHHhhcccccccchhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhh-------hhHHHHHHHh- Confidence 00000 0000000000000000000 0000111110 Q ss_pred CccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeec Q lcl|NC_020082. 43 PNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQS 121 (354) Q Consensus 43 ~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~ 121 (354) ..++.++ +.+++. +.+.+.|++.....-..+.++++..- ...+..+.+.. ..+.+.+++..+......+.. T Consensus 135 -~~~~~~~--gg~~vP--~~~~~~ii~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 206 (400) T protein:vir:38 135 -AGVKAAD--AASTIP--ETISNTPQRELQTVVDLKPFTNVFQA---STQKGTYPTVANATTKMVTVAELEKNPAMAKPE 206 (400) T ss_pred -hcccccC--Cccccc--HHHHHHHHHHHHhhhhhhhcceeEec---cCcceEEEEEecCCCcccccccccccccccccc Confidence 1112222 234554 45677788877777667776665322 12234455443 456677777665432234556 Q ss_pred cceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccc Q lcl|NC_020082. 122 AQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYK 201 (354) Q Consensus 122 ~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~ 201 (354) .+......+.++.-+.+|.+=|+. ...++..--....++++...+|+.+++|.......| . T Consensus 207 f~~i~~~~~k~~~~~~is~ell~d---s~~~~~~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~------------~---- 267 (400) T protein:vir:38 207 FKPVNWSVETYRQALPVSQESIDD---SAIDLVGLIAQNGQQIKVNTTNGAVATLLKGFTAKT------------I---- 267 (400) T ss_pred ceeeEeehhheeeehhhHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc------------c---- Confidence 677777888888877777654433 344677777888888999999999998865321111 1 Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 202 TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 202 ~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) .+ +++|.+++...... .....++|+|+.|..|..- .+..|.-++.- ++ ..+.+-++...|.+ T Consensus 268 -~~----~~~~~~~~~~~~~~----~~~a~~v~~~~~~~~l~~l--kd~~G~~i~~~----~~---~~~~~~~l~G~pv~ 329 (400) T protein:vir:38 268 -SS----VDDLKHINNVDLDP----AYSRVIIASQSFYNFLDTV--KDGNGRYLLQD----SI---LTPSGKSVLGMPIA 329 (400) T ss_pred -cc----HHHHHHHHHhhhhh----hhCcEEEEcHHHHHHHHHh--hccCCCeeeec----Cc---CCCCccccccceeE Confidence 12 23444444332221 1235899999999998753 23334322210 00 11222234334433 Q ss_pred eeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 282 DAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 282 ~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ....... +..|.. .++|-+=.+.+.+..-..+++...........+.++.|++ +.+..|.+|+++.++ T Consensus 330 ~~~~~~~---~~~g~~-~~~~gd~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d-~~~~~~~a~~~l~~~ 397 (400) T protein:vir:38 330 VVSDDTL---GAAGEA-HAFLGDIKRAILFANRADFMVRWVDDQIYGQFLQAGMRFG-VSVADEKAGYFLTYT 397 (400) T ss_pred Eeccccc---CCCCce-EEEEEeccccEEEEeecceEEEEecccccceeEEEEEEec-cEEecccceEEEEee Confidence 3322111 122322 2333211122222222223322222222233456778875 556679999999999 No 112 >protein:vir:96123 Length: 274 # NCBI annotation: ORF013 # Family: family:all:522 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240078;genbank:gi:66395742;genbank:GeneID:5133103 Probab=97.06 E-value=0.00019 Score=40.98 Aligned_cols=263 Identities=7% Similarity=-0.001 Sum_probs=132.3 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCcc Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDL 115 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~di 115 (354) |- ...+..+| .+..| -+-+.+.+.....+....++.+.+.+. ..-.++.++.+...|.++.+.++ +++ T Consensus 1 ma----~~~T~~~d----~i~Pe--v~s~~v~~~~~~~~~~~~~~~~~~~l~g~~G~tv~ip~~~~~g~~~~~~~g-~~i 69 (274) T protein:vir:96 1 MA----QGTTKVSN----LIVPE--VLAPMMQAELDKKLRFAQFADIDSTLVGQPGDTLTFPAFTYSGDAQVIAEG-EKI 69 (274) T ss_pred CC----ccccchhh----hhhhH--HHHHHHHHHHHhhhhhcccccccccccCCCCCEEEEEeeccCCCccccCCC-CcC Confidence 11 11122222 11221 122223334444455555554443322 12356888888888998887664 578 Q ss_pred ceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCcccee Q lcl|NC_020082. 116 PRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSS 195 (354) Q Consensus 116 p~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~ 195 (354) +..+...+.....+...+.+|.+ .|++..+ .+.++-.+....+...+++..|+.++.-.... ... .. T Consensus 70 ~~~~it~~~~~~~i~~~~~~~~i--~D~~~~~-~~~d~~~~~~~~~~~~~a~~~d~~i~~~l~~a---------~~~-~~ 136 (274) T protein:vir:96 70 PVDQIGTSKREAKVRKIGKGTEL--TDEAVLS-GFGDPQGEAVRQHGLAIANKVDNDVLEALKGA---------TLT-VE 136 (274) T ss_pred chhhcccceeEEEEEeeeceeee--cHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCC-cC Confidence 87788877777888776655555 5666554 45566677788888899999988776332111 000 11 Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccC---CCCCCchHHHHHHhcCceeeccccc Q lcl|NC_020082. 196 ATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLM---TGYTDRTVMQHFMEANSYTLLTGNE 272 (354) Q Consensus 196 ~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~---~~~~~~Tvl~~l~~n~~~~~~~g~~ 272 (354) .+.. .++.|.++...|-.. ...+..|+|+|..+..|.+... ...++. .+=+.+++.+....|. T Consensus 137 ~~~~--------~~d~i~dA~~~l~d~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~~~~--g~~~~~~g~ig~~~G~- 202 (274) T protein:vir:96 137 ADIT--------KLDGLQTAIDKFNDE---DLEPMVLFVNPLDAGGLRTSASDNFTRPTQL--GDNIIVKGAFGEALGA- 202 (274) T ss_pred cccc--------cHHHHHHHHHHhccc---CCCceEEEeCHHHHHHHHhcccccccccccc--cccceeecccceecCe- Confidence 1111 156677777776543 2367899999999999965321 111110 0001122222222222 Q ss_pred ceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeee Q lcl|NC_020082. 273 LDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYV 351 (354) Q Consensus 273 l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~ 351 (354) +.+...... .+ ..+++ .+.-+.+....+.+.-.- .+....-.+.... ..|+-+.+|..++.+ T Consensus 203 ------~Vi~s~~~p------~~--t~~l~--~~gA~~~~~~~~~~vE~~Rd~~~~~d~i~~~~-~yg~~~~~~~~vv~~ 265 (274) T protein:vir:96 203 ------VIVRSNKLN------KG--EALLA--KKGAVKLITKRDFFLEKDRDASRKSTALYSDK-HYVAYLYDESKVVKI 265 (274) T ss_pred ------eEEEcCCCC------cc--eEEEE--eCcceeeeecCCcccccccchhhcccEEEEee-EEEEEEEcCccEEEE Confidence 222222110 01 11222 222333333233221110 0111122232232 468999999999999 Q ss_pred ecC Q lcl|NC_020082. 352 DMA 354 (354) Q Consensus 352 D~~ 354 (354) --+ T Consensus 266 t~~ 268 (274) T protein:vir:96 266 TKG 268 (274) T ss_pred EcC Confidence 888 No 113 >protein:vir:93881 Length: 387 # NCBI annotation: ORF011 # Family: family:all:658 # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239938;genbank:gi:66395599;genbank:GeneID:5130947 Probab=96.99 E-value=7.2e-05 Score=43.28 Aligned_cols=304 Identities=8% Similarity=-0.042 Sum_probs=141.4 Q ss_pred CcccccchHHhh--hccceeecCccc---c---ccccchhhhh--------hhhhhc-CCccccchhhhhHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQ--GNQWLVHKGYVS---R---NGDQWVINNT--------ALDAIG-NPNVMLDADGGIAFYISQLAGI 63 (354) Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~---~---~~~~~~~~~~--------amda~~-~~~~~~dA~~~~~fl~~~L~~i 63 (354) -.++.+++..-+ .+..-. +.... . .+....+..+ .+.+.. ..++....++++.+++. +.+ T Consensus 58 ~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~al~~~t~s~gG~~IP--~~~ 134 (387) T protein:vir:93 58 RQVKDIEEKEKAKVKDTGEA-YQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTL 134 (387) T ss_pred HHHHHHHHHHHHhhhhcccc-CCCcchhhHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccCcCCCCceeec--hhH Confidence 001111100000 000000 00000 0 0000000000 000000 01122223334445555 456 Q ss_pred HHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHH Q lcl|NC_020082. 64 EATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEM 143 (354) Q Consensus 64 d~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El 143 (354) .++|++.....-..|.+..+.+-.+ .++. ......+.+.|++... ..|..+...+......+.++.-+.+|.+=| T Consensus 135 ~~~Ii~~~~~~~~l~~~~~v~~~~~---~~~p-~~~~~~~~a~~v~E~~-~~~~~~~~f~~v~~~~~k~~~~~~iS~ell 209 (387) T protein:vir:93 135 SKEIVSEPFAKNQLREKARLTNIKG---LEIP-RVSYTLDDDDFITDVE-TAKELKLKGDTVKFTTNKFKVFAAISDTVI 209 (387) T ss_pred HHHHHHHHHhhchhhhheeeeecCC---ceEE-EEeecCCccccccCcc-cccccccccceeeeeheeeeeechhhHHHH Confidence 6778877766666677766654322 1221 1222345567777654 356666677777888888888888886545 Q ss_pred HHHHHhCCCcchHHHHHHHHHHHHHhhheeee-eehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHH Q lcl|NC_020082. 144 RKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-GDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINL 222 (354) Q Consensus 144 ~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~ 222 (354) +.+ ..++..--....++++...+++.+|. |.....-.|++++++++..+.. ..+++|.+++.+|... T Consensus 210 ~Ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~g~p~g~l~~~~~~~v~~~---------~~~d~i~~~~~~l~~~ 277 (387) T protein:vir:93 210 HGS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLDHMSFYNGSVKEVEGA---------DMYDAIINALADLHED 277 (387) T ss_pred hhh---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCCccccceeeecccccccccc---------chHHHHHHHHhccChh Confidence 433 44677777788888888888877664 4444445788888776544322 2356777777776543 Q ss_pred hCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEE Q lcl|NC_020082. 223 SRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVY 302 (354) Q Consensus 223 s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y 302 (354) +. ..-..+|++..|..+.+.. .++.+ .++ .+.+-+|...|...+..-...-.|+-+. ..+.+ T Consensus 278 --~~-~~a~~~mn~~t~~~~~~~~-~d~~~-~~~------------~~~~~~llG~PV~~~~~~~~~~~GDf~~-~~~~~ 339 (387) T protein:vir:93 278 --YR-DNATIYMRYADYVKIISVL-SNGTT-NFF------------DTPAEKVFGKPVVFTDAAVKPIVGDFNY-FGINY 339 (387) T ss_pred --hh-cCCEEEEechHHHHHHHHH-hcCCC-ccc------------ccCCccccccceEEecCCCceeeeehhh-hheeh Confidence 21 1235788888776654432 22222 111 1222334444444332211100111000 00001 Q ss_pred EcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 303 DKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 303 ~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) + .+-+.+. .+...-.+.+-+..|++|. +++|.||+++.+. T Consensus 340 ----~------~~~~~~~-~~~~~~~~~~~~~~r~d~~-v~~~eA~~~l~~k 379 (387) T protein:vir:93 340 ----D------GTTYDTD-KDVKKGEYLFVLTAWYDQQ-RTLDSAFRIAKAK 379 (387) T ss_pred ----h------hheeeec-ccccCCceeEEEEeeeCce-eechhheEEEEee Confidence 0 0111110 1122223344556787755 5679999999997 No 114 >protein:vir:93742 Length: 274 # NCBI annotation: ORF013 # Family: family:all:522 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240459;genbank:gi:66396126;genbank:GeneID:5133511 Probab=96.91 E-value=0.00026 Score=40.20 Aligned_cols=265 Identities=8% Similarity=0.009 Sum_probs=131.9 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCC-ceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPE-YADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~-~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) |-...+.-+|-- .. +.+.+.+.+.....+....+..+...+.. .-.++.++.+...|.++.+.++ ++++.-+ T Consensus 1 ma~~~T~~~~~i----iP--ev~~~~v~~~~~~~~~~~~~~~~~~~l~g~~G~tv~ip~~~~~g~~~~~~eg-~~i~~~~ 73 (274) T protein:vir:93 1 MPQGITKTSNQI----IP--EVLAPMMQAQLEKKLRFASFAEVDSTLQGQPGDTLTFPAFVYSGDAQVVAEG-EKIPTDI 73 (274) T ss_pred CCccceehhhee----ch--HHHHHHHHHHHHhhhhhcccccccccccCCCCCEEEEEeeccCCCcccccCC-Ccccccc Confidence 112223333311 11 11222233333333444444444332221 2346788888888999888664 5688778 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+|.+ .|++.++. +.++-..-.+.+.+++++..|+.++....+. + ... .+ T Consensus 74 it~~~~~~~i~~~~~~~~i--~D~~~~~~-~~d~~~~~~~~~~~~~a~~~d~~~~~~~~~a--------~-~~~---~~- 137 (274) T protein:vir:93 74 LETKKREAKIRKIAKGTSI--TDEALLSG-YGDPQGEQVRQHGLAHANKVDNDVLEALMGA--------K-LTV---NA- 137 (274) T ss_pred cccceeEEEeeeecccccc--cHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--------c-ccc---cc- Confidence 8888888888776655555 56655553 4556677778888899999988776432111 1 011 11 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH-HHHHHhcCceeecccccceEEee Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV-MQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv-l~~l~~n~~~~~~~g~~l~I~~~ 278 (354) +++ -++.|.+++.+|-.. ...+..|+|+|..+..|.+.........+- .+-+..++.+. ++... T Consensus 138 --~~~---~~d~i~dA~~~l~d~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~g~~~~~~G~ig-------~~~G~ 202 (274) T protein:vir:93 138 --DIT---KLNGLQSAIDKFNDE---DLEPMVLFINPLDAGKLRGDASTNFTRATELGDDIIVKGAFG-------EALGA 202 (274) T ss_pred --ccc---CHHHHHHHHHHhhhc---cCCccEEEeCHHHHHHHHhhhhhcccccccccccceeecccc-------eecCe Confidence 011 156677777776542 236789999999999997531111000000 00011122221 22222 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +........ .+ ..++ ..+..+.+..-.+.+.-.- .++...-.+.... ..|+-+.+|..++.+-.+ T Consensus 203 ~Vi~s~~~p------~~--t~~l--~~~gai~~~~~~~~~vE~~Rd~~~~~d~i~~~~-~y~~~~~~~~~~v~~t~~ 268 (274) T protein:vir:93 203 IIVRTNKLE------AG--TAIL--AKKGAVKLILKRDFFLEVARDASTKTTALYSDK-HYVAYLYDESKAVKITKG 268 (274) T ss_pred eEEEcCCCC------cc--eEEE--EeCCeEEEEecCCcccccccchhhcccEEEEEE-EEEEEEEcCCceEEEeeC Confidence 333322211 11 1122 2233444433333222111 1111222333333 357999999999988777 No 115 >protein:vir:9361 Length: 402 # NCBI annotation: SLT orf 37-like protein # Family: family:all:658 # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803339;genbank:gi:29028650;genbank:GeneID:1258088 Probab=96.89 E-value=0.0001 Score=42.43 Aligned_cols=304 Identities=7% Similarity=-0.079 Sum_probs=142.3 Q ss_pred CcccccchHHhhhccceeecCcccccccc-------chh--------hhhhhhhhc-CCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQ-------WVI--------NNTALDAIG-NPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~~amda~~-~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.++.++...=+......-++........ +.+ ....+.+.. ..++....++.+.+++. +.+. T Consensus 73 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~a~~~~t~~~GG~lIP--~~~~ 150 (402) T protein:vir:93 73 RQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTLS 150 (402) T ss_pred HHHHHHHHHHHhhhhhccccCCCCchhHHHHHHHHHHHHHHHhhhhHHHHHHhHHHHHhhhccCCCcCCccccc--hhHH Confidence 01111111110000011001000000000 000 000111100 01112222333445555 4567 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) .+|++.....-..|.++.+.+..+ .++. ......+.+.|++... ..|..+...+......+.++.-+.+|.+=|+ T Consensus 151 ~~Ii~~~~~~~~l~~~~~v~~~~~---~~~p-~~~~~~~~a~~v~Eg~-~~~~~~~~f~~i~~~~~k~~~~i~iS~ell~ 225 (402) T protein:vir:93 151 KEIVSEPFAKNQLREKARLTNIKG---LEIP-RVSYTLDDDDFITDVE-TAKELKAKGDTVKFTTNKFKVFAAISDTVIH 225 (402) T ss_pred HHHHHhHHhhhhhhhhceeeecCC---ceee-eeeccCCccccccccc-cccccccccceeeecceeeeeechhhHHHHh Confidence 788887766666677766543322 1111 1122344567777654 3566667777888888888888888866455 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeee-eehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-GDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....++++...+++.+|. |.....-.|++++++++..+.. ..+++|.+++..|... T Consensus 226 Ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~g~p~g~~~~~~~~~~~~~---------~~~d~l~~~~~~l~~~- 292 (402) T protein:vir:93 226 GS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGA---------DMYDAIINALADLHED- 292 (402) T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCCccccceeeecccccccccc---------chHHHHHHHHhccChh- Confidence 43 44567777777888888888776654 4444445688887776544322 2367788888776542 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) +. ..-..+|++..+..+.+.. .+ .+..++ .+.|-+|...|...+..-. +..++ + T Consensus 293 -y~-~na~~imn~~t~~~~~~~~-~d-~~~~~~------------~~~~~~llG~PV~~t~~~~---------~i~~G-D 346 (402) T protein:vir:93 293 -YR-DNATIYMRYADYVKIISVL-SN-GTTNFF------------DTPAEKVFGKPVVFTDAAV---------KPIVG-D 346 (402) T ss_pred -hh-cCCEEEEechHHHHHHHHH-hc-CCCccc------------ccCCccccccceEEecCCC---------ceeee-c Confidence 21 2236788888776665432 22 222221 1222233333333322110 11110 1 Q ss_pred cCcceEEEeeccchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. ..+.. ...+..-+ -+...-...+-+..|++|. +.+|.||+++.|. T Consensus 347 f~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~Dg~-v~~~~A~~~l~ik 394 (402) T protein:vir:93 347 FN-YFGIN--YDGTTYDTDKDVKKGEYLFVLTAWYDQQ-RTLDSAFRIAKAK 394 (402) T ss_pred hh-hhhhh--hhhhhhhhhhcccCCceEEEEEEEeCcE-EechhheEEEEee Confidence 10 00000 00011000 1111224556677888655 5579999999997 No 116 >protein:vir:96978 Length: 387 # NCBI annotation: ORF009 # Family: family:all:658 # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239859;genbank:gi:66395517;genbank:GeneID:5133011 Probab=96.68 E-value=0.0001 Score=42.46 Aligned_cols=304 Identities=7% Similarity=-0.074 Sum_probs=142.0 Q ss_pred CcccccchHHhhhccceeecCccccccccc-------hhh--------hhhhhhhc-CCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQW-------VIN--------NTALDAIG-NPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~amda~~-~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.++.+++..-+......-++......... .+. ...+.+.. ..++....++++.+++. +.+. T Consensus 58 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~a~~~~~~~~gG~lIP--~~~~ 135 (387) T protein:vir:96 58 RQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTLS 135 (387) T ss_pred HHHHHHHHHHHhhhhhccccCCCCchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCCCCCceeec--hhHH Confidence 111111111111111110010000000000 000 00000000 01111222233345555 4567 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) ++|++.....-..|.++.+.+..+ .++. .+....+.+.|++... ..|..+...+......+.++.-+.+|.+=|+ T Consensus 136 ~~Ii~~~~~~~~l~~~~~~~~~~~---~~~p-~~~~~~~~a~~v~Eg~-~~~~~~~~f~~v~l~~~k~~~~i~iS~ell~ 210 (387) T protein:vir:96 136 KEIVSEPFAKNQLREKARLTNIKG---LEIP-RVSYTLDDDDFITDVE-TAKELKAKGDTVKFTTNKFKVFAAISDTVIH 210 (387) T ss_pred HHHHHHHHhhchhhhhceeeecCC---ceee-eeeccCCccccccccc-cccccccccceeeechheeeeechhhHHHHh Confidence 888887777666677766543322 1221 1222345566776543 4566667777788888888888888866454 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeee-eehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-GDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....++++...+++.+|. |.....-.|+++.++++..+.. ..+++|.+++..|... T Consensus 211 ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~g~~~g~~~~~~~~~~~~~---------~~~d~i~~~~~~l~~~- 277 (387) T protein:vir:96 211 GS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGA---------DMYDAIINALADLHED- 277 (387) T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCCccccceeeecccccccccc---------chHHHHHHHHhccChh- Confidence 43 44666667777778888888776664 4444445688887776544322 2367778887777543 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) + ...-..+|++..|..+.+.. .+ .+..++ .+.+-+|...|...+..-. + +++-+ T Consensus 278 -y-~~na~~imn~~t~~~~~~~~-~~-~~~~~~------------~~~~~~llG~PV~~~~~~~---------~-~~~GD 331 (387) T protein:vir:96 278 -Y-RDNATIYMRYADYVKIISVL-SN-GTTNFF------------DTPAEKVFGKPVVFTDAAV---------K-PIVGD 331 (387) T ss_pred -h-hcCCEEEEechHHHHHHHHH-hc-CCCccc------------ccCCccccccceEEecCCC---------c-eeeec Confidence 1 12236788888777665432 22 222221 1122223333332222100 0 11111 Q ss_pred cCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. ..+.. ...+...+. +...-...+.+..|++ ..+++|.||+++.|. T Consensus 332 f~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~D-g~v~~~~A~~~l~~k 379 (387) T protein:vir:96 332 FN-YFGIN--YDGTTYDTDKDVKKGEYLFVLTAWYD-QQRTLDSAFRIAKAK 379 (387) T ss_pred hh-hhhhh--hhhhhheecccccCCceEEEEEEEeC-cEeechhheEEEEee Confidence 11 00000 011111111 1122234566677876 455689999999997 No 117 >protein:vir:94424 Length: 387 # NCBI annotation: ORF010 # Family: family:all:658 # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240005;genbank:gi:66395666;genbank:GeneID:5133084 Probab=96.68 E-value=0.0001 Score=42.46 Aligned_cols=304 Identities=7% Similarity=-0.074 Sum_probs=142.0 Q ss_pred CcccccchHHhhhccceeecCccccccccc-------hhh--------hhhhhhhc-CCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQW-------VIN--------NTALDAIG-NPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~amda~~-~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.++.+++..-+......-++......... .+. ...+.+.. ..++....++++.+++. +.+. T Consensus 58 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~a~~~~~~~~gG~lIP--~~~~ 135 (387) T protein:vir:94 58 RQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTLS 135 (387) T ss_pred HHHHHHHHHHHhhhhhccccCCCCchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCCCCCceeec--hhHH Confidence 111111111111111110010000000000 000 00000000 01111222233345555 4567 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) ++|++.....-..|.++.+.+..+ .++. .+....+.+.|++... ..|..+...+......+.++.-+.+|.+=|+ T Consensus 136 ~~Ii~~~~~~~~l~~~~~~~~~~~---~~~p-~~~~~~~~a~~v~Eg~-~~~~~~~~f~~v~l~~~k~~~~i~iS~ell~ 210 (387) T protein:vir:94 136 KEIVSEPFAKNQLREKARLTNIKG---LEIP-RVSYTLDDDDFITDVE-TAKELKAKGDTVKFTTNKFKVFAAISDTVIH 210 (387) T ss_pred HHHHHHHHhhchhhhhceeeecCC---ceee-eeeccCCccccccccc-cccccccccceeeechheeeeechhhHHHHh Confidence 888887777666677766543322 1221 1222345566776543 4566667777788888888888888866454 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeee-eehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-GDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....++++...+++.+|. |.....-.|+++.++++..+.. ..+++|.+++..|... T Consensus 211 ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~g~~~g~~~~~~~~~~~~~---------~~~d~i~~~~~~l~~~- 277 (387) T protein:vir:94 211 GS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGA---------DMYDAIINALADLHED- 277 (387) T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCCccccceeeecccccccccc---------chHHHHHHHHhccChh- Confidence 43 44666667777778888888776664 4444445688887776544322 2367778887777543 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) + ...-..+|++..|..+.+.. .+ .+..++ .+.+-+|...|...+..-. + +++-+ T Consensus 278 -y-~~na~~imn~~t~~~~~~~~-~~-~~~~~~------------~~~~~~llG~PV~~~~~~~---------~-~~~GD 331 (387) T protein:vir:94 278 -Y-RDNATIYMRYADYVKIISVL-SN-GTTNFF------------DTPAEKVFGKPVVFTDAAV---------K-PIVGD 331 (387) T ss_pred -h-hcCCEEEEechHHHHHHHHH-hc-CCCccc------------ccCCccccccceEEecCCC---------c-eeeec Confidence 1 12236788888777665432 22 222221 1122223333332222100 0 11111 Q ss_pred cCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. ..+.. ...+...+. +...-...+.+..|++ ..+++|.||+++.|. T Consensus 332 f~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~D-g~v~~~~A~~~l~~k 379 (387) T protein:vir:94 332 FN-YFGIN--YDGTTYDTDKDVKKGEYLFVLTAWYD-QQRTLDSAFRIAKAK 379 (387) T ss_pred hh-hhhhh--hhhhhheecccccCCceEEEEEEEeC-cEeechhheEEEEee Confidence 11 00000 011111111 1122234566677876 455689999999997 No 118 >protein:vir:2685 Length: 387 # NCBI annotation: hypothetical protein # Family: family:all:658 # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075504;genbank:gi:12719433;genbank:GeneID:920169 Probab=96.68 E-value=0.0001 Score=42.46 Aligned_cols=304 Identities=7% Similarity=-0.074 Sum_probs=142.0 Q ss_pred CcccccchHHhhhccceeecCccccccccc-------hhh--------hhhhhhhc-CCccccchhhhhHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQW-------VIN--------NTALDAIG-NPNVMLDADGGIAFYISQLAGIE 64 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~amda~~-~~~~~~dA~~~~~fl~~~L~~id 64 (354) -.++.+++..-+......-++......... .+. ...+.+.. ..++....++++.+++. +.+. T Consensus 58 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~a~~~~~~~~gG~lIP--~~~~ 135 (387) T protein:vir:26 58 RQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLP--KTLS 135 (387) T ss_pred HHHHHHHHHHHhhhhhccccCCCCchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCCCCCceeec--hhHH Confidence 111111111111111110010000000000 000 00000000 01111222233345555 4567 Q ss_pred HHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHH Q lcl|NC_020082. 65 ATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMR 144 (354) Q Consensus 65 ~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~ 144 (354) ++|++.....-..|.++.+.+..+ .++. .+....+.+.|++... ..|..+...+......+.++.-+.+|.+=|+ T Consensus 136 ~~Ii~~~~~~~~l~~~~~~~~~~~---~~~p-~~~~~~~~a~~v~Eg~-~~~~~~~~f~~v~l~~~k~~~~i~iS~ell~ 210 (387) T protein:vir:26 136 KEIVSEPFAKNQLREKARLTNIKG---LEIP-RVSYTLDDDDFITDVE-TAKELKAKGDTVKFTTNKFKVFAAISDTVIH 210 (387) T ss_pred HHHHHHHHhhchhhhhceeeecCC---ceee-eeeccCCccccccccc-cccccccccceeeechheeeeechhhHHHHh Confidence 888887777666677766543322 1221 1222345566776543 4566667777788888888888888866454 Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHhhheeee-eehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 145 KSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-GDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 145 ~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) .+ ..++..--....++++...+++.+|. |.....-.|+++.++++..+.. ..+++|.+++..|... T Consensus 211 ds---~~~l~~~i~~~la~~~~~~e~~~~~~~g~g~g~~~g~~~~~~~~~~~~~---------~~~d~i~~~~~~l~~~- 277 (387) T protein:vir:26 211 GS---DVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGA---------DMYDAIINALADLHED- 277 (387) T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHhHhhcCCCccccceeeecccccccccc---------chHHHHHHHHhccChh- Confidence 43 44666667777778888888776664 4444445688887776544322 2367778887777543 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) + ...-..+|++..|..+.+.. .+ .+..++ .+.+-+|...|...+..-. + +++-+ T Consensus 278 -y-~~na~~imn~~t~~~~~~~~-~~-~~~~~~------------~~~~~~llG~PV~~~~~~~---------~-~~~GD 331 (387) T protein:vir:26 278 -Y-RDNATIYMRYADYVKIISVL-SN-GTTNFF------------DTPAEKVFGKPVVFTDAAV---------K-PIVGD 331 (387) T ss_pred -h-hcCCEEEEechHHHHHHHHH-hc-CCCccc------------ccCCccccccceEEecCCC---------c-eeeec Confidence 1 12236788888777665432 22 222221 1122223333332222100 0 11111 Q ss_pred cCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. ..+.. ...+...+. +...-...+.+..|++ ..+++|.||+++.|. T Consensus 332 f~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~D-g~v~~~~A~~~l~~k 379 (387) T protein:vir:26 332 FN-YFGIN--YDGTTYDTDKDVKKGEYLFVLTAWYD-QQRTLDSAFRIAKAK 379 (387) T ss_pred hh-hhhhh--hhhhhheecccccCCceEEEEEEEeC-cEeechhheEEEEee Confidence 11 00000 011111111 1122234566677876 455689999999997 No 119 >protein:vir:94494 Length: 274 # NCBI annotation: ORF015 # Family: family:all:522 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240676;genbank:gi:66396348;genbank:GeneID:5133758 Probab=96.68 E-value=0.00042 Score=39.11 Aligned_cols=265 Identities=8% Similarity=0.026 Sum_probs=129.7 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCC-ceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPE-YADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~-~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) |....+.-+|--. . +-+.+.+.+.....+....++.+...+.. .-.++.++.+...|.++.+.++ ++++.-+ T Consensus 1 ma~~~T~~~d~ii----P--ev~~~~v~~~~~~~l~~~~~~~~d~~l~g~~G~tv~iP~~~~~g~a~~~~~g-~~i~~~~ 73 (274) T protein:vir:94 1 MPQGLTKTSDQII----P--EVLAPMMQAQLEKKLRFASFAEVDSTLQGQPGDTLTFPAFVYSGDAQVVAEG-EKIPTDI 73 (274) T ss_pred CCccceehhheec----h--HHHHHHHHHhhhhhhhhcccceecccccCCCCCEEEEeeecCCCccccccCC-Ccccccc Confidence 2223333333221 1 11222233333344444444444332211 2457888888888999887664 5688777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+ |.+.|++.++..+ ++-..-.+.+..++++..|+.++.-... ....... T Consensus 74 lt~~~~~~~i~~~~~~--~~i~D~~~~~~~~-dp~~~~~~~~a~a~a~~vd~~~~~~l~~---------a~~~~~~---- 137 (274) T protein:vir:94 74 LETKKREAKIRKIAKG--TSITDEALLSGYG-DPQGEQVRQHGLAHANKVDNDVLEALMG---------AKLTVNA---- 137 (274) T ss_pred cccceeEEEeeeecce--ecccHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHHHHHHhc---------cCccccc---- Confidence 8777888888776554 5556666666444 4556667778888888888876632111 1111110 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH-HHHHHhcCceeecccccceEEee Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV-MQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv-l~~l~~n~~~~~~~g~~l~I~~~ 278 (354) +++. ++.|.++..+|-.. ...+..|+|+|..+..|.+.........|- -+-+..++.+. ++... T Consensus 138 --~~~~---~d~i~dA~~~l~d~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~g~~~~~~G~ig-------~~~G~ 202 (274) T protein:vir:94 138 --DITK---LNGLQSAIDKFNDE---DLEPMVLFVNPLDAGKLRGDASTNFTRATELGDDIIVKGAFG-------EALGA 202 (274) T ss_pred --cccC---HHHHHHHHHHhhcc---CCCceEEEeCHHHHHHHHhhhhhhccccCcccccceeccccc-------eecCe Confidence 1111 56777777776543 236789999999999997532110000000 00011122221 22222 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.+...... .++ .+++ .+.-+.+....+.+.-.- .+....-.+.... ..|+-+.+|..++.+--+ T Consensus 203 ~Vi~s~~~p------~~t--~~l~--~~gA~~~~~~~~~~vE~~Rd~~~~~d~i~~~~-~y~~~~~~~~~vv~~t~~ 268 (274) T protein:vir:94 203 IIVRTNKLE------AGT--AILA--KKGAVKLILKRDFFLEVARDASTKTTALYSDK-HYVAYLYDESKAVKITKG 268 (274) T ss_pred eEEEcCCCC------cce--EEEE--eCcceEeeecCCceeccccchhhcccEEEEEE-EEEEEEEcCCceEEEecC Confidence 222222111 111 1222 233333333333222111 0111222222222 457899999888887666 No 120 >protein:vir:97433 Length: 274 # NCBI annotation: ORF014 # Family: family:all:522 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240749;genbank:gi:66396420;genbank:GeneID:5133789 Probab=96.68 E-value=0.00042 Score=39.11 Aligned_cols=265 Identities=8% Similarity=0.026 Sum_probs=129.7 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCC-ceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPE-YADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~-~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) |....+.-+|--. . +-+.+.+.+.....+....++.+...+.. .-.++.++.+...|.++.+.++ ++++.-+ T Consensus 1 ma~~~T~~~d~ii----P--ev~~~~v~~~~~~~l~~~~~~~~d~~l~g~~G~tv~iP~~~~~g~a~~~~~g-~~i~~~~ 73 (274) T protein:vir:97 1 MPQGLTKTSDQII----P--EVLAPMMQAQLEKKLRFASFAEVDSTLQGQPGDTLTFPAFVYSGDAQVVAEG-EKIPTDI 73 (274) T ss_pred CCccceehhheec----h--HHHHHHHHHhhhhhhhhcccceecccccCCCCCEEEEeeecCCCccccccCC-Ccccccc Confidence 2223333333221 1 11222233333344444444444332211 2457888888888999887664 5688777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+ |.+.|++.++..+ ++-..-.+.+..++++..|+.++.-... ....... T Consensus 74 lt~~~~~~~i~~~~~~--~~i~D~~~~~~~~-dp~~~~~~~~a~a~a~~vd~~~~~~l~~---------a~~~~~~---- 137 (274) T protein:vir:97 74 LETKKREAKIRKIAKG--TSITDEALLSGYG-DPQGEQVRQHGLAHANKVDNDVLEALMG---------AKLTVNA---- 137 (274) T ss_pred cccceeEEEeeeecce--ecccHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHHHHHHhc---------cCccccc---- Confidence 8777888888776554 5556666666444 4556667778888888888876632111 1111110 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH-HHHHHhcCceeecccccceEEee Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV-MQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv-l~~l~~n~~~~~~~g~~l~I~~~ 278 (354) +++. ++.|.++..+|-.. ...+..|+|+|..+..|.+.........|- -+-+..++.+. ++... T Consensus 138 --~~~~---~d~i~dA~~~l~d~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~g~~~~~~G~ig-------~~~G~ 202 (274) T protein:vir:97 138 --DITK---LNGLQSAIDKFNDE---DLEPMVLFVNPLDAGKLRGDASTNFTRATELGDDIIVKGAFG-------EALGA 202 (274) T ss_pred --cccC---HHHHHHHHHHhhcc---CCCceEEEeCHHHHHHHHhhhhhhccccCcccccceeccccc-------eecCe Confidence 1111 56777777776543 236789999999999997532110000000 00011122221 22222 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.+...... .++ .+++ .+.-+.+....+.+.-.- .+....-.+.... ..|+-+.+|..++.+--+ T Consensus 203 ~Vi~s~~~p------~~t--~~l~--~~gA~~~~~~~~~~vE~~Rd~~~~~d~i~~~~-~y~~~~~~~~~vv~~t~~ 268 (274) T protein:vir:97 203 IIVRTNKLE------AGT--AILA--KKGAVKLILKRDFFLEVARDASTKTTALYSDK-HYVAYLYDESKAVKITKG 268 (274) T ss_pred eEEEcCCCC------cce--EEEE--eCcceEeeecCCceeccccchhhcccEEEEEE-EEEEEEEcCCceEEEecC Confidence 222222111 111 1222 233333333333222111 0111222222222 457899999888887666 No 121 >protein:vir:100632 Length: 381 # NCBI annotation: 77ORF006 # Family: family:all:635 # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958606;genbank:gi:41189521;genbank:GeneID:2743778 Probab=96.64 E-value=0.00044 Score=38.97 Aligned_cols=309 Identities=9% Similarity=-0.075 Sum_probs=142.3 Q ss_pred CcccccchHH-----------------hh-----------------------hccceeecCccccccccchhhhhhhhhh Q lcl|NC_020082. 1 MAIKTIDAQT-----------------IQ-----------------------GNQWLVHKGYVSRNGDQWVINNTALDAI 40 (354) Q Consensus 1 ~~~~~~~~~~-----------------~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~amda~ 40 (354) |+||..+.=. .+ .+.+...+| .+........ ..++ T Consensus 1 m~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~l~~~e~~---~~~~- 75 (381) T protein:vir:10 1 MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKS-AQTLSANQRN---FFMD- 75 (381) T ss_pred CchhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhccc-ccccCHHHHH---HHHH- Confidence 3333211100 00 000000011 1111111000 1111 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQ 120 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~ 120 (354) +..+.++.+.+++. +.+..+|++.....=..|.+..+..- +.. ......+..+.+.|....+.--+..+. T Consensus 76 ----~~~~t~~~Gg~lvP--~~~~~~I~~~l~~~spir~~a~v~~~-~~~---~~i~~~~~~~~a~W~~e~~~~~~~~~~ 145 (381) T protein:vir:10 76 ----INKSVGYKEEKLLP--EETIDRIFEDLTTNHPLLADLGIKNA-GLR---LKFLKSETSGVAVWGKIYGEIKGQLDA 145 (381) T ss_pred ----HhhcCCCCCceecC--HHHHHHHHHHHHhhcceeeeeeeEec-Ccc---eEEEeecCCcceEEeecccccccccCc Confidence 11222333445655 55677787766555444555544332 211 223445566777776643321123445 Q ss_pred ccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc--eec-c Q lcl|NC_020082. 121 SAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL--SSA-T 197 (354) Q Consensus 121 ~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~--~~~-~ 197 (354) ..+....+.+.+..-..++.+=|+.+ ..+|+.--....++++++.+++-+++|+...+-.||+++.+-.. ... . T Consensus 146 ~f~~i~l~~~kl~a~i~is~elL~Ds---~~~le~~i~~~la~~~a~~~~~afi~GdG~~qP~Gil~~~~~~~~~~~g~~ 222 (381) T protein:vir:10 146 AFSEETAIQNKLTAFVVLPKDLNDFG---PAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTDGAY 222 (381) T ss_pred cceeEeecceeEEeeccccHHHHhcc---HHHHHHHHHHHHHHHHHHHhhceeEecccCCCceeeeecCCcccccccccc Confidence 67778888888888778876666554 45788888899999999999999999998888889998754221 111 1 Q ss_pred ccc------cccCHHHHHHHHHHHHHHHHHHhCCcc----cccEEEeCHHHHHHHhhccC-CCCCCchHHHHHHhcCcee Q lcl|NC_020082. 198 KDY------KTMNGQELFNMLNAPIFSVINLSRRFH----VPNTALMFPDLWNQANNQLM-TGYTDRTVMQHFMEANSYT 266 (354) Q Consensus 198 ~~w------~~~T~~ei~~di~~~~~~l~~~s~g~~----~p~~L~l~p~~~~~L~~~~~-~~~~~~Tvl~~l~~n~~~~ 266 (354) +++ ...++...++.+...+..+...-.+.. +-.+++|+|..+..+..... .+..| .+. T Consensus 223 ~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vmn~~t~~~l~~~~~~~~~~G-----------~~v 291 (381) T protein:vir:10 223 PEKEEQGTLTFANPRATVNELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNANG-----------VYV 291 (381) T ss_pred ccccccccccccchhhHHHHHHHHHHhhhhhhccccccccCceEEEEchhhHHhhccccccCCCCC-----------cee Confidence 111 111222333333333333322111111 22367899988877643211 11111 111 Q ss_pred ecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCc--eeEEeeeeeeeeEEEE Q lcl|NC_020082. 267 LLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASL--GITVPAEYKISGTEFR 343 (354) Q Consensus 267 ~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~--~~~~~~~~~~gGv~i~ 343 (354) ..-+.+..|. .+... ..|+ ++..+.+. +.+..-+.+++-.. +.... ...+....|.+ -.++ T Consensus 292 ~~lp~g~~vv-----~~~~~------p~~~--i~fGDfs~--Y~i~~r~~~~i~~~~~~~~~~d~~~f~a~~r~d-G~~~ 355 (381) T protein:vir:10 292 TALPFNLNVI-----ESTVQ------EAGK--VLTYVKGL--YDGYLAGGINVQKFKETLALDDMDLYTAKQFAY-GKAK 355 (381) T ss_pred ecCCCCceeE-----EcCCC------CcCc--EEEEEccc--EEEEEecccEEEeechhhhhcCceEEEEEEEEc-CEEe Confidence 0001111221 11111 0111 12112221 12222222221111 11111 12344556654 5678 Q ss_pred CcceeeeeecC Q lcl|NC_020082. 344 YPLCAAYVDMA 354 (354) Q Consensus 344 ~P~ai~y~D~~ 354 (354) .|.|++++|++ T Consensus 356 ~~~A~~v~~l~ 366 (381) T protein:vir:10 356 DNKVAAVWKLD 366 (381) T ss_pred cCCcEEEEEEe Confidence 99999999998 No 122 >protein:vir:96833 Length: 275 # NCBI annotation: ORF015 # Family: family:all:522 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240157;genbank:gi:66395822;genbank:GeneID:5133174 Probab=96.52 E-value=0.00055 Score=38.47 Aligned_cols=266 Identities=7% Similarity=0.022 Sum_probs=128.9 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCC-CCceeeEEEeeecccCceeEecCCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANI-PEYADTWMYRSYDGVTMGKFIGANGQ 113 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~-~~~~~~~~~~~~~~~G~a~~~~~~~~ 113 (354) |||-+ .+..+| .+..| .+-+-+.+.....+....+..+.+.+ +..-.++..+.+...|.++.+.++ + T Consensus 1 ~~~~~-----~T~l~d----~i~PE--v~~~~v~~~~~~~~~~~~~~~~~~~l~g~~G~tv~iP~~~~ig~a~~~~~g-~ 68 (275) T protein:vir:96 1 MALEN-----MTKLAN----MVNPE--VLAPMMQAELDKKLKFAQFADIDNTLVGQPGNTITFPAFVYSGDAKVVPEG-E 68 (275) T ss_pred CCCcc-----cchhhh----hhchH--HHHHHHHHHHHHhhhhcccceecccccCCCCCEEEeeeeccCCccccccCC-C Confidence 55543 233333 11221 12222333333344444444433331 112457888888888999887664 5 Q ss_pred ccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc Q lcl|NC_020082. 114 DLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL 193 (354) Q Consensus 114 dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~ 193 (354) +++......+.....+...+.+|.+ .|++..+. +.++-.+-.+.+...+++..|+-++. .+ +....+. T Consensus 69 ~i~~~~lt~~~~~~~i~~~~~~~~i--~D~~~~~~-~~d~~~~~~~~~a~~~a~~~d~~ll~---~l------~~a~~~~ 136 (275) T protein:vir:96 69 EIPIDLIETKKRQATIRKIGKGTVL--TDEALLSG-YGDPKGEAVRQHGLAIANKVDNDVLE---AL------QGATLKV 136 (275) T ss_pred CcchhhcccceeeEEeehhcccccc--cHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHHHH---HH------hcccccc Confidence 6887777888888888776665555 56655543 44555666777888888888876652 11 1111111 Q ss_pred eeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHH-HHHHhcCceeeccccc Q lcl|NC_020082. 194 SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVM-QHFMEANSYTLLTGNE 272 (354) Q Consensus 194 ~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl-~~l~~n~~~~~~~g~~ 272 (354) +.+. -+ ++.|.+++..+-.. ...+..|+|+|..+..|.+.........+.. +-+..|+.+ T Consensus 137 -~~~~----~~----~d~i~dA~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~~~~g~~~~~~G~i------- 197 (275) T protein:vir:96 137 -EADI----TK----LAGLQTAIDKFNDE---DLEPMVLFVNPLDAGKLRASATDNFTRATLLGDNVIVKGAF------- 197 (275) T ss_pred -cccc----cC----HHHHHHHHHHhccc---cCCccEEEeCHHHHHHHHhcccccccccccccccceecccc------- Confidence 1111 11 56677777776432 3467899999999999954311000000000 001112222 Q ss_pred ceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeee Q lcl|NC_020082. 273 LDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYV 351 (354) Q Consensus 273 l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~ 351 (354) -++...+.+...... .+ ..+++. +.-+.+....+++.-.- ......-.+... ...|+-+.+|..++.+ T Consensus 198 g~~~G~~Vi~s~~~p------~~--t~~i~~--~gA~~~~~~~~~~vE~~Rd~~~~~d~i~~~-~~y~~~~~~~~~vv~~ 266 (275) T protein:vir:96 198 GEALGAIIVRSNKIK------EG--EAILAK--RGAVKLITKRDFFLETERHASHKSTALFSD-KHYVAYLYDESKVVKI 266 (275) T ss_pred ceecCeeEEEeCCCC------cc--eEEEEe--ccceeeeecCCcccccccchhhcCcEEEEe-EEEEEEEEcCccEEEE Confidence 222223333322211 11 112222 22233322222221100 001112222222 3458999999999987 Q ss_pred ecC Q lcl|NC_020082. 352 DMA 354 (354) Q Consensus 352 D~~ 354 (354) -.. T Consensus 267 t~~ 269 (275) T protein:vir:96 267 TKS 269 (275) T ss_pred Eec Confidence 666 No 123 >protein:vir:8885 Length: 347 # NCBI annotation: major capsid protein A # Family: family:all:975 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813774;genbank:gi:29366729;genbank:GeneID:1258837 Probab=96.26 E-value=0.00081 Score=37.54 Aligned_cols=302 Identities=9% Similarity=0.006 Sum_probs=127.0 Q ss_pred cccccccchhhhhhhhh-hcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDA-IGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda-~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~ 101 (354) |.+.. .+..- +..+.---.+|.-..|+....-.++... .+.-..+.++.+.+ +- +..++.+... T Consensus 1 ~a~~~-------~~~~~~~~~g~~~~~~d~~al~ie~~~geV~~~f----~~~s~~~~~~~~r~-i~-~G~sv~~~~i-- 65 (347) T protein:vir:88 1 MANAT-------GGQQIGANQGKGQSAADKLALFLKVFGGEVLTAF----VRRSVTMDKHMVRT-IQ-NGKSASFPVM-- 65 (347) T ss_pred CCCcc-------cchhhhccCCCCccccchHHHHHHHHHHHHHHHH----HHHhhhhhcccccc-cc-CcceEEEeee-- Confidence 11100 00110 0011101112222235543333444433 23334455555533 22 2445555443 Q ss_pred cCceeEec-CCCCcc--ceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeeh Q lcl|NC_020082. 102 VTMGKFIG-ANGQDL--PRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDS 178 (354) Q Consensus 102 ~G~a~~~~-~~~~di--p~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~ 178 (354) |..+.-. ..++++ |..+..-.+....|-.+ .-+..-+.+++.++ ...++-.+-.+.+..++++..|+.++--.. T Consensus 66 -G~~~~~~~~~g~~l~~~~~~~~~~~~~i~ID~~-~y~~~~Vdd~D~~q-~~~D~r~~~~~~~g~aLA~~~D~~i~~~l~ 142 (347) T protein:vir:88 66 -GRTKGYYLAPGENLDDKRKDIKHSEKVIQIDGL-LTSDVLIYDIEDAM-NHYDVRAEYSAQLGEALAIAADGAVLAEMA 142 (347) T ss_pred -cceeeeeeccccCCCCCCCCCccceEEEEEech-hhhhhhhhhHHHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4333211 112222 22233333434433332 11233446777775 456677778889999999999998863211 Q ss_pred ---------hhCceeeeecCCccceeccccc--cccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhcc Q lcl|NC_020082. 179 ---------SRGMYGLFNNPNVTLSSATKDY--KTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQL 246 (354) Q Consensus 179 ---------~~gi~GLlN~p~~~~~~~~~~w--~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~ 246 (354) ...+.|+-....+...+ +.+- ..++++.+++.|.++...|.++ .+. ....++|+|..|..|.... T Consensus 143 ~~a~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~a~~~Lde~--~VP~~gR~~vv~P~~y~~Ll~~~ 219 (347) T protein:vir:88 143 KLCNLPAASNENIAGLGQAVVLNIGA-AADLVDVEARGKAILKGLTLARARLTKN--YVPAGDRRFYCAPEDYSAILSAL 219 (347) T ss_pred HhhccccccccccCCccccccccccc-cccccchhhhHHHHHHHHHHHHHHHhhc--CCCCCCCEEEeCHHHHHHHhcch Confidence 11233432111111111 1111 2345677888899988888664 332 3479999999998887543 Q ss_pred CCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccccc-------ccCcce--------EEEEEEcCcceEEE Q lcl|NC_020082. 247 MTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGV-------SNSNKP--------RYMVYDKSDRNLAM 311 (354) Q Consensus 247 ~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~-------g~~g~d--------~~v~y~~d~~~~~~ 311 (354) .....+.....-++ + |....+-....++...+..... +..++. ..--|.-+..+..- T Consensus 220 ~~~~~~~~~~~~~~-~-------G~vg~i~G~~V~~s~nlp~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~d~~~~~~ 291 (347) T protein:vir:88 220 MPNAANYAALIDPE-T-------GNIRNVMGFEVIEVPHLTVGGAGDNNPADGVAPTNQKHIFPATATGDDRVAQNNVVG 291 (347) T ss_pred hhhhhhhccccchh-c-------ceeeeeccceEEEeecccccccccccccccccccccccccccccccccccccCcEEE Confidence 22211111111111 1 1111222222222222210000 000000 00001111111111 Q ss_pred eec----------cchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 312 ANP----------IPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 312 ~vp----------~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+- ++++.-. -.++...+.+.+.... |+-+.||.+++.+... T Consensus 292 l~~~~~a~g~v~~~d~~~e~~r~~~~~~d~i~~~~~~-G~~~~rPe~a~~~~~~ 344 (347) T protein:vir:88 292 LFNHRSAVGTVKLKDMALERARRPEFQADQIIGKYAM-GHGGLRPEAAGALVFT 344 (347) T ss_pred EEechhhhhheecccceeeeeechhhHHHHhhhhhhh-cCceeccceEEEEEeC Confidence 110 1111100 1123345566666654 6999999999777766 No 124 >protein:vir:80213 Length: 334 # NCBI annotation: capsid protein # Family: family:all:2806 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522884;genbank:gi:158345177;genbank:GeneID:5687476 Probab=96.25 E-value=0.00082 Score=37.49 Aligned_cols=296 Identities=8% Similarity=0.029 Sum_probs=125.3 Q ss_pred cccccccchhhhhhhhhhcCCccccch----hhh-hHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEe Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDA----DGG-IAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYR 97 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA----~~~-~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~ 97 (354) |. -+.+...+..+ ++. -.|+....-+|+... .+.-..+.++.+.+ + -+..++.+. T Consensus 1 m~--------------~~~~~~~t~~~~~~~~~~~~l~le~~~geV~~af----~~~s~~~~~~~~r~-i-~~G~s~~~~ 60 (334) T protein:vir:80 1 MT--------------YPAANTHTRPGWGGANSDVSLHIEEHLGLVDASF----MYSSKFASWMNVRS-L-RGTNQLRVD 60 (334) T ss_pred CC--------------CCcCCCccccccccccchheehhhhhhhHHHHHH----HHhhhhhccceeee-c-cccceEEEe Confidence 22 22112222211 111 235433223343333 23333334444332 1 123455554 Q ss_pred eecccCceeEe-cCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeee Q lcl|NC_020082. 98 SYDGVTMGKFI-GANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFG 176 (354) Q Consensus 98 ~~~~~G~a~~~-~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G 176 (354) .. |..++- -..+..+..-...-++..+-+-.. .-++.-+.+++.++ +..++-.+-.+.+..++++..|+.++-- T Consensus 61 ~i---G~~~~~~~~~g~~l~~~~~~~~~~~l~ID~~-l~~~~~VddiD~~q-~~~D~rse~~~~~G~aLA~~~D~~~~~~ 135 (334) T protein:vir:80 61 RV---GASTIAGRKAGEELVVQKNVSDKLNLTVDTV-LYARHFFDKFDEWT-SNLDVRKETAREDGIALARQYDQACIIQ 135 (334) T ss_pred ee---cceeeeeecCCCCCCCCCcccCceEEEEeee-eehhhhHhhHHHHh-cCcchHHHHHHHHHHHHHHHHHHHHHHH Confidence 33 444321 111122211111112222222210 11233456777775 5667778888899999999999977633 Q ss_pred ehh-------hCc-----eeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc--cccEEEeCHHHHHHH Q lcl|NC_020082. 177 DSS-------RGM-----YGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH--VPNTALMFPDLWNQA 242 (354) Q Consensus 177 ~~~-------~gi-----~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~--~p~~L~l~p~~~~~L 242 (354) ... ... .|......++. .+.=...+++.+++-+..+...|.++.---+ ....++|+|..|..| T Consensus 136 l~kaa~~~~~~~~~~~~~~G~~~~~~~~g---~~~~~~~~~~~l~~a~~~a~~~L~e~dvp~~~~~~R~~vv~P~~y~~L 212 (334) T protein:vir:80 136 LQKCGDFLAPAHLKPAFHDGILLPSTISG---LAADAAADADVLVAAHRQGVEAMVFRDLGDQLMSEGVTLLDPVIFSFL 212 (334) T ss_pred HHHhhhhcccccccccccCCcceeecccc---cccchhhhHHHHHHHHHHHHHHHHhcCCCCCcCCceEEEeChHHHHHH Confidence 211 111 12221111111 1111224588888888888888877522111 246999999999998 Q ss_pred hhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccc-------------cccCcceEEEEEEcCcceE Q lcl|NC_020082. 243 NNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG-------------VSNSNKPRYMVYDKSDRNL 309 (354) Q Consensus 243 ~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g-------------~g~~g~d~~v~y~~d~~~~ 309 (354) ..-.. -.+. +|.-..+......|.-..+-.++.+++..+-... .|...+ ++.++ ..++-+ T Consensus 213 l~~~r--~~n~---d~~~s~~~~~~~~g~i~~v~G~~V~~Sn~~P~~~~t~~~~g~~~~~~agd~t~-~~~~~-~~~~Al 285 (334) T protein:vir:80 213 LEHDR--LMNV---EFGAKEGGNSFVGGRIAMLNGVRVVETPRFPQSAITANALGADFNVTDAEVRR-KMITF-IPSMAL 285 (334) T ss_pred hcccc--cccc---eeccccccccccceeEEEEeceEEEeecCCCCccccccccccccccccccccc-eEEEE-EeCceE Confidence 65310 0000 1111000000112222333334444433321110 000011 11111 112222 Q ss_pred EEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 310 AMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 310 ~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...-.++++.-.- +.+...|.+.+... .|+-++||.+++.+++. T Consensus 286 ~t~~~~~~~~e~~~~~~~~~d~i~~~~a-~G~g~lRPeaa~vv~~~ 330 (334) T protein:vir:80 286 ISAQVHPVSAQFWEEKKDFGHYLDTFQS-YNIGQRRPDAVAVHDIT 330 (334) T ss_pred EEEEEeecceeeeechhhHHHHHHHHHH-cCCceeccceEEEEEEe Confidence 2222222221110 12233444444443 47999999999999999 No 125 >protein:vir:105334 Length: 276 # NCBI annotation: putative phage major capsid protein # Family: family:all:522 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950669;genbank:gi:119967839;genbank:GeneID:4643213 Probab=96.20 E-value=0.00088 Score=37.34 Aligned_cols=266 Identities=8% Similarity=0.002 Sum_probs=130.5 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) |-...+..+| .+..| .+-+-|.+.....+....+..+.+.+. ..-.++.++.+...|.++.++++ +++|... T Consensus 1 Ma~~~T~l~d----~i~Pe--v~~~~v~~~~~~~~~~~~~~~~~~~l~g~~G~ti~iP~~~~igda~~~~eg-~~i~~~~ 73 (276) T protein:vir:10 1 MAQGTTTKST----QIVPE--VLAPMMQAELDKKLRFAQFADIDSTLVGQPGDTLTFPAFVYSGDATVVPEG-QKIPVDK 73 (276) T ss_pred CCcceeehhh----hhchH--HHHHHHHHHHHhhhhhcccceecccccCCCCCEEEeeeecCCCccccccCC-CccCccc Confidence 1112233333 11221 122223333333344444444443332 23557888888888999888776 4688777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+|.+ .|++... .+.++-..-.+.+...+++..|+-++. .+ .. +... T Consensus 74 lt~~~~~a~i~~~~k~~~~--tD~a~~~-~~~dp~~~~~~~~~~~~a~~~d~~~~~---~l------~~-------~~~~ 134 (276) T protein:vir:10 74 IETNRREAKIHKIGKGTDI--TDEALLS-GYGDPQGEAVRQHGLAIANKVDNDVLE---AL------RG-------TKLT 134 (276) T ss_pred cccceeeEEeehccccccc--cHHHHHh-hccchHHHHHHHHHHHHHHHHHHHHHH---HH------hc-------cccc Confidence 8888888888887666665 4555544 355666777778888888888876541 11 10 0111 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeec Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRF 279 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~ 279 (354) ++..+. -++.|.+++..+-.. ...++.++|+|..|..|.+....+....+-. .++. ..+|.--++...+ T Consensus 135 ~~~~~~--t~d~i~~A~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~----g~~~--~~~G~ig~~~G~~ 203 (276) T protein:vir:10 135 VSADIG--TLAGLEAAIDTFDDE---DLEPMVLFINPKDAGKLRSSASDNFTRATEL----GDNI--IVKGAFGEALGAV 203 (276) T ss_pred cccccc--CHHHHHHHHHHhccc---cCcccEEEEcHHHHHHHHHhccccccccccc----cccc--eeccccceeccee Confidence 111111 146667777776442 2467899999999999964311111100000 0000 0112112222233 Q ss_pred eeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 280 QLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 280 ~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+...... .+ ..+++ .+.-+.+....+++.-.- ......-.+-.. ...|+-+.+|..++.+-.+ T Consensus 204 Vi~s~~~p------~~--t~~l~--~~gAi~~~~~~~~~vE~dRd~~~~~d~i~~~-~~y~~~~~~~~~vv~~t~~ 268 (276) T protein:vir:10 204 IVRSKKLD------EG--EAILA--KRGAVKLITKRDFFLETDRDPSTKTTALYSD-KHYVAYLYDESKAVKVTKG 268 (276) T ss_pred EEEcCCCC------cc--eEEEE--eccceeeeecCCceeecccchhhcccEEEEe-eEEEEEEEcCcceEEEecC Confidence 33222211 11 11222 222333333233221100 011112222222 3457999999999999888 No 126 >protein:vir:9704 Length: 394 # NCBI annotation: hypothetical protein # Family: family:all:21 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795466;genbank:gi:28876225;genbank:GeneID:1257769 Probab=96.12 E-value=0.00099 Score=37.06 Aligned_cols=301 Identities=8% Similarity=-0.018 Sum_probs=130.2 Q ss_pred CcccccchHH------hh-hc--------------------------cceeecCccccccccchhhhhhhhhhcC--Ccc Q lcl|NC_020082. 1 MAIKTIDAQT------IQ-GN--------------------------QWLVHKGYVSRNGDQWVINNTALDAIGN--PNV 45 (354) Q Consensus 1 ~~~~~~~~~~------~~-~~--------------------------~~~~~~~~~~~~~~~~~~~~~amda~~~--~~~ 45 (354) -.|+.++.+. ++ .. .+-......................... ... T Consensus 51 ~ei~~l~~~~~~~e~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (394) T protein:vir:97 51 ANLVEAENDLKLYESSVEVGGAENIGGKEVTQEEKTYRESVNDFIRSKGKIVNDSLRFEGKDEVLMPINETTPVEPQKDG 130 (394) T ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhhccc Confidence 0000000000 00 00 0000000000000000000000000000 000 Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccce-eeeccc Q lcl|NC_020082. 46 MLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPR-VAQSAQ 123 (354) Q Consensus 46 ~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~-v~~~~~ 123 (354) .+. +.+.+++. +.+.+.|++.....-..+.++.+.. .+.+ +..+.... ..+.+.+++..+. .|. -+...+ T Consensus 131 ~t~--~~gg~liP--~~~~~~ii~~~~~~~~l~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~v~E~~~-~~~~~~~~~~ 202 (394) T protein:vir:97 131 IKK--ENAKPVSS--EEILYTPAREVKTVVDLKPFTTVYQ-AKKA--SGKYPVLQRATTKMVTVAELEK-NPALAKPDFK 202 (394) T ss_pred ccc--ccccccCh--HHHHHHHHHHhhhhhhhhhhceeee-ccCc--ceEEEEEecCCCccceeccccc-ccccccccce Confidence 111 12334444 4567778887777777777665532 2222 23334333 3345667766543 443 335666 Q ss_pred eeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccccc Q lcl|NC_020082. 124 MHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTM 203 (354) Q Consensus 124 ~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~ 203 (354) ......+.++.-+.+|.+=|+.+ ..++..--....++++...+|+.+++|..... +.. .. T Consensus 203 ~v~l~~~k~~~~i~is~ell~ds---~~~~~~~i~~~la~~~~~~~~~~i~~g~~~~~---------------~~~--~~ 262 (394) T protein:vir:97 203 DVAWNIDTYRGAIPLSQESIDDA---DVDLVGIVSESISQIKVNTTNDAIAKVLKSFT---------------TKT--VK 262 (394) T ss_pred eEEeehhheeeehhhHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---------------ccc--cc Confidence 77777888887777776544433 34677777778888888999988887743210 111 11 Q ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeee Q lcl|NC_020082. 204 NGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDA 283 (354) Q Consensus 204 T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~ 283 (354) + +++|.++++...... ..-.++|+|..|..|..-. +..|.-++. -++ ..+.+-++...|.+.. T Consensus 263 ~----~~~~~~~~~~~~~~~----~~a~~v~n~~~~~~l~~lk--d~~G~~i~~----~~~---~~~~~~~l~G~pv~~~ 325 (394) T protein:vir:97 263 N----LDEIKALLNGGFDPA----YNVSLIVSQSFYQTLDTLK--DGNGRYLLQ----DDI---TAVSGKVLLGKPVFVL 325 (394) T ss_pred c----HHHHHHHHHhhhhhh----hCCEEEEcHHHHHHHHHhh--ccCCCeeee----cCc---CCCCCceeccceeEEe Confidence 2 345555554433211 1246999999999986532 333332211 000 1122223333333221 Q ss_pred ccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 284 AELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 284 ~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .. .. .|.+.++.-+.+ +.+.+..-..++..........-.+.++.|++ +.+.+|.+|+.+++. T Consensus 326 ~~---~~---~~~~~~~~gd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d-~~v~~~~a~~~~~~~ 388 (394) T protein:vir:97 326 SD---EV---LGANKAFIGDFK-RGVLFADRKDLGLRWADNEIYGQYLQAVLRFG-VSKVDDKAGYYVTFT 388 (394) T ss_pred cc---cc---cCCccEEEeecc-ccEEEEEecceEEEEecccccceeEEEEEEEc-cEEecccceEEEEec Confidence 11 00 111111111111 11111111122211111111122345677875 577799999999999 No 127 >protein:vir:94576 Length: 347 # NCBI annotation: Major capsid protein # Family: family:all:975 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919012;genbank:gi:119637776;genbank:GeneID:5179336 Probab=95.97 E-value=0.0012 Score=36.62 Aligned_cols=293 Identities=11% Similarity=0.052 Sum_probs=126.3 Q ss_pred hh-hhhhcCCccccc-------hhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCcee Q lcl|NC_020082. 35 TA-LDAIGNPNVMLD-------ADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGK 106 (354) Q Consensus 35 ~a-mda~~~~~~~~d-------A~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~ 106 (354) || |.. .+.+.+. +|.-..|+... .-+|.+...+.-..+.++.+.+ +- +..++.+.. .|..+ T Consensus 1 ma~~~~--~~~~~t~~g~~~~~~d~~al~ie~~----~geV~~~f~~~s~~~~~~~~rt-i~-~G~sv~~~~---iG~~~ 69 (347) T protein:vir:94 1 MANMNG--GQQMGKDQGKGMSAGDKLALFLKVF----GGEVLTAFTRTSVTMNKHLVRS-IQ-SGKSAQFPV---LGRTK 69 (347) T ss_pred CCcccc--ccccccccccCCcccchHHHHHHHH----hHHHHHHHHHHHhhhhhhhhee-cc-ccceEEeee---cccee Confidence 11 110 1111111 11112355333 3334333333344444444432 11 234555443 44444 Q ss_pred Ee-cCCCCcc--ceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee----e-e- Q lcl|NC_020082. 107 FI-GANGQDL--PRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF----G-D- 177 (354) Q Consensus 107 ~~-~~~~~di--p~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~----G-~- 177 (354) .. -..++++ |..+....+...-+=.. .-+..-+.+++.++ +..++-.+-.+.+..++++..|+.++- + . T Consensus 70 ~~~~~~G~~l~~~~~~~~~~e~~ltID~~-~y~~~~VddiD~~q-~~~D~rs~~~~~~g~ALA~~~D~~i~~~l~~~a~~ 147 (347) T protein:vir:94 70 AAYLQPGENLDDKRKDMKHTEKTINIDGL-LTADVLIYDIEDAM-NHYDVRSEYTAQLGESLAMAADGAVLAEMAKLCNL 147 (347) T ss_pred EeeeecCcCCCCCcCCccccceEEEEcch-hhhhhhhhhHHHHh-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc Confidence 32 1122222 21223333333322221 12333456788775 566777888889999999999987752 1 1 Q ss_pred ---hhhCceeeeecCCccceecccccc--ccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhccCCCCC Q lcl|NC_020082. 178 ---SSRGMYGLFNNPNVTLSSATKDYK--TMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQLMTGYT 251 (354) Q Consensus 178 ---~~~gi~GLlN~p~~~~~~~~~~w~--~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~~~~~~ 251 (354) ......|..-...+......+.+. .++++.+++.|.++..+|.++ .+. .+..++++|..|..|.+....... T Consensus 148 ~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~~~~~~d~i~~a~~~Lde~--dVP~~~R~~vv~P~~y~~LLk~~~~~~~ 225 (347) T protein:vir:94 148 PTANNENIAGLGKAHVLEVGDQATLQGDQVKLGQAIIAQLTLARAKLTGN--YVPSSDRVFYTTPDNYSAILAALMPNAA 225 (347) T ss_pred ccccccccccCCcceeEeeeccccccccccccHHHHHHHHHHHHHHhhhc--CCCCCCCEEEeChHHHHHHHHhhccccc Confidence 111122221111111111122222 246888999999999888764 343 367999999999888754322222 Q ss_pred Cc-hHHHHHHhcCceeecccccceEEeeceeeeccccccc-----cc----------------------cCcceEEEEEE Q lcl|NC_020082. 252 DR-TVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG-----VS----------------------NSNKPRYMVYD 303 (354) Q Consensus 252 ~~-Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g-----~g----------------------~~g~d~~v~y~ 303 (354) +. ++.. +. +|.-..+-..+.+++..+.... .+ +-++...+++. T Consensus 226 ~~~~~~~-~~--------~G~V~~v~G~~V~~Sn~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~d~~~~~~l~~~ 296 (347) T protein:vir:94 226 NYQALID-PS--------TGSIRNVMGFEVIEVPHLTAGGAGDNRAEEGVAPTNQKHAFPDTASGDTRVALDNVVGLFNH 296 (347) T ss_pred ccccccc-cc--------cceeEEeeceEEEEcCccccccCcccccccccccccccccccccccccccccccceEEEEec Confidence 21 2211 11 1222222223333332221110 00 00111112222 Q ss_pred cCcceEEEeeccchhcc-cccccCceeEEeeeeeeeeEEEECcceee--eeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRML-APQMASLGITVPAEYKISGTEFRYPLCAA--YVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~-~~~~~~~~~~~~~~~~~gGv~i~~P~ai~--y~D~~ 354 (354) . +-+...-.++++.- .-+.+-..+.+.+.... |+-++||++.+ ...=| T Consensus 297 ~--~A~~tv~~~~~~~e~~~~~~~~~~~i~~~~a~-G~g~~rPe~a~~i~~~~a 347 (347) T protein:vir:94 297 R--SAVGTVKLKDMALERARRANFQADQIIAKYAM-GHGGLRPEACGALVFKKA 347 (347) T ss_pred h--hhhhhhhhcccceeeeechhhhhhhhhhhhhh-cCcccccceeEEEEecCC Confidence 1 11111111111110 01223334555555554 69999998887 44444 No 128 >protein:vir:962 Length: 397 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076616;genbank:gi:13095724;genbank:GeneID:920264 Probab=95.72 E-value=0.0012 Score=36.56 Aligned_cols=307 Identities=6% Similarity=-0.045 Sum_probs=128.7 Q ss_pred CcccccchHH--hhhc---ccee---------------ecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQT--IQGN---QWLV---------------HKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQL 60 (354) Q Consensus 1 ~~~~~~~~~~--~~~~---~~~~---------------~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L 60 (354) -.|+.++.+. ++.. ..-. +.............-.-.+...............+.++.. T Consensus 68 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp-- 145 (397) T protein:vir:96 68 EKIAELQKEKQDLEDELAKAADPTDQKPKDGEKRKMKKFKVTEEELAEKRSAINAFVKSKGAEKRDGFTSVEGGALIP-- 145 (397) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhcccccccccchh-- Confidence 0011000000 0000 0000 0000000000000000000000000000001111222222 Q ss_pred HHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeec Q lcl|NC_020082. 61 AGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYT 139 (354) Q Consensus 61 ~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~ 139 (354) +.+.+.+++ .......+..+.+.. -...+..+.... ..+.+.+++..+......+...+.....++.++.-..++ T Consensus 146 ~~~~~~i~~-~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~i~~~~~~~~~~~~~s 221 (397) T protein:vir:96 146 QELLQPQLE-PKDIVDLSKYVRSVP---VNSASGKFPVISKSGSKMATVQQLEKNPQLANPKMVEIDYSVATRRGYIPIS 221 (397) T ss_pred HHHHHHHHH-hhhhhhHHHhhhhcc---ccccceeEEEEeccCCccccccccccccccccccccceeecHhHhhcchhhH Confidence 345556665 233334444443321 122233334333 234445565554432234455666677777777766776 Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 140 LDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSV 219 (354) Q Consensus 140 ~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l 219 (354) .+=|+.+ ..++..--....++++...+|..++.|.....-.|. .| +++|.+++... T Consensus 222 ~ell~ds---~~~l~~~i~~~l~~~~~~~~~~~i~~g~g~~~~~~~-----------------~~----~d~~~~~~~~~ 277 (397) T protein:vir:96 222 QEMIDDA---SYDVTGLIADEIQDQSLNTKNADIAAVLKTATAKSV-----------------VG----VDGLKDLINKE 277 (397) T ss_pred HHHHhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-----------------cc----hHHHHHHHHHh Confidence 6555543 335666677788888999999988888653221111 12 34555555443 Q ss_pred HHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEE Q lcl|NC_020082. 220 INLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRY 299 (354) Q Consensus 220 ~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~ 299 (354) ... +. .-.++|+|+.|..|..- .+..|.-++. -++ ..+.+-++...|......... + ...|+..+ T Consensus 278 ~~~--~~--~a~~v~n~~~~~~l~~l--kd~~G~~~~~----~~~---~~~~~~~l~G~pv~~~~~~~~-~-~~~~~~~~ 342 (397) T protein:vir:96 278 IKK--VY--DVKLFISASMYSELDKL--KDKNGRYLLQ----DSI---TAASGKQLLGKEVVVLDDDVI-G-KSVGNVVG 342 (397) T ss_pred hhh--hc--CcEEEEcHHHHHHHHHh--hccCCCeEec----cCc---cCCCcccccccceEEeccccc-C-CCCCceEE Confidence 322 11 24799999999999653 2444432221 010 122223344444433222111 1 11233332 Q ss_pred EEEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 300 MVYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 300 v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.-+.+ +.+.+..-+.+++..........-+..+.|++ +.+++|.+|+++-+. T Consensus 343 ~~gd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d-~~~~~~~a~~~~~~~ 395 (397) T protein:vir:96 343 FIGDAK-AFASFFDRKQVSVSWVDNNIYGQLLAGIIRYD-VKATDKKAGFYVTFT 395 (397) T ss_pred EEeehh-cceEeEeecceEEEEecccccceeEEEEEEEc-cEEecccceEEEEee Confidence 222222 22223323334433322222234455667876 577899999998877 No 129 >protein:vir:3158 Length: 321 # NCBI annotation: capsid protein gpE # Family: family:all:1377 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665929;genbank:gi:22091115;genbank:GeneID:951342 Probab=95.66 E-value=0.0017 Score=35.81 Aligned_cols=292 Identities=10% Similarity=-0.021 Sum_probs=130.3 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccc-cchhhhhHHHH--HHHHHHHHHHHHhhhccccc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVM-LDADGGIAFYI--SQLAGIEATVYETPYGDITY 77 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~-~dA~~~~~fl~--~~L~~id~~v~e~~~~~l~~ 77 (354) |+-|+++.- ++ .++. + ..+. .+++.+ |+. ...+.|-..+.+. .+-+.. T Consensus 1 ~~~k~~~~~-l~---------------------~~~~-~---~~~~~~~~~~g--~~v~~~~~~~l~~~i~e~-s~~l~~ 51 (321) T protein:vir:31 1 MASRTINND-LS---------------------RITE-K---NALTVDDLDAG--GTLPDPLWDEFWTDMIEE-TPLLDA 51 (321) T ss_pred CchHHHHHH-HH---------------------HHHH-h---ccccccccCCc--ceeCHHHHHHHHHHHHHh-hhhhhh Confidence 555555431 00 0111 0 0111 111222 222 1112333333331 222233 Q ss_pred hhhccccCCCCCceeeEEEeeecccCceeEecCC-CCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchH Q lcl|NC_020082. 78 RSDVPMAANIPEYADTWMYRSYDGVTMGKFIGAN-GQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAE 156 (354) Q Consensus 78 r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~-~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~ 156 (354) .+.+++.... ..+ ......+.+-+.+.. ....+..+...+......+.......++++-|+..+ .+.++... T Consensus 52 i~v~~v~~~~----~~i--~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~k~~~~~~it~e~L~d~a-~~~d~e~~ 124 (321) T protein:vir:31 52 IRTETVGAKK----TRI--PTLNIGERHRRPQDEGEWNENESDVSTGTIDISTEKATVAWDLPREVVQENP-EGEALADR 124 (321) T ss_pred ceeeeccCcc----eee--eeeccCCcccccccccccccccccceeeeeeeeeEEEEeehhccHHHHHhhh-cchhHHHH Confidence 3344442211 111 111111111122211 112223344455666778888888888887776654 35678888 Q ss_pred HHHHHHHHHHHHhhheeeeeehhhCc------eeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCccccc Q lcl|NC_020082. 157 QARLAFRGAEEHSQSVAYFGDSSRGM------YGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPN 230 (354) Q Consensus 157 k~~aA~~~~~~~~n~~~f~G~~~~gi------~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~ 230 (354) -....+++++..++++.|+|+....- .|+++...-... ..++...+. -.+.+.+++..|-.. +...+. T Consensus 125 i~~~ia~~~a~~~~~~~~nGd~~~~~~~~~~n~G~l~~a~~~~~--~~~~~~~~~--~~d~l~~l~~~l~~~--yr~~~~ 198 (321) T protein:vir:31 125 ILNLMTDAWSADVEDLAANGDEDAEDSFENQNDGFITVAEGDVE--TIDAADDIL--DNDLVIRTIAGLDSK--YRARMN 198 (321) T ss_pred HHHHHHHHHHHHHHhheeeccccCCCcccccchhhhhhhccccc--ccccccccc--CHHHHHHHHHhccHh--HhcCCC Confidence 88999999999999999999865443 466654321111 111211111 124455555555332 333343 Q ss_pred -EEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceE Q lcl|NC_020082. 231 -TALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNL 309 (354) Q Consensus 231 -~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~ 309 (354) ..+|+++.+..+.......+++ +++-...+ +.+.++...|......+.. +.+++ -+.+|+ T Consensus 199 ~v~im~~~~~~~~~~~l~~~~~~--~~~~~l~~-------~~~~tl~G~pvv~~~~mP~--------~~il~--t~~~nl 259 (321) T protein:vir:31 199 PALIVSEDQLLSYHYTLTDRDTP--LGDNVIMG-------EADVNPFSFPIIGSGLWPD--------DKAMF--TDPQNL 259 (321) T ss_pred eEEEechHHHHHHHHHHhcCCCc--cccchhhc-------cccccccceeEEEcCCCCC--------CcEEE--eccccE Confidence 6779998876654433222222 11111111 2223344444443332211 11222 235555 Q ss_pred EEeeccchhc--ccc--c--ccCceeEEeeeeeeeeEEEECcceeeeee-cC Q lcl|NC_020082. 310 AMANPIPFRM--LAP--Q--MASLGITVPAEYKISGTEFRYPLCAAYVD-MA 354 (354) Q Consensus 310 ~~~vp~~~~~--~~~--~--~~~~~~~~~~~~~~gGv~i~~P~ai~y~D-~~ 354 (354) .+.+-...+. ..- + .+...+..-++..+ +..|..+.+++.+. |- T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ve~~~a~a~~~~i~ 310 (321) T protein:vir:31 260 IYALYRDLEIDVLTESDKVSERDLHARYFMRGDD-DFAIENTEAVVLAEGLG 310 (321) T ss_pred EEEEeeccEEEEeecCccccccceeeEeeeeeec-ceeEeccccEEEEecCC Confidence 4444333322 211 1 12234444444454 46677788888876 44 No 130 >protein:vir:96262 Length: 274 # NCBI annotation: ORF013 # Family: family:all:522 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240311;genbank:gi:66395978;genbank:GeneID:5133339 Probab=95.51 E-value=0.0019 Score=35.46 Aligned_cols=265 Identities=7% Similarity=-0.013 Sum_probs=127.5 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) +....+.-+|- +..| -+.+.+.+.....+....+..+..... ....++..+.+...|.++.+.+. ++++.-. T Consensus 1 m~~~~T~l~d~----i~Pe--v~~~~v~~~~~~~l~~~~~~~~~~~l~g~~G~tv~iP~~~~ig~a~~~~~g-~~i~~~~ 73 (274) T protein:vir:96 1 MAQGMTKLTNQ----IVPE--VLAPMMQAELEKKLRFASFAEIDNTLVGQPGDTLTFPAFIYSGDAKVVAEG-EKIPTDI 73 (274) T ss_pred CCcceeehhhe----echH--HHHHHHHHHHHhhhhccccceecccccCCCCCEEEeeeecCCCccccccCC-Cccchhh Confidence 22233333331 1221 112222333334444444443333211 12367888888888999887664 5787777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+|.+ .|++..+. +.++-..-.+.+...+++..|+.++- .++ + . ... T Consensus 74 lt~~~~~~~i~~~~~a~~i--~D~~~~~~-~~d~~~~~~~~~~~~~a~~vd~~i~~---~l~--~----a-------~~~ 134 (274) T protein:vir:96 74 LETKKREAKIRKIAKGTSI--SDEALLSG-YGDPQGEQVRQHGLAHANKVDDDVLE---ALK--S----A-------KLT 134 (274) T ss_pred cccceeEEEeeeeecceee--hHHHHhhc-cchHHHHHHHHHHHHHHHHHHHHHHH---HHh--c----c-------ccc Confidence 7777788888776555544 57666654 44555667778888888888776541 111 0 0 001 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH-HHHHHhcCceeecccccceEEee Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV-MQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv-l~~l~~n~~~~~~~g~~l~I~~~ 278 (354) +++++. -++.|.++..+|-.. ...+..|+|+|..+..|.+...-.....|- -+=+..|+.+- ++... T Consensus 135 ~~~~~~--~~d~i~~A~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~g~~~~~~G~ig-------~~~G~ 202 (274) T protein:vir:96 135 VEADIT--KLTGLQTAIDKFNDE---DLEPMVLFISPLDAGKLRGDATTNFTRATELGDDVIVKGAFG-------EALGA 202 (274) T ss_pred cccccc--CHHHHHHHHHHhccc---cccccEEEeCHHHHHHHHhhccccccccccccccceeccccc-------eecCe Confidence 111111 156677777776432 246789999999999997632100000000 00011122221 22222 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.+...... .++ .+++. +.-+.+....+++.-.- .+....-.+. .-...|+-+.+|..++.+--. T Consensus 203 ~Vi~s~~~~------~~t--~~l~~--~gA~~~~~~~~~~vE~~Rd~~~~~d~i~-~~~~y~~~~~~~~~~v~~tk~ 268 (274) T protein:vir:96 203 VIVRSNKLE------AGT--AILAK--KGAVKLITKRDFFLETDRDPSTKTTALY-SDKHYVAYLYDESKAVKITKG 268 (274) T ss_pred EEEEeCCCC------Cce--EEEEe--ccceeeeecCCcccccccccccccCEEE-EeEEEEEEEEcCCcEEEEEcC Confidence 222222111 011 11111 22222222222221100 0111122222 224568999999999998777 No 131 >protein:vir:95898 Length: 274 # NCBI annotation: ORF014 # Family: family:all:522 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240385;genbank:gi:66396054;genbank:GeneID:5133409 Probab=95.51 E-value=0.0019 Score=35.46 Aligned_cols=265 Identities=7% Similarity=-0.013 Sum_probs=127.5 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) +....+.-+|- +..| -+.+.+.+.....+....+..+..... ....++..+.+...|.++.+.+. ++++.-. T Consensus 1 m~~~~T~l~d~----i~Pe--v~~~~v~~~~~~~l~~~~~~~~~~~l~g~~G~tv~iP~~~~ig~a~~~~~g-~~i~~~~ 73 (274) T protein:vir:95 1 MAQGMTKLTNQ----IVPE--VLAPMMQAELEKKLRFASFAEIDNTLVGQPGDTLTFPAFIYSGDAKVVAEG-EKIPTDI 73 (274) T ss_pred CCcceeehhhe----echH--HHHHHHHHHHHhhhhccccceecccccCCCCCEEEeeeecCCCccccccCC-Cccchhh Confidence 22233333331 1221 112222333334444444443333211 12367888888888999887664 5787777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+|.+ .|++..+. +.++-..-.+.+...+++..|+.++- .++ + . ... T Consensus 74 lt~~~~~~~i~~~~~a~~i--~D~~~~~~-~~d~~~~~~~~~~~~~a~~vd~~i~~---~l~--~----a-------~~~ 134 (274) T protein:vir:95 74 LETKKREAKIRKIAKGTSI--SDEALLSG-YGDPQGEQVRQHGLAHANKVDDDVLE---ALK--S----A-------KLT 134 (274) T ss_pred cccceeEEEeeeeecceee--hHHHHhhc-cchHHHHHHHHHHHHHHHHHHHHHHH---HHh--c----c-------ccc Confidence 7777788888776555544 57666654 44555667778888888888776541 111 0 0 001 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchH-HHHHHhcCceeecccccceEEee Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTV-MQHFMEANSYTLLTGNELDIQIR 278 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tv-l~~l~~n~~~~~~~g~~l~I~~~ 278 (354) +++++. -++.|.++..+|-.. ...+..|+|+|..+..|.+...-.....|- -+=+..|+.+- ++... T Consensus 135 ~~~~~~--~~d~i~~A~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~f~~~s~~g~~~~~~G~ig-------~~~G~ 202 (274) T protein:vir:95 135 VEADIT--KLTGLQTAIDKFNDE---DLEPMVLFISPLDAGKLRGDATTNFTRATELGDDVIVKGAFG-------EALGA 202 (274) T ss_pred cccccc--CHHHHHHHHHHhccc---cccccEEEeCHHHHHHHHhhccccccccccccccceeccccc-------eecCe Confidence 111111 156677777776432 246789999999999997632100000000 00011122221 22222 Q ss_pred ceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 279 FQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 279 ~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.+...... .++ .+++. +.-+.+....+++.-.- .+....-.+. .-...|+-+.+|..++.+--. T Consensus 203 ~Vi~s~~~~------~~t--~~l~~--~gA~~~~~~~~~~vE~~Rd~~~~~d~i~-~~~~y~~~~~~~~~~v~~tk~ 268 (274) T protein:vir:95 203 VIVRSNKLE------AGT--AILAK--KGAVKLITKRDFFLETDRDPSTKTTALY-SDKHYVAYLYDESKAVKITKG 268 (274) T ss_pred EEEEeCCCC------Cce--EEEEe--ccceeeeecCCcccccccccccccCEEE-EeEEEEEEEEcCCcEEEEEcC Confidence 222222111 011 11111 22222222222221100 0111122222 224568999999999998777 No 132 >protein:vir:739 Length: 231 # NCBI annotation: major structural protein 4 # Family: family:all:522 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108716;genbank:gi:13487838;genbank:GeneID:920884 Probab=95.15 E-value=0.0026 Score=34.71 Aligned_cols=228 Identities=8% Similarity=-0.003 Sum_probs=118.9 Q ss_pred cCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHH Q lcl|NC_020082. 84 AANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFR 163 (354) Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~ 163 (354) .. +=..-.++.++.| .|.++.++++ +.+|......+.....+.+.+.+|+++ |++.....|-|+ .+-....+. T Consensus 1 ~~-~~~~Gdtit~P~~--iGda~~v~eG-~~i~~~~l~~t~~~atIk~~gk~~~it--D~a~l~~~gDp~-~ea~~Q~~~ 73 (231) T protein:vir:73 1 EN-GINLANLCEYPND--IGDAADVAEG-GEISLDKIGTTTKSVTIKKAAKGTEIT--DEAALSGYGDPI-GESNKQLGL 73 (231) T ss_pred Cc-cccCCceEEeccc--ccchhhhcCC-CcCChhhccccceeeeEeeeccceeee--HHHHhhccCchH-HHHHHHHHH Confidence 22 2223346777765 7888888776 447877788888899999988888885 445554456554 555566666 Q ss_pred HHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHh Q lcl|NC_020082. 164 GAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQAN 243 (354) Q Consensus 164 ~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~ 243 (354) .++.+.|.=++ +.+. ++.|..+++. -++.|++++..+-.. ...|+.++|+|..+..|- T Consensus 74 ~iA~kvD~di~---~~~~---------------~a~l~~~~~~-t~d~i~~A~~~fgde---~~~~~vivv~p~~~~~Lr 131 (231) T protein:vir:73 74 SLANKVDDDLL---KAAK---------------TTSQTVSTKA-NVDGVQAALDIFNDE---DAQAYVLIVNPKDAAKIR 131 (231) T ss_pred HHHHhhhHHHH---Hhhc---------------cccccccccc-cHHHHHHHHHHhccc---cccceEEEEcchHHHhhh Confidence 77666666433 1110 1112222221 267778888887542 357889999999999983 Q ss_pred hccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc- Q lcl|NC_020082. 244 NQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP- 322 (354) Q Consensus 244 ~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~- 322 (354) + - .+.... -... .+++ ..+|.--++..++.+.+.... .|+....-|-..+.-+.+..-.+++.-+- T Consensus 132 k-~-~~~~~~--~~~~-g~~i--~~~G~iG~i~G~~Vi~S~~~~------~~~~~~~~~i~~~gAl~~~~k~~~~vEtdR 198 (231) T protein:vir:73 132 K-D-ANAKNI--GSEV-GANA--LINGTYADVLGAQIVRSKKLA------EGSALMFKIVSNSPALKLVLKRGVQVETDR 198 (231) T ss_pred h-c-cchhhh--hhhh-ccce--eeecccceEcceEEEEcCCCC------CCceeeeeEEeeccceeeeecccceeeccc Confidence 2 1 111110 0000 0111 123433444444444433221 12122222211222232222222221110 Q ss_pred cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 323 QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 323 ~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ........+ +.-...+|-+++|..++.+-++ T Consensus 199 d~~~k~~~i-~~~~~y~v~l~~~~~vv~~t~~ 229 (231) T protein:vir:73 199 DIVTKTTVI-TADEHYAAYLYDLTKVVNITFT 229 (231) T ss_pred cccccccEE-EEeEEEEEEEEcCccEEEEEee Confidence 011112222 2233468999999999999998 No 133 >protein:vir:1383 Length: 421 # NCBI annotation: major capsid protein # Family: family:all:21 # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612835;genbank:gi:20065969;genbank:GeneID:935826 Probab=94.93 E-value=0.0032 Score=34.29 Aligned_cols=307 Identities=9% Similarity=0.015 Sum_probs=135.2 Q ss_pred Cccccc-------chHHhhh-ccceeecCccccccccch-hhhh---hh-hhhc-------CCccccchhhhhHHHHHHH Q lcl|NC_020082. 1 MAIKTI-------DAQTIQG-NQWLVHKGYVSRNGDQWV-INNT---AL-DAIG-------NPNVMLDADGGIAFYISQL 60 (354) Q Consensus 1 ~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~---am-da~~-------~~~~~~dA~~~~~fl~~~L 60 (354) -.|+.+ .++.-+. +.--...+......+... .... +. ..+. ..+..+.++ +.+++. T Consensus 52 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ra~~t~~~--gg~liP-- 127 (421) T protein:vir:13 52 ARMEIIEEEIESVMTAIDEERKNTNFTGGRVIINGDSKEEKRSLQLSAMSKTIRGIQLSEEERDIMSSTN--NGAVIP-- 127 (421) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHhhhccchhHHHhhccccCC--cceecc-- Confidence 000000 0000000 000000000000000000 0000 00 0000 011122222 234444 Q ss_pred HHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecH Q lcl|NC_020082. 61 AGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTL 140 (354) Q Consensus 61 ~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~ 140 (354) +.+.+.|++........+.++.+.. ...+.-.+.+........+.+++.. ..+|..+...+.....++.++.-+.+|. T Consensus 128 ~~~~~~Ii~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~-~~~~~s~~~f~~i~~~~~k~~~~v~iS~ 205 (421) T protein:vir:13 128 QEFVNEFEKLKEGYPSLKEHCHVIP-VNRNAGKMPVRAGASVDKLANLAKD-TELVKAMLKTQPMAYDIDDYGLLAPIDN 205 (421) T ss_pred hhhHHHHHHHHHhhhhhhhhceeee-ccCCceEEEEeecCCccceeecccc-ccccccccceeEEEeeeeeeEeehhhhH Confidence 4566778777777777777665532 2222223333332223333444444 3466666777777888888888888876 Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHH Q lcl|NC_020082. 141 DEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVI 220 (354) Q Consensus 141 ~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~ 220 (354) .=|+.+ ..++..--....++++..++|.-+.. ...|+++.+++ . + +++|.++++++. T Consensus 206 ell~ds---~~~l~~~i~~~la~~~~~~~~~~i~~-----~~~g~~~~~~~------~-----~----~d~i~~~~~~l~ 262 (421) T protein:vir:13 206 SLLEDS---EINFLEFVNEEFAEFAVNTENAEIVK-----QAKAVLAEETI------N-----D----YAGLVKTINSLV 262 (421) T ss_pred HHHhhh---HHHHHHHHHHHHHHHHHHHhhhhHhh-----hhhhccccccc------c-----c----hHHHHHHHHHhh Confidence 555443 33555556666777777777755432 23455433321 1 1 467777877775 Q ss_pred HHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEE Q lcl|NC_020082. 221 NLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 221 ~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v 300 (354) .. ...+..++|+|..|..|.+. -+..+.=++.-+ ..+.+-++...|......... +.++.. .+ T Consensus 263 ~~---~~~~a~~v~n~~~~~~l~~l--kd~~G~~i~~~~--------~~~~~~tl~G~pV~~~~~~~~---~~~~~~-~~ 325 (421) T protein:vir:13 263 PN---ARKRAIIVTNSDGRAYLDGL--MDKQGRPLLKEL--------SDGGDLVFKGRPVIELEESIF---DVGDET-KF 325 (421) T ss_pred hh---hcCCCEEEEcHHHHHHHHHh--hcCCCceeecCc--------CCCCCceecceeeEEeccccc---cCCCce-EE Confidence 42 23456899999999999753 244443222111 112233444444443332211 112222 23 Q ss_pred EEEcCcceEEEeeccchhccccc-cc--CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAPQ-MA--SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~~-~~--~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|-+-.+.+.+..-..+++.... .. .-.+.+.+..|++|. +..|.++..+-+. T Consensus 326 ~~gd~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~r~~~r~d~~-~~~~~a~~~~~~~ 381 (421) T protein:vir:13 326 IVSDFKTLIKFMDRKQYLIDQSKEAGYTKNETIARIIERFDVN-SPLDKSSDAEKIR 381 (421) T ss_pred EEEeccccEEEEEecceEEEeecccccccCeeEEEEEeeecce-eecchhhheeeec Confidence 33222233434333444433221 11 112455567777544 4445555444433 No 134 >protein:vir:8843 Length: 317 # NCBI annotation: major head protein # Family: family:all:3919 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775251;genbank:gi:27476049;genbank:GeneID:2700597 Probab=94.93 E-value=0.0032 Score=34.29 Aligned_cols=284 Identities=12% Similarity=0.034 Sum_probs=134.6 Q ss_pred hcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 40 IGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 40 ~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) +..|+.++.... -..+=+.+...|+..--.+.-..+++. +.......+.|...+....++..-..+.|.|... T Consensus 1 ma~~~~~~~t~~----~~g~~~dl~~~I~~isp~dTPf~S~i~---~~~a~~~~~~W~~d~l~~~~~~~~~EG~da~~~~ 73 (317) T protein:vir:88 1 MATPTNAVSTVE----INGKREDLIDIIYNIAPYDTPFMSAIG---KGVATAITHEWQTDELRQPGKNTRVEGEDATIKA 73 (317) T ss_pred CCccccceEeee----eeeeeechhhhheecCCccCcceeeec---CceecccEEEEEeeecCCccccccccCccccccc Confidence 223444332210 111112233334332111111112222 1222223333333332222221111222223222 Q ss_pred eccc---eeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehh---------hCceeeee Q lcl|NC_020082. 120 QSAQ---MHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSS---------RGMYGLFN 187 (354) Q Consensus 120 ~~~~---~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~---------~gi~GLlN 187 (354) .... .-...|++-...+..+.+-...+. ..+........+...+.+.+++..++|.+. ..+-||++ T Consensus 74 ~~~r~~~~N~tQIf~k~v~VSgTa~av~~~G--~~~ela~q~~kk~~EikrdmE~~li~g~~a~~~~~~t~~r~~~Gl~~ 151 (317) T protein:vir:88 74 GSFTTMLNNYCQISDETLQVTGTADRVKKAG--RKNELAYQLAKKSKELKLDMEYALVGAPQAKVQRNTTTPGQMANIFA 151 (317) T ss_pred ccCCEEeccEEEEEEeEEEEeehhhhhhhcC--ccchhHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCccchhhhhHHH Confidence 1111 123367776666676666654442 245556666777888888899999998642 23556654 Q ss_pred c---------CCc-cceeccccccccCHHHH-HHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHH Q lcl|NC_020082. 188 N---------PNV-TLSSATKDYKTMNGQEL-FNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVM 256 (354) Q Consensus 188 ~---------p~~-~~~~~~~~w~~~T~~ei-~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl 256 (354) . +|. ++...+..|...|+..+ -++|++++.++|.. | -.|..+.++|..-..|+.-. .+.... +. T Consensus 152 ~i~t~~~~~~~g~~~~~~~~~~~t~~t~~~lte~~l~~~l~~i~~~--G-g~~~~i~v~a~~k~~i~~~~-~~~~~~-i~ 226 (317) T protein:vir:88 152 YYKTNGSLGANGVAPVGDGSNTGTAGDLRLLTEDMLLNASESIWRN--G-GQANSIQTSSSIKKAISKNM-KGRATE-IT 226 (317) T ss_pred HhccCceeccCccccccCCCccccccccccccHHHHHHHHHHHHhc--C-CCCCEEEeChHHHHHHHHHh-cCCcee-EE Confidence 3 111 11223344544443333 25688999999975 3 36788999998887776431 111100 00 Q ss_pred HHHHhcC------ceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccCceeE Q lcl|NC_020082. 257 QHFMEAN------SYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMASLGIT 330 (354) Q Consensus 257 ~~l~~n~------~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~ 330 (354) ..-.++- .+.. .+-.+.|...+++ ..+.++++ |++.+++.+-.|+..-+.-.-+-+-+ T Consensus 227 ~~~~~~~~g~~v~~~~t-dfG~v~ii~~r~l-------------p~~~~~~~--D~~~~~l~~Lr~~~~e~laKtGd~~k 290 (317) T protein:vir:88 227 LDASDNRIAQTVDVYES-DFGKYTIRANRWF-------------HENTLFVF--DPKMHSLCYLRPFFQHELAKTGDSEK 290 (317) T ss_pred EcccCeEEEEEEEEEEe-CCeEEEEEeCCCC-------------CCCeEEEE--cccccceeecccceeeccCCCcccce Confidence 0000000 0000 1112233333332 12344554 58888888877776666555555545 Q ss_pred EeeeeeeeeEEEECcceeee-eecC Q lcl|NC_020082. 331 VPAEYKISGTEFRYPLCAAY-VDMA 354 (354) Q Consensus 331 ~~~~~~~gGv~i~~P~ai~y-~D~~ 354 (354) .-.+.. .|++++-|.+.+. .|++ T Consensus 291 ~~i~~E-~tLe~~N~~a~a~i~~l~ 314 (317) T protein:vir:88 291 RQLLVE-YTFRVNNEKSGALIRDVV 314 (317) T ss_pred eEEEEE-EEEEEcCccceeEEEEec Confidence 444444 4699999999888 4555 No 135 >protein:vir:1239 Length: 274 # NCBI annotation: similar to phage B1 major head protein # Family: family:all:522 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510938;genbank:gi:17426272;genbank:GeneID:927376 Probab=94.90 E-value=0.0032 Score=34.24 Aligned_cols=263 Identities=8% Similarity=0.005 Sum_probs=125.0 Q ss_pred cCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCC-CceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 41 GNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIP-EYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 41 ~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~-~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) +....+..+|--.+ +.+.+-+.+.....+....+..+...+. -.-.++..+.+...|.++.+.+. ++++.-. T Consensus 1 ma~~~T~l~d~iiP------ev~~~~v~~~~~~~l~~~~~~~~d~~l~g~~G~tv~iP~~~~ig~a~~~~~g-~~i~~~~ 73 (274) T protein:vir:12 1 MAQGLTKTSNQIIP------EVLAPMMQAQLEKKLRFASFAEVDSTLQGQPGDTLTFPAFVYSGDAQVVAEG-EKIPTDI 73 (274) T ss_pred CCcceeehhhhhch------HHHHHHHHHHHHhhhhhcccceecccccCCCCCEEEEeeecCCCccccccCC-Cccchhh Confidence 22233444442221 1122222333333344444444443322 13557888888888999887664 5688777 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKD 199 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~ 199 (354) ...+.....+...+.+ |.+.|++..+..+ ++-....+.+...+++..|+-++.-... .+. +.. . T Consensus 74 lt~~~~~~~i~~~~~~--~~i~D~~~~~~~~-d~~~~~~~q~~~~~a~~vd~~~l~~~~~--------a~~-~~~--~-- 137 (274) T protein:vir:12 74 LETKKREAKIRKIAKG--TSITDEALLSGYG-DPQGEQVRQHGLAHANKVDNDVLEALMG--------AKL-TVN--A-- 137 (274) T ss_pred cccceeeEEeeeecce--eeecHHHHHhccc-chHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccc-ccc--c-- Confidence 7788888888776555 4556666665444 4446667777778888877755422111 000 100 0 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccC---CCCCCchHHHHHHhcCceeecccccceEE Q lcl|NC_020082. 200 YKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLM---TGYTDRTVMQHFMEANSYTLLTGNELDIQ 276 (354) Q Consensus 200 w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~---~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~ 276 (354) +++ -++.|.+++.+|-.. ...+..|+|+|..+..|.+... ...+... .. +..++.+- ++. T Consensus 138 --~a~---~~d~i~dA~~~lgd~---~~~~~~ivv~p~~~~~L~k~~~~~fv~~s~~g-~~-~~~~G~ig-------~~~ 200 (274) T protein:vir:12 138 --DIT---KLNGLQSAIDKFNDE---DLEPMVLFINPLDAGKLRGDASTNFTRATELG-DD-IIVKGAFG-------EAL 200 (274) T ss_pred --ccc---CHHHHHHHHHHhccc---cccccEEEeCHHHHHHHHhhhhhhcccccccc-cc-ceecccce-------eec Confidence 111 155667777766432 2467899999999999975321 1111100 01 11122221 122 Q ss_pred eeceeeeccccccccccCcceEEEEEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 277 IRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 277 ~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+.+...... .++ .+++ .+.-+.+....+.+.-.- .+....-.+. .-...|+-+.+|..++.+--+ T Consensus 201 G~~Vi~s~~~p------~~t--~~l~--~~gA~~~~~~~~~~vE~~Rd~~~~~d~i~-~~~~y~~~~~~~~~vv~~t~~ 268 (274) T protein:vir:12 201 GAIIVRSNKLE------AGT--AILA--KKGAVKLILKRDFFLEVARDASTKTTALY-SDKHYVAYLYDESKAVKITKG 268 (274) T ss_pred CeeEEEeCCCC------cce--EEEE--eccceeeeecCCceeccccchhhcccEEE-eeeEEEEEEEcCCceEEEEcC Confidence 22222222110 011 1111 112222222222221000 0011111221 223457888889888887777 No 136 >protein:vir:78739 Length: 332 # NCBI annotation: major capsid protein # Family: family:all:975 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285448;genbank:gi:148724482;genbank:GeneID:5220210 Probab=94.38 E-value=0.0046 Score=33.40 Aligned_cols=299 Identities=8% Similarity=-0.032 Sum_probs=129.0 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.-+. +...++-+-.... +..-|++ -..|+....-.|+.+. ...-..+.++.+.+- - +..++.+.... . T Consensus 1 ~~~~~-~~~~~~~~~~~~~--~~~~d~~-~al~le~~~geV~~~f----~~~s~~~~~~~~r~i-~-~G~tv~i~~ig-~ 69 (332) T protein:vir:78 1 MTTLS-NFSLPNQANGGAR--NADYDVR-YATALKLFSGEVFTAF----NNASIFKGLVRSYDL-R-GGKSKQFMFTG-K 69 (332) T ss_pred Ccccc-cccCCccccCCcc--ccccccc-hhhhhhhhhhhHHHHH----HHHhhhhhccccccc-c-ccceEEEEecc-c Confidence 22111 1111111111111 1111211 1245533333444433 223333344433221 1 34455555442 2 Q ss_pred CceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee----e-e Q lcl|NC_020082. 103 TMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF----G-D 177 (354) Q Consensus 103 G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~----G-~ 177 (354) ..++.+..+.+-.|..+++-.+....+=. ..-+..-+.+++.++ ...++-.+-.+.+..++++..|+.++- + . T Consensus 70 ~~~~~~~~g~~l~~~~~~~~~~~~l~ID~-~ky~~~~VddiD~~q-~~~dl~~~~~~~~g~aLA~~~D~~i~~~l~~aa~ 147 (332) T protein:vir:78 70 LSAGYHTPGTPIVGDAGIKANEKTLVMDD-LLVSSQFVYSLDEIF-SQYSTRAEVSKQIGEALATHYDERIARVLAKASA 147 (332) T ss_pred eeEeeecCCCCCCCCCCCCCceEEEEEeh-hhhhHHHHHhHHHHh-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhc Confidence 22232322222122223333333333322 122344557888876 456788888999999999999987763 1 1 Q ss_pred hhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCccc-ccEEEeCHHHHHHHhhc---cC-C-CCC Q lcl|NC_020082. 178 SSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHV-PNTALMFPDLWNQANNQ---LM-T-GYT 251 (354) Q Consensus 178 ~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~-p~~L~l~p~~~~~L~~~---~~-~-~~~ 251 (354) ......|......+. .+++ .+.+++.+++-|.++..+|.++ .+.. -..++|+|..|..|.+. ++ + +.. T Consensus 148 ~~~~~~~~~g~~~~~-~~~~---~~~~~~~~~~~i~~a~~~Lde~--~VP~~gR~~vv~P~~y~~Ll~~~d~~~~n~~~~ 221 (332) T protein:vir:78 148 EASPVTGEPGGFHVN-IGAG---NTNDAQAIVDGFFEAAAVLDER--SAPQEGRVAVLSPRQYYSLISSVDTNILNREIG 221 (332) T ss_pred ccCcccccccccccc-cCCc---cccCHHHHHHHHHHHHHHHhhc--CCCccCCEEEeCHHHHHHHHhhcCceeeeeecc Confidence 111222211111111 1111 1346889999999999998764 3321 14788999999998751 11 1 111 Q ss_pred C--chHHHHHHhcCceeecccccceEEeeceeeeccccccc------cccC----------cceEEEEEEcCcceEEEee Q lcl|NC_020082. 252 D--RTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG------VSNS----------NKPRYMVYDKSDRNLAMAN 313 (354) Q Consensus 252 ~--~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g------~g~~----------g~d~~v~y~~d~~~~~~~v 313 (354) + .++. +.- .--.+-..+.+++..+.... .+.. .+...++| .++-+.... T Consensus 222 ~~~~~~~-----~g~------~i~~i~G~~V~~Sn~lp~~~g~~~~~~~~~~~~n~~~~~~~~~~~~~~--h~~a~~~v~ 288 (332) T protein:vir:78 222 NSQGDMN-----SGK------GLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIF--HREAAGCIQ 288 (332) T ss_pred cccccee-----cce------eeeEEeeeEEEecCccccCcccccccccccccccccccccccceEEee--cccceeeee Confidence 1 1111 000 00122223333333321110 0000 11112222 233333333 Q ss_pred ccchhcccc----cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 314 PIPFRMLAP----QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 314 p~~~~~~~~----~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .++++.--. ..+.....+..... .|+-+.||.+++-+==| T Consensus 289 ~~~~~~~~t~~~~~~~~~~d~i~~~~~-~G~~v~rPe~~v~l~~a 332 (332) T protein:vir:78 289 SVAPTIQTTSGDFNVQYQGDLIVGKLA-MGCGSLRTSVAGSFQAA 332 (332) T ss_pred eeccchhhhhcccchhhhHhhhhhhhh-hcCceecccceEEEeeC Confidence 333322111 12222334444444 46899999999998888 No 137 >protein:vir:95107 Length: 270 # NCBI annotation: ORF013 # Family: family:all:522 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240822;genbank:gi:66394683;genbank:GeneID:5133901 Probab=94.34 E-value=0.0047 Score=33.35 Aligned_cols=259 Identities=8% Similarity=-0.044 Sum_probs=124.9 Q ss_pred CccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCC-ceeeEEEeeecccCceeEecCCCCccceeeec Q lcl|NC_020082. 43 PNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPE-YADTWMYRSYDGVTMGKFIGANGQDLPRVAQS 121 (354) Q Consensus 43 ~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~-~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~ 121 (354) =+-+.-+|--. .| -+-+-|.|.....+....+..+.+.+.. .-.++.++.+...|.++.+.++ ++++..... T Consensus 1 Ma~T~~~d~I~----Pe--v~~~~V~e~~~~~~~~~~~~~~d~~L~g~~G~ti~~P~~~~igdae~~~eg-~~i~~~~lt 73 (270) T protein:vir:95 1 MTQTKKANLIN----PE--VLANVVSAQMQNAIRFTPYAVTDDTLVGQPGDTITRPKYAYIGAAEDLQEG-VAMDTTQMS 73 (270) T ss_pred CCceehhhhcc----hH--HHHHHHHHHHHhHHhhccccccccccCCCCCCEEEeeeecCCCccccccCC-Cccchhhcc Confidence 01112222111 11 1111112222222333333444333222 3557888888999999988875 468877788 Q ss_pred cceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceecccccc Q lcl|NC_020082. 122 AQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYK 201 (354) Q Consensus 122 ~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~ 201 (354) .+.....+.+.+.+|.+ -|++.....+=| -.+-....+..+++..|+.++ ..+ .|.. .. ++. T Consensus 74 ~~~~~a~i~~~gk~~~i--tD~a~~~~~~dp-~~~~~~q~a~~~a~~~d~~li---~~l--~~a~------~~-~~~--- 135 (270) T protein:vir:95 74 MTTTKVTVKETGKAVEV--TQTAIITNVNGT-LQEASRQLAMSLADKVEIDYI---AEL--NKSK------QT-ATV--- 135 (270) T ss_pred cchheeeeehhhCccee--cHHHHhhhccch-HHHHHHHHHHHHHHHHHHHHH---HHh--cccc------cc-ccc--- Confidence 88888888887666555 566655544444 455566677777777776554 111 1110 00 010 Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeecee Q lcl|NC_020082. 202 TMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQL 281 (354) Q Consensus 202 ~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L 281 (354) ..+ .++|++++..+-. ....++.++|+|..+..|.+...-..... -+-+..|+.+.. +...+.. T Consensus 136 ~~t----~~~~~dA~~~lgd---~~~~~~~i~vhs~~~~~Lrk~~~~~~~~~--~~~~~~~G~ig~-------~~G~~Vi 199 (270) T protein:vir:95 136 SAD----ATGILDAIEVFNS---ENDEDYVLYVNPKDYNKLVKSLFKVGGNV--QDRAISKGDLVE-------IVGVSDI 199 (270) T ss_pred ccC----HHHHHHHHHHhcc---ccCCCcEEEEcHHHHHHHHhhhccccccc--ccchhcccccce-------ecceeEE Confidence 012 4666777766532 24568899999999999854321111110 011122222222 2222221 Q ss_pred eeccccccccccCcceEEEEEEcCcceEEEeeccchhcccccccC---ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 282 DAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPFRMLAPQMAS---LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 282 ~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~~~~~~~~~~---~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .... .-..+ -+|-..+.-+.+....+.+. .. .|+ ....+ +.-+..||.+++|..++.+..+ T Consensus 200 v~s~-----~~~~~----~~~l~~~gAi~~~~~~~~~v-Et-dRd~~~~~d~i-~~~~~y~v~~~~~skvv~~t~~ 263 (270) T protein:vir:95 200 VKSK-----RVSEN----TAFLQRYGAMEIVNKKKPEA-YT-DFDILKRTHLL-STNYHYSVNLKDETGVVKVTFK 263 (270) T ss_pred EeCC-----CCCce----eEEEEeccceeeeecCCcee-ee-ccchhhcccEE-EeeeEEEEEEEccceEEEEEec Confidence 1110 00001 12222234444444444331 11 111 11122 2223468999999999998877 No 138 >protein:vir:99888 Length: 309 # NCBI annotation: capsid protein # Family: family:all:908 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164075;genbank:gi:56692607;genbank:GeneID:3192616 Probab=94.26 E-value=0.0049 Score=33.24 Aligned_cols=268 Identities=12% Similarity=0.057 Sum_probs=115.1 Q ss_pred hcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceee Q lcl|NC_020082. 40 IGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVA 119 (354) Q Consensus 40 ~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~ 119 (354) +.+.....|.. |+.+= +.-.-+++.+.+++|.......+.+-..|...+..-...---....+.-.++ T Consensus 1 ~~~~~~~~dp~---------LT~~A---~gy~n~~~Ia~~l~P~vpV~~~~~~~~~f~~~e~F~~~~t~r~~~~~~~~v~ 68 (309) T protein:vir:99 1 MSNAPFPIDPE---------LTAIA---IAYRNGRMISDEVLPRVPVGKQEFKFWKYDLAQGFTVPETLVGRKSKPNEVE 68 (309) T ss_pred CCCCCcCcCHh---------HHHHH---hhccChhhhhhhcCCccccCccccceeeechhhcccccchhhccCCCcceEe Confidence 22222222311 22211 1112344677788887644333333333322221000000000111112345 Q ss_pred eccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhh----heeeeeehhhCceeeeecC-C-ccc Q lcl|NC_020082. 120 QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQ----SVAYFGDSSRGMYGLFNNP-N-VTL 193 (354) Q Consensus 120 ~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n----~~~f~G~~~~gi~GLlN~p-~-~~~ 193 (354) .........+...+....+..+|+..+. .+.++.....+.+...+...++ ++++.-. |.| + ..+ T Consensus 69 ~~~~~~~~~~~~~~L~~~i~~~~~~~a~-~~~d~~~~Av~~l~~~i~l~rE~~~A~lv~~~a---------~y~~~~k~~ 138 (309) T protein:vir:99 69 FSATDETGSTEDHGLDAPVPQADIDNAP-TNYNPLGHATEQTTNLILLDREARTSKLVFSPN---------SYAAGNKTT 138 (309) T ss_pred ecccCceeeecccceeecCCchhhhhcc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcChh---------hcCCCceEE Confidence 5455555556665666666667777663 3566666655555555544443 2222211 111 1 122 Q ss_pred eeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhc-----cCC-C--CCCchHHHHHHhcCce Q lcl|NC_020082. 194 SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQ-----LMT-G--YTDRTVMQHFMEANSY 265 (354) Q Consensus 194 ~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~-----~~~-~--~~~~Tvl~~l~~n~~~ 265 (354) .+.+..|+++++| ++.||.++..++ | ..|++++|+...|..|.+- ++. . ..+.--.++|++- T Consensus 139 Lsgt~~wsd~~SD-Pi~~i~~~~~~~-----g-~~PN~~vlg~~~~~~l~~hp~i~~~ik~~~~~~g~it~~~la~l--- 208 (309) T protein:vir:99 139 LSGADQWSDPTSN-PLPVITDALDSV-----I-LRPNIGVLGRRTATILRRHPKIVKAYNGSLGDEGMVPMAFLQEL--- 208 (309) T ss_pred ecCccccCCCCCC-cHHHHHHHHHhh-----C-CCcceEEechHHHHHHhhCHHHHHHhcCCCccccccCHHHHHHH--- Confidence 3445569887664 678888887664 3 5999999999999887541 111 1 1111123555542 Q ss_pred eecccccceEEeeceeeeccccc-ccccc-------CcceEEEEEEcC-cceEEEeeccchhcccc-c---ccCceeEEe Q lcl|NC_020082. 266 TLLTGNELDIQIRFQLDAAELAA-NGVSN-------SNKPRYMVYDKS-DRNLAMANPIPFRMLAP-Q---MASLGITVP 332 (354) Q Consensus 266 ~~~~g~~l~I~~~~~L~~~~~~~-~g~g~-------~g~d~~v~y~~d-~~~~~~~vp~~~~~~~~-~---~~~~~~~~~ 332 (354) ++++.+.. +..... +..|. -|.+..++|... .+++. . .++... + ...-.+..| T Consensus 209 -------~~ve~V~v--g~a~~n~a~~g~~~~~~~iwg~~~~L~y~~~~~~~~~----~-ps~G~t~~~~~r~~g~~~d~ 274 (309) T protein:vir:99 209 -------LELDAIYI--GEARLNIARPGQNPNLIRAWGPHASFIYRDRLADTRN----G-TTFGLTAQWGDRVSGSIADP 274 (309) T ss_pred -------hCcceEEe--ecceeeccccccccccccccCCcEEEEEcCCCCCCcc----c-ccccceeecccccCCceeee Confidence 11111111 111100 00011 134555666432 22221 1 122111 1 122245667 Q ss_pred eeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 333 AEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 333 ~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++..-||-.||-- -+++--|. T Consensus 275 ~~~~~g~~~vr~~-~~~k~~i~ 295 (309) T protein:vir:99 275 NIGLRGGQRVRVG-ESVKELVT 295 (309) T ss_pred eeccCCceEEEEe-ccccchhc Confidence 7776666444321 11111111 No 139 >protein:vir:97255 Length: 310 # NCBI annotation: hypothetical protein ORF017 # Family: family:all:1120 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294525;genbank:gi:149408246;genbank:GeneID:5237120 Probab=93.94 E-value=0.0059 Score=32.81 Aligned_cols=283 Identities=11% Similarity=-0.029 Sum_probs=133.1 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc---cCceeEecCCC- Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG---VTMGKFIGANG- 112 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~---~G~a~~~~~~~- 112 (354) |- + .+-|+++ .+.. ..+...|+|.....-...+++|-..--+ + ++.|..... ++...+...+. T Consensus 1 mp-----a-ltLaea~--k~~~--d~l~~~ViE~~~~~s~lL~~LpF~~veg-~--~~~ynR~~~~~~~~~~~v~~~~~~ 67 (310) T protein:vir:97 1 MA-----S-VTLAESA--KLAQ--DELVAGVIENIITVNRMFDVLPFDSIEG-N--SLAYNRENVLGDVIMAGVGTTFSG 67 (310) T ss_pred Cc-----c-cchHHHh--hcCc--chHHHHHHHHHhccchHHHhCCcccccC-C--cceeeEeeccCCcccccccccccC Confidence 11 1 1112221 2222 3456677887665555556665322111 1 233333222 22222211111 Q ss_pred CccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcc--hHHHHHHHHHHHHHhhheeeeeehh-hCceeeeec- Q lcl|NC_020082. 113 QDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPID--AEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNN- 188 (354) Q Consensus 113 ~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld--~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~- 188 (354) .+.|......++....+..++..++++.+-.+. ..+-+.+ ....+...+++.++.++..+|||.. ..++||+.. T Consensus 68 ~g~~~~~~t~~~~~~~L~i~~g~~~Vd~~i~dl--~~~~~~dq~~~Ql~~~iea~~~~~e~~lINGD~a~n~F~GL~~~~ 145 (310) T protein:vir:97 68 AGAGKAAATFTKVNSNLTTIMGDAEVNGLIQAT--RSGDGNDQTAVQIASKAKSAGRKYQDQLINGNGAGNEFAGLIQLC 145 (310) T ss_pred CCccccccccceeeeeeeeeeehhhhhhHHHhh--hcCChHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcccchhhcC Confidence 112222233345555566666555543221111 1233333 3456677788899999999999874 357799754 Q ss_pred CCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHH---HHHHhhccC-CCCCCchHHHHHHhcCc Q lcl|NC_020082. 189 PNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDL---WNQANNQLM-TGYTDRTVMQHFMEANS 264 (354) Q Consensus 189 p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~---~~~L~~~~~-~~~~~~Tvl~~l~~n~~ 264 (354) .+-+....++.=..-| ++|+.+++..+|.. --.|..|+++|.. +.-+.|.-. ...+..++..+- T Consensus 146 ~~~q~i~~~~~gg~~t----~d~LDeLl~~v~~~---~g~p~~~l~~~~~~r~i~A~~R~~~~~g~~~~~~~~~G----- 213 (310) T protein:vir:97 146 ASGQKATTGATGSAIS----FAILDELMDLVVDK---DGQVDYLTMHARTLRSYKALLRALGGASINEVVELPSG----- 213 (310) T ss_pred CccceeecCCCCCCCC----HHHHHHHHHHHhcC---CCCCCEEEecHHHHHHHHHHHHHhcCCCCCCccccCCC----- Confidence 2222222111111123 47888888888742 2368899999975 555544210 011222221111 Q ss_pred eeecccccceEEeeceeeecccccc--ccccCcceEEEEEEcCcc-----eEEEeec----cchhccc-ccccC-ceeEE Q lcl|NC_020082. 265 YTLLTGNELDIQIRFQLDAAELAAN--GVSNSNKPRYMVYDKSDR-----NLAMANP----IPFRMLA-PQMAS-LGITV 331 (354) Q Consensus 265 ~~~~~g~~l~I~~~~~L~~~~~~~~--g~g~~g~d~~v~y~~d~~-----~~~~~vp----~~~~~~~-~~~~~-~~~~~ 331 (354) -+.+....+|.+.+...... ....+|+....+.+...+ +..++.+ ...++.. .+.+. ..|.+ T Consensus 214 -----~~v~~~~GiPi~~~d~ip~~~~~~~~~gtTsIya~r~Ge~~~~~Gv~Gl~~~~~~glsVr~~G~~~~~~v~~~~V 288 (310) T protein:vir:97 214 -----AEVPAYSGTPIFRNDYIPTNQTKGGTTGCTTIFAGTLDDGSRTHGIAGLTATQAAGIQVVDVGESEDSDEHIWRV 288 (310) T ss_pred -----CEEeeeCCeEEEEeCccCCCccccccCCceeEEEEeeCccccccceeccccCCccceeEEeCCcccCCcceeEEE Confidence 11134455555555443221 122345555555554432 3333322 2334443 33333 45666 Q ss_pred eeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 332 PAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 332 ~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..+ -|+-++-|.|++.++-- T Consensus 289 ~~Y---~~~av~~~~A~a~L~~V 308 (310) T protein:vir:97 289 KWY---CGLALFSEKGLACADGI 308 (310) T ss_pred EEe---eeEEEecccceeeeccc Confidence 444 46888889888886655 No 140 >protein:vir:99675 Length: 324 # NCBI annotation: Major capsid protein # Family: family:all:975 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249589;genbank:gi:68299740;genbank:GeneID:3799990 Probab=93.59 E-value=0.007 Score=32.38 Aligned_cols=254 Identities=10% Similarity=0.018 Sum_probs=112.4 Q ss_pred hccccCCCCCceeeEEEeeecccCceeEec-CCCCccce--eeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchH Q lcl|NC_020082. 80 DVPMAANIPEYADTWMYRSYDGVTMGKFIG-ANGQDLPR--VAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAE 156 (354) Q Consensus 80 ~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~-~~~~dip~--v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~ 156 (354) ++ ..+-. ..++.+.. .|..++.. ..++++.. -+..-.+..+.+=. ..-+..-+.+++.++ +..++-.+ T Consensus 1 ~v---r~i~~-g~s~~~~~---iG~~~~~~~~~G~~l~~~~~~~~~~e~~itID~-~l~~~~~VdDiD~~q-a~~Dlr~e 71 (324) T protein:vir:99 1 MT---RTITS-GKSAQFPV---MGRTKARYLKQGQSLDDGREDIKHTEKVITIDG-LLTTDVLIYDIEDAM-NHYDVRSE 71 (324) T ss_pred Ce---eeeec-CceEEEee---eeeeEeccccCCCCcCCCcCCcCcccEEEEecc-hhhhhhhhhhHHHHh-cCccchhH Confidence 11 11111 22333332 34444321 11222211 11222222222211 111233446777775 56778888 Q ss_pred HHHHHHHHHHHHhhheeeeee-------hhhCceeeeecCCccc--eeccccccccCHHHHHHHHHHHHHHHHHHhCCcc Q lcl|NC_020082. 157 QARLAFRGAEEHSQSVAYFGD-------SSRGMYGLFNNPNVTL--SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH 227 (354) Q Consensus 157 k~~aA~~~~~~~~n~~~f~G~-------~~~gi~GLlN~p~~~~--~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~ 227 (354) -.+.+..++++..|+.+|-=. +.....+.....+... .+.+..=...+++.+++.|.++..+|.++.--. T Consensus 72 ~s~~~G~aLA~~~Dq~i~~~~a~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~dai~~a~~~Lde~~VP~- 150 (324) T protein:vir:99 72 YSTQMGEALAMAADVANYAEMAKLVNSRKETTNENIEGLGAASLVKITGKKEDPAKYGTQVIQALTYARAAFAKKYIPA- 150 (324) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccCCccceecccccccccccCHHHHHHHHHHHHHHHhhcCCCC- Confidence 889999999999998876211 1111111111111111 111111123568899999999999988753211 Q ss_pred cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccc----------------- Q lcl|NC_020082. 228 VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG----------------- 290 (354) Q Consensus 228 ~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g----------------- 290 (354) ....++|+|+.|..|...+..... .|.-. +. ..+|.-..+-..+.+++..+.... T Consensus 151 ~gR~~vv~P~~y~~Ll~~~~~~~~-----~~~~~-~~--~~~G~V~~i~Gf~V~~Sn~lp~~~~t~~~~a~~~~~~~~~~ 222 (324) T protein:vir:99 151 GDRTFYTDPDTYSAILAALMPNAA-----NYAAL-ID--PETGNIRNVMGFEVVETPHMTAQMVTNPTDAFDGTGHIFPA 222 (324) T ss_pred CCCEEEeChHHHHHHhhccccccc-----ccccc-cc--eecceEEEEeceEEEecCCcccccccccccccccccccccc Confidence 235799999999988654322111 11111 11 122333344444444443332110 Q ss_pred ----------cccCcceEEEEEEcCcc-eEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 291 ----------VSNSNKPRYMVYDKSDR-NLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 291 ----------~g~~g~d~~v~y~~d~~-~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+..++-+.+++..+-- +++. ++....... +.+-..+.+...... |..+.||++++.+... T Consensus 223 ~~~~~~~~ky~~d~~~~~gl~~~~~a~~tv~~-~~~~~e~~~-~~~~~~d~i~~~~a~-G~~~lRPe~a~~v~l~ 294 (324) T protein:vir:99 223 TGDSTTTGKMTVGADNVVGLFVHRSAVATLKL-KDMALERAR-RPEYQADQIIAKYAM-GHGGLRPEAVGAIIFE 294 (324) T ss_pred ccccccccccccccCceeEEEEehhheEEEee-ecceeccee-chhhHHHhhhhhhhh-cCcccccceEEEEEEc Confidence 00011112222221100 1111 111111111 122234444455544 7888899999888766 No 141 >protein:vir:6324 Length: 335 # NCBI annotation: capsid protein # Family: family:all:2806 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877471;genbank:gi:33300843;uniprot:Q7Y2D3;genbank:GeneID:1482613 Probab=92.35 E-value=0.012 Score=31.16 Aligned_cols=294 Identities=9% Similarity=0.006 Sum_probs=133.2 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.++. .+ -... +. .++ ...|+.. -.-+|.+...+.-..+.++.+.+- -+..++.++.. T Consensus 1 ms~~~~~-tr--~~~~-----~s--~~d-~al~le~----f~geV~~af~~~s~~~~~~~~rti--~~g~s~~~~~i--- 60 (335) T protein:vir:63 1 MSFLNDL-TR--PNYA-----GK--NAD-VDIHLEE----HLGIVDKHFAYTSKFAPLMNIRDL--RGSNVVRLDRL--- 60 (335) T ss_pred CCCcccc-hh--hhcc-----cc--cch-hheehhh----hhhhHHHHHHhhhhhccccceeee--ccceeEEEeee--- Confidence 3322100 00 0000 00 011 1235532 233343333333344444444332 22445554443 Q ss_pred CceeEe----cCCCCccceeeeccceeEEEE--EEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee- Q lcl|NC_020082. 103 TMGKFI----GANGQDLPRVAQSAQMHTVPL--GYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF- 175 (354) Q Consensus 103 G~a~~~----~~~~~dip~v~~~~~~~~~pv--~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~- 175 (354) |..+.. |..-++.|... ++..+.| ..+...+ +.+++.++ ...++-.+-.+..-.+|++..|+.+|. T Consensus 61 G~~~~~~~~pG~~l~~~~~~~---~k~~itVD~ll~a~~~---I~dlDe~~-~~yDvRse~s~e~G~aLA~~~D~~~~~~ 133 (335) T protein:vir:63 61 GNVEAKGRRAGEELERSRVVN---DKWNLTVDTLLYLRHQ---FDHQDEWT-QSFDMRKEVAELDGQELARKFDQACLIQ 133 (335) T ss_pred eeeeeecccCCcCcCCCCccc---cceEEEecceeechhh---hhhHHHHh-cCchhHHHHHHHHHHHHHHHHHHHHHHH Confidence 444332 12223323221 2222211 1122222 45666654 455666777788889999999997761 Q ss_pred -----ee-hhhCceeeeecCCccc-eeccccccccCHHHHHHHHHHHHHHHHHHhCCcc----cccEEEeCHHHHHHHhh Q lcl|NC_020082. 176 -----GD-SSRGMYGLFNNPNVTL-SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH----VPNTALMFPDLWNQANN 244 (354) Q Consensus 176 -----G~-~~~gi~GLlN~p~~~~-~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~----~p~~L~l~p~~~~~L~~ 244 (354) +. +....+|-++ +|+.. ...++.=+...++.+.+-+..+..+|.++ .+. .+..++|+|..|..|.. T Consensus 134 i~~aa~~~a~~~~~~~~~-~G~~~~~~~tg~~~~~~~~~l~~a~~~a~~~L~e~--dVP~~~~~dr~~vv~P~~y~~Ll~ 210 (335) T protein:vir:63 134 VIKAAAMDAPVDLEDAFS-PGVLEKLDLTGLTAKQAADKIVRMHRRVVETFIDR--DLGDAVYSEGLTPMSPRVFSLLLE 210 (335) T ss_pred HHhhccccCccccCCCcC-CCcceeeeeccCcccccHHHHHHHHHHHHHHHHhc--cCCCcccCceEEEeChHHHHHHhc Confidence 11 1223333333 22221 11222112235888888888888888764 332 23689999999999875 Q ss_pred ccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccC-------------cceEEEEEEcCcceEEE Q lcl|NC_020082. 245 QLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNS-------------NKPRYMVYDKSDRNLAM 311 (354) Q Consensus 245 ~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~-------------g~d~~v~y~~d~~~~~~ 311 (354) - ..-.+. +|...+.......|.-..+..++.+++..+-.. .++. .+.++.++- .++-+.. T Consensus 211 ~--~~l~n~---~~~~s~~~~~~~~g~v~~v~Gv~V~~sn~lP~~-~~t~~~lg~a~n~~~~d~~~~~~~~~-~~~Al~t 283 (335) T protein:vir:63 211 H--DKLMNV---EYQATGATNDYVKSRVAILNGVKVLETPRFATK-AIAAHPLGRHFNVSAEESERQIALFL-PSKTLIT 283 (335) T ss_pred c--cccccc---ccccccccccccCceeEEeeceEEEeeccCCCC-CcccccccccCCccccccceeEEEEE-ecceEEE Confidence 2 111111 222222111122344455555555555544211 1110 111222221 2233323 Q ss_pred eeccchhcc-cccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 312 ANPIPFRML-APQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 312 ~vp~~~~~~-~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...++++.- .-+.+...|.+.+... -|+-++||.+++-+... T Consensus 284 ~~~~~vt~e~~~~~~~~~~~i~~~~a-~G~g~lRPe~a~~i~~t 326 (335) T protein:vir:63 284 AQVAPVQAKLWEDNEKFSWVLDTFQM-YNIGARRPDTAGAIELK 326 (335) T ss_pred EEEeecccceeeccchhhHHhHHHHH-cCCcccccceEEEEEEc Confidence 222333321 1123345566666665 47999999999999988 No 142 >protein:vir:10450 Length: 344 # NCBI annotation: major capsid protein # Family: family:all:975 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848297;genbank:gi:30387487;genbank:GeneID:1733971 Probab=92.19 E-value=0.012 Score=31.03 Aligned_cols=297 Identities=10% Similarity=0.023 Sum_probs=125.8 Q ss_pred hhhhhhcCCccccc-------hhhh-hHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCcee Q lcl|NC_020082. 35 TALDAIGNPNVMLD-------ADGG-IAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGK 106 (354) Q Consensus 35 ~amda~~~~~~~~d-------A~~~-~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~ 106 (354) ||-- .+.+.+.+. +.+. ..|+....-+|+...- +.-..+.++.+.+ +- +..++.+... |..+ T Consensus 1 ma~~-~~~~~~n~~~~~~~~~~~~~~al~ie~~~geV~~~f~----~~s~~~~~~~~r~-i~-~g~s~~~~~i---G~~~ 70 (344) T protein:vir:10 1 MANM-TGGQQLGTNQGKDVMAAGDKLALFLKVFGGEVLTAFA----RTSVTTSRHMVRS-IS-SGKSAQFPVL---GRTQ 70 (344) T ss_pred Cccc-cccccCCcccCCccCCccchhHHHHHHHHHHHHHHHH----HHhhhcccceeee-ec-ccceEEEEee---ceeE Confidence 2200 000111111 1112 2355333334444443 2333344444432 12 2445544433 4443 Q ss_pred Ee-cCCCCcccee--eeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee----ee-- Q lcl|NC_020082. 107 FI-GANGQDLPRV--AQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF----GD-- 177 (354) Q Consensus 107 ~~-~~~~~dip~v--~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~----G~-- 177 (354) .- -..+.+++.. +....+..+-+=. ..-+..-+.+++.++ ...++-.+-.+.+..++++..|+.++- +. T Consensus 71 ~~~~~~G~~l~~t~~~~~~~e~~l~ID~-~~y~~~~VdDiD~~q-~~~D~r~~~~~~~G~aLA~~~D~~i~~~la~~a~~ 148 (344) T protein:vir:10 71 AAYLAPGENLDDIRKDIKHTEKVITIDG-LLTADVLIYDIEDAM-NHYDVRSEYTSQLGESLAMAADGAVLAEIAGLCNV 148 (344) T ss_pred EEeeecCCCCCCCCCCcccceEEEEEcc-hhhhhhhhhhHHHHh-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc Confidence 21 1122333221 1222222222211 012334457888875 567788888889999999999987752 11 Q ss_pred ---hhhCceeeeecCCccceeccccc--cccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhccCCCCC Q lcl|NC_020082. 178 ---SSRGMYGLFNNPNVTLSSATKDY--KTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQLMTGYT 251 (354) Q Consensus 178 ---~~~gi~GLlN~p~~~~~~~~~~w--~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~~~~~~ 251 (354) ......|+-....+.....+..- ...+++.+++.|.++...|.++ .+. ....++|+|..|..|..-...... T Consensus 149 ~~~~~~~~~g~~~~~~~~~~~~~~~~t~~~~~~~~~~~~i~~a~~~Lde~--~VP~~gR~~vv~P~~y~~Ll~~~~~~~~ 226 (344) T protein:vir:10 149 ESQYNENITGLGTATVIETTQDKTTLTDQVALGKEIIAALTKARAALTKN--YVPSSDRVFYCDPDSYSAILAALMPNAA 226 (344) T ss_pred ccccccccccccccceeecccccccccchhhhHHHHHHHHHHHHHHHhhc--CCCccCCEEEeChHHHHHHhhccccccc Confidence 11222222111111111111111 2245678888899998888764 332 125788999999998653211000 Q ss_pred CchHHHHHHhcCceeecccccceEEeeceeeeccccccc-----cccCcce----------EEEEEEcC------cceEE Q lcl|NC_020082. 252 DRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANG-----VSNSNKP----------RYMVYDKS------DRNLA 310 (354) Q Consensus 252 ~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g-----~g~~g~d----------~~v~y~~d------~~~~~ 310 (354) +|.- .+. ..+|.-..+-..+.+++..+.... .+..|.. +.+.+++. |+-+. T Consensus 227 -----~~~~-~~~--~~~G~V~~v~G~~V~~Sn~lp~~~~~~~~~~~tg~~~~~~~~~~~~~~~~~s~~~~l~~h~~A~~ 298 (344) T protein:vir:10 227 -----NYAA-LID--PEKGSIRNVMGFEVVEVPHLTAGGAGTSREGTTGQKHAFPATKSGNDKVAKDNVIGLFMHRSAVG 298 (344) T ss_pred -----cccc-ccc--eeeeEEEEEeceEEEeccccccccCCcccccccCccccccCCcccceeeecceeEEEeechhhhh Confidence 1111 111 112333333333444443322100 0001111 11111110 01000 Q ss_pred Eeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 311 MANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 311 ~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...-++++.-.. ..+...+.+.+... -|+.+.||++++.+.++ T Consensus 299 ~v~~~~~~~e~~r~~~~~~d~i~g~~~-~G~~vlRPe~a~~v~~~ 342 (344) T protein:vir:10 299 TVKLRDLALERARRANFQADQIIAKYA-MGHGGLRPEAAGAVVFK 342 (344) T ss_pred hhhhccceeecccchhHHHHHHHHHhh-cccceecccceEEEEee Confidence 000111111000 12233455555554 47999999999999999 No 143 >protein:vir:79078 Length: 307 # NCBI annotation: gp8 # Family: family:all:908 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111208;genbank:gi:134288798;genbank:GeneID:4960752 Probab=91.52 E-value=0.015 Score=30.51 Aligned_cols=275 Identities=10% Similarity=0.026 Sum_probs=100.0 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCc----eeE-ecCC Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTM----GKF-IGAN 111 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~----a~~-~~~~ 111 (354) |-.. +.....|. .|+.+= +.-..+++.+.+++|...-...+ +.|..++...- .+. .+.. T Consensus 1 m~~~-~~~~~~dp---------~LT~~A---~gy~n~~~Iad~lfP~vpV~~~~---~k~~~f~~e~f~~~~t~ra~~~~ 64 (307) T protein:vir:79 1 MGRL-SKLRIVDP---------VLTNLA---IGYTNAEFIGQTLMPVVEVEKEG---GKIPKFGKESFRLYQTERALRAK 64 (307) T ss_pred CCCC-CCCcccCH---------HHHHHH---hhccchhhhhhhcCCcccccccc---cceeeeccccccccccccccCCC Confidence 1111 11111121 122211 12224567888888876443333 33333321110 000 0011 Q ss_pred CCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHH----HHHHHHhhheeeeeehhhCceeeee Q lcl|NC_020082. 112 GQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAF----RGAEEHSQSVAYFGDSSRGMYGLFN 187 (354) Q Consensus 112 ~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~----~~~~~~~n~~~f~G~~~~gi~GLlN 187 (354) .+.+.. .+.+.....+.......-... +.....+.++.....+... +..+...-+++|.+.. +. T Consensus 65 ~~~v~~--~~~~~~~~~~~~~~l~~~id~---r~~~~~~~~~~~~Av~~l~d~I~l~~E~~~A~l~~~~~~-------y~ 132 (307) T protein:vir:79 65 SNRMNP--EDIDSVDVNLDEHDLEYPIDY---REDQESAFPLEQAAVQTATDAIQLRREKMIADLSQNPSS-------YA 132 (307) T ss_pred cceeee--eccccccccccccchhhcccc---hhcCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHhccccc-------cC Confidence 111110 011111112222111111111 1122233333333333332 2223333344443321 11 Q ss_pred cCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhc-----cCC-CCCCchHHHHHHh Q lcl|NC_020082. 188 NPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQ-----LMT-GYTDRTVMQHFME 261 (354) Q Consensus 188 ~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~-----~~~-~~~~~Tvl~~l~~ 261 (354) ..+.-+.+.+..|+++++ +++.||.+.+.++... +...|++++|++..|..|.+- ++. ...+.--.++|++ T Consensus 133 ~~~k~tLsgt~~Wsd~~s-DPi~di~~~~~ai~~~--~g~~Pn~~vlg~~a~~~l~~h~~i~~~lk~~~~g~it~~~la~ 209 (307) T protein:vir:79 133 AGNKKQLSATEKFTAANS-DPVGVIEDGKEAIRTK--IGRRPNTMVIGASAYKTLKAHPQLIEKIKYSMKGIVTVDLLKE 209 (307) T ss_pred CCceEEEccCcccCCCCC-CcHHHHHHHHHHHHHh--hCCccceEEeCHHHHHHHhcCHHHHHHhcCccccccCHHHHHH Confidence 112223444566988776 4689999999999875 457899999999999988542 110 0111111233333 Q ss_pred cCceeecccccceEEeeceeeecccccc--ccccCcceEEEEEEcC-cceEEEeeccchhcccc-cccCceeEEeeeeee Q lcl|NC_020082. 262 ANSYTLLTGNELDIQIRFQLDAAELAAN--GVSNSNKPRYMVYDKS-DRNLAMANPIPFRMLAP-QMASLGITVPAEYKI 337 (354) Q Consensus 262 n~~~~~~~g~~l~I~~~~~L~~~~~~~~--g~g~~g~d~~v~y~~d-~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~ 337 (354) - +.++.+...++-.-... ..-.-|.+..++|... +.+-.-.+-+| .+... +.++.-...++.+ - T Consensus 210 l----------~~v~~V~vg~a~y~~~~~~~~~iw~~~~~l~y~~~~~~~~~~~~~~p-s~Gyt~~~~g~~~~d~~~~-~ 277 (307) T protein:vir:79 210 I----------FEVENIAVGEAIYADDKDRFTDIWGANIVLAYVPLQRGGQQRTPYEP-SYGYTLRKKGNPVVDTRIE-D 277 (307) T ss_pred H----------hCceeEEEeeeeeecccccchhcCCCceEEEecccccCCCCCccccc-ccceeEEecCceEEecccC-C Confidence 1 11221211111100000 0001244555666421 11111001111 11111 2223323333333 3 Q ss_pred eeEEEECcce-----eeeeecC Q lcl|NC_020082. 338 SGTEFRYPLC-----AAYVDMA 354 (354) Q Consensus 338 gGv~i~~P~a-----i~y~D~~ 354 (354) +|++++|-.- ++.-|.. T Consensus 278 ~~~~~vrv~~~~~~~i~~~~~G 299 (307) T protein:vir:79 278 GKLELVRATDIFRPYLLGADAG 299 (307) T ss_pred CceeEEeecccccceeeccccc Confidence 4555543322 3333322 No 144 >protein:vir:107882 Length: 307 # NCBI annotation: gp34 # Family: family:all:908 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024707;genbank:gi:48696944;genbank:GeneID:2845970 Probab=91.15 E-value=0.017 Score=30.25 Aligned_cols=274 Identities=9% Similarity=0.009 Sum_probs=105.6 Q ss_pred hhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEe----c Q lcl|NC_020082. 34 NTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFI----G 109 (354) Q Consensus 34 ~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~----~ 109 (354) .+.|.. ....|. .|+.+= +.-..+.+.+.+++|.......+.....|. .-.- ... + T Consensus 1 m~~~~~----~~~~dp---------~LT~~A---~gy~n~~~ia~~l~P~vpv~~~~~k~~~f~---~eaF-~~~~t~r~ 60 (307) T protein:vir:10 1 MGRLSK----LRIVDP---------VLTNLA---IGYTNAEFIGQSLMPVVEVEKEGGKIPKFG---KESF-RLYKTERA 60 (307) T ss_pred CCCCCC----CcccCh---------hHHHHH---HhhcchhhhhhhcCCcccccccccceeeEC---cccc-cchhhhcc Confidence 111111 111221 112211 111224577888888765444433333332 1110 000 0 Q ss_pred CCCCccceeeecc-ceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHh----hheeeeeehhhCcee Q lcl|NC_020082. 110 ANGQDLPRVAQSA-QMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHS----QSVAYFGDSSRGMYG 184 (354) Q Consensus 110 ~~~~dip~v~~~~-~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~----n~~~f~G~~~~gi~G 184 (354) -.+ +.-.++... +.....+...+..+-...+ ..+....++.....+.+...+...+ -+++|.... T Consensus 61 ~~~-~~~~v~~~~~~~~~~~~~~~~L~~~id~r---~~~~~~~~~~~~av~~l~d~I~l~~E~~~A~l~~~~~~------ 130 (307) T protein:vir:10 61 LRA-RSNRMNPEDLGSIDIVLDEHDLEYPIDYR---EDQESAFPLEQAAVQTATEAIQLRREKMVADLAQNPNS------ 130 (307) T ss_pred cCC-CcceeecccccccccccccccccccCChh---hcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc------ Confidence 000 000111110 1111112221111112222 2333455555555555544443333 344443211 Q ss_pred eeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCc Q lcl|NC_020082. 185 LFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANS 264 (354) Q Consensus 185 LlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~ 264 (354) +...+..+.+.+..|+++++| ++.||.+.+.++... ....|++++|+.+.|..|.+- ..+++.|+-... T Consensus 131 -y~~~~k~tLsGt~~Wsd~~sD-Pi~di~~~~~ai~~~--~g~~Pn~~vlg~~a~~al~~h-------p~i~e~lk~~~~ 199 (307) T protein:vir:10 131 -YAGGNKKQLSATEKFTAAGSD-PVGVIEDGKEAIRTK--IGRRPNTMVIGASAYKTLKAH-------PQLIEKIKYSMK 199 (307) T ss_pred -cCCCceEEeccccccCCCCCC-cHHHHHHHHHHHHhh--hCCccceEEeCHHHHHHHhcC-------HHHHHHhCCccc Confidence 001122234455679987764 689999999998865 457899999999999988642 123333322110 Q ss_pred eeeccccc-----ceEEeeceeeecc--ccccccccCcceEEEEEEcC-c--ceEEEeeccchhcccc-cccCceeEEee Q lcl|NC_020082. 265 YTLLTGNE-----LDIQIRFQLDAAE--LAANGVSNSNKPRYMVYDKS-D--RNLAMANPIPFRMLAP-QMASLGITVPA 333 (354) Q Consensus 265 ~~~~~g~~-----l~I~~~~~L~~~~--~~~~g~g~~g~d~~v~y~~d-~--~~~~~~vp~~~~~~~~-~~~~~~~~~~~ 333 (354) ....+. +.++.+....+-. ....-.-.-|.+..++|... + +.-.+. +| ++... +.++..+..++ T Consensus 200 --g~it~~~la~ll~v~~i~vg~a~~~~~~~~~~~iw~~~~vl~yv~~~~~~~~~~~~--ep-sfGyT~~~~g~~~~d~~ 274 (307) T protein:vir:10 200 --GIVTVDLLKEIFEVENIAVGEAIYADDKDRFTDIWGANIVLAYVPLQRGGQQRTPY--EP-SYGYTLRKKGNPVVDTR 274 (307) T ss_pred --cccCHHHHHHHhCceeEEEeeeeeeccCCccceeCCCceEEEecccccCCCCCccc--cc-ccceeEEEcCCeEeece Confidence 000000 0111111110000 00000000134455555321 0 110111 11 12111 33455555555 Q ss_pred eeeeeeEEEECcce-----eeeeecC Q lcl|NC_020082. 334 EYKISGTEFRYPLC-----AAYVDMA 354 (354) Q Consensus 334 ~~~~gGv~i~~P~a-----i~y~D~~ 354 (354) .+ .+|+++.|-.- ++.-|.. T Consensus 275 ~~-~~~~~~~r~~~~~~~~i~~~~~G 299 (307) T protein:vir:10 275 IE-DGKLELVRSTDIFRPYLLGADAG 299 (307) T ss_pred ec-CCceeEEeccccccceeeccccc Confidence 55 46666554433 3333322 No 145 >protein:vir:94711 Length: 347 # NCBI annotation: capsid # Family: family:all:975 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338120;genbank:gi:77118198;genbank:GeneID:3707734 Probab=90.83 E-value=0.019 Score=30.04 Aligned_cols=301 Identities=10% Similarity=0.041 Sum_probs=125.7 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |...+.+... .+- +.++.. +|.-..|+... .++|.......-..+.++.+.+ +- +..++.+... T Consensus 1 m~~~~~~~~~----t~~-g~~~~~--~d~~al~ik~f----~~eV~~~f~~~s~~~~~~~~r~-i~-~G~sv~i~~i--- 64 (347) T protein:vir:94 1 MANVPGQKIG----TDQ-GKGKSS--SDALALFLKVF----AGEVLTAFTRRSVTADKHIVRT-IQ-NGKSAQFPVM--- 64 (347) T ss_pred CCCCCccccc----ccc-ccCCcc--ccHHHHHHHHH----hHHHHHHHHHHHhhhccccccc-cc-ccceEEEecc--- Confidence 2222111110 000 011111 11112354332 2333332222223333443332 11 2345544443 Q ss_pred CceeE--ecCCCCccce--eeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee--- Q lcl|NC_020082. 103 TMGKF--IGANGQDLPR--VAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF--- 175 (354) Q Consensus 103 G~a~~--~~~~~~dip~--v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~--- 175 (354) |..++ +.. +++++. .+..-.+..+.+-.+- -+..-+.+++.++ ...++..+-.+.+..++++..|+.++. T Consensus 65 G~~tv~~~t~-G~~l~~~~~~~~~~e~~itID~~~-~~~~~VddiD~~q-~~~D~~~~~~~~~g~aLa~~~D~~i~~~~~ 141 (347) T protein:vir:94 65 GRTSGVYLAP-GERLSDKRKGIKHTEKVITIDGLL-TADVMIFDIEDAM-NHYDVAGEYSNQLGEALAIAADGAVLAEMA 141 (347) T ss_pred cceeeeeecC-CCCcCCCCCCCCcceEEEEecchh-hhhHHhhhHHHHh-cCcchHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 44432 221 122211 1122223233322211 1223345777764 566788888899999999999987752 Q ss_pred ------eehhhCceeeeecCCc-cceecccc-ccccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhcc Q lcl|NC_020082. 176 ------GDSSRGMYGLFNNPNV-TLSSATKD-YKTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQL 246 (354) Q Consensus 176 ------G~~~~gi~GLlN~p~~-~~~~~~~~-w~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~ 246 (354) +.+.....|+-. +++ +..+.+.. =..++++.+++.|.++...|.+. .+. ....++|+|..|..|...+ T Consensus 142 ~~aa~~~~~~~~~~g~~~-~s~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~Lde~--~VP~~~R~~vv~P~~~~~Ll~~~ 218 (347) T protein:vir:94 142 ILCNLPAASNENIAGLGT-ASVLEVGKKADLDTPAKLGEAIIGQLTIARAKLTSN--YVPAGDRYFYTTPDNYSAILAAL 218 (347) T ss_pred HHhccccccccccCCCcc-cceeeccccccccchhhhHHHHHHHHHHHHHHHhhc--CCCCCCcEEEeCHHHHHHHhccc Confidence 112222333321 211 11111111 11245678888888888887754 332 2458999999999886532 Q ss_pred CCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccc----------cCcceEEEE------EEcCc-ceE Q lcl|NC_020082. 247 MTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS----------NSNKPRYMV------YDKSD-RNL 309 (354) Q Consensus 247 ~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g----------~~g~d~~v~------y~~d~-~~~ 309 (354) . .+..+|..... ..+|.-..+-..+++++..+...+.+ ..|.+..+. |.-+- ..+ T Consensus 219 ~-----~~~~~~~~~~~---~~~G~Vg~i~G~~V~~Sn~lp~~~~t~~~~~~~~~~~aG~~~~~~~~~~~~~~~~~~~~~ 290 (347) T protein:vir:94 219 M-----PNAANYAALID---PETGNIRNVMGFVVVEVPHLVQGGAGETRGDDGITIASGQKHAFPATASSDVKVTMDNVV 290 (347) T ss_pred h-----hhhhhcccccc---ccccceEEEeceEEEecCcccccccccccccCcceecCcccccccccchhhhccccccee Confidence 1 11112222111 11233334444444444433221111 112111111 11110 011 Q ss_pred EEee---------ccchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 310 AMAN---------PIPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 310 ~~~v---------p~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.. .++++.-. -..+...+.+.+... .|+.+.||.+++-+..+ T Consensus 291 ~l~~h~~A~~~v~~~~~~~e~~r~~~~~~d~i~~~~~-~G~~~~rP~~a~~~~~~ 344 (347) T protein:vir:94 291 GLFSHRSAVGTVKLRDLALERDRDVDAQGDLIVGKYA-MGHGGLRPEAAGALVFS 344 (347) T ss_pred EEEeehhhhhhhhcccccccchhchhhHHHHhhhhhh-hcCcccccceeEEEEec Confidence 1110 11111111 012223455555554 47999999999777666 No 146 >protein:vir:94622 Length: 341 # NCBI annotation: PfWMP4_37 # Family: family:all:2203 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762667;genbank:gi:115304375;genbank:GeneID:5142322 Probab=90.21 E-value=0.022 Score=29.67 Aligned_cols=294 Identities=10% Similarity=-0.042 Sum_probs=124.3 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCc Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQD 114 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~d 114 (354) |+|-=...++....+. .-.|.- +-....+.+...+.+..+.++.-...-.-..+++.++... ...++.+.. +.. T Consensus 1 ~~~~~~~~~~~~~t~~-v~~fip---ei~s~~i~~~l~~~~v~~~~~~d~~~~~~~Gdtv~ip~~g-~~~~~d~~~-~~~ 74 (341) T protein:vir:94 1 MALGNTITGPSINTQR-GQQFIP---EQWLSEVQMFRKAKMLDTSVVKTWGAQVKKGDTFHVPRIS-ELGVEDKAT-DVP 74 (341) T ss_pred Ccchhhhccccccchh-HHHHHH---HHHHHHHHHHHHhhcchhhccccccccccCCceEEEeccC-cceeeeecC-CCc Confidence 2221111111111111 112332 2234556666666677776654221111113566666543 344554432 234 Q ss_pred cceeeeccceeEEEE-EEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccc Q lcl|NC_020082. 115 LPRVAQSAQMHTVPL-GYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTL 193 (354) Q Consensus 115 ip~v~~~~~~~~~pv-~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~ 193 (354) ++.-+.+-......+ .....++.++ +++..+ ...++-.+-.+.+.+++++..|+.++--.+....... ++ +. T Consensus 75 i~~~~~~~~~~~itiD~~~~~~~~i~--d~d~~~-~~~d~~~~~~~~~~~aLA~~~D~~i~~~~a~~~~~~~---~~-~~ 147 (341) T protein:vir:94 75 VGVQPVNDTDFVITVDTDRTTAVALD--DLLEIQ-ASYDLRAPYLEAMGYALAKDMTGSILGLRAAVQNTAS---QN-VF 147 (341) T ss_pred cccccccCceEEEEEeeeeecceeec--hHHHHh-hccchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc---Cc-cc Confidence 554444444555555 2224445554 555543 3557778888888999999988887633222111111 00 00 Q ss_pred eecccccc-ccCHH-HHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeeccc Q lcl|NC_020082. 194 SSATKDYK-TMNGQ-ELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTG 270 (354) Q Consensus 194 ~~~~~~w~-~~T~~-ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g 270 (354) ...+.. +.++. -.++.|.++...|.+. ++. ....|+|+|..|..|.+-. ..+-.++.-++ . ..+| T Consensus 148 --~~~~~~~t~~~~~~~~~~i~~a~~~Lde~--~VP~~gR~lvv~P~~~~~Ll~~~-----~~~~~~~~g~~-~--l~~G 215 (341) T protein:vir:94 148 --SSSNGAITGNGQAFSFAVFLAARRLLLEA--DVPEEKIVLLISPGQESALFTIP-----QFISKDFINNA-P--IAQG 215 (341) T ss_pred --cCccccccCchhhhhHHHHHHHHHHHhhc--CCCccCCEEEeCHHHHHHHhhch-----hhhhhhccccc-h--hhee Confidence 011111 11122 2356666666666543 332 2357999999999996421 11111221111 0 1123 Q ss_pred ccceEEeeceeeeccccccccc-----------------------------cCcceEEEEEEcC-cceEEEeeccchhcc Q lcl|NC_020082. 271 NELDIQIRFQLDAAELAANGVS-----------------------------NSNKPRYMVYDKS-DRNLAMANPIPFRML 320 (354) Q Consensus 271 ~~l~I~~~~~L~~~~~~~~g~g-----------------------------~~g~d~~v~y~~d-~~~~~~~vp~~~~~~ 320 (354) ....+....++++..+...... ..+.-+.+++.++ --.+++.-|+-++.. T Consensus 216 ~ig~i~G~~V~~Sn~lp~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~gl~~~~~av~~~k~~~~~~~~~~ 295 (341) T protein:vir:94 216 QIGSLMGVRVIRTSLIGNNSATGWRNGAPTIAPAEATPGFTGSRYLPKQDSFTSLPATFTGNSRPVHTAVMCHMDWAAAV 295 (341) T ss_pred eeeeEeceEEEEeccccccccccccccccceecccccccccccccccccccccccEEEEEEecccccceeeecchhhhcc Confidence 2233344444433322111100 0011111222111 112222222223322 Q ss_pred ccccc---------CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 321 APQMA---------SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 321 ~~~~~---------~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+|.. ...+.+.... .-|+-+.||.+++.+=-+ T Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~~~-~~G~~~lrp~~~v~~~~~ 337 (341) T protein:vir:94 296 VSKAPRVTQSFENREQVWLMVGRQ-AYGARLYRPLHAVNIHTT 337 (341) T ss_pred ccccccccccchhhhhhhhhhhhh-hhcccccCcceeEEEecC Confidence 22211 1122233334 336888888887766555 No 147 >protein:vir:2201 Length: 345 # NCBI annotation: major capsid protein # Family: family:all:975 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_041998;swissprot:sw:p19726;genbank:gi:9627469;goa:P19726;uniprot:P19726;genbank:GeneID:1261026 Probab=90.19 E-value=0.022 Score=29.65 Aligned_cols=295 Identities=9% Similarity=0.037 Sum_probs=125.5 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccc-----hhhhh-HHHHHHHHHHHHHHHHhhhcc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLD-----ADGGI-AFYISQLAGIEATVYETPYGD 74 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~d-----A~~~~-~fl~~~L~~id~~v~e~~~~~ 74 (354) || .|-...+++..+. +++.. .|+....-+++...-+ . T Consensus 1 ~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~al~le~f~geV~~~f~~----~ 43 (345) T protein:vir:22 1 MA---------------------------------SMTGGQQMGTNQGKGVVAAGDKLALFLKVFGGEVLTAFAR----T 43 (345) T ss_pred Cc---------------------------------ccccchhcccccccccccCCchhHHHHHHHhHHHHHHHHH----H Confidence 00 0111011111111 12222 3553333344444432 2 Q ss_pred ccchhhccccCCCCCceeeEEEeeecccCceeE--ecCCCCcccee--eeccceeEEEEEEEEeeeeecHHHHHHHHHhC Q lcl|NC_020082. 75 ITYRSDVPMAANIPEYADTWMYRSYDGVTMGKF--IGANGQDLPRV--AQSAQMHTVPLGYAGNECHYTLDEMRKSAAMN 150 (354) Q Consensus 75 l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~--~~~~~~dip~v--~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g 150 (354) =..+.++.+.+ +- +..++.+... |..+. +..+ ..+... +....+..+.+=. ..-+..-+.+++.++ +. T Consensus 44 s~~~~~~~~r~-i~-~gks~~~~~i---G~~~~~~~~~G-~~l~~~~~~~~~~e~~ltID~-~~y~~~~VddiD~~q-~~ 115 (345) T protein:vir:22 44 SVTTSRHMVRS-IS-SGKSAQFPVL---GRTQAAYLAPG-ENLDDKRKDIKHTEKVITIDG-LLTADVLIYDIEDAM-NH 115 (345) T ss_pred hhhcccceeee-cc-ccceEEEeee---cceEEEeeecC-CCCCCCCCCcccceEEEEecc-hhhhhhhHhhHHHHh-cC Confidence 22334444321 22 2445555543 44432 2222 222111 1222222222111 111233446777775 56 Q ss_pred CCcchHHHHHHHHHHHHHhhheeee----e-e---h-hhCceeeeecCCccceecccccc--ccCHHHHHHHHHHHHHHH Q lcl|NC_020082. 151 MPIDAEQARLAFRGAEEHSQSVAYF----G-D---S-SRGMYGLFNNPNVTLSSATKDYK--TMNGQELFNMLNAPIFSV 219 (354) Q Consensus 151 ~~ld~~k~~aA~~~~~~~~n~~~f~----G-~---~-~~gi~GLlN~p~~~~~~~~~~w~--~~T~~ei~~di~~~~~~l 219 (354) .++-.+-.+.+..++++..|+.++- + . + ..+..|+-+-..+.....+.++. ..+++.+++.|.++..+| T Consensus 116 ~D~r~~~s~~~G~aLA~~~D~~i~~~l~k~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~~~ai~~a~~~L 195 (345) T protein:vir:22 116 YDVRSEYTSQLGESLAMAADGAVLAEIAGLCNVESKYNENIEGLGTATVIETTQNKAALTDQVALGKEIIAALTKARAAL 195 (345) T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccCHHHHHHHHHHHHHHh Confidence 6777788889999999999998772 1 0 0 01112222222112222233332 245788999999998888 Q ss_pred HHHhCCcc-cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccc------ Q lcl|NC_020082. 220 INLSRRFH-VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS------ 292 (354) Q Consensus 220 ~~~s~g~~-~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g------ 292 (354) .++ .+. .-..++|+|..|..|..-...... +|.-.+.. .+|....+-..+.+++..+.....+ T Consensus 196 de~--~VP~~~R~~vv~P~~y~~Ll~~~~~~~~-----~~~~~~~~---~~G~V~~i~G~~V~~sn~lp~~~~~~~~~~~ 265 (345) T protein:vir:22 196 TKN--YVPAADRVFYCDPDSYSAILAALMPNAA-----NYAALIDP---EKGSIRNVMGFEVVEVPHLTAGGAGTAREGT 265 (345) T ss_pred hhc--CCCccCCEEEeChHHHHHHhcccccccc-----cccccccc---ccceEEEEeceEEEecccccccccCccccCc Confidence 764 222 125799999999998653211110 11111110 1233333333333333222110000 Q ss_pred -------cC-----------cceEEEEEEcCcceEEEeeccch--hcccccccCceeEEeeeeeeeeEEEECcceeeeee Q lcl|NC_020082. 293 -------NS-----------NKPRYMVYDKSDRNLAMANPIPF--RMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVD 352 (354) Q Consensus 293 -------~~-----------g~d~~v~y~~d~~~~~~~vp~~~--~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D 352 (354) .+ .+-++++|.++ -+...-.+++ +... ..+...+.+.+.... |+.+.||.+++.+. T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~h~~--A~~~v~~~~~~~e~~r-~~~~~~d~I~~~~a~-G~~vlRPeaa~~i~ 341 (345) T protein:vir:22 266 TGQKHVFPANKGEGNVKVAKDNVIGLFMHRS--AVGTVKLRDLALERAR-RANFQADQIIAKYAM-GHGGLRPEAAGAVV 341 (345) T ss_pred ccccccccccccceeeeeccCceEEEEEehh--heeeeeeecceeeeee-chhHHHHHHHHHHhc-CCcccccceeEEEE Confidence 00 11133333322 1111111111 1111 223334555555544 69999999998876 Q ss_pred cC Q lcl|NC_020082. 353 MA 354 (354) Q Consensus 353 ~~ 354 (354) .- T Consensus 342 ~~ 343 (345) T protein:vir:22 342 FK 343 (345) T ss_pred Ee Confidence 66 No 148 >protein:vir:78935 Length: 335 # NCBI annotation: capsid protein # Family: family:all:2806 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522824;genbank:gi:158345059;genbank:GeneID:5687425 Probab=89.53 E-value=0.026 Score=29.29 Aligned_cols=294 Identities=9% Similarity=-0.002 Sum_probs=130.7 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.++.- + -...+ ..++ ...|+... .-+|.+...+.-..+.++.+.+- -+..++.++. + T Consensus 1 ms~~~~~t-~--~~~~~-------s~~d-~al~le~f----~geV~~af~~~s~~~~~~~~rti--~~g~s~~~~~---i 60 (335) T protein:vir:78 1 MSFLNDLT-R--PNYAG-------KNAD-VDIHLEEH----LGIVDKHFAYTSKFAPLMNIRDL--RGSNVVRLDR---L 60 (335) T ss_pred CCcccccc-c--ccccc-------ccch-hhhhhhhh----hhHHHHHHHHhhhhccccceeee--ccceeEEEee---e Confidence 32221000 0 00000 0011 12455333 33343333334444444444332 2244555543 3 Q ss_pred CceeEe----cCCCCccceeeeccceeEEEE--EEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee- Q lcl|NC_020082. 103 TMGKFI----GANGQDLPRVAQSAQMHTVPL--GYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF- 175 (354) Q Consensus 103 G~a~~~----~~~~~dip~v~~~~~~~~~pv--~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~- 175 (354) |..+.. |..-+..|... ++..+-| ..+.. .-+.+++.++ ...++-.+-.+....++++..|+.++. T Consensus 61 G~~~~~~~~pG~~l~~~~~~~---~k~~itID~ll~a~---~~VddlDe~~-~~yDvR~e~s~~~G~aLA~~~Dq~~~~~ 133 (335) T protein:vir:78 61 GNVEAKGRRAGEELERSRVVN---DKWNLTVDTLLYLR---HQFDHQDEWT-QSFDMRKEVAELDGQELARKFDQACLIQ 133 (335) T ss_pred eeeeecccccCcccCCCCccc---CCeEEEecceeech---hhHhhHHHhh-cCchhHHHHHHHHHHHHHHHHHHHHHHH Confidence 444432 22223233222 2222211 11122 2245666664 566777777888899999999997761 Q ss_pred -----ee-hhhCceeeeecCCccc-eeccccccccCHHHHHHHHHHHHHHHHHHhCCccc--c--cEEEeCHHHHHHHhh Q lcl|NC_020082. 176 -----GD-SSRGMYGLFNNPNVTL-SSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHV--P--NTALMFPDLWNQANN 244 (354) Q Consensus 176 -----G~-~~~gi~GLlN~p~~~~-~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~--p--~~L~l~p~~~~~L~~ 244 (354) +. +....++-++ ||... ...+..=++.+++.+.+-+.++..++.++ .+.. + ..++|+|..|..|.. T Consensus 134 l~~aa~~~a~~~~~~~~~-~G~~~~~~~tg~~~~~~~~~l~~a~~~a~~~l~ek--dvP~~~~~~rv~vv~P~~y~~Ll~ 210 (335) T protein:vir:78 134 VIKAAAMDAPVDLEDAFS-PGVLEKLDLTGLTAKEAAEKIVRMHRRVVETFIER--DLGDAVYSEGLTPMSPRVFSLLLE 210 (335) T ss_pred HHhhcccccccccCCCcC-CCcceeeeeccccccccHHHHHHHHHHHHHHHHhc--cCCCCCCCccEEEeChHHHHHHhc Confidence 11 1111222222 22211 11111112235888888888888888754 2221 2 478999999999864 Q ss_pred ccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccC---c----------ceEEEEEEcCcceEEE Q lcl|NC_020082. 245 QLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNS---N----------KPRYMVYDKSDRNLAM 311 (354) Q Consensus 245 ~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~---g----------~d~~v~y~~d~~~~~~ 311 (354) -. .-.+. +|...+.......|.-..+-.++.+++..+-.. .+++ | +.++.++ ..++-+.- T Consensus 211 ~~--~l~n~---~~~~s~~~~~~~~g~v~~v~Gv~V~~Sn~lP~~-~~t~~~lg~a~n~~~~d~~~~~~~~-~~~~Al~t 283 (335) T protein:vir:78 211 HD--KLMSV---EYQATGATNDYVKSRVAILNGVKVLETPRFATK-AISAHPLGRHFNVSAEEAERQIALF-LPSKTLIT 283 (335) T ss_pred cc--ccccc---cccccccccccccceeEEeeceEEEeeccCCCC-CCccccccccCCcccccccceEEEE-EecceEEE Confidence 20 01111 222222111112344445555555555443221 1110 0 1122222 22332222 Q ss_pred eeccchhcc-cccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 312 ANPIPFRML-APQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 312 ~vp~~~~~~-~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...++++.- .-+.+...|.+.+... -|+-++||++++-+... T Consensus 284 ~~~~~~~~e~~~~~~~~~~~i~~~~a-~G~g~lRPe~a~~i~~t 326 (335) T protein:vir:78 284 AQVAPVQAKLWEDHDQFSWVLDTFQM-YNIGARRPDTAGAIELK 326 (335) T ss_pred EEEEecccceeeccchhhHhhhHHHH-cCCcccCcceEEEEEec Confidence 222333211 1123344566666665 47999999999999988 No 149 >protein:vir:100057 Length: 375 # NCBI annotation: T7-like capsid protein # Family: family:all:975 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214206;genbank:gi:61806429;genbank:GeneID:3294737 Probab=89.13 E-value=0.028 Score=29.09 Aligned_cols=305 Identities=9% Similarity=0.025 Sum_probs=125.8 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhh-HHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGI-AFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~-~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~ 101 (354) |...+...-. +.+. ++..-.-.+++.. .|+....-.|+... ...-..+.++.+.+ +- +..++.+... T Consensus 1 ~~~~~~~~~~---~~n~-~t~~~~~~~~~~~al~le~f~geV~~~f----~~~si~~~~~~~rt-i~-~Gksv~f~~i-- 68 (375) T protein:vir:10 1 MANANQVALG---RSNL-STGTGYGGATDKYALYLKLFSGEMFKGF----QHETIARDLVTKRT-LK-NGKSLQFIYT-- 68 (375) T ss_pred CccccccccC---cccc-CCccccccccchHHHHHHHHhHHHHHHH----HHHHhhhccccccc-cc-cCceEEEEee-- Confidence 3222111100 0000 0000011122333 34433333344333 33333344444422 11 2345544443 Q ss_pred cCceeE--ecCCC--CccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee-- Q lcl|NC_020082. 102 VTMGKF--IGANG--QDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF-- 175 (354) Q Consensus 102 ~G~a~~--~~~~~--~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~-- 175 (354) |..++ +..+. ++-|..+....+....+=.. .-|..-+.+++.++ ...++-.+-.+.+..++++..|+.++- T Consensus 69 -G~~t~~~~t~G~~i~~~~~~d~~~te~~l~ID~~-~y~~~~VdDiD~aq-a~~Dlr~e~s~~~G~aLA~~~D~~i~~~l 145 (375) T protein:vir:10 69 -GRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDL-LISSAFVYDLDETL-AHYELRGEISKKIGYALAEKYDRLIFRSI 145 (375) T ss_pred -eeeEEeeecCCcCcCCccccCCCCCceEEEecch-hhhhhhHhhHHHHh-cCchhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 44432 22221 22233333333333333221 12344457788775 566777888889999999999998862 Q ss_pred --e-ehhhCce--eeeecCCcccee---ccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccC Q lcl|NC_020082. 176 --G-DSSRGMY--GLFNNPNVTLSS---ATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLM 247 (354) Q Consensus 176 --G-~~~~gi~--GLlN~p~~~~~~---~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~ 247 (354) | .....+. ..+. |+..... ....=...|++.+++.|.++..+|.++.--.. ...++|+|..|..|..-.- T Consensus 146 ~kaa~~~~p~~~~~~~~-~Gg~~i~~~sg~~~~~~~ta~~~~~ai~~a~~~Lde~~VP~~-~R~~vv~P~~y~~Ll~~~d 223 (375) T protein:vir:10 146 TRGARSASPVSATNFVE-PGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGVSSQ-GRCAVLNPRQYYALIQDIG 223 (375) T ss_pred HHhhhhccccccccccc-cCcceeeeccccccccccCHHHHHHHHHHHHHHHhhcCCCCC-CCEEEeChHHHHHHHhcCC Confidence 1 1111100 0000 1111111 11112235699999999999999887522112 3578899999988853210 Q ss_pred CC-CCCchHHHHHHhcCceeecccccceEEeeceeeecccccc------------------------------------- Q lcl|NC_020082. 248 TG-YTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAAN------------------------------------- 289 (354) Q Consensus 248 ~~-~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~------------------------------------- 289 (354) ++ ..+. +|. .++.. ..|.-..|..++.+++..+-.. T Consensus 224 ~~~~~n~---d~~-~~~~~--~~g~v~~i~Gv~V~~Sn~lP~~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~~~~~g~~ 297 (375) T protein:vir:10 224 SNGLVNR---DVQ-GSALQ--SGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVN 297 (375) T ss_pred ccceeee---ccc-cccee--ccceEEEEeceEEEEeccccccccccccccccccccchhhhhccccccCCcceeecccc Confidence 00 0010 110 00000 0111112222222222211100 Q ss_pred --ccccC---cceEEEEEEcCc-ceEEEeeccchhcc----cccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 290 --GVSNS---NKPRYMVYDKSD-RNLAMANPIPFRML----APQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 290 --g~g~~---g~d~~v~y~~d~-~~~~~~vp~~~~~~----~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ..++. ++.+.+++.++. -++++ ++++.- ..+++-..|.+-..... |+.+.||++++-+..+ T Consensus 298 ~~y~~d~~~~~~~~~~~~~~~A~g~v~~---~~~~~~~~~~~~~~~~q~~~i~~~~a~-G~~~lrp~~av~l~~~ 368 (375) T protein:vir:10 298 NDYGTNAELGAKSCGLIFQKEAAGVVEA---IGPQVQVTNGDVSVIYQGDVILGRMAM-GADYLNPAAAVELYIG 368 (375) T ss_pred ccccccccccCceEEEEEchhheeeeee---eccccccccchhhheeeeeeeeeeeee-ccCccCceeEEEEecC Confidence 00011 223334443221 12221 222211 11233334444444444 6889999998888776 No 150 >protein:vir:1541 Length: 347 # NCBI annotation: major capsid protein 10A # Family: family:all:975 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052109;swissprot:trembl:q9t107;genbank:gi:9634035;uniprot:Q9T107;genbank:GeneID:1262383 Probab=87.48 E-value=0.038 Score=28.34 Aligned_cols=304 Identities=11% Similarity=0.035 Sum_probs=123.1 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |......-.. + -.-+ .++. .++.-..|+....-.++. .....-..+.++.+.+ .. +..++.+..... T Consensus 1 ma~~~~~~~~-~-t~~~--~~~~--~~~~~a~~ie~f~g~V~~----~f~~~s~~~~~~~~~~-~~-~G~sv~i~~ig~- 67 (347) T protein:vir:15 1 MANIQGGQQI-G-TNQG--KGQS--AADKLALFLKVFGGEVLT----AFARTSVTMPRHMLRS-IA-SGKSAQFPVIGR- 67 (347) T ss_pred CCccccCCcc-c-cccc--cCCC--cchHHHHHHHHHHHHHHH----HHHHhhhhhhcccccc-cc-ccceeEeeeccc- Confidence 1110000000 0 0000 0111 112122355433333333 3333334445554432 11 233554444322 Q ss_pred CceeEecCCCCccce--eeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeee----- Q lcl|NC_020082. 103 TMGKFIGANGQDLPR--VAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYF----- 175 (354) Q Consensus 103 G~a~~~~~~~~dip~--v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~----- 175 (354) ..++.+.. +.+++. -+....+....+=.+ .-+..-+.+++.++ ...++-.+-.+.+..++++..|+.++- T Consensus 68 ~t~~~~~~-g~~l~~~~~~~~~~e~~ltID~~-~~~~~~VddlD~~q-~~~D~~~~~~~~~g~aLA~~~D~~i~~~l~~~ 144 (347) T protein:vir:15 68 TKAAYLKP-GENLDDKRKDIKHTEKVIHIDGL-LTADVLIYDIEDAM-NHYDVRAEYTAQLGESLAMAADGAVLAELAGL 144 (347) T ss_pred eeeeeecc-CCCCCCCCCCCccceEEEEechh-hhhhHHhhhHHHHh-cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 12222222 122221 112222333333221 11233446777775 566788888889999999999988872 Q ss_pred eehh---hCceeeeecCCccc-eec-ccccc--ccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhccC Q lcl|NC_020082. 176 GDSS---RGMYGLFNNPNVTL-SSA-TKDYK--TMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQLM 247 (354) Q Consensus 176 G~~~---~gi~GLlN~p~~~~-~~~-~~~w~--~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~~ 247 (354) .+.. ....+....+++.. .+. +++.. ..+++.|++-|.++..+|.++ .+. ....++|+|..|..|..... T Consensus 145 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~d~~~~a~~~Lde~--~VP~~gR~~vv~P~~y~~LL~~~~ 222 (347) T protein:vir:15 145 VNLPDASNENIEGLGKPTVLTLVKPTTGDLTDPVELGKAIIAQLTIARASLTKN--YVPAADRTFYTTPDNYSAILAALM 222 (347) T ss_pred hhccccccccccccCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhc--CCCccCCEEEeCHHHHHHHhcccc Confidence 1111 11111111111111 111 11222 124677888888888888765 331 23689999999999976421 Q ss_pred CCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccc------cCcce----------EEEEEEc------C Q lcl|NC_020082. 248 TGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS------NSNKP----------RYMVYDK------S 305 (354) Q Consensus 248 ~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g------~~g~d----------~~v~y~~------d 305 (354) .... +|.-. .. ..+|.-..+-..+++++..+...... ..|.. ..++|++ . T Consensus 223 ~~~~-----d~~~~-~~--~~~G~Vg~i~G~~V~~Sn~lp~~~~t~~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~l~~h 294 (347) T protein:vir:15 223 PNAA-----NYQAL-ID--HERGTIRNVMGFEVVEVPHLTAGGAGDTREDAPADQKHAFPATSSTTVKVALDNVVGLFQH 294 (347) T ss_pred cccc-----ccccc-cc--ccceEEEEEeceEEEecccccccccccccccccccccccccccccceeeeccccceeeeec Confidence 1111 11000 00 11233334444455554443221110 01111 1111111 1 Q ss_pred cceEEEeeccc--hhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 306 DRNLAMANPIP--FRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 306 ~~~~~~~vp~~--~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++-+.....++ ++....+ +.....+...... |+-+.||.+++-.-.- T Consensus 295 ~~A~g~v~~~~~~~e~~~~~-~~~~d~i~~~~~~-G~~vlrP~~av~~~~~ 343 (347) T protein:vir:15 295 RSAVGTVKLKDLALERARRA-NYQADQIIAKYAM-GHGGLRPEAAGAIVLP 343 (347) T ss_pred cceeeeeEeeceeeeecccc-hhhhhhhehhhhc-CCceeccccEEEEecC Confidence 11111111111 1111122 2223333344433 8999999998876443 No 151 >protein:vir:96666 Length: 462 # NCBI annotation: ORF016 # Family: family:all:2450 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238545;genbank:gi:66391271;genbank:GeneID:5130448 Probab=87.43 E-value=0.039 Score=28.32 Aligned_cols=309 Identities=13% Similarity=0.114 Sum_probs=134.0 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccch-h-hhhHHHHHHHHHHHHHHHHhhh--cccc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDA-D-GGIAFYISQLAGIEATVYETPY--GDIT 76 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA-~-~~~~fl~~~L~~id~~v~e~~~--~~l~ 76 (354) |-+.+ ++ --..+.+++++. + -.|.+...+.-+++. + .++++-. +.+|+.+...-+ .+++ T Consensus 1 ~~~~~----------~~--~~~~~~~~~~~~-e-~~~KS~~tg~g~~p~~q~~~gAlR~---esL~~~i~~Lt~~~~~~~ 63 (462) T protein:vir:96 1 MHKDT----------NL--TAEQNKYADKFQ-E-EVMKSYQTGYGITPDTQVDAGALRR---EILDDQITMLTWTQDDLI 63 (462) T ss_pred Ccccc----------cc--chhhhhhhchhh-H-HHHHHHhcCCCcCCccccccchhhh---hhhhhhhheeeecccchh Confidence 22111 11 011222333332 1 234444333322222 2 2334444 456666654322 2233 Q ss_pred chhhccccCCCCCceeeEE-EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcch Q lcl|NC_020082. 77 YRSDVPMAANIPEYADTWM-YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDA 155 (354) Q Consensus 77 ~r~~v~v~~~~~~~~~~~~-~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~ 155 (354) .-..++-. +.......++ |.....+|.+..++... ..+..+.++.|++..+..++..-..++..-. +-.=.+... T Consensus 64 ~~~~i~k~-~a~sTv~~y~~~~~~G~~g~~~f~~E~g-~~~~~d~~~~R~~~~~k~l~~t~~vsi~~tl--~n~~~d~~~ 139 (462) T protein:vir:96 64 FYREISRR-PAQSTVQKYDVYLRHGNVGHSRFVREVG-VAPVSDPNIRQKTVEMKYVSDTKNLSIASTL--VNNIQDPMQ 139 (462) T ss_pred hhhhcCCc-hhhhhhhhheeeeccCcccccccccccc-ccccCCCceEEEEEEEEEEeeeeeechhhhh--ccchhhHHH Confidence 33333321 2222222222 22444556666665543 3466778888999999999988888765433 112224447 Q ss_pred HHHHHHHHHHHHHhhheeeeeehhhCceee---eecCCccceeccccccccCHHHH-HHHHHHHHHHHHHHhCCcccccE Q lcl|NC_020082. 156 EQARLAFRGAEEHSQSVAYFGDSSRGMYGL---FNNPNVTLSSATKDYKTMNGQEL-FNMLNAPIFSVINLSRRFHVPNT 231 (354) Q Consensus 156 ~k~~aA~~~~~~~~n~~~f~G~~~~gi~GL---lN~p~~~~~~~~~~w~~~T~~ei-~~di~~~~~~l~~~s~g~~~p~~ 231 (354) ...+.|...+++......||||+.+.=.+- |+..|+...-.+.+--++-++.. .+.|+.+-..+ +.++-.|+- T Consensus 140 ~~~~dai~~~a~tiE~a~Fygds~l~~~~~~~gleFDGl~~lI~~~NViDarG~~Ls~~~ln~aa~~i---~~~fGt~TD 216 (462) T protein:vir:96 140 ILTEDAIAVVAKTIEWASFYGDASLTADPTGQGLEFDGLAKLIDKDNVIDAKGESLTETLLNRSAVLI---GKSFGTATD 216 (462) T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCccccccchhhhhhhcCCCceeecCCCCccHHHHhhhhhhc---ccccCChhh Confidence 777788899999999999999976543221 23333211101101000111111 24444443222 457788999 Q ss_pred EEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEE Q lcl|NC_020082. 232 ALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAM 311 (354) Q Consensus 232 L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~ 311 (354) +.||......|....++...- +...|......|.+ ++.+.+..+...-- |+ ... ++|.++.- T Consensus 217 ~~~p~~v~a~f~~~~l~~qrv------~~~~n~g~~~~G~~-----v~~f~s~~G~I~L~---~s---~~m-~~~~i~~~ 278 (462) T protein:vir:96 217 AYMPIGVHADFVNSVLGRQMQ------LMQDNSGNVNAGYN-----VQGFYSSRGFIKLH---GS---TVM-ENELILDE 278 (462) T ss_pred eecchHHHHHHHHhhcCceEE------EEcCCCCceeeeee-----ccceeeeeeeeeeC---Cc---eec-Cccccccc Confidence 999999999987543322110 11111111111111 11111110000000 00 000 01111110 Q ss_pred ------eeccchhcccc-------------cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 312 ------ANPIPFRMLAP-------------QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 312 ------~vp~~~~~~~~-------------~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+|.|-+.... .....+|++...+.-|.- .|..++..+++ T Consensus 279 ~~~~~p~ap~~~~vsaTv~t~~~g~f~~~~d~~~y~Y~V~avs~dgeS---~PS~~VtaTva 337 (462) T protein:vir:96 279 SLQPLPNAPQPATVKATVETGKKGLFTDEHDRAELTYKVVVNSDDAQS---APSEAVTATVN 337 (462) T ss_pred ccccCCCCCCCCceeEEEEeCCCCCCCCccCceeEEEEEEEECCCCcc---ccceeeEeeee Confidence 12222221111 112234555554443311 46666677766 No 152 >protein:vir:1084 Length: 437 # NCBI annotation: capsid protein # Family: family:all:21 # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076738;genbank:gi:13095848;genbank:GeneID:920418 Probab=86.10 E-value=0.048 Score=27.82 Aligned_cols=303 Identities=9% Similarity=-0.067 Sum_probs=121.6 Q ss_pred CcccccchHHhhhccce----------eecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWL----------VHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYET 70 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~ 70 (354) ...+... ...++..+. ...+.-...+....... ...+ .....+++ ++ +++. +.+...+.+ T Consensus 109 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~~~--~~~~~~~~-~g-~lvp--~~~~~~i~~- 178 (437) T protein:vir:10 109 KDKKTVK-DEEKRDAGGLQDMKLKVGGEIADKKVTAFADYLKTG--EVRD--VTGIALKD-GK-VIIP--ETILTPEKE- 178 (437) T ss_pred HHHHHHH-HHHHHhHHHHhHHHHHHHHHHHHhhhhhhHHHHHhh--hhhh--hhhccccc-cc-ccch--HHHHHHHHH- Confidence 0000000 000000000 00000000000000000 0000 11112222 22 3333 223344443 Q ss_pred hhccccchhhccccCCCCCceeeEEEeeec-ccCceeEecCCCCccce-eeeccceeEEEEEEEEeeeeecHHHHHHHHH Q lcl|NC_020082. 71 PYGDITYRSDVPMAANIPEYADTWMYRSYD-GVTMGKFIGANGQDLPR-VAQSAQMHTVPLGYAGNECHYTLDEMRKSAA 148 (354) Q Consensus 71 ~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~-~~G~a~~~~~~~~dip~-v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~ 148 (354) ....-..+.++.+... ...+..+.... ..+.+.+++..+. +|. .+..++......+.++.-+.+|..=|+.+ T Consensus 179 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~-~~e~~~~~~~~v~~~~~k~~~~~~is~ell~ds-- 252 (437) T protein:vir:10 179 VHQFPRLGSLVRTESV---TTTTGKLPIFNNSTDLLTAHTEYGQ-TTKNATPVITPILWDLKTYTGGYVFSQELISDS-- 252 (437) T ss_pred hhhhhhhhhcceeEee---ccCceeeEEeecccccccccccccc-ccccccccceeeeeehhheeeehhhhHHHHhhh-- Confidence 2233344444443221 11223344432 2344555555433 343 23456677777788887777876555443 Q ss_pred hCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHH-HHHHHhCCcc Q lcl|NC_020082. 149 MNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIF-SVINLSRRFH 227 (354) Q Consensus 149 ~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~-~l~~~s~g~~ 227 (354) ..++..--....+.++...+|..+++|+... .+..+++ .+. +++.+++. .+.. ... T Consensus 253 -~~~~~~~i~~~l~~~~~~~~~~~i~~g~g~~----------~~~~~~~-----~~~----~~~~~~~~~~l~~---~~~ 309 (437) T protein:vir:10 253 -SYDWQAELQSRLIELRDNTDDSLIITALTDG----------IKKTTST-----YLL----GDLKKVLNVTLKP---QDS 309 (437) T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhhhccc----------ccccccc-----cch----hhHHHHHHhhhhh---hhh Confidence 3467777777888999999999999996431 1111111 122 33333333 2211 122 Q ss_pred cccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcc Q lcl|NC_020082. 228 VPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDR 307 (354) Q Consensus 228 ~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~ 307 (354) ..-..+|+|..|..|.+- -+..|.-++. .++ ..|.+-++...|......-... .+..|.. .++|-+=.+ T Consensus 310 ~~~~~~~~~~~~~~l~~l--kd~~g~~~~~----~~~---~~~~~~~l~G~pv~~~~~~~~~-~~~~~~~-~~~~gd~~~ 378 (437) T protein:vir:10 310 AAASIVMSQSAYNLFDMA--TDAMGRPLLQ----PNV---TAATGYTLLGKTVVIVDDKLFP-SASAGDV-NIVVAPLKK 378 (437) T ss_pred cCCEEEEcHHHHHHHHHh--hccCCCeeec----cCc---cCCCCcccccceeEEecccccC-CcCCCce-EEEEeeccc Confidence 223689999999998653 2334432221 110 1122223333333322110001 1112222 223321122 Q ss_pred eEEEeeccchhccccc-ccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 308 NLAMANPIPFRMLAPQ-MASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 308 ~~~~~vp~~~~~~~~~-~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+.+..-+.+++.-.. ............|+ ++.+..|.+|+++-.- T Consensus 379 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~r~-d~~~~~~~a~~~l~~~ 425 (437) T protein:vir:10 379 AVINFKLTEITGQFQDTYDIWYKQLGIFLRQ-NVVQASKDLIVNLTGK 425 (437) T ss_pred cEEEEeeeceEEEEecccccccceeeEEEEE-ccEEecccceEEEEee Confidence 2222222223221111 11122233445666 4666789999986543 No 153 >protein:vir:94933 Length: 330 # NCBI annotation: putative phage structural protein # Family: family:all:1120 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239278;genbank:gi:66392060;genbank:GeneID:5076578 Probab=78.79 E-value=0.11 Score=25.82 Aligned_cols=304 Identities=12% Similarity=0.010 Sum_probs=135.7 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhh Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSD 80 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~ 80 (354) .-|-+=| +.++ |=.+-++++ .++|-+. |.|++ ..+.. ..+...|+|...+.-...++ T Consensus 2 ~~~~~~~---~~~~-~~~~~~~~p---------~l~m~al------TLaea--~~l~~--d~~~~~VIE~l~~~s~iL~~ 58 (330) T protein:vir:94 2 VRICTPP---LRGR-WRTLTHQFP---------ELKMPTV------TLAES--AKLSQ--DHLVSGLIETIVEVNPLYEM 58 (330) T ss_pred ceecCCc---cccc-eeehhcccc---------ccchhhh------hhhHH--hhcCc--hhhHHHHHHhhhccchHHhh Confidence 1111111 1010 111112222 2345442 34442 23332 35577888888777666677 Q ss_pred ccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCC--cchHHH Q lcl|NC_020082. 81 VPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMP--IDAEQA 158 (354) Q Consensus 81 v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~--ld~~k~ 158 (354) +|...- ..+ .+.|......+.+.+..-+...-|.-.....+.+..+..++..++++.+- +...|-+ ...... T Consensus 59 lpf~~v-e~~--~~~~~r~~~lp~a~~r~~n~~~~~~~~~Tf~q~t~~l~~l~~~~~Vd~~i---adl~g~~~d~~~~q~ 132 (330) T protein:vir:94 59 MPFTEI-EGN--ALAYNRENVLGDVQFLAVGGTITAKNPATFTKVTSELTTLIGDAEVNGLI---QATRSDFMDQTSVQV 132 (330) T ss_pred cccccc-cCC--cceeeeeecCCcceeeeccccccccCcceeeeeeechhhhhhhHHHHHHH---HHhcCCHHHHHHHHH Confidence 764321 111 23333333334444433221111111111223333444545444443322 2233443 334555 Q ss_pred HHHHHHHHHHhhheeeeeehh-hCceeeeecC-CccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCH Q lcl|NC_020082. 159 RLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNP-NVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFP 236 (354) Q Consensus 159 ~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p-~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p 236 (354) ....+++.+++.+..+||+.. .++.||+..= +-+...++..=..-| ++|+.+++..++.. . -.|..|+++. T Consensus 133 ~~~ieal~~~~e~~linGDs~~~~F~GL~~~~~~~q~i~tg~~gg~~T----~d~LDeLl~~v~~~-~--g~~~~~l~n~ 205 (330) T protein:vir:94 133 ASKAKSIGRQYQASMITGDGTGNSFQGMMGLVAASQTISAGANGGTLT----FELLDQLLDLVKDK-D--GQVDYLMSSF 205 (330) T ss_pred HHHHHHHHHHHHHHhhccCCCCccccchhhcCCcccEEecCCCCCCCC----HHHHHHHHHHhcCC-C--CCCcEEEech Confidence 677779999999999999855 4677997421 112222211112233 47778888887642 1 2688999877 Q ss_pred HHHHHHhhccC-CCCCC---chHHHHHHhcCceeeccccc-ceEEeeceeeecccccc-c-cccCcceEEEEEEcC---- Q lcl|NC_020082. 237 DLWNQANNQLM-TGYTD---RTVMQHFMEANSYTLLTGNE-LDIQIRFQLDAAELAAN-G-VSNSNKPRYMVYDKS---- 305 (354) Q Consensus 237 ~~~~~L~~~~~-~~~~~---~Tvl~~l~~n~~~~~~~g~~-l~I~~~~~L~~~~~~~~-g-~g~~g~d~~v~y~~d---- 305 (354) .....|..-.. ....+ .++.. -|++ +....+|.+.+...... + ...+|+....+..-. T Consensus 206 a~~r~I~a~~R~~~~~~v~~~~~~~-----------~G~~v~~~~GvPi~~~d~ip~~~~~~~~~~ttsIyav~~G~~~~ 274 (330) T protein:vir:94 206 AMRRKYFSLLRALGGAAIGEVMTLP-----------SGRQIPTYRGVPWFVNDFIPSNMTQGTATNATAIFAGTFDDGSN 274 (330) T ss_pred hHHHHHHHHHHhccCCCCCCccccc-----------CCCEEeeeCCeEEEecccccCCCCcccCCCceeEEEEeeccccc Confidence 76555532211 11111 11111 1222 23444454444332221 1 122344444444422 Q ss_pred -cceEEEeecc----chhccc-ccccC-ceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 306 -DRNLAMANPI----PFRMLA-PQMAS-LGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 306 -~~~~~~~vp~----~~~~~~-~~~~~-~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .-+..++-+. ..++.. .+.+. ..|.+..+ -|+-++-|.+++.++-- T Consensus 275 ~qgV~Gl~~~g~~glsVr~~G~~~~k~v~~~~v~~y---~~~av~~~~a~~~L~~V 327 (330) T protein:vir:94 275 KYGIAGLTARGSAGLRVQNVGAKENADETITRVKMY---CGFANFSQLGLAAIKGL 327 (330) T ss_pred ccceEeecCCCCCcceeeeCCCccccceeeEEEEEe---eeeEEechhheeeeccc Confidence 2345554332 223332 23333 34555443 35778888888876544 No 154 >protein:vir:105645 Length: 400 # NCBI annotation: putative major capsid protein # Family: family:all:2806 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425009;genbank:gi:83571757;uniprot:Q2WC43;genbank:GeneID:3837286 Probab=77.99 E-value=0.12 Score=25.65 Aligned_cols=295 Identities=8% Similarity=-0.023 Sum_probs=131.9 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.+..- .++-.-.++.-..||....-.++...-+ .=..+.++.+.+ +. +..|+.+... T Consensus 1 Ms~~n~~t-----------~p~~~gsg~~~aL~Le~f~GeV~taF~~----~si~~~~~~vRt-I~-~gkS~qf~~l--- 60 (400) T protein:vir:10 1 MSTPNNLT-----------NVAVSASGEVDSLLIEKFNGKVNEQYLK----GENIMSYFDVQT-VT-GTNTVSNKYL--- 60 (400) T ss_pred CCCCcccc-----------ccccccccchhhhHHhHhcchHHHHHHH----Hhhhcccceeee-ec-ccceEEEEEe--- Confidence 22221000 0000000112223554444444444422 222223333332 11 2334444433 Q ss_pred CceeEe-cCCCCccceeeecccee--EEEEEEEEeeeeecHHHHHHHHHhCCC-cchHHHHHHHHHHHHHhhheeee--- Q lcl|NC_020082. 103 TMGKFI-GANGQDLPRVAQSAQMH--TVPLGYAGNECHYTLDEMRKSAAMNMP-IDAEQARLAFRGAEEHSQSVAYF--- 175 (354) Q Consensus 103 G~a~~~-~~~~~dip~v~~~~~~~--~~pv~~~~~~~~~~~~El~~a~~~g~~-ld~~k~~aA~~~~~~~~n~~~f~--- 175 (354) |+.+.- -..+..+-.....-++. ++-=..+..-+-| +|+.++ .-.+ +..+-....-.+++++.|+.++- T Consensus 61 G~s~a~y~~pG~~ldg~~~~~dk~~ItIDtLL~a~~~V~---dlDd~q-~~yD~vRse~s~e~G~ALA~~~Dq~iiq~i~ 136 (400) T protein:vir:10 61 GETELQVLAPGQSPAATSTQADKNQLVIDATVIARNTVA---HLHDVQ-GDIDSLKPKLATNQAKQLKKMEDEMLIQQML 136 (400) T ss_pred eeeEEeeecCCCCcCCCCcccCcEEEEeCceeeecchhh---hHHHHh-hccccccHHHHHHHHHHHHHHHHHHHHHHHH Confidence 333321 11111111111112222 2222333333444 444443 4555 56666667778888888885542 Q ss_pred --eeh----hhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCc-ccccEEEeCHHHHHHHhhc--c Q lcl|NC_020082. 176 --GDS----SRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRF-HVPNTALMFPDLWNQANNQ--L 246 (354) Q Consensus 176 --G~~----~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~-~~p~~L~l~p~~~~~L~~~--~ 246 (354) |.. ..+..|...++.....+....=...+++++...|.++..+|.++ .+ ..-..+++||+.|..|... . T Consensus 137 ~a~~a~t~~~~~~~~g~~~g~s~~v~~~~~~~~~~~~~l~~A~~~A~~~LdEk--dVP~~d~vvl~pp~~Ys~Ll~~dkL 214 (400) T protein:vir:10 137 LGGIANTQAKRTNPRVKGHGFSVNVEVNEGEALVNPQYVMAAVEFALEQQLEQ--EVDISDVAILMPWRYFNVLRDADRI 214 (400) T ss_pred HhcccccccccccCCccccccceeecccccccccCHHHHHHHHHHHHHHHHhc--CCCccceEEEcCHHHHHHHHhCCcc Confidence 211 11222332222211121122222346889999999999988764 32 2346888899999877643 2 Q ss_pred CCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccc-c-----------cc-------ccCcceEEEEEEcCcc Q lcl|NC_020082. 247 MTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAA-N-----------GV-------SNSNKPRYMVYDKSDR 307 (354) Q Consensus 247 ~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~-~-----------g~-------g~~g~d~~v~y~~d~~ 307 (354) ++- +|...++ ..-..|.-+.+-.++.+++..+-. . +. ++-.+-++++|.++. T Consensus 215 vnr-------df~~s~~-g~~~~g~v~~v~Gv~Iv~Sn~lP~~a~~~~~~~lS~a~~G~~y~~t~d~s~~~av~F~~sA- 285 (400) T protein:vir:10 215 VDK-------SYTISQS-GATIQGFVLSSYNCPVIPSNRFPKYSQGQKHHLLSNEDNGYRYDPIAEMNGAIAVLFTADA- 285 (400) T ss_pred cch-------hccccCC-CccccceEEEEeceEEEeeCcCCcccCcccccccccCCCCccCCccccccceeEEEEehhh- Confidence 221 1211110 011234445555555555554421 0 00 222355677775442 Q ss_pred eEEEeeccchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 308 NLAMANPIPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 308 ~~~~~vp~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +.-.-.++++.-- -+.+...|.+.+.... |+..+||.|++-+-.+ T Consensus 286 -v~tvk~~~lt~~~~~d~r~~~~~id~~~a~-G~g~~RPeaa~vv~~~ 331 (400) T protein:vir:10 286 -LLVGRSIDVIGDIFYEKKEKTYYIDTFMSE-GAIPDRWEAVSVVTTK 331 (400) T ss_pred -eEEEEeeccccccccchhhHHHHHHHHHHh-CCcccchhheEEEEec Confidence 1111113333221 2445566767677665 6999999999887776 No 155 >protein:vir:97397 Length: 517 # NCBI annotation: major capsid protein # Family: family:all:11745 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762590;genbank:gi:115304291;genbank:GeneID:5130600 Probab=77.98 E-value=0.12 Score=25.65 Aligned_cols=312 Identities=11% Similarity=-0.031 Sum_probs=107.3 Q ss_pred CcccccchHHhhh-----ccceeecCccccccccchhhhhh--hhhh-cCCcc----c--cchhhhhHHHHHHHHHHHHH Q lcl|NC_020082. 1 MAIKTIDAQTIQG-----NQWLVHKGYVSRNGDQWVINNTA--LDAI-GNPNV----M--LDADGGIAFYISQLAGIEAT 66 (354) Q Consensus 1 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a--mda~-~~~~~----~--~dA~~~~~fl~~~L~~id~~ 66 (354) -.+..++++.-+. .-+.......+............ .... ..... . ......+.++.. ..+-.. T Consensus 181 e~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~ 258 (517) T protein:vir:97 181 KTVSELAANLMKQRESEKILGVEALKVTPEATEFLKTREAEVAYMSASLTKDPKAAWTAELKERGISGMPAP--AGILKR 258 (517) T ss_pred hhhhhhhhhHHHHHHhhhhcccccccccchhhHHHHHHHHHHHHHHhcccccccceeeeecccccccccccc--hHHHHH Confidence 1222222222110 00100000000000000000000 0000 00000 0 000111112211 112222 Q ss_pred HHHhhhccccchhhccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHH Q lcl|NC_020082. 67 VYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKS 146 (354) Q Consensus 67 v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a 146 (354) +..........++++++.. ++ ...+ ..-...+.+.++.. +...|..+...+....++..++.-+..|.+-|+.+ T Consensus 259 i~~~~~~~~~i~~~~~~~~-i~--~~~~--~~~~~~~~a~~~~e-G~~kp~s~~tf~~~~~~~~~ia~~~~~S~qll~Ds 332 (517) T protein:vir:97 259 IQDAVNDEGSLLPFIRHEN-LP--TLVV--GGDNALTQGTGHTT-GTDKTESNITLQTRVLTPQYVYKYIKLPKIVMNSN 332 (517) T ss_pred HHHhhhhhccceeeeeecc-cc--ceee--ecccccceeeeeec-CCcccccccceeeEEeeHhhhhhhhhhhHHHHHHh Confidence 3222222223334444322 11 1111 11111122333333 23356556666677777777777777776666555 Q ss_pred HHhCCC-cchHHHHHHHHHHHHHhhheeeeeehh-hCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 147 AAMNMP-IDAEQARLAFRGAEEHSQSVAYFGDSS-RGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 147 ~~~g~~-ld~~k~~aA~~~~~~~~n~~~f~G~~~-~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) ..--.+ |..--....+..+++.|++-+++|+.. .+..|+++..+.... .+.. .+.+..+++..|..++.. T Consensus 333 ~~dd~~~l~s~i~~~l~~~l~~~ee~a~l~GdGtg~~~~gi~~~a~~~~~-~~~~-~~~~~~d~i~~l~~a~~~------ 404 (517) T protein:vir:97 333 ATDIAGAILTYVMNRLPDMVIMAVNRAIIMGGVTGVSETQIYPVVGDAWA-TNVT-GTTNIQELLEKLSVATPK------ 404 (517) T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccccccc-cccc-ccchHHHHHHHHHHHhhh------ Confidence 321111 445566678899999999999999863 344455543221100 0000 011122222222222211 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEee----ceeeeccccccccccCcceEEE Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIR----FQLDAAELAANGVSNSNKPRYM 300 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~----~~L~~~~~~~~g~g~~g~d~~v 300 (354) ...-.++|+|..|..|.+.. +..|.=+++-+.. .+++..+..+ +.+...... ++ ...+..+ T Consensus 405 --a~~a~~vmn~~t~~~I~klK--D~~G~Yl~~~~~~-------~~~~~~l~G~~~~~~~~~~~~~~---~~-~~~~y~i 469 (517) T protein:vir:97 405 --AADSTLVIHRNDLAAIRFLK--DKNGNYVFPVGVS-------NQTIATHFGFNRLVQSVAVDEKT---AV-SLSGYVT 469 (517) T ss_pred --ccCCEEEECHHHHHHHHHhh--cCCCCeeccCcCC-------cccccccCCccccccccccCcee---Ee-eccccEE Confidence 11246899999999996543 3333222110000 1111111110 111000000 00 0001111 Q ss_pred EEEcCcceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +-...-+.++ .|-+ .... ..+-...++|| -|+.|.++++.-.- T Consensus 470 ~~~~g~~~~~-----~fd~---~~n~--~~f~~~~~~~g-~i~~~~r~a~~~~~ 512 (517) T protein:vir:97 470 NGSRGMEFEQ-----GTIL---VENN--KEYLFEMPISG-SLEYKGTTAYGTYT 512 (517) T ss_pred Eeecceeeee-----eeec---ccCc--eeEeeeeeecc-ccccccceEEEEEc Confidence 1111111111 1111 0011 11112344544 56666666664444 No 156 >protein:vir:105822 Length: 273 # NCBI annotation: gp6 # Family: family:all:2203 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655767;genbank:gi:109522090;genbank:GeneID:4157630 Probab=76.72 E-value=0.13 Score=25.40 Aligned_cols=264 Identities=10% Similarity=0.068 Sum_probs=118.8 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccC--CCCCceeeEEEeeecccCceeEecCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAA--NIPEYADTWMYRSYDGVTMGKFIGANG 112 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~--~~~~~~~~~~~~~~~~~G~a~~~~~~~ 112 (354) || +. .|+. +.+-..+.+.....+....++.... .+..| .++.++.....+.+... ..+ T Consensus 1 MA-----~~----------~~~p---e~~~~~v~~~~~~~lv~~~l~~~~~~~~~~~G-dtv~ip~~~~~~~~d~~-~~~ 60 (273) T protein:vir:10 1 MA-----FN----------NFIP---ELWSDMLLEEWTAQTVFANLVNREYEGTASKG-NVVHIAGVVAPTVKDYK-AAG 60 (273) T ss_pred Cc-----ch----------hhhH---HHHHHHHHHHHHhhhccchhhccccccccccC-ceEEEeecccccccccc-cCC Confidence 10 10 1222 2233445555555555555554321 23333 46777765544433211 111 Q ss_pred CccceeeeccceeEEEEEE-EEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCc Q lcl|NC_020082. 113 QDLPRVAQSAQMHTVPLGY-AGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNV 191 (354) Q Consensus 113 ~dip~v~~~~~~~~~pv~~-~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~ 191 (354) ..++.-+.+.+.....+-. ...++.++ +++..+.. .++. .-.+.+..+++...|+.++- ++..-+. T Consensus 61 ~~~~~~~~~~~~~~~tid~~~~~~~~i~--d~d~~~~~-~~~~-~~~~~~~~alA~~vD~~i~~---------~~~~a~~ 127 (273) T protein:vir:10 61 RQTSADAISDTGVDLLIDQEKSIDFLVD--DIDRVQVA-GSLE-AYTRAGATALATDTDKFIAD---------MLVDNGT 127 (273) T ss_pred CccCccccccceEEEEEeeeeecceEee--cHHHhhhh-ccHH-HHHHHHHHHHHHHHHHHHHH---------HHhcccc Confidence 1122222333334444422 34555554 55555433 3564 35666777888888776551 1100000 Q ss_pred cceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhc--cCCCCCCchHHHHHHhcCceeec Q lcl|NC_020082. 192 TLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQ--LMTGYTDRTVMQHFMEANSYTLL 268 (354) Q Consensus 192 ~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~--~~~~~~~~Tvl~~l~~n~~~~~~ 268 (354) +. . .+. .-++..+++.|.++..+|-+. ++. ....|+++|..|..|.+. ..... +.....+. .. T Consensus 128 ~~-~-~~~--~~~~~~~~~~i~~a~~~ld~~--~vP~~~R~lvv~p~~~~~L~~~~~~~~~~------~~~~~~~~--l~ 193 (273) T protein:vir:10 128 AL-T-GSA--PTDADDAFDLIAKALKELTKA--NVPNVGRVVVVNAEMAFWLRSSGSKLTSA------DTSGDAAG--LR 193 (273) T ss_pred cc-c-ccc--ccchhHHHHHHHHHHHHhhhc--CCCcCCCEEEECHHHHHHHhcchhhhhhh------hccccccc--ee Confidence 00 0 111 134677899999998888653 331 235899999999988642 11110 00000011 11 Q ss_pred ccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeec-cchhcccccccCceeEEeeeeeeeeEEEECcce Q lcl|NC_020082. 269 TGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANP-IPFRMLAPQMASLGITVPAEYKISGTEFRYPLC 347 (354) Q Consensus 269 ~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp-~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~a 347 (354) +|..-.+....+.++..+.. + .+ ...+++.++. +.+..- ..+..+..+ +...-.+..... .|+.+.||.+ T Consensus 194 ~G~ig~i~G~~v~~s~~lp~---~-~~-~~~~~~~~~A--~~~a~q~~~~e~~r~~-~~~~~~v~~~~~-yg~~v~~~~~ 264 (273) T protein:vir:10 194 AGTIGNLLGARIVESNNLRD---T-DD-EQFVAFHPSA--AAYVSQIDTVEALRDQ-DSFSDRIRALHV-YGGKVVRPTG 264 (273) T ss_pred eeeeeEEeceEEEEeccccc---C-Cc-cEEEEEeccc--eeeeeeeehhhcccCC-Ccceeeeeeeee-eeeeEeccce Confidence 23333444555555443321 1 11 1234444332 111100 011111112 222334444443 5788899999 Q ss_pred eeeeecC Q lcl|NC_020082. 348 AAYVDMA 354 (354) Q Consensus 348 i~y~D~~ 354 (354) ++-+=-+ T Consensus 265 ~~~l~~~ 271 (273) T protein:vir:10 265 VVVFNKT 271 (273) T ss_pred EEEEecc Confidence 9987766 No 157 >protein:vir:102605 Length: 273 # NCBI annotation: gp6 # Family: family:all:2203 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_655002;genbank:gi:109392192;genbank:GeneID:4157227 Probab=76.72 E-value=0.13 Score=25.40 Aligned_cols=264 Identities=10% Similarity=0.068 Sum_probs=118.8 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccC--CCCCceeeEEEeeecccCceeEecCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAA--NIPEYADTWMYRSYDGVTMGKFIGANG 112 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~--~~~~~~~~~~~~~~~~~G~a~~~~~~~ 112 (354) || +. .|+. +.+-..+.+.....+....++.... .+..| .++.++.....+.+... ..+ T Consensus 1 MA-----~~----------~~~p---e~~~~~v~~~~~~~lv~~~l~~~~~~~~~~~G-dtv~ip~~~~~~~~d~~-~~~ 60 (273) T protein:vir:10 1 MA-----FN----------NFIP---ELWSDMLLEEWTAQTVFANLVNREYEGTASKG-NVVHIAGVVAPTVKDYK-AAG 60 (273) T ss_pred Cc-----ch----------hhhH---HHHHHHHHHHHHhhhccchhhccccccccccC-ceEEEeecccccccccc-cCC Confidence 10 10 1222 2233445555555555555554321 23333 46777765544433211 111 Q ss_pred CccceeeeccceeEEEEEE-EEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCc Q lcl|NC_020082. 113 QDLPRVAQSAQMHTVPLGY-AGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNV 191 (354) Q Consensus 113 ~dip~v~~~~~~~~~pv~~-~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~ 191 (354) ..++.-+.+.+.....+-. ...++.++ +++..+.. .++. .-.+.+..+++...|+.++- ++..-+. T Consensus 61 ~~~~~~~~~~~~~~~tid~~~~~~~~i~--d~d~~~~~-~~~~-~~~~~~~~alA~~vD~~i~~---------~~~~a~~ 127 (273) T protein:vir:10 61 RQTSADAISDTGVDLLIDQEKSIDFLVD--DIDRVQVA-GSLE-AYTRAGATALATDTDKFIAD---------MLVDNGT 127 (273) T ss_pred CccCccccccceEEEEEeeeeecceEee--cHHHhhhh-ccHH-HHHHHHHHHHHHHHHHHHHH---------HHhcccc Confidence 1122222333334444422 34555554 55555433 3564 35666777888888776551 1100000 Q ss_pred cceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhc--cCCCCCCchHHHHHHhcCceeec Q lcl|NC_020082. 192 TLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQ--LMTGYTDRTVMQHFMEANSYTLL 268 (354) Q Consensus 192 ~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~--~~~~~~~~Tvl~~l~~n~~~~~~ 268 (354) +. . .+. .-++..+++.|.++..+|-+. ++. ....|+++|..|..|.+. ..... +.....+. .. T Consensus 128 ~~-~-~~~--~~~~~~~~~~i~~a~~~ld~~--~vP~~~R~lvv~p~~~~~L~~~~~~~~~~------~~~~~~~~--l~ 193 (273) T protein:vir:10 128 AL-T-GSA--PTDADDAFDLIAKALKELTKA--NVPNVGRVVVVNAEMAFWLRSSGSKLTSA------DTSGDAAG--LR 193 (273) T ss_pred cc-c-ccc--ccchhHHHHHHHHHHHHhhhc--CCCcCCCEEEECHHHHHHHhcchhhhhhh------hccccccc--ee Confidence 00 0 111 134677899999998888653 331 235899999999988642 11110 00000011 11 Q ss_pred ccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeec-cchhcccccccCceeEEeeeeeeeeEEEECcce Q lcl|NC_020082. 269 TGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANP-IPFRMLAPQMASLGITVPAEYKISGTEFRYPLC 347 (354) Q Consensus 269 ~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp-~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~a 347 (354) +|..-.+....+.++..+.. + .+ ...+++.++. +.+..- ..+..+..+ +...-.+..... .|+.+.||.+ T Consensus 194 ~G~ig~i~G~~v~~s~~lp~---~-~~-~~~~~~~~~A--~~~a~q~~~~e~~r~~-~~~~~~v~~~~~-yg~~v~~~~~ 264 (273) T protein:vir:10 194 AGTIGNLLGARIVESNNLRD---T-DD-EQFVAFHPSA--AAYVSQIDTVEALRDQ-DSFSDRIRALHV-YGGKVVRPTG 264 (273) T ss_pred eeeeeEEeceEEEEeccccc---C-Cc-cEEEEEeccc--eeeeeeeehhhcccCC-Ccceeeeeeeee-eeeeEeccce Confidence 23333444555555443321 1 11 1234444332 111100 011111112 222334444443 5788899999 Q ss_pred eeeeecC Q lcl|NC_020082. 348 AAYVDMA 354 (354) Q Consensus 348 i~y~D~~ 354 (354) ++-+=-+ T Consensus 265 ~~~l~~~ 271 (273) T protein:vir:10 265 VVVFNKT 271 (273) T ss_pred EEEEecc Confidence 9987766 No 158 >protein:vir:6378 Length: 346 # NCBI annotation: capsid protein E # Family: family:all:1021 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918991;genbank:gi:34610166;genbank:GeneID:2559600 Probab=76.43 E-value=0.14 Score=25.34 Aligned_cols=282 Identities=10% Similarity=0.027 Sum_probs=114.4 Q ss_pred hhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc-CceeEecCCCCccceeeeccceeEEEEE Q lcl|NC_020082. 52 GIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV-TMGKFIGANGQDLPRVAQSAQMHTVPLG 130 (354) Q Consensus 52 ~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~-G~a~~~~~~~~dip~v~~~~~~~~~pv~ 130 (354) -..|..++|+.. +.+.+..++-...+||-.. ...+.++.+....+. ..+..++......+.-....+....... T Consensus 1 ~d~f~~~~l~~~---i~~~p~~~~l~~~~fp~~~--~~~t~~i~i~~~~g~~~la~~v~~~~~~~~~~~~g~~~~~~~~p 75 (346) T protein:vir:63 1 MEIFDTLTLAGV---IQSGPALSMYWQGFYPNEI--TFDTDEILFDLVFKDKKLAPFVAPNVQGRVIAARGYTTKTFRPA 75 (346) T ss_pred CCccCHHHHHHH---HHhcCCccchhhhcCcccc--ccccceEEEEEecCceeeeeeecCCCCcceecccceeeeEeecC Confidence 124666666432 2222344555667777432 233455666554432 2233444443333322222223334455 Q ss_pred EEEeeeeecHHHHHHHHHhC------CCcc-------hHHHHHHHHHHHHHhh----heeeeee---hhhCceee-eec- Q lcl|NC_020082. 131 YAGNECHYTLDEMRKSAAMN------MPID-------AEQARLAFRGAEEHSQ----SVAYFGD---SSRGMYGL-FNN- 188 (354) Q Consensus 131 ~~~~~~~~~~~El~~a~~~g------~~ld-------~~k~~aA~~~~~~~~n----~~~f~G~---~~~gi~GL-lN~- 188 (354) .+.....++..|+...+.+. .+.. .++....++.++..++ ++...|. .+.++.-. ++. T Consensus 76 ~i~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~i~~~~E~m~~~al~~gki~~~g~~~~~~~vdfg 155 (346) T protein:vir:63 76 YVKPKDVINPNRTLKRRAGEQPIIGGMSLQERFQAVVADSQLEQRQRIENRIEWMCAMATIYGYVDVVGEAFPMQRVDFG 155 (346) T ss_pred ccCccceeCHHHHHHHhhhhhhccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeeCCceeEEEEeeC Confidence 66677788888886644322 1111 1222233333333332 2222331 11111111 111 Q ss_pred -C--CccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHh---- Q lcl|NC_020082. 189 -P--NVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFME---- 261 (354) Q Consensus 189 -p--~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~---- 261 (354) | +....+.+..|.+.++ .++.||.+....+... +...|.+++|+++.|..|.+- ..+.+.+.- T Consensus 156 ~~~~~~~~lt~~~~W~~~~a-dp~~di~~~~~~~~~~--~g~~~~~~i~~~~~~~~l~~~-------~~v~~~~~~~~~~ 225 (346) T protein:vir:63 156 RDPALTVQLTGGAAWDQATS-DPLGNIQTMRTTAWKK--SNSTITRLTMGLDAWSLFSQK-------PAVVELLNLFYKG 225 (346) T ss_pred CCccceeeecccccCCCCCC-CHHHHHHHHHHHHHHc--cCCceEEEEECHHHHHHHhcC-------HHHHHHHhhhccc Confidence 1 1112345678987665 4789999999888764 335788999999999988531 122222211 Q ss_pred ---------------------cCceeecccccceEEeeceeeeccccccccc--cCcceEEEEEEcCc-ceEEEeeccch Q lcl|NC_020082. 262 ---------------------ANSYTLLTGNELDIQIRFQLDAAELAANGVS--NSNKPRYMVYDKSD-RNLAMANPIPF 317 (354) Q Consensus 262 ---------------------n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g--~~g~d~~v~y~~d~-~~~~~~vp~~~ 317 (354) .+.+. ....++|.....- ..+..|.. --..+.++.+.... -.+....+..+ T Consensus 226 ~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~gi~i~~y~~~---y~d~~G~~~~~ip~~~v~~~p~~~~g~~~yg~~~d~ 300 (346) T protein:vir:63 226 STSDFNRSRLDDGSPVQYQGTIGGYN--GMGTLELYTYHDT---YTGDDNTEQEILGSYDVVGTGPGLQGTQCFGAIMDF 300 (346) T ss_pred cccccchhhcccchhhhhhhhHhhhh--ccCCeEEEEeccE---EEcCCCceeccccCCeEEEEecCCcceEEEeecccc Confidence 00000 0011122111110 00000000 00011222221110 01111111000 Q ss_pred h-------cc---cccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 318 R-------ML---APQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 318 ~-------~~---~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . +. -.+..+....+...++. =..+.+|.++..+.+- T Consensus 301 ~~~~~~~~~~~~~~~~~dp~~~~~~~~s~p-lPv~~~p~~~~~~~V~ 346 (346) T protein:vir:63 301 KNGLVPTRMFPKMWEEEDPSVAMLMTQSAP-LMVPAQPNASFRMTVK 346 (346) T ss_pred ccCcccceeeeEEEEecCCCEEEEEEeeec-cceecCCCcEEEEEeC Confidence 0 00 01112223333222221 1345667777766666 No 159 >protein:vir:102823 Length: 470 # NCBI annotation: major structural protein # Family: family:all:2450 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874086;genbank:gi:118197693;genbank:GeneID:4496015 Probab=74.05 E-value=0.16 Score=24.90 Aligned_cols=293 Identities=13% Similarity=0.064 Sum_probs=125.0 Q ss_pred eeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhh--ccccchhhccccCCCCCceeeE Q lcl|NC_020082. 17 LVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPY--GDITYRSDVPMAANIPEYADTW 94 (354) Q Consensus 17 ~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~--~~l~~r~~v~v~~~~~~~~~~~ 94 (354) ..+.+-.|- ++... =|++||+.- +.+ +.+ +.+|+++...-. .+++.-.-++- .+.......+ T Consensus 1 ~~~~~~~~~--~~a~~--~al~~a~~~--------g~A-lR~--EsLd~~l~~lt~~~~~ftf~~~i~k-~~a~STV~ey 64 (470) T protein:vir:10 1 MPYEHLKHL--DEATL--KALNAAGQV--------AES-LER--EDLEPEVTQLNVLDTPLTDLLSKNA-VKAKAYEHEY 64 (470) T ss_pred CChhHhhhh--hHHHH--HHHHHhhhc--------chh-hhh--hhhccceeEeeecCccchhhhhcCC-chhhhHhhhh Confidence 222221110 11111 155554321 122 333 556666654222 22332222221 1222222222 Q ss_pred E--EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhhe Q lcl|NC_020082. 95 M--YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSV 172 (354) Q Consensus 95 ~--~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~ 172 (354) + |.....+|-+. ++ .....+..+.++.|++..+..++.....+...+...+-+=.++.....+.|-..+++..... T Consensus 65 ~~~~~rhG~~g~s~-~~-E~~l~~~~d~~~~Rr~v~~K~l~~~~~VT~~a~~~~~n~v~d~~~~~~~dai~~ia~tiE~a 142 (470) T protein:vir:10 65 NVVTARHDKIGYAA-FR-EGGLPRTVEVNVVRRRIRPMLVGHRITVTELATRTTQNGVMQIDELVKREKMIAVANEFEYL 142 (470) T ss_pred hhhcccccccccee-ec-ccccCccCCCceEEEEEEEEEEeecchhhhhhhhhhhccccchHHHHHHHHHHHHHHHHHhh Confidence 1 22233344432 33 33334456778888888999999988888777666655555888888889999999999999 Q ss_pred eeeeehhh-----------Cceeeee--cCCcc--ceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHH Q lcl|NC_020082. 173 AYFGDSSR-----------GMYGLFN--NPNVT--LSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPD 237 (354) Q Consensus 173 ~f~G~~~~-----------gi~GLlN--~p~~~--~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~ 237 (354) .||||+.+ ...||.| +++-+ +..+.+. +-+ .+.|+++-..+. .++++-.|+-+.||+. T Consensus 143 ~FyGDs~l~s~~~g~~~gleFDGl~~lId~~~~~NViDarG~-----~Ls-~~~L~~aa~~I~-~~~~fGt~TD~~lp~~ 215 (470) T protein:vir:10 143 AFYGDNLLGDDVPGSPNNLQQDGIINIIKRGAPQNVLDAGGR-----PLS-IDLLWEAESRVV-STQAFANPTAVFISYV 215 (470) T ss_pred hhhhccccccccCcccCceeccchhhhccCCCCccccccCCC-----Ccc-HHHHHHHHhhhc-ccccccChhhhccchh Confidence 99998755 2445522 21111 1111111 001 345565554443 3567889999999999 Q ss_pred HHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc----Cc-----ce Q lcl|NC_020082. 238 LWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK----SD-----RN 308 (354) Q Consensus 238 ~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~----d~-----~~ 308 (354) ....|....++..- .+..+|......|.+ ++.+.++.++.. -++..+.+. +| ++ T Consensus 216 vka~f~~~~~~~qR------v~~~~N~~~~~~G~~-----v~~f~sa~G~I~------L~~s~~m~~~~k~~p~~l~~~v 278 (470) T protein:vir:10 216 DKLNLQASFYQISR------VMTTADRRAGLLGAD-----AQSYIGVRGEHS------LYPSQFLGDFHKFNPARFGAEV 278 (470) T ss_pred HHHHHHHhhcCceE------EEEecCCCceeeeee-----ccceeeeeeeee------ecccccccchhhcCcccCCccc Confidence 99998765332211 011111111111111 111111111000 000111110 00 10 Q ss_pred EEEeec---------cchhcccccccCc--------eeEEeeeeeeeeEEEECccee-eeeecC Q lcl|NC_020082. 309 LAMANP---------IPFRMLAPQMASL--------GITVPAEYKISGTEFRYPLCA-AYVDMA 354 (354) Q Consensus 309 ~~~~vp---------~~~~~~~~~~~~~--------~~~~~~~~~~gGv~i~~P~ai-~y~D~~ 354 (354) -.+.-| .+...++.+.+.. +|..+...+.|-- +|..+ ++.|.. T Consensus 279 ~~~aAP~~~~tv~~t~~~~a~~~~sk~g~~~~~~v~sy~y~v~~~~gds---~s~~v~vt~t~~ 339 (470) T protein:vir:10 279 GDFAAPSNSWTVSTTDNFVTLPYNSGLGDPANTTVYSYAFKAANFYGES---AAKYIDVYIDST 339 (470) T ss_pred CCcccCceeEEeecCCCceeecccCCCCcccCcceeEEEEEEEEecCCC---CcceEEEEEeee Confidence 001111 1122222222211 1222222111111 12122 122222 No 160 >protein:vir:3364 Length: 347 # NCBI annotation: major capsid protein 10A # Family: family:all:975 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523335;genbank:gi:17570826;genbank:GeneID:927448 Probab=73.74 E-value=0.17 Score=24.85 Aligned_cols=293 Identities=11% Similarity=0.038 Sum_probs=124.0 Q ss_pred hh-hhhhc-------CCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeecccCcee Q lcl|NC_020082. 35 TA-LDAIG-------NPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGVTMGK 106 (354) Q Consensus 35 ~a-mda~~-------~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~G~a~ 106 (354) || +...+ .++...|+ -..|+....-.|+.... ..-..+.++.+.+ .- +..++.+... |..+ T Consensus 1 ~~~~~~~~~~~t~~g~~~~~~~~--~al~ie~~~g~V~~~f~----~~s~~~~~v~~r~-~~-~G~sv~i~~i---G~~t 69 (347) T protein:vir:33 1 MANIQGGQQIGTNQGKGQSAADK--LALFLKVFGGEVLTAFA----RTSVTMPRHMLRS-IA-SGKSAQFPVI---GRTK 69 (347) T ss_pred CCCCccCcccccccccCCcccch--HHHHHHHHHHHHHHHHH----HHHhhhhhhcccc-cc-ccceeEeeec---ccee Confidence 11 11000 01111111 12355333334444332 2234444444432 11 2344544443 3333 Q ss_pred E--ecCCCCccce--eeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheee-----eee Q lcl|NC_020082. 107 F--IGANGQDLPR--VAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAY-----FGD 177 (354) Q Consensus 107 ~--~~~~~~dip~--v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f-----~G~ 177 (354) + +.. +.+++. .+....+....+=.+- -+..-+.+++.++ +..++-.+-.+.+..++++..|+.++ .+. T Consensus 70 ~~~~~~-g~~l~~~~~~~~~~e~~ltiD~~~-y~~~~VddiD~~q-~~~D~~~~~~~~~g~aLA~~~D~~i~~~l~~~~~ 146 (347) T protein:vir:33 70 AAYLKP-GENLDDKRKDIKHTEKVIHIDGLL-TADVLIYDIEDAM-NHYDVRAEYTAQLGESLAMAADGAVLAELAGLVN 146 (347) T ss_pred eeeecC-CCCCCCCCCCCccceEEEEechhh-hhhHHHhhHHHHh-cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh Confidence 2 222 122221 1122222223222211 1123346777775 46677778888999999999999886 222 Q ss_pred h---hhCceeeeecCCccc---eecccccc-ccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhccCCC Q lcl|NC_020082. 178 S---SRGMYGLFNNPNVTL---SSATKDYK-TMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQLMTG 249 (354) Q Consensus 178 ~---~~gi~GLlN~p~~~~---~~~~~~w~-~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~~~~~ 249 (354) . .....+.+..+.... .+.++.|. .++++.|++.|.++..+|.++ .+. ....++|+|+.|..|..-..-. T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~tg~~~d~~~~a~~i~~~i~~a~~~Lde~--~VP~~gR~~vv~P~~y~~Ll~~~~~~ 224 (347) T protein:vir:33 147 LPDGSNENIEGLGKPTVLTLVKPTTGSLTDPVELGKAIIAQLTIARASLTKN--YVPAADRTFYTTPDNYSAILAALMPN 224 (347) T ss_pred hhcccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHHHhhc--CCCccCcEEEeCHHHHHHHhcccccc Confidence 1 111222222222111 11222332 246788999999999998875 332 2367999999999987532100 Q ss_pred CCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccc----------------cCcceEEEEE--------EcC Q lcl|NC_020082. 250 YTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS----------------NSNKPRYMVY--------DKS 305 (354) Q Consensus 250 ~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g----------------~~g~d~~v~y--------~~d 305 (354) -.+|.-.. . ...|.-..+-..+++++..+...... .....+..++ .++ T Consensus 225 -----~~d~~~~~-~--~~~G~V~~i~G~~V~~Sn~lp~~~~~~~~~~~~ag~~~~~~~~~~~~~~~a~~~~~gl~~h~~ 296 (347) T protein:vir:33 225 -----AANYQALL-D--PERGTIRNVMGFEVVEVPHLTAGGAGDTREDAPADQKHAFPATSSTTVKVALDNVVGLFQHRS 296 (347) T ss_pred -----cccccccc-c--cccceeEEEeceeEEEecccccCccccccccccccccccccCCcccceeccccceeeeeecch Confidence 01111000 0 11233334444444444433221110 0001111111 111 Q ss_pred -cceEEEeeccchhcccccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 306 -DRNLAMANPIPFRMLAPQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 306 -~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ...+++-- ..++....+ +.....+...... |+-+.||.+++-.-.- T Consensus 297 A~g~v~~~~-~~~e~~r~~-~~~~d~i~~~~~~-G~~vlrP~~av~i~~~ 343 (347) T protein:vir:33 297 AVGTVKLKD-LALERARRA-NYQADQIIAKYAM-GHGGLRPEAAGAIVLP 343 (347) T ss_pred hheeeeeec-eeeeeccch-hhhhHhhhhhhhc-CCceecccceEEEecC Confidence 11111100 111111111 2223444444544 8999999998876444 No 161 >protein:vir:97031 Length: 402 # NCBI annotation: 31 # Family: family:all:2806 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654132;genbank:gi:108862016;genbank:GeneID:5075980 Probab=72.69 E-value=0.18 Score=24.67 Aligned_cols=295 Identities=8% Similarity=0.020 Sum_probs=125.7 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.+ ....|+-.-.++..-.|+....-.++...-+ .=..+.++.+.+ +- +..|+.+... T Consensus 1 Ms~~n-----------~~t~~~~~~s~~~~al~le~f~geV~taF~~----~si~~~~~~vrt-i~-~GkS~qf~~i--- 60 (402) T protein:vir:97 1 MSTPN-----------TLTNVAVSASGEVDSLLIEKFNGKVNEQYLK----GENILSYFDVQT-VT-GTNTVSNKYL--- 60 (402) T ss_pred CCCcc-----------cccccccccccchhhhhhhhhhhhHHHHHHH----HHhhcCcceeee-ec-ccceEEEEEE--- Confidence 22211 0001111111122234655444455554422 222223333322 22 3344544443 Q ss_pred CceeE--ecCCCCccceeeeccceeEE--EEEEEEeeeeecHHHHHHHHHhCCC-cchHHHHHHHHHHHHHhhheeee-- Q lcl|NC_020082. 103 TMGKF--IGANGQDLPRVAQSAQMHTV--PLGYAGNECHYTLDEMRKSAAMNMP-IDAEQARLAFRGAEEHSQSVAYF-- 175 (354) Q Consensus 103 G~a~~--~~~~~~dip~v~~~~~~~~~--pv~~~~~~~~~~~~El~~a~~~g~~-ld~~k~~aA~~~~~~~~n~~~f~-- 175 (354) |..+. +.. +..+-.....-++..+ -=..+...| +.+++.++ ...+ +..+-.+.+..++++..|+.++- T Consensus 61 G~~~a~y~~~-G~~ldg~~~~~~k~~ItID~lL~a~~~---V~diDeaq-~~yD~vRse~s~e~G~ALA~~~Dq~ii~~i 135 (402) T protein:vir:97 61 GETELQVLAP-GQSPNATPTQADKNQLVIDTTVIARNT---VAHIHDVQ-GDIDSLKPKLAMNQAKQLKRLEDQMAIQQM 135 (402) T ss_pred eeeEEeeecc-ccccCCCCcccccEEEEeCceeechhh---hhhHHHHH-hcccchhHHHHHHHHHHHHHHHHHHHHHHH Confidence 44332 111 1111111111112111 111222222 34555554 4555 56667788889999999996642 Q ss_pred ---eehhh----Cceeeeec-CCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccC Q lcl|NC_020082. 176 ---GDSSR----GMYGLFNN-PNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLM 247 (354) Q Consensus 176 ---G~~~~----gi~GLlN~-p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~ 247 (354) |.... +..+...+ .+.+.. .+..=...+++.+.+-|.++..+|.++.-=..+ ..++|+|..|..|..- T Consensus 136 ~~aa~a~t~~~~~~~~~~~~g~s~~~~-~t~~~a~~~~~~l~~ai~~a~~~LdEkdVP~~d-Rv~vv~P~~y~~Ll~~-- 211 (402) T protein:vir:97 136 LLGGIANTKAERNKPRVKGHGFSINVN-VTESEALANPQYVMAAVEYALEQQLEQEVDISD-VAIMMPWKFFNALRDA-- 211 (402) T ss_pred HHhhccccccccccCcccccccccccc-cccchhhcCHHHHHHHHHHHHHHHHhcCCCccc-cEEEeChHHHHHHhhc-- Confidence 21111 11122211 111111 111112346888999999998888764111122 5899999999988742 Q ss_pred CCCCCchHHHHHHhc-CceeecccccceEEeeceeeeccccc------------ccc-------ccCcceEEEEEEcCcc Q lcl|NC_020082. 248 TGYTDRTVMQHFMEA-NSYTLLTGNELDIQIRFQLDAAELAA------------NGV-------SNSNKPRYMVYDKSDR 307 (354) Q Consensus 248 ~~~~~~Tvl~~l~~n-~~~~~~~g~~l~I~~~~~L~~~~~~~------------~g~-------g~~g~d~~v~y~~d~~ 307 (354) +.-.+. +|...+ +.+ ..|.-+.+-.++.+++..+-. .+. +.-.+-++++|.+ + T Consensus 212 ~rl~n~---d~~~~~~g~~--~~G~v~~v~Gv~Vv~SnnlP~~a~~it~~~ls~a~~G~~y~~t~d~t~~~~~~f~~--~ 284 (402) T protein:vir:97 212 DRIVDK---TYTISQSGAT--INGFVLSSYNCPVIPSNRFPTFAQDQAHHLLSNEDNGYRYDPIAEMNGAVAVLFTS--D 284 (402) T ss_pred ccccch---hhccccCCcc--ccceeEEEeceEEEecCccccccccccccccccCCCCccCCcCcccceeEEEEEec--c Confidence 000111 222111 111 123333444444444333311 000 1112335666654 3 Q ss_pred eEEEeeccchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 308 NLAMANPIPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 308 ~~~~~vp~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) -+.-.-.++++.-- -+.+...|.+.+.... |+..+||.+++-+-+- T Consensus 285 Av~tvk~~~vT~~~~~d~r~~~~~id~~~a~-G~g~~RPeaa~vv~~~ 331 (402) T protein:vir:97 285 ALLVGRTIEVTGDIFYEKKEKTYYIDTFMAE-GAIPDRWEAVSVVTTK 331 (402) T ss_pred eEEEEEeeccccchhhchhHHHHHHHHHHHh-CCcccCccceEEEEEe Confidence 22222223333321 2445556666666655 6999999988777221 No 162 >protein:vir:7990 Length: 273 # NCBI annotation: gp6 # Family: family:all:2203 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817344;genbank:gi:29565772;genbank:GeneID:1258978 Probab=68.12 E-value=0.24 Score=23.96 Aligned_cols=265 Identities=9% Similarity=0.058 Sum_probs=120.5 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCC-CCceeeEEEeeecccCceeEecCCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANI-PEYADTWMYRSYDGVTMGKFIGANGQ 113 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~-~~~~~~~~~~~~~~~G~a~~~~~~~~ 113 (354) || +. .|.. +.+...+.+.....+....++....+. +--..++.++.....+.+..... +. T Consensus 1 MA-----~~----------~~~p---ei~~~~v~~~~~~~lv~~~l~~~~~~~~~~~GdTv~ip~~~~~~~~d~~~~-~~ 61 (273) T protein:vir:79 1 MA-----FN----------NFIP---ELWSDMLLEEWTAQTVFANLVNREYEGIASKGNVVHIAGVVAPTVKDYKAA-GR 61 (273) T ss_pred Cc-----ch----------hhhH---HHHHHHHHHHHHhhccchhhhhccccccccCCcEEEEeecCcccccccccC-CC Confidence 10 10 1222 234455555556666666555332221 11123677777654443332211 12 Q ss_pred ccceeeeccceeEEEEEE-EEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCCcc Q lcl|NC_020082. 114 DLPRVAQSAQMHTVPLGY-AGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVT 192 (354) Q Consensus 114 dip~v~~~~~~~~~pv~~-~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~ 192 (354) .++.-+.+.+.....+-. ...++.++ +++..+ ...++. +-.+.+..++++..|+.++- ++..-+.. T Consensus 62 ~~~~~~~~~~~~~~tid~~~~~~~~i~--d~d~~~-~~~~~~-~~~~~~~~ala~~vD~~i~~---------~~~~a~~~ 128 (273) T protein:vir:79 62 QTSADAISDTGVDLLIDQEKSIDFLVD--DIDRVQ-VAGSLE-AYTRAGATALATDTDKFIAD---------MLVDNGTA 128 (273) T ss_pred ccCccccccceEEEEEeeecccceeec--cHHHHh-hcccHH-HHHHHHHHHHHHHHHHHHHH---------HHhhcccc Confidence 233333444455555544 34556665 444443 344665 45566777888888775431 11000000 Q ss_pred ceeccccccccCHHHHHHHHHHHHHHHHHHhCCcc-cccEEEeCHHHHHHHhhc--cCCCCCCchHHHHHHhcCceeecc Q lcl|NC_020082. 193 LSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFH-VPNTALMFPDLWNQANNQ--LMTGYTDRTVMQHFMEANSYTLLT 269 (354) Q Consensus 193 ~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~-~p~~L~l~p~~~~~L~~~--~~~~~~~~Tvl~~l~~n~~~~~~~ 269 (354) .+ .+. .-++..+++.|.++..+|-+. ++. ....|+++|..|..|.+. .... .++.-.++. -.+ T Consensus 129 -~~-~~~--~~~~~~~~~~i~~a~~~ld~~--~vP~~~R~lvv~p~~~~~Ll~~~~~~~~------~~~~~~~~~--l~~ 194 (273) T protein:vir:79 129 -LT-GSA--PSDADDAFDLIASALKELTKA--NVPNVGRVVVVNAEMAFWLRSSGSKLTS------ADTSGDAAG--LRA 194 (273) T ss_pred -cc-ccc--ccchhhHHHHHHHHHHHhhhc--cCCccCcEEEECHHHHHHHhhchhhhhh------hhhcccccc--eee Confidence 00 011 123566788888888777553 331 235899999999988642 1111 011101111 112 Q ss_pred cccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeec-cchhcccccccCceeEEeeeeeeeeEEEECccee Q lcl|NC_020082. 270 GNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANP-IPFRMLAPQMASLGITVPAEYKISGTEFRYPLCA 348 (354) Q Consensus 270 g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp-~~~~~~~~~~~~~~~~~~~~~~~gGv~i~~P~ai 348 (354) |..-.+....+.++..+... .+ ...+++.++. +.+..- ..+..+.. ++...-.+..... .|+.+.+|.++ T Consensus 195 G~ig~~~G~~i~~s~~lp~~----~~-~~~~a~~~~A--~~~a~~~~~~e~~r~-~~~~~~~v~~~~~-yg~~v~~p~~v 265 (273) T protein:vir:79 195 GTIGNLLGARIVESNNLRDT----DD-EQFVAFHPSA--AAYVSQIDTVEALRD-QDSFSDRIRALHV-YGGKVVRPTGV 265 (273) T ss_pred eEeeEEeceEEEeccccccc----Cc-eEEEEEeccc--eeeeeehhhhhcccC-cccceeeeeeeee-eeeEEecCceE Confidence 33334444455544333211 11 1234443332 111100 01111111 2223434444443 57888999999 Q ss_pred eeeecC Q lcl|NC_020082. 349 AYVDMA 354 (354) Q Consensus 349 ~y~D~~ 354 (354) +-+--+ T Consensus 266 v~~~~~ 271 (273) T protein:vir:79 266 VVFNKT 271 (273) T ss_pred EEEecc Confidence 998877 No 163 >protein:vir:95603 Length: 463 # NCBI annotation: ORF016 # Family: family:all:2450 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240903;genbank:gi:66394965;genbank:GeneID:5132544 Probab=67.36 E-value=0.25 Score=23.85 Aligned_cols=284 Identities=14% Similarity=0.117 Sum_probs=118.3 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccch-hh-hhHHHHHHHHHHHHHHHHhhh--cccc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDA-DG-GIAFYISQLAGIEATVYETPY--GDIT 76 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA-~~-~~~fl~~~L~~id~~v~e~~~--~~l~ 76 (354) |--|.-|+|.-- .+...+.+ |.+...+.-+++. +- ++++-. +.+|+.+....+ .+++ T Consensus 3 ~~~~~~~~~~~~----------~~~~~e~~------~KS~~tg~g~~p~~q~~~~AlR~---EsL~~~i~~Lt~~~~~f~ 63 (463) T protein:vir:95 3 IEKNLSDVQQKY----------ADQFQEDV------VKSFQTGYGITPDTQIDAGALRR---EILDDQITMLTWTNEDLI 63 (463) T ss_pred cccccchHHHHH----------HhhhhHHH------HHHhhcCCccCCccccCcchhhh---hhhhhhhheeeecccchh Confidence 222333333211 11111111 2222222212222 22 334443 445666654322 2333 Q ss_pred chhhccccCCCCCceeeEE-EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcch Q lcl|NC_020082. 77 YRSDVPMAANIPEYADTWM-YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDA 155 (354) Q Consensus 77 ~r~~v~v~~~~~~~~~~~~-~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~ 155 (354) .-..++-. +.......++ +.....+|.+..++... ..+..+.++.|++..+..+......+...-. +-...+... T Consensus 64 ~~~~i~k~-~a~STV~~y~~~~~~G~~g~~~f~~E~g-~~~~~d~~~~Rr~~~~K~l~~~~~VS~~~~l--~n~~~d~~~ 139 (463) T protein:vir:95 64 FYRDISRR-PAQSTVVKYDQYLRHGNVGHSRFVKEIG-VAPVSDPNIRQKTVSMKYVSDTKNMSIASGL--VNNIADPSQ 139 (463) T ss_pred hhhhcCCc-hhhhhhhhheeeeccCcccccccccccc-ccccCCCceEEEEEEeeeeehhhhhhhHHHh--hcccccHHH Confidence 33333321 2222222222 22344556666655543 3456677888888888887776666554333 444557778 Q ss_pred HHHHHHHHHHHHHhhheeeeeehhhC---------ceeeee--cCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 156 EQARLAFRGAEEHSQSVAYFGDSSRG---------MYGLFN--NPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 156 ~k~~aA~~~~~~~~n~~~f~G~~~~g---------i~GLlN--~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) ...+.|...+++......||||+.+. ..||.| +|.- +..+.+.- ..+ +.|+++-..+ +. T Consensus 140 ~~~~dai~~ia~tiE~a~FyGds~l~~~~~~~gleFDGl~~lId~en-viDarG~~----Ls~--~~ln~Aa~~i---~~ 209 (463) T protein:vir:95 140 ILTEDAIAVVAKTIEWASFYGDASLTSEVEGEGLEFDGLAKLIDKNN-VINAKGNQ----LTE--KHLNEAAVRI---GK 209 (463) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcCccccchhhhhhhcCCCC-eeecCCCc----ccH--HHHhhhhhhh---hc Confidence 88889999999999999999997654 334422 1211 11222111 111 3355544333 34 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK 304 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~ 304 (354) ++-.|+-+.||+.....|....++...- +...|......|.+ ++. |-. T Consensus 210 ~fGt~TD~~lp~~vka~f~~~~l~~qrv------~~~~N~~~~~~G~~-----v~~---------------------f~s 257 (463) T protein:vir:95 210 GFGTATDAYMPIGVHADFVNSILGRQMQ------LMQDNSGNVNTGYS-----VNG---------------------FYS 257 (463) T ss_pred ccCChhheecchHHHHHHHHHhcCceEE------EEcCCCCceeeeee-----ccc---------------------eee Confidence 7788999999999999997543322110 01111110001110 000 001 Q ss_pred CcceEEEeeccchhcccccccCceeE--------EeeeeeeeeEEEECcceee-eeecC Q lcl|NC_020082. 305 SDRNLAMANPIPFRMLAPQMASLGIT--------VPAEYKISGTEFRYPLCAA-YVDMA 354 (354) Q Consensus 305 d~~~~~~~vp~~~~~~~~~~~~~~~~--------~~~~~~~gGv~i~~P~ai~-y~D~~ 354 (354) ..-.++++--.-+. .+..+.-. +|..- ++-|.=..-.+.- --|.+ T Consensus 258 ~~G~I~L~~s~~m~----~~~il~~~~~~~p~ap~~~~~-tatv~~~~~~~~~~~~~~a 311 (463) T protein:vir:95 258 SRGFIKLHGSTVME----NELILDESLQPLPNAPQPAKV-TATVETKQKGAFENEEDRA 311 (463) T ss_pred eeeeeeeCCceecC----CcccccchhhcCCCCccCcee-EEEEeeccCCCCCCccccc Confidence 11122222100000 00111100 00000 0000000000000 01111 No 164 >protein:vir:99311 Length: 463 # NCBI annotation: putative capsid protein # Family: family:all:2450 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024474;genbank:gi:48696433;genbank:GeneID:2948039 Probab=67.36 E-value=0.25 Score=23.85 Aligned_cols=284 Identities=14% Similarity=0.117 Sum_probs=118.3 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccch-hh-hhHHHHHHHHHHHHHHHHhhh--cccc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDA-DG-GIAFYISQLAGIEATVYETPY--GDIT 76 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA-~~-~~~fl~~~L~~id~~v~e~~~--~~l~ 76 (354) |--|.-|+|.-- .+...+.+ |.+...+.-+++. +- ++++-. +.+|+.+....+ .+++ T Consensus 3 ~~~~~~~~~~~~----------~~~~~e~~------~KS~~tg~g~~p~~q~~~~AlR~---EsL~~~i~~Lt~~~~~f~ 63 (463) T protein:vir:99 3 IEKNLSDVQQKY----------ADQFQEDV------VKSFQTGYGITPDTQIDAGALRR---EILDDQITMLTWTNEDLI 63 (463) T ss_pred cccccchHHHHH----------HhhhhHHH------HHHhhcCCccCCccccCcchhhh---hhhhhhhheeeecccchh Confidence 222333333211 11111111 2222222212222 22 334443 445666654322 2333 Q ss_pred chhhccccCCCCCceeeEE-EeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcch Q lcl|NC_020082. 77 YRSDVPMAANIPEYADTWM-YRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDA 155 (354) Q Consensus 77 ~r~~v~v~~~~~~~~~~~~-~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~ 155 (354) .-..++-. +.......++ +.....+|.+..++... ..+..+.++.|++..+..+......+...-. +-...+... T Consensus 64 ~~~~i~k~-~a~STV~~y~~~~~~G~~g~~~f~~E~g-~~~~~d~~~~Rr~~~~K~l~~~~~VS~~~~l--~n~~~d~~~ 139 (463) T protein:vir:99 64 FYRDISRR-PAQSTVVKYDQYLRHGNVGHSRFVKEIG-VAPVSDPNIRQKTVSMKYVSDTKNMSIASGL--VNNIADPSQ 139 (463) T ss_pred hhhhcCCc-hhhhhhhhheeeeccCcccccccccccc-ccccCCCceEEEEEEeeeeehhhhhhhHHHh--hcccccHHH Confidence 33333321 2222222222 22344556666655543 3456677888888888887776666554333 444557778 Q ss_pred HHHHHHHHHHHHHhhheeeeeehhhC---------ceeeee--cCCccceeccccccccCHHHHHHHHHHHHHHHHHHhC Q lcl|NC_020082. 156 EQARLAFRGAEEHSQSVAYFGDSSRG---------MYGLFN--NPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSR 224 (354) Q Consensus 156 ~k~~aA~~~~~~~~n~~~f~G~~~~g---------i~GLlN--~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~ 224 (354) ...+.|...+++......||||+.+. ..||.| +|.- +..+.+.- ..+ +.|+++-..+ +. T Consensus 140 ~~~~dai~~ia~tiE~a~FyGds~l~~~~~~~gleFDGl~~lId~en-viDarG~~----Ls~--~~ln~Aa~~i---~~ 209 (463) T protein:vir:99 140 ILTEDAIAVVAKTIEWASFYGDASLTSEVEGEGLEFDGLAKLIDKNN-VINAKGNQ----LTE--KHLNEAAVRI---GK 209 (463) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcCccccchhhhhhhcCCCC-eeecCCCc----ccH--HHHhhhhhhh---hc Confidence 88889999999999999999997654 334422 1211 11222111 111 3355544333 34 Q ss_pred CcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEc Q lcl|NC_020082. 225 RFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDK 304 (354) Q Consensus 225 g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~ 304 (354) ++-.|+-+.||+.....|....++...- +...|......|.+ ++. |-. T Consensus 210 ~fGt~TD~~lp~~vka~f~~~~l~~qrv------~~~~N~~~~~~G~~-----v~~---------------------f~s 257 (463) T protein:vir:99 210 GFGTATDAYMPIGVHADFVNSILGRQMQ------LMQDNSGNVNTGYS-----VNG---------------------FYS 257 (463) T ss_pred ccCChhheecchHHHHHHHHHhcCceEE------EEcCCCCceeeeee-----ccc---------------------eee Confidence 7788999999999999997543322110 01111110001110 000 001 Q ss_pred CcceEEEeeccchhcccccccCceeE--------EeeeeeeeeEEEECcceee-eeecC Q lcl|NC_020082. 305 SDRNLAMANPIPFRMLAPQMASLGIT--------VPAEYKISGTEFRYPLCAA-YVDMA 354 (354) Q Consensus 305 d~~~~~~~vp~~~~~~~~~~~~~~~~--------~~~~~~~gGv~i~~P~ai~-y~D~~ 354 (354) ..-.++++--.-+. .+..+.-. +|..- ++-|.=..-.+.- --|.+ T Consensus 258 ~~G~I~L~~s~~m~----~~~il~~~~~~~p~ap~~~~~-tatv~~~~~~~~~~~~~~a 311 (463) T protein:vir:99 258 SRGFIKLHGSTVME----NELILDESLQPLPNAPQPAKV-TATVETKQKGAFENEEDRA 311 (463) T ss_pred eeeeeeeCCceecC----CcccccchhhcCCCCccCcee-EEEEeeccCCCCCCccccc Confidence 11122222100000 00111100 00000 0000000000000 01111 No 165 >protein:vir:94800 Length: 319 # NCBI annotation: ORF012 # Family: family:all:701 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240536;genbank:gi:66396203;genbank:GeneID:5133580 Probab=65.53 E-value=0.28 Score=23.60 Aligned_cols=288 Identities=8% Similarity=-0.044 Sum_probs=121.1 Q ss_pred cccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHH-HHHHHHHHHHHhh-hccccchh Q lcl|NC_020082. 2 AIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYIS-QLAGIEATVYETP-YGDITYRS 79 (354) Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~-~L~~id~~v~e~~-~~~l~~r~ 79 (354) --|+ |++--|..--.-.|.++..... + -.-|++ ....||....... ..++..-+ T Consensus 1 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----------------n--t~~l~~k~~~~LD~~~~~~~~s~~~~~N~ 56 (319) T protein:vir:94 1 MNKT-----IKNATGMLKLNLQHFANKSVEP-----------------G--QTLLKNKHVGILERVTAVNAYSTPALISN 56 (319) T ss_pred CCcc-----cccccceeEeehhhhhccCCCc-----------------c--hHHHHHHHHHHHHHHHHHhhhhhhcccCc Confidence 0011 1111111000001111111111 1 111111 1122333222211 11121111 Q ss_pred hccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhC-CCcchHHH Q lcl|NC_020082. 80 DVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMN-MPIDAEQA 158 (354) Q Consensus 80 ~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g-~~ld~~k~ 158 (354) -+ -+.+..++.....+..|-. .|.- ..+...-+++..+....+-. ..+|.+.+.+++..+..+ ........ T Consensus 57 ~~-----e~~gg~tVkIp~i~~~gl~-DY~R-~~g~~~g~vt~~~~t~tidq-dR~~~F~VD~~D~~Etn~~l~a~~i~~ 128 (319) T protein:vir:94 57 DA-----IFMEGRSFTVMKGDTTELK-DYKR-NATNEFDHPKIEETTYFLDQ-EKYWGRFVDALDRKDTEGNIDINYVVA 128 (319) T ss_pred ce-----EeccCcEEEEeeecccccc-cccC-CCCcccCCcccceeEEEeec-ccccccccchhhHhhhhchhhHHHHHH Confidence 11 1235667888877766643 2211 12222234455566655544 677788888888776532 22222334 Q ss_pred HHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHH Q lcl|NC_020082. 159 RLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDL 238 (354) Q Consensus 159 ~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~ 238 (354) +.++..+.-..|...|--...... ... . .+.|++.+++.|.++..+|.+. ++.....|+|+|.. T Consensus 129 ~~~~~~v~PEiDay~~skla~~a~---------~~~--~---~~~t~~n~y~~i~~a~~~Lde~--~VP~~Rvl~Vtp~~ 192 (319) T protein:vir:94 129 RQGAEVVAPYLDNLRFATLARNKA---------KHL--T---VGTGSDAQYDAVLDVSVELDEI--KAPENRVLFVSPTF 192 (319) T ss_pred HHHHHHhhhhhhHHHHHHHHhhcc---------ccc--c---cccCHHHHHHHHHHHHHHHHhc--CCCCCcEEEeCHHH Confidence 455555655566554433322110 000 1 1245778999999999999875 55556789999999 Q ss_pred HHHHhhc-cCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccch Q lcl|NC_020082. 239 WNQANNQ-LMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPF 317 (354) Q Consensus 239 ~~~L~~~-~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~ 317 (354) |..|..- +.....+ +.+-...++... .|..++.++...... -+.+.+++...-.-..... ..+ T Consensus 193 ~~~L~~~~~f~~~~~--~~~~~~~~g~Vg-------~idG~~Vi~vps~~~-----k~in~i~~h~~A~~~~~k~--~~~ 256 (319) T protein:vir:94 193 YKGIKKFVIALPQGD--TRQQVLGKGVQG-------ELDGFVIVKVPTKLL-----QGLQAIAVVGEVLASPIQA--DLA 256 (319) T ss_pred HHHHHhhhhhhcccc--ccccceeeeece-------eecCeEEEEeccccc-----ccceEEEEcCCeeeeeeee--eee Confidence 9999542 1111111 111111122111 222222222211111 1233333332111111110 112 Q ss_pred hcccccccCceeEEeeeeeeeeEEEECcce-eeeeecC Q lcl|NC_020082. 318 RMLAPQMASLGITVPAEYKISGTEFRYPLC-AAYVDMA 354 (354) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~gGv~i~~P~a-i~y~D~~ 354 (354) +.+.+.++...|.+.+ -.+.|+.|.+|.. .+|+... T Consensus 257 ~~~~p~~~~~a~~v~g-r~y~d~~V~~~k~~~Iy~~~~ 293 (319) T protein:vir:94 257 KTNSNIPGMFGTLAEQ-LLYTGAFVPEHLQKYIFTIGG 293 (319) T ss_pred eccCCCccccceeeee-eeeeeeEEeccccceEEEeec Confidence 2222223334576665 4477899999883 2355333 No 166 >protein:vir:97331 Length: 319 # NCBI annotation: ORF011 # Family: family:all:701 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240611;genbank:gi:66396278;genbank:GeneID:5133687 Probab=65.53 E-value=0.28 Score=23.60 Aligned_cols=288 Identities=8% Similarity=-0.044 Sum_probs=121.1 Q ss_pred cccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHH-HHHHHHHHHHHhh-hccccchh Q lcl|NC_020082. 2 AIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYIS-QLAGIEATVYETP-YGDITYRS 79 (354) Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~-~L~~id~~v~e~~-~~~l~~r~ 79 (354) --|+ |++--|..--.-.|.++..... + -.-|++ ....||....... ..++..-+ T Consensus 1 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----------------n--t~~l~~k~~~~LD~~~~~~~~s~~~~~N~ 56 (319) T protein:vir:97 1 MNKT-----IKNATGMLKLNLQHFANKSVEP-----------------G--QTLLKNKHVGILERVTAVNAYSTPALISN 56 (319) T ss_pred CCcc-----cccccceeEeehhhhhccCCCc-----------------c--hHHHHHHHHHHHHHHHHHhhhhhhcccCc Confidence 0011 1111111000001111111111 1 111111 1122333222211 11121111 Q ss_pred hccccCCCCCceeeEEEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhC-CCcchHHH Q lcl|NC_020082. 80 DVPMAANIPEYADTWMYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMN-MPIDAEQA 158 (354) Q Consensus 80 ~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g-~~ld~~k~ 158 (354) -+ -+.+..++.....+..|-. .|.- ..+...-+++..+....+-. ..+|.+.+.+++..+..+ ........ T Consensus 57 ~~-----e~~gg~tVkIp~i~~~gl~-DY~R-~~g~~~g~vt~~~~t~tidq-dR~~~F~VD~~D~~Etn~~l~a~~i~~ 128 (319) T protein:vir:97 57 DA-----IFMEGRSFTVMKGDTTELK-DYKR-NATNEFDHPKIEETTYFLDQ-EKYWGRFVDALDRKDTEGNIDINYVVA 128 (319) T ss_pred ce-----EeccCcEEEEeeecccccc-cccC-CCCcccCCcccceeEEEeec-ccccccccchhhHhhhhchhhHHHHHH Confidence 11 1235667888877766643 2211 12222234455566655544 677788888888776532 22222334 Q ss_pred HHHHHHHHHHhhheeeeeehhhCceeeeecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHH Q lcl|NC_020082. 159 RLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDL 238 (354) Q Consensus 159 ~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~ 238 (354) +.++..+.-..|...|--...... ... . .+.|++.+++.|.++..+|.+. ++.....|+|+|.. T Consensus 129 ~~~~~~v~PEiDay~~skla~~a~---------~~~--~---~~~t~~n~y~~i~~a~~~Lde~--~VP~~Rvl~Vtp~~ 192 (319) T protein:vir:97 129 RQGAEVVAPYLDNLRFATLARNKA---------KHL--T---VGTGSDAQYDAVLDVSVELDEI--KAPENRVLFVSPTF 192 (319) T ss_pred HHHHHHhhhhhhHHHHHHHHhhcc---------ccc--c---cccCHHHHHHHHHHHHHHHHhc--CCCCCcEEEeCHHH Confidence 455555655566554433322110 000 1 1245778999999999999875 55556789999999 Q ss_pred HHHHhhc-cCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccch Q lcl|NC_020082. 239 WNQANNQ-LMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPF 317 (354) Q Consensus 239 ~~~L~~~-~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~ 317 (354) |..|..- +.....+ +.+-...++... .|..++.++...... -+.+.+++...-.-..... ..+ T Consensus 193 ~~~L~~~~~f~~~~~--~~~~~~~~g~Vg-------~idG~~Vi~vps~~~-----k~in~i~~h~~A~~~~~k~--~~~ 256 (319) T protein:vir:97 193 YKGIKKFVIALPQGD--TRQQVLGKGVQG-------ELDGFVIVKVPTKLL-----QGLQAIAVVGEVLASPIQA--DLA 256 (319) T ss_pred HHHHHhhhhhhcccc--ccccceeeeece-------eecCeEEEEeccccc-----ccceEEEEcCCeeeeeeee--eee Confidence 9999542 1111111 111111122111 222222222211111 1233333332111111110 112 Q ss_pred hcccccccCceeEEeeeeeeeeEEEECcce-eeeeecC Q lcl|NC_020082. 318 RMLAPQMASLGITVPAEYKISGTEFRYPLC-AAYVDMA 354 (354) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~gGv~i~~P~a-i~y~D~~ 354 (354) +.+.+.++...|.+.+ -.+.|+.|.+|.. .+|+... T Consensus 257 ~~~~p~~~~~a~~v~g-r~y~d~~V~~~k~~~Iy~~~~ 293 (319) T protein:vir:97 257 KTNSNIPGMFGTLAEQ-LLYTGAFVPEHLQKYIFTIGG 293 (319) T ss_pred eccCCCccccceeeee-eeeeeeEEeccccceEEEeec Confidence 2222223334576665 4477899999883 2355333 No 167 >protein:vir:98480 Length: 348 # NCBI annotation: ORFp38 # Family: family:all:1083 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958280;genbank:gi:41057254;uniprot:Q38595;genbank:GeneID:2732864 Probab=62.69 E-value=0.33 Score=23.22 Aligned_cols=277 Identities=10% Similarity=-0.002 Sum_probs=111.7 Q ss_pred hhhhcCCccccchhhhhHHHHHHHHHHHHHHH-HhhhccccchhhccccCCCCCceeeEEEeeeccc-Cc---eeEecCC Q lcl|NC_020082. 37 LDAIGNPNVMLDADGGIAFYISQLAGIEATVY-ETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV-TM---GKFIGAN 111 (354) Q Consensus 37 mda~~~~~~~~dA~~~~~fl~~~L~~id~~v~-e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~-G~---a~~~~~~ 111 (354) |. .....| -|-..+|+.+=.++. +.....+-..++||... ..++.+...... +. +.+++.. T Consensus 1 M~----~~~~~d-----~~~~~~l~~~i~~~~~~~~~~~~l~~~~fp~~~-----~~~~~~~~~~~~~~~~~~a~~~~~~ 66 (348) T protein:vir:98 1 MS----WTLDTE-----FIEPTQLTGLIREALRDLQVNRFRLARWLPNVD-----VDDITFEFLRGGGGLAETASYRSWD 66 (348) T ss_pred Cc----chhhhh-----ccCHHHHHHHHHHHhhccCcchhhHHhcCCCcc-----ccceEEEEEeccCCceeeeeeecCC Confidence 11 111011 122334443322222 22333466678888542 122333332221 11 2333333 Q ss_pred CCccceee-eccceeEEEEEEEEeeeeecHHHHHHHHHhCCC----cchH----HHHHHHHHHHHHhhheeeeee---hh Q lcl|NC_020082. 112 GQDLPRVA-QSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMP----IDAE----QARLAFRGAEEHSQSVAYFGD---SS 179 (354) Q Consensus 112 ~~dip~v~-~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~----ld~~----k~~aA~~~~~~~~n~~~f~G~---~~ 179 (354) +. .|... ...+..+..+..++..+.++..|+...++...+ .-.+ ...+.++..+...-++.+.|- .+ T Consensus 67 ~~-~~~~~r~g~~~~~~~~~~i~~~~~i~~~d~~~~~~~~~~~~~~~i~~d~~~l~~~i~~r~E~m~~qal~~Gki~~~g 145 (348) T protein:vir:98 67 TE-SKIGRREGLAKVMGELPPISEKIPLNEYDRLRLRKLSRDEALPFIARDAQRLARNIGARFEVARGSALVNATVPVTE 145 (348) T ss_pred Cc-cceeecccceeeeeeccccccccccCHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeEEEec Confidence 22 22222 234455666777778888888887765322110 0011 122233333333335555551 11 Q ss_pred hCceee-eecCCccceeccccccc-cCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhc-----cC----- Q lcl|NC_020082. 180 RGMYGL-FNNPNVTLSSATKDYKT-MNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQ-----LM----- 247 (354) Q Consensus 180 ~gi~GL-lN~p~~~~~~~~~~w~~-~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~-----~~----- 247 (354) .+. .+ ++.|.-...++++.|+. +++ .++.||.+.+..+...+ -..|..++|++..|..|.+- .+ T Consensus 146 ~~~-~vDyg~~~~~~~t~~~~Ws~~~~a-dp~~di~~~~~~~~~~~--G~~p~~~vm~~~~~~~l~~~~~i~~~~~~~~~ 221 (348) T protein:vir:98 146 LQQ-TVDFGRIGSHSVVAAVLWSVHATA-TPISDLESWVATYEDTN--GQSPGVILMPKAAVSHMRQCEEVIRQVFPLAP 221 (348) T ss_pred Cce-EEccccCcccccccccccCCCCCC-CHHHHHHHHHHHHHHcc--CCcceEEEeCHHHHHHHhcCHHHHHHHhccCc Confidence 121 11 22333333456678964 444 47899999998887543 34689999999999988531 00 Q ss_pred CCCCC-c---hHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccc------- Q lcl|NC_020082. 248 TGYTD-R---TVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIP------- 316 (354) Q Consensus 248 ~~~~~-~---Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~------- 316 (354) +.... . .+-.++...+ ++ .|....+. +... ++..+++ |+.....+|.. T Consensus 222 ~~~~~~~~~~~~~~~~~~~g------~~--~i~~~d~~----~~~~----g~~~~~~-----p~~~i~l~p~~~~~~~~~ 280 (348) T protein:vir:98 222 SGTAPMVSVEQLNTVLSSMG------LP--PIEVYDAK----VAVD----GVSTRIT-----PANAIALLPEPGATDAAQ 280 (348) T ss_pred cccccccCHHHHHHHHHhhC------Ce--EEEEeeeE----EEcC----Cceecee-----cCCeEEEEecCCcccccc Confidence 00000 0 0111221111 11 11111110 0000 0111110 11111111100 Q ss_pred -----hhccc-------------------------ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 317 -----FRMLA-------------------------PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 317 -----~~~~~-------------------------~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+... .+.+.....+...++. =..+.+|.++..+++= T Consensus 281 ~~~~G~t~~G~~~e~~~~~~~~~~~~~~~i~~~~~~~~dP~~~~~~~~s~~-lPv~~~~~~~~~a~Vl 347 (348) T protein:vir:98 281 PTELGATLLGTTAESLEDDYALAPGEQPGIVAATWKTKDPVRLWTHAAAVG-IPVLREPNLTFKAQVL 347 (348) T ss_pred cccccceecccchhhhccccccceeccCceeeeeeeecCCcEEEEEEeeee-eccccCCCcEEEEEEe Confidence 00000 0111112222222221 1355777777777766 No 168 >protein:vir:2736 Length: 348 # NCBI annotation: putative structural protein # Family: family:all:1083 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695109;genbank:gi:23455878;genbank:GeneID:955608 Probab=60.20 E-value=0.38 Score=22.91 Aligned_cols=287 Identities=11% Similarity=0.034 Sum_probs=108.5 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEE-eeecc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMY-RSYDG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~-~~~~~ 101 (354) |..+ .--|-..+|+..=.++ ......+-...+||... .. .. .+.+ ..... T Consensus 1 M~~i-------------------------~d~f~~~~l~~~v~~~-~~~~~~~l~~~~Fp~~~-~~-~~-~~~~~~~~~~ 51 (348) T protein:vir:27 1 MGLI-------------------------YDKVTASNIAGYFNAL-QENVSSTLGESIFPARK-QL-GT-KLSYIKGASG 51 (348) T ss_pred Ccch-------------------------hhhcCHHHHHHHHHhc-cchhhhhhHhhcCCCcc-cc-ce-eEEEEeeccC Confidence 1100 0112333332211111 11222344446777432 11 11 1211 11111 Q ss_pred cCc-eeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHH---------------HHHHHHH Q lcl|NC_020082. 102 VTM-GKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQA---------------RLAFRGA 165 (354) Q Consensus 102 ~G~-a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~---------------~aA~~~~ 165 (354) ... +.+++..+.....-...++..+..+..+.....++..|+...+...-......+ ...++.. T Consensus 52 ~~~~a~~v~~~~~~~~~~r~~~~~~~~~~p~i~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~~l~~~i~~r~ 131 (348) T protein:vir:27 52 QSVALKAAAFDTNVTIRDRVSAEMHDEQMPFFKEAMLVKENDRQQLNLVKDSGNAVLVNTIVAGIFNDNLTLVNGARARL 131 (348) T ss_pred ceeEeeeecCCCCcceecccceeeeeeecCccccccccCHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111 233433333211112234455666777777788888776654433222211111 1222333 Q ss_pred HHHhhheeeeee---hhhCceee--eecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHH Q lcl|NC_020082. 166 EEHSQSVAYFGD---SSRGMYGL--FNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWN 240 (354) Q Consensus 166 ~~~~n~~~f~G~---~~~gi~GL--lN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~ 240 (354) +...-++.+.|- .+.|..=- ++.|.-...++++.|++.++ .++.||.+....+.. .|. .|..++|+++.|. T Consensus 132 E~m~~~al~~Gki~i~~~~~~~~vdfg~~~~~~~t~~~~W~~~~a-dp~~di~~~~~~~~~--~G~-~~~~ii~~~~~~~ 207 (348) T protein:vir:27 132 EAMRMQVLATGKIAFTSDGVNKDIDYGVKPDHKKQVSKSWAEPGA-TPLADLEDAIETARE--LGL-NPERAVMNAKTFG 207 (348) T ss_pred HHHHHHHHhcCeeEEecCCeeEEEeecCCcccceeeeeccCCCCC-CHHHHHHHHHHHHHh--cCC-cccEEEECHHHHH Confidence 333334555552 22222111 12222222345567998766 478999999877753 364 8999999999999 Q ss_pred HHhhc-----cC----CCCCCc---hHHHHHHhcCceeecccccceEEeeceeeecccccccccc--CcceEEEEEEcCc Q lcl|NC_020082. 241 QANNQ-----LM----TGYTDR---TVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSN--SNKPRYMVYDKSD 306 (354) Q Consensus 241 ~L~~~-----~~----~~~~~~---Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~--~g~d~~v~y~~d~ 306 (354) .|.+- .+ ...... .+.+|+... .|.. |.....-.. +..|... -..+.++....+. T Consensus 208 ~l~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~------~g~~--i~~yd~~y~---d~~G~~~~~~p~~~vvl~~~~~ 276 (348) T protein:vir:27 208 LIRKAASTVKVIKPLAGDGSAVTKAELENYIADN------FGVS--IVLENGTYR---NDKGEVSKFYPDGHLTLIPNGP 276 (348) T ss_pred HHhcCHHHHHHhcccCccccccCHHHHHHHHHhh------cCce--EEEEeeEEE---cCCCcCcccccCCeEEEEcCCc Confidence 88531 11 111111 123333222 2222 221111110 0010000 0011111111110 Q ss_pred -ceEEEee-ccc----------hhcc--c--------ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 307 -RNLAMAN-PIP----------FRML--A--------PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 307 -~~~~~~v-p~~----------~~~~--~--------~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) -...... ++. .... + .+.......+...++ .=-.+.+|.++..+++- T Consensus 277 ~G~~~yG~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dP~~~~~~~~s~-~lPv~~~~~~~~~a~Vl 345 (348) T protein:vir:27 277 LGNTVFGTTPEESDLFADNTVNAEVEIVDNGIAVTTTKTTDPVNVQTKVSMV-ALPSFERLDDVYMLTVI 345 (348) T ss_pred ceeEEeccCcchhhhhhccccccceeeeCCeeEEEeeecCCCceEEEEEeee-eeccccCCCcEEEEEEe Confidence 0000000 000 0000 0 011111111212221 11356667777777766 No 169 >protein:vir:4902 Length: 348 # NCBI annotation: gp348 # Family: family:all:1083 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056680;genbank:gi:9635015;genbank:GeneID:1262657 Probab=58.92 E-value=0.4 Score=22.75 Aligned_cols=288 Identities=11% Similarity=0.034 Sum_probs=110.8 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |..+++ -|-.++|+..-+.+- .....+-...+||... .. ..+...+...... T Consensus 1 M~~l~d-------------------------~f~~~~l~~~v~~~~-~~~~~~l~~~~Fp~~~-~~-~~~~~~~~~~~~~ 52 (348) T protein:vir:49 1 MGLIYD-------------------------KVTASNIAGYFNALQ-ENVDSTLGESIFPARK-QL-GTKLSYITGASGQ 52 (348) T ss_pred Ccchhh-------------------------hcCHHHHHHHHHhcc-ccchhhhHhhcCCCcc-cc-CceeEEEEeecCc Confidence 111111 122333322111111 1122344456777432 11 1222222222222 Q ss_pred C-ceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHH---------------HHHHHHH Q lcl|NC_020082. 103 T-MGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQAR---------------LAFRGAE 166 (354) Q Consensus 103 G-~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~---------------aA~~~~~ 166 (354) . .+.+++..+.....-....+..+..+..+.....++..|+...+...-+-....++ ..++..+ T Consensus 53 ~~~a~~v~~~~~~~~~~r~~~~~~~~~~p~i~~~~~i~~~d~~~l~~~~~~~~~~~~~~~~~~i~~d~~~l~~~i~~r~E 132 (348) T protein:vir:49 53 SVALKAAAFDTNVTVRDRVSAEMHDEQMPFFKEAMLVKENDRQQLNLVKDSGNAALVNTIVAGIFNDNLTLVNGARARLE 132 (348) T ss_pred eeeeeeecCCCCcceecccceeeeeeecCccccccccCHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2 12344444333222223345556677777888888888766554443222222111 2333333 Q ss_pred HHhhheeeeee---hhhCc-eee-eecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHH Q lcl|NC_020082. 167 EHSQSVAYFGD---SSRGM-YGL-FNNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQ 241 (354) Q Consensus 167 ~~~n~~~f~G~---~~~gi-~GL-lN~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~ 241 (354) ...-++.+.|- .+.|. +.+ +..|.-...++++.|++.++ +++.||.+....+.. + |. .|.+++|+++.|.. T Consensus 133 ~m~~qal~~Gki~i~~~g~~~~vdyg~~~~~~~t~~~~W~~~~a-dp~~di~~~~~~~~~-~-G~-~~~~ii~~~~~~~~ 208 (348) T protein:vir:49 133 AMRMQVLATGKIAFTSDGVNKDIDYGVKPDHKKQVSKSWAEPGA-TPLADLEDAIETARE-L-GL-NPERAVMNAKTFGL 208 (348) T ss_pred HHHHHHHhCCeEEEecCCceEEEeecCCcccceeeeeccCCCCC-CHHHHHHHHHHHHHh-c-CC-cccEEEeCHHHHHH Confidence 33344455551 12221 111 12222222345568998766 588999999877754 3 64 79999999999998 Q ss_pred Hhhc-----cCC----CCCC---chHHHHHHhcCceeecccccceEEeeceeeeccccccccc--cCcceEEEEEEcCc- Q lcl|NC_020082. 242 ANNQ-----LMT----GYTD---RTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS--NSNKPRYMVYDKSD- 306 (354) Q Consensus 242 L~~~-----~~~----~~~~---~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g--~~g~d~~v~y~~d~- 306 (354) |.+- .+. .... ..+.+++...+ |+ .|.....-.. +..|.. --..+.++....+. T Consensus 209 l~~~~~v~~~~~~~~~~~~~i~~~~~~~~~~~~~------g~--~i~~y~~~y~---d~dG~~~~~~p~~~v~l~~~~~~ 277 (348) T protein:vir:49 209 IRKAASTVKVIKPLAGDGSSVTKAELDNYIADNF------GV--TVVLENGTYR---NEKGEVSKFFPDGHLTLIPNGPL 277 (348) T ss_pred HhcCHHHHHHhhccCcccccccHHHHHHHHHhhc------Cc--eEEEEeeEEE---ecCCcEeeeecCCeEEEecCCCc Confidence 8431 111 1111 12334443321 22 2221111000 000000 00001111111000 Q ss_pred ceEEEee-cc------------chhc-----cc---ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 307 RNLAMAN-PI------------PFRM-----LA---PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 307 ~~~~~~v-p~------------~~~~-----~~---~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) -...... ++ .++. .. .+.+.....+...++ .=..+.+|.++..+++- T Consensus 278 G~~~yg~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dP~~~~~~~~s~-~lPv~~~~~~~~~a~Vl 345 (348) T protein:vir:49 278 GNTVFGTTPEESDLFADNTVNADVEIVDNGIAVTTTKTTDPVNVQTKVSMV-ALPSFERLDDVYMLTVI 345 (348) T ss_pred ceeEEecChhhhhhccccccccceeecCCeEEEeeeecCCCceEEEEEeee-ccccccCCCcEEEEEEe Confidence 0000000 00 0000 00 001111111111111 11355677777777766 No 170 >protein:vir:7019 Length: 401 # NCBI annotation: major capsid protein # Family: family:all:2806 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853592;genbank:gi:31711674;genbank:GeneID:1481800 Probab=56.40 E-value=0.46 Score=22.45 Aligned_cols=291 Identities=9% Similarity=0.007 Sum_probs=124.4 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.++.- .++-.-.++.-..||....-.++...-+ .=..+.++.+.+ +. +..|+.+... T Consensus 1 Ms~~n~~t-----------~~~~~~sg~~~al~Le~f~GeV~taF~~----~si~~~~~~vRt-i~-~gkS~qf~~~--- 60 (401) T protein:vir:70 1 MSTPNNLT-----------NVAVSASGEVDSLLIEKFNGKVNEQYLK----GENIMSYFDVQT-VT-GTNTVSNKYL--- 60 (401) T ss_pred CCCCcccc-----------ccccccccchhHhHHhHhcchHHHHHHH----Hhhhcccceeee-ec-ccceEEEEEe--- Confidence 22221100 0000000122224555444445444422 122223333332 11 2234444433 Q ss_pred CceeEe-cCCCCccceeeeccceeEEEE--EEEEeeeeecHHHHHHHHHhCCC-cchHHHHHHHHHHHHHhhheeeeeeh Q lcl|NC_020082. 103 TMGKFI-GANGQDLPRVAQSAQMHTVPL--GYAGNECHYTLDEMRKSAAMNMP-IDAEQARLAFRGAEEHSQSVAYFGDS 178 (354) Q Consensus 103 G~a~~~-~~~~~dip~v~~~~~~~~~pv--~~~~~~~~~~~~El~~a~~~g~~-ld~~k~~aA~~~~~~~~n~~~f~G~~ 178 (354) |..+.- -..+..+-......++..+-| ..+..-+ +.+|+.++ .-.+ +..+-.+..-.++++..|+.++-=.. T Consensus 61 G~s~~~~~~pG~~ld~~~~~~dK~~ItID~lL~a~~~---V~dlDe~q-~~yD~vRse~s~e~G~ALA~~~Dq~iiq~i~ 136 (401) T protein:vir:70 61 GETELQVLAPGQSPAATSTQADKNQLVIDATVIARNT---VAHLHDVQ-GDIDSLKPKLATNQAKQLKRMEDEMLIQQMM 136 (401) T ss_pred eeeEeeeecCCCCcCCCCcccccEEEEeCceeehhhh---hhhHHHHH-hcccccchHHHHHHHHHHHHHHHHHHHHHHH Confidence 333321 011111111111111211111 2222222 34555554 3444 45566667777888877775521111 Q ss_pred hhCceeeee------cCCc------cceeccccccccCHHHHHHHHHHHHHHHHHHhCCc-ccccEEEeCHHHHHHHhhc Q lcl|NC_020082. 179 SRGMYGLFN------NPNV------TLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRF-HVPNTALMFPDLWNQANNQ 245 (354) Q Consensus 179 ~~gi~GLlN------~p~~------~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~-~~p~~L~l~p~~~~~L~~~ 245 (354) . -|+-| .|.. -..+...+=...+++++.+.|.++..+|.++ .+ ...+.+++||.-|..|... T Consensus 137 ~---aa~ana~~~~~~p~~~~~G~~i~v~~~~~~~~~~~~~l~~ai~dA~~~LdEk--dVP~~r~vvl~pp~~Ys~Ll~~ 211 (401) T protein:vir:70 137 L---GGIANTQAKRTNPRVKGHGFSINVEVAEGEALVNPQYVMAAVEFALEQQLEQ--EVDISDVAILMPWRYFNVLRDA 211 (401) T ss_pred H---hccccccccccCCCcCCCceEEeccccccccccCHHHHHHHHHHHHHHHHhc--CCCccceEEEcCHHHHHHHHhc Confidence 1 11111 1110 0111122223356899999999999998764 33 2346788899999877654 Q ss_pred --cCCCCCCchHHHHHHh-cCceeecccccceEEeeceeeeccccc-----------------ccc--ccCcceEEEEEE Q lcl|NC_020082. 246 --LMTGYTDRTVMQHFME-ANSYTLLTGNELDIQIRFQLDAAELAA-----------------NGV--SNSNKPRYMVYD 303 (354) Q Consensus 246 --~~~~~~~~Tvl~~l~~-n~~~~~~~g~~l~I~~~~~L~~~~~~~-----------------~g~--g~~g~d~~v~y~ 303 (354) .++- +|-.. ++. -..|.-+.+-.++.+++..+-. ... ++-.+-++++|. T Consensus 212 d~L~nr-------d~~~s~~g~--~~~G~v~~vaGv~Vv~SnnlP~~a~~it~~~ls~a~~G~~y~~~~d~s~~~~v~f~ 282 (401) T protein:vir:70 212 DRIVDK-------TYTISQSGA--TIQGFTLSSYNCPVIPSNRFPKYSQGQTHHLLSNEDNGYRYDPLPAMNGAIAVLFT 282 (401) T ss_pred Ccccch-------hhccccCCc--cccceEEEEeceEEEeeccccccccccccccccccCCCccCCCCccccceeEEEEe Confidence 1211 11111 111 1233344444444444443321 000 122345667775 Q ss_pred cCcceEEEeeccchhccc-ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLA-PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~-~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) ++. +.-.-.++++.-- -+.+...|.+.+.... |+..+||.|++-+-.+ T Consensus 283 ~~A--v~tvk~~~lt~~~~~d~r~~~~~id~~~a~-g~g~~RPeaa~vv~~k 331 (401) T protein:vir:70 283 ADA--LLVGRSIDVTGDIFYEKKEKTYYIDTFMAE-GAIPDRWEAVSVVTTK 331 (401) T ss_pred hhh--eEEEEeeccccchhhhhhhhHHHHHHHHHh-CCcccchhheEEEeec Confidence 442 1111113333211 1345566666666665 6999999999877544 No 171 >protein:vir:63741 Length: 468 # NCBI annotation: Cps # Family: family:all:2450 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547622;genbank:GeneID:3783474 Probab=53.18 E-value=0.53 Score=22.07 Aligned_cols=295 Identities=14% Similarity=0.104 Sum_probs=128.0 Q ss_pred ccccccc--------chhhhhhhhhhcCCccccc-hhhhhHHHHHHHHHHHHHHHHhhh--ccccchhhccccCCCCCce Q lcl|NC_020082. 23 VSRNGDQ--------WVINNTALDAIGNPNVMLD-ADGGIAFYISQLAGIEATVYETPY--GDITYRSDVPMAANIPEYA 91 (354) Q Consensus 23 ~~~~~~~--------~~~~~~amda~~~~~~~~d-A~~~~~fl~~~L~~id~~v~e~~~--~~l~~r~~v~v~~~~~~~~ 91 (354) |+.++.+ .+....+|.+...+.-+++ .+-.++-|.+ +.+|+++....+ .+++.-..++-. +..... T Consensus 1 ~~~~~~~~~~~~~~~~~~~e~~~Ks~~agy~~~p~~q~~~~AlR~--EsL~~~i~~L~~~~~~f~~~~di~k~-~a~stv 77 (468) T protein:vir:63 1 MPKNNKEEEVKEVNLNSVQEDALKSFTTGYGITPDTQTDAGALRR--EFLDDQISMLTWTENDLTFYKDIAKK-PATSTV 77 (468) T ss_pred CCCCcchhhccccChhHHHHHHHHHHHcCcccCCccccCcchhhh--hhhhhhhheeeecccchhhhhhcccc-hhhhhh Confidence 3333221 1222345555433332222 1222333433 456666655332 233333333321 122222 Q ss_pred eeE-EEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCC-CcchHHHHHHHHHHHHHh Q lcl|NC_020082. 92 DTW-MYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNM-PIDAEQARLAFRGAEEHS 169 (354) Q Consensus 92 ~~~-~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~-~ld~~k~~aA~~~~~~~~ 169 (354) ..+ .+.....+|.+..++... ..+..+.++.|++..+..++..-..++.--. ..++ +......+.|...+++.. T Consensus 78 ~~y~~~~~~G~~g~~~f~~E~g-~~~~~~~~~~r~~~~~k~l~~~~~vs~~~~l---~n~i~d~~~~~~~~ai~~~a~ti 153 (468) T protein:vir:63 78 AKYDVYMQHGKVGHTRFTREIG-VAPVSDPNIRQKTVNMKFASDTKNISIAAGL---VNNIQDPMQILTDDAIVNIAKTI 153 (468) T ss_pred hhheeeeccCcccccccccccc-ccccCCCceEEEEEEeeeeeeeeeehhhhhh---hcchhhHHHHHHHHHHHHHHHHH Confidence 222 222344556666655543 3456677888898888888887777653222 1121 444777778888999999 Q ss_pred hheeeeeehhh----------Cceeeee--cCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHH Q lcl|NC_020082. 170 QSVAYFGDSSR----------GMYGLFN--NPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPD 237 (354) Q Consensus 170 n~~~f~G~~~~----------gi~GLlN--~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~ 237 (354) ....||||+.+ ...||++ +|. .+..+.+... + -++|+++...+ +.|+-.|.-+.||+. T Consensus 154 E~a~FyGds~l~~s~~~~~glqfDGi~~li~~e-nviDa~G~~l--s----~~~lneaa~~i---~~gfG~~td~~~~~~ 223 (468) T protein:vir:63 154 EWASFFGDSDLSDSPEPQAGLEFDGLAKLINQD-NVHDARGASL--T----ESLLNQAAVMI---SKGYGTPTDAYMPVG 223 (468) T ss_pred HHHhhhcccccccCCCccccccccceeEEecCC-ceeccCCCcc--C----HHHHHHHhhhc---cccccChhhhhcchh Confidence 99999998755 3445543 232 2233333221 2 24556554332 236778999999999 Q ss_pred HHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEeeccch Q lcl|NC_020082. 238 LWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMANPIPF 317 (354) Q Consensus 238 ~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~vp~~~ 317 (354) ....|....+....-+ ...|+ .....|.++ +.+.++.++.+-. | ..+. .+...+...++-.- T Consensus 224 v~a~~~~~~L~~q~~v-----~~~n~-~~~~~G~~v-----~g~~sa~G~I~l~---g---s~il-~~~~~l~~~~~~~~ 285 (468) T protein:vir:63 224 VQADFVNQQLSKQTQL-----VRDNG-NNVSVGFNI-----QGFHSARGFIKLH---G---STVM-ENEQILDERILALP 285 (468) T ss_pred HHhhhhhhhcCceEEE-----EcCCC-Cceeeeecc-----cceecceeeeeec---C---ceee-ccccCCCccccccc Confidence 9988854443332211 11111 122223332 1122221111111 1 1111 12222222111000 Q ss_pred hcccccccCc---eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 318 RMLAPQMASL---GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 318 ~~~~~~~~~~---~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . ++.+-.+ +.........+|..--|-+.++.+|=. T Consensus 286 -~-Apsp~~vsaT~~~~~~g~~~~~~~a~y~Y~v~~vs~~ 323 (468) T protein:vir:63 286 -T-APQPAKVTATQEAGKKGQFRAEDLAAHEYKVVVSSDD 323 (468) T ss_pred -c-cccCCccceeeecccCCcccCCCcceEEEEEEEECCC Confidence 0 1111011 111001111122212233444444444 No 172 >protein:vir:80491 Length: 467 # NCBI annotation: Cps # Family: family:all:2450 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468466;genbank:gi:157325041;genbank:GeneID:5601449 Probab=39.09 E-value=1 Score=20.50 Aligned_cols=302 Identities=15% Similarity=0.092 Sum_probs=126.7 Q ss_pred CcccccchHHhhhccceeecCccccccccchhhhhhhhhhcCCccccc-hhhhhHHHHHHHHHHHHHHHHhhh--ccccc Q lcl|NC_020082. 1 MAIKTIDAQTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLD-ADGGIAFYISQLAGIEATVYETPY--GDITY 77 (354) Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~d-A~~~~~fl~~~L~~id~~v~e~~~--~~l~~ 77 (354) |--+ .+.-+...+.+..-+ ..|.+...+.-+++ .+-.++-|.+ +.+|+.+....+ .+++. T Consensus 1 ~~~~--------------~~~~~~~~n~~~~~e-~~~Ks~~agy~~~p~tq~~~~AlR~--EsL~~~i~~Lt~~~~~f~~ 63 (467) T protein:vir:80 1 MPKN--------------NKEEVKEVNLNSVQE-DALKSFTTGYGITPDTQTDAGALRR--EFLDDQISMLTWTENDLTF 63 (467) T ss_pred CCCc--------------chhhhhhcccccCHH-HHHHHHHcccccCCccccCcchhhh--hhhhhhhheeeccccchhh Confidence 1100 011111112211122 23444332222221 1222333333 456666655332 23333 Q ss_pred hhhccccCCCCCceeeE-EEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCC-Ccch Q lcl|NC_020082. 78 RSDVPMAANIPEYADTW-MYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNM-PIDA 155 (354) Q Consensus 78 r~~v~v~~~~~~~~~~~-~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~-~ld~ 155 (354) -..++-. +.......+ .+.....+|.+..++... ..+..+.++.|++..+..++..-..++.--. ..++ +... T Consensus 64 ~~di~k~-~a~stv~~y~~~~~~G~~g~~~f~~E~g-~~~~~~~~~~r~~~~~k~l~~~~~vs~~~~l---~n~i~d~~~ 138 (467) T protein:vir:80 64 YKDIAKK-PATSTVAKYDVYMQHGKVGHTRFTREIG-VAPVSDPNIRQKTVNMKFASDTKNISIAAGL---VNNIQDPMQ 138 (467) T ss_pred hhhcccc-hhhhhhhhheeeeccCcccccccccccc-ccccCCCceEEEEEEeeeeeeeeeehhhhhh---hcchhhHHH Confidence 3333321 122222222 222344556666655543 3456677888898888888887777653222 1121 4447 Q ss_pred HHHHHHHHHHHHHhhheeeeeehhh----------Cceeeee--cCCccceeccccccccCHHHHHHHHHHHHHHHHHHh Q lcl|NC_020082. 156 EQARLAFRGAEEHSQSVAYFGDSSR----------GMYGLFN--NPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLS 223 (354) Q Consensus 156 ~k~~aA~~~~~~~~n~~~f~G~~~~----------gi~GLlN--~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s 223 (354) ...+.|...+++......||||+.+ ...||++ +|. .+..+.+... + -++|+++...+ + T Consensus 139 ~~~~~ai~~~a~tiE~a~FyGds~l~~s~~~~~glqfDGi~~li~~e-nviDa~G~~l--s----~~~lneaa~~i---~ 208 (467) T protein:vir:80 139 ILTDDAIVNIAKTIEWASFFGDSDLSDSPEPQAGLEFDGLAKLINQD-NVHDARGASL--T----ESLLNQAAVMI---S 208 (467) T ss_pred HHHHHHHHHHHHHHHHHhhhcccccccCCCccccccccceeEEecCC-ceeccCCCcc--C----HHHHHHHhhhc---c Confidence 7777888899999999999998755 3445543 232 2233333221 2 24556554332 2 Q ss_pred CCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEE Q lcl|NC_020082. 224 RRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYD 303 (354) Q Consensus 224 ~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~ 303 (354) .|+-.|.-+.||+.....|....+....-+ ...|+ .....|.++ +.+.++.++.+-. | ..+. T Consensus 209 ~gfG~~td~~~p~~v~a~~~~~~L~~q~~v-----~~~n~-~~~~~G~~v-----~g~~sa~G~I~l~---g---s~il- 270 (467) T protein:vir:80 209 KGYGTPTDAYMPVGVQADFVNQQLSKQTQL-----VRDNG-NNVSVGFNI-----QGFHSARGFIKLH---G---STVM- 270 (467) T ss_pred ccccChhhhhcchhHHhhhhhhhcCceEEE-----EcCCC-Cceeeeecc-----cceecceeeeeec---C---ceee- Confidence 367789999999999988854443332211 11111 122223332 1122221111111 1 1111 Q ss_pred cCcceEEEeeccchhcccccccCc---eeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 304 KSDRNLAMANPIPFRMLAPQMASL---GITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 304 ~d~~~~~~~vp~~~~~~~~~~~~~---~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .+...+...++-.- . ++.+-.+ +.........+|..--|-+.++.+|=. T Consensus 271 ~~~~~l~~~~~~~~-~-Apsp~~vsaT~~~~~~g~~~~~~~a~y~Y~v~~vs~~ 322 (467) T protein:vir:80 271 ENEQILDERILALP-T-APQPAKVTATQEAGKKGQFRAEDLAAHEYKVVVSSDD 322 (467) T ss_pred ccccCCCccccccc-c-cccCCccceeeecccCCcccCCCcceEEEEEEEECCC Confidence 12222222111000 0 1111011 111001111122212233444444444 No 173 >protein:vir:102335 Length: 312 # NCBI annotation: putative capsid protein # Family: family:all:701 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529560;genbank:gi:90592716;genbank:GeneID:3974467 Probab=38.54 E-value=1.1 Score=20.44 Aligned_cols=282 Identities=10% Similarity=0.048 Sum_probs=106.6 Q ss_pred hhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhc-cccch-hhccccCCCCCceeeEEEeeecccCceeEecCCC Q lcl|NC_020082. 35 TALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYG-DITYR-SDVPMAANIPEYADTWMYRSYDGVTMGKFIGANG 112 (354) Q Consensus 35 ~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~-~l~~r-~~v~v~~~~~~~~~~~~~~~~~~~G~a~~~~~~~ 112 (354) || .. ..+.......||+.+....+. .|..- ..+- --++.++........|.+.---+.+ T Consensus 1 Ma----------nt----l~ya~~~~~~LD~~~~~~~~s~~l~~~~~~v~-----~~ggktVkIp~i~~~gl~DY~R~~g 61 (312) T protein:vir:10 1 MA----------NT----LAYGQVLQQGLDKQATQELLTGWMDSNAKQIK-----YEGGKEVKIGKLSTDGLGDYSRGSA 61 (312) T ss_pred CC----------cc----hhHHHHHHHHHHHHHHhhhccccccCCCceEE-----EecCcEEEEEeeecccccccccccC Confidence 11 00 111222234566665543322 22111 1111 1356677777777666553211111 Q ss_pred CccceeeeccceeEEEEEEEEeeeeecHH--HHHHHHHhCCCcchHHHHHHHHHHHHHhhheeeeeehhhCceeeeecCC Q lcl|NC_020082. 113 QDLPRVAQSAQMHTVPLGYAGNECHYTLD--EMRKSAAMNMPIDAEQARLAFRGAEEHSQSVAYFGDSSRGMYGLFNNPN 190 (354) Q Consensus 113 ~dip~v~~~~~~~~~pv~~~~~~~~~~~~--El~~a~~~g~~ld~~k~~aA~~~~~~~~n~~~f~G~~~~gi~GLlN~p~ 190 (354) +.-..-+++..+++..+-. ..++.+.+. |++.... ...++....++....+.==...+.+.-|...-. T Consensus 62 ~~~~~g~v~~~~et~tl~q-DR~~~F~vD~mDvDETn~---------~~s~anv~~ef~r~~vvPEiDayrfskla~~a~ 131 (312) T protein:vir:10 62 NAYVGGDVKFEYETKTMTQ-DRGRKFTLDAMDVDETNF---------LVTATTVMGEFQRLKVIPEIDAYRLSRLATIAI 131 (312) T ss_pred CccccccccccceeEEeee-cccceeeccccchhhHhh---------HHHHHHHHHHHHHhhhcchhhHHHHHHHHhhhh Confidence 1111123444555554433 344444444 4443321 111222333322222111111111111110000 Q ss_pred c-cceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHHHHhhccCCCCCCchHHHHHHhcC---cee Q lcl|NC_020082. 191 V-TLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWNQANNQLMTGYTDRTVMQHFMEAN---SYT 266 (354) Q Consensus 191 ~-~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~---~~~ 266 (354) . ......+.=.+.|.+.+++.|.++..++.+. |+.++..|.++|..+..|.+... ... +..+ +.+.+ ... T Consensus 132 ~~~~~~~~~~~~~~T~~ni~~~i~~~~~~lde~--~vp~~rvl~vTp~~~~lLk~~~~-~~~--~~~~-~~~~~i~~~V~ 205 (312) T protein:vir:10 132 GIKGDTNVEYSYSVNSSTIINKIKTGIKIIREN--GYNGPLVCHLTYDSMFAIEEKVL-EKL--TAVT-FAQGGIQTQVP 205 (312) T ss_pred ccccccccccccccCHHHHHHHHHHHHHHHHHc--cCCCceEEEeChHHHHHHhhhhh-cee--cccc-cccceeeeeee Confidence 0 0000000001246889999999999999885 66678899999999988864211 111 1001 11111 112 Q ss_pred ecccccceEEeeceeeeccccccc-----------cccCcce--EEEEEEcCcceEEEeeccchhccccccc--CceeEE Q lcl|NC_020082. 267 LLTGNELDIQIRFQLDAAELAANG-----------VSNSNKP--RYMVYDKSDRNLAMANPIPFRMLAPQMA--SLGITV 331 (354) Q Consensus 267 ~~~g~~l~I~~~~~L~~~~~~~~g-----------~g~~g~d--~~v~y~~d~~~~~~~vp~~~~~~~~~~~--~~~~~~ 331 (354) ...|.++--.|..-+.++.-...| ..+++++ .+++-. .-.+...--..++.++|... .-.|+. T Consensus 206 ~iDgv~Ii~VPs~r~~t~~~f~dG~t~~~~~gg~~~~~~ak~INfiiv~~--~a~i~~~K~~~~~if~P~~~~~~d~~~~ 283 (312) T protein:vir:10 206 SIDGCALIKTPQNRMYSSILLNDGTTSNQTAGGYLKGTKALDTNFIIAPV--DVPLAITKQDKMRIFDPETNQTANAWSM 283 (312) T ss_pred eecccEEEEchhhhccceeeeccCcccccccCceeecCcccccceEEeCC--ceeeceeeeeeeeeeCCCCCCCcceeee Confidence 233333222222222222111111 1122333 333221 11111111122333444322 224555 Q ss_pred eeeeeeeeEEEEC-cceeeeeecC Q lcl|NC_020082. 332 PAEYKISGTEFRY-PLCAAYVDMA 354 (354) Q Consensus 332 ~~~~~~gGv~i~~-P~ai~y~D~~ 354 (354) .+.. +..+.|+- -..-.|+.+. T Consensus 284 ~~R~-Y~D~fv~~nk~~~Iyv~~k 306 (312) T protein:vir:10 284 DYRR-YHDLWVTDNKANSVYANFK 306 (312) T ss_pred eeee-eeeeeeeccccCeEEEEee Confidence 4332 34444432 2333456665 No 174 >protein:vir:103323 Length: 364 # NCBI annotation: major capsid-like protein # Family: family:all:2806 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039668;genbank:gi:125999997;genbank:GeneID:4818399 Probab=28.48 E-value=1.7 Score=19.26 Aligned_cols=294 Identities=8% Similarity=-0.001 Sum_probs=126.0 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeeeccc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSYDGV 102 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~~~~ 102 (354) |.+.+ ....|+-.-.++.--.|+....-.+++..-+ .=..+.++.+.+ +. +..|+.+... T Consensus 1 ms~~n-----------~~t~~~~~~~~~~~al~le~f~geV~taf~~----~s~~~~~~~~rt-i~-~gkS~q~~~i--- 60 (364) T protein:vir:10 1 MSNPN-----------VLTQPAVSASGEVDSLLIEKFNNRVHEQYLK----GENLLQWFDVQE-VV-GTNSVSNKYI--- 60 (364) T ss_pred CCCcc-----------cccccccccccchhhhhhhhhhhhHHHHHHH----HHhhcCcceeee-ec-ccceEEeeee--- Confidence 22211 0001111111122234665444455555422 222223333322 22 3334444433 Q ss_pred CceeEec-CCCCccceeeeccceeEEEE--EEEEeeeeecHHHHHHHHHhCCC-cchHHHHHHHHHHHHHhhheeeeeeh Q lcl|NC_020082. 103 TMGKFIG-ANGQDLPRVAQSAQMHTVPL--GYAGNECHYTLDEMRKSAAMNMP-IDAEQARLAFRGAEEHSQSVAYFGDS 178 (354) Q Consensus 103 G~a~~~~-~~~~dip~v~~~~~~~~~pv--~~~~~~~~~~~~El~~a~~~g~~-ld~~k~~aA~~~~~~~~n~~~f~G~~ 178 (354) |..++.. ..+..+-.....-++..+-+ ..+.. .-+.+++.++ ...+ ++.+-...+..++++..|+.++-=.. T Consensus 61 G~~~~~~~~~G~~ld~~~~~~~k~~itID~ll~a~---~~V~diDe~q-~~~D~vR~e~s~e~G~ALA~~~Dq~i~~~v~ 136 (364) T protein:vir:10 61 GETELQVLSPGKSPDASPTEFDKNRLVVDTTVIAR---NTVAHFHDVQ-NDIDGLKSKLSVNQAKKLKKMEDSMVIQQLV 136 (364) T ss_pred eeeEEeeeccCcccCCCCcccCcEEEEecceeeec---hhhhhHHHHh-cCccchhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 4444311 01111111111111212211 11112 2245666664 4555 45666678888999988887751010 Q ss_pred h---hCceeeeecCCccc-----e-eccccccccCHHHHHHHHHHHHHHHHHHhCCc--ccccEEEeCHHHHHHHhhc-- Q lcl|NC_020082. 179 S---RGMYGLFNNPNVTL-----S-SATKDYKTMNGQELFNMLNAPIFSVINLSRRF--HVPNTALMFPDLWNQANNQ-- 245 (354) Q Consensus 179 ~---~gi~GLlN~p~~~~-----~-~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~--~~p~~L~l~p~~~~~L~~~-- 245 (354) . .+..+-.+.|.... . .....=...+++.+++-|.++...|.++ .+ .+ ..++|+|..|..|..- T Consensus 137 ~aa~a~~~~~~~~~~~~~~g~~i~~~~~a~~~~~~~~~l~~ai~~a~~~LdEk--dVP~~~-R~~vv~P~~y~~Ll~~~~ 213 (364) T protein:vir:10 137 LGGISNTEAIRKNPRVAGHGFSIHIVGLASSFLTSPQYMMAAIEMAMEQQTEQ--EVDTSE-LCGLMPWTAFNCLRDADR 213 (364) T ss_pred hhhhhcccccccCCcccCCcceeeecccCcchhhhHHHHHHHHHHHHHHHhhc--CCCccc-cEEEeChHHHHHHhcCCc Confidence 0 11222222221110 0 0011112345778888888888888764 22 22 5899999999988753 Q ss_pred cCCCCCCchHHHHHHhcCceeecccccceEEeeceeeecccccc------------------cccc-----C--cceEEE Q lcl|NC_020082. 246 LMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAAN------------------GVSN-----S--NKPRYM 300 (354) Q Consensus 246 ~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~------------------g~g~-----~--g~d~~v 300 (354) .++- +|.-.++ .....|.-+.+..++.+++..+-.. +.|. + .+-+++ T Consensus 214 lvn~-------d~~~~~~-~~~~~G~v~~v~Gv~Vv~Sn~lP~~~~~~~~t~~~t~h~ls~~~~g~~y~v~~d~~~~~~~ 285 (364) T protein:vir:10 214 IVDK-------SYTIAAS-DNTVDGFVLKSWNTPIVPSNRFPKLSDNTEGTGNTKHHKLSNAGNGNRYDVTAGQTSAQAV 285 (364) T ss_pred cccc-------cccccCC-CccccceeEEEeceEEEeccccccccccccccccccccccccccCCcccccccccceeEEE Confidence 1211 1111110 0012333344444444444443110 0000 1 144566 Q ss_pred EEEcCcceEEEeeccchhcccc-cccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 301 VYDKSDRNLAMANPIPFRMLAP-QMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 301 ~y~~d~~~~~~~vp~~~~~~~~-~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) +|.+ +-+.-.-.++++.--- +.+...|...+... -|+-++||.+++-+=-+ T Consensus 286 ~f~~--~Al~tv~~~~~t~e~~~~~~~~~~~ida~~a-~G~g~lRPeaa~~i~~~ 337 (364) T protein:vir:10 286 LFTQ--DALLVGRTISITGDIFYEKKEKTWYIDTFLA-EGAIPDRWEAVAVVTAA 337 (364) T ss_pred EEec--ceEEEEEEecceeeeeeccceeeeeeeeehc-ccCcccCccceEEEEec Confidence 6643 3333222233333211 33445666666655 47999999998877544 No 175 >protein:vir:80835 Length: 464 # NCBI annotation: putative major capsid protein # Family: family:all:2450 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504125;genbank:gi:158079312;genbank:GeneID:5666484 Probab=24.17 E-value=2.2 Score=18.70 Aligned_cols=299 Identities=13% Similarity=0.083 Sum_probs=118.8 Q ss_pred HHhhhccceeecCccccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhh--ccccchhhccccCC Q lcl|NC_020082. 9 QTIQGNQWLVHKGYVSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPY--GDITYRSDVPMAAN 86 (354) Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~--~~l~~r~~v~v~~~ 86 (354) -+++.|.-.+++..-.. .. + ++.+- -+..-|++-.++-|.+ +.+|+.+...-+ .+++.-+.++-. + T Consensus 1 ~~~~~n~~~~~~~~~e~----~~--K-s~ttg--y~~~p~~q~~~~AlRr--EsL~~~i~~Lt~~~~~f~f~~di~k~-~ 68 (464) T protein:vir:80 1 MTEKKNTERQLTSVQEE----VI--K-GFTTG--YGITPESQTDAAALRR--EFLDDQITMLTWADGDLSFYRDITKR-P 68 (464) T ss_pred CCcchhhHhhcCcccHH----HH--H-HHHhC--CccCcccccCcchhhh--hhhhhhhheeeecccchhhhhhcCCc-h Confidence 23334433333332221 11 1 34431 2222222322333444 455666654322 233333333321 2 Q ss_pred CCCceeeE-EEeeecccCceeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHhCCCcchHHHHHHHHHH Q lcl|NC_020082. 87 IPEYADTW-MYRSYDGVTMGKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAMNMPIDAEQARLAFRGA 165 (354) Q Consensus 87 ~~~~~~~~-~~~~~~~~G~a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~g~~ld~~k~~aA~~~~ 165 (354) .......+ .|.....+|.+..++..+ ..+..+.++.|++..+..+......++.- ...+- +.+--....+.|...+ T Consensus 69 a~STV~~y~~~~~~G~~g~~~f~~E~g-~~~~~d~~~~Rr~~~~Kfl~~~r~vsia~-~lvn~-~~d~~~~~~~dai~~v 145 (464) T protein:vir:80 69 ATSTVAKYDVYLAHGRVGHTRFTREIG-VAPISDPNLRQKTVNMKYVSDTKNMSIAT-GLVNN-IEDPMRILTDDAISVV 145 (464) T ss_pred hhhhhhhhheeeccCcccccccccccc-ccccCCCceEEEEEEeeeeecceeeeeeh-hhhcc-hhhHHHHHHHHHHHHH Confidence 22222222 222344556666655543 34566777888888777666555553311 11111 2233346666888899 Q ss_pred HHHhhheeeeeehhhC----------ceeeee--cCCccceeccc-cccccCHHHHHHHHHHHHHHHHHHhCCcccccEE Q lcl|NC_020082. 166 EEHSQSVAYFGDSSRG----------MYGLFN--NPNVTLSSATK-DYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTA 232 (354) Q Consensus 166 ~~~~n~~~f~G~~~~g----------i~GLlN--~p~~~~~~~~~-~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L 232 (354) ++......||||+++. ..||.+ +|.- +..+.+ ..+ .+.|+++-..+ +.++-.|+-+ T Consensus 146 a~tiE~a~FyGds~l~~~~~~~~gleFDGl~~lI~~~N-ViDarG~~Ls-------~~~ln~Aa~~i---~~~fGt~TD~ 214 (464) T protein:vir:80 146 AKTIEWASFYGDSDLSENPDAGSGLEFDGLAKLIDKHN-VLDAKGASLT-------EALLNQASVLV---GKGYGTPTDA 214 (464) T ss_pred HHHHHHHHhhhccccCCCCCCccccchhhhHhhcCCCc-eeecCCCCcC-------HHHHhhhhhhh---hcccCChhhc Confidence 9999999999987654 334432 2221 122221 111 24555443333 3477889999 Q ss_pred EeCHHHHHHHhhccCCCCCCchHHHHHHhcCceeecccccceEEeeceeeeccccccccccCcceEEEEEEcCcceEEEe Q lcl|NC_020082. 233 LMFPDLWNQANNQLMTGYTDRTVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVSNSNKPRYMVYDKSDRNLAMA 312 (354) Q Consensus 233 ~l~p~~~~~L~~~~~~~~~~~Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g~~g~d~~v~y~~d~~~~~~~ 312 (354) .||......+....+..+.-+ +..|+... ..|. .++.+.++-++..-- ++. .. .++..+... T Consensus 215 ~lp~~v~a~f~n~~l~~q~~~-----~~~n~~~~-~~G~-----~v~~f~sa~G~i~L~---~s~---~m-~~~~~ld~~ 276 (464) T protein:vir:80 215 YMPIGVQADFVNQQLDRQVQV-----ISDNGQNA-TMGF-----NVKGFNSARGFIRLH---GST---VM-ELEQILDEN 276 (464) T ss_pred ccchhHHHHHHhhhcCceeEE-----EcCCCCcc-eeee-----ecccccccccceecc---Ccc---cc-Ccccccccc Confidence 999999988754433332211 11222211 1111 112221111110000 000 00 111111100 Q ss_pred ------eccchhcc-ccccc------------CceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 313 ------NPIPFRML-APQMA------------SLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 313 ------vp~~~~~~-~~~~~------------~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) .|.+-+.. .+++. ..+|++...+.-|. -.|..++-+-++ T Consensus 277 ~~~~~~apaapsvt~tv~~~~~g~f~~~~~~~~~~Ykv~~vn~~Ge---S~ps~~~~~ti~ 334 (464) T protein:vir:80 277 RMQLPNAPQKATVKATLEAGTKGKFRDEDLTIDTEYKVVVVSDDAE---SAPSDVASVVID 334 (464) T ss_pred cccCCCCcCCceeEEEecCCcccCCccccccceeEEEEEEECCCCc---cccceeeeeeec Confidence 11111100 01111 11233333222221 012111111111 No 176 >protein:vir:96490 Length: 348 # NCBI annotation: head protein # Family: family:all:1083 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238492;genbank:gi:66391768;genbank:GeneID:5176912 Probab=21.45 E-value=2.6 Score=18.31 Aligned_cols=287 Identities=11% Similarity=0.035 Sum_probs=109.7 Q ss_pred cccccccchhhhhhhhhhcCCccccchhhhhHHHHHHHHHHHHHHHHhhhccccchhhccccCCCCCceeeEEEeee-cc Q lcl|NC_020082. 23 VSRNGDQWVINNTALDAIGNPNVMLDADGGIAFYISQLAGIEATVYETPYGDITYRSDVPMAANIPEYADTWMYRSY-DG 101 (354) Q Consensus 23 ~~~~~~~~~~~~~amda~~~~~~~~dA~~~~~fl~~~L~~id~~v~e~~~~~l~~r~~v~v~~~~~~~~~~~~~~~~-~~ 101 (354) |... .| -|-.++|+..-+.+ ......+-...+||.... .. ..+.+... .. T Consensus 1 M~~i--------------------~d-----~f~~~~l~~~i~~~-~~~~~~~l~~~~Fp~~~~-~~--~~~~~~~~~~~ 51 (348) T protein:vir:96 1 MGLI--------------------YD-----KVTASNIAGYFNTL-QENVDSTLGESIFPARKQ-LG--TKLSYIKGASG 51 (348) T ss_pred Ccch--------------------hh-----ccCHHHHHHHHHhc-ccchhhhhhhhcCCCccc-cc--eeEEEEeecCC Confidence 1100 00 13333332211111 112334455677774321 11 11222111 11 Q ss_pred cCc-eeEecCCCCccceeeeccceeEEEEEEEEeeeeecHHHHHHHHHh---CCCcchHH--------HH----HHHHHH Q lcl|NC_020082. 102 VTM-GKFIGANGQDLPRVAQSAQMHTVPLGYAGNECHYTLDEMRKSAAM---NMPIDAEQ--------AR----LAFRGA 165 (354) Q Consensus 102 ~G~-a~~~~~~~~dip~v~~~~~~~~~pv~~~~~~~~~~~~El~~a~~~---g~~ld~~k--------~~----aA~~~~ 165 (354) ... +.+++..+.....-...++..+..+..+.....++..|+...+.. +.+-..+. .. ..++.. T Consensus 52 ~~~~a~~v~~~~~~~~~~r~~~~~~~~~~p~i~~~~~i~~~d~~~l~~~~~~~~~~~~~~~~~~i~~d~~~l~~~i~~r~ 131 (348) T protein:vir:96 52 QSVALKAAAFDTNVTIRDRVSAEIHDEQMPFFKEALLVKENDRQQLNLVKDTGNEALINTIVAGIFNDDVTLINGARARL 131 (348) T ss_pred ceeEeeeecCCCCcceecccceeeeeeecCccccccccCHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111 334443333222222334555667777777777887776544332 22211111 11 122222 Q ss_pred HHHhhheeeeee---hhhCceeee--ecCCccceeccccccccCHHHHHHHHHHHHHHHHHHhCCcccccEEEeCHHHHH Q lcl|NC_020082. 166 EEHSQSVAYFGD---SSRGMYGLF--NNPNVTLSSATKDYKTMNGQELFNMLNAPIFSVINLSRRFHVPNTALMFPDLWN 240 (354) Q Consensus 166 ~~~~n~~~f~G~---~~~gi~GLl--N~p~~~~~~~~~~w~~~T~~ei~~di~~~~~~l~~~s~g~~~p~~L~l~p~~~~ 240 (354) +...-++.++|- .+.|..--+ ..|.-...+.++.|+++++ +++.||.+....+.. .|. .|.+++|+++.|. T Consensus 132 E~m~~qal~~Gki~~~~~~~~~~vdfg~~~~~~~t~~~~W~~~~a-dp~~di~~~~~~~~~--~G~-~~~~~i~~~~~~~ 207 (348) T protein:vir:96 132 EAMRMQVLATGKIAFTSDGVNKDIDYGVKADHKKQVSKSWAEPGA-TPLADLEDAIETARE--LGL-NPERAIMNAKTFG 207 (348) T ss_pred HHHHHHHHhcCeeEeecCCeeEEEeccCCcccceeeccccCCCCC-CHHHHHHHHHHHHHh--cCC-cccEEEeCHHHHH Confidence 233334455551 122211111 1122222345568998766 588999999877653 364 7899999999999 Q ss_pred HHhhc---------cCCCCCCc---hHHHHHHhcCceeecccccceEEeeceeeeccccccccc--cCcceEEEEEEcCc Q lcl|NC_020082. 241 QANNQ---------LMTGYTDR---TVMQHFMEANSYTLLTGNELDIQIRFQLDAAELAANGVS--NSNKPRYMVYDKSD 306 (354) Q Consensus 241 ~L~~~---------~~~~~~~~---Tvl~~l~~n~~~~~~~g~~l~I~~~~~L~~~~~~~~g~g--~~g~d~~v~y~~d~ 306 (354) .|.+- .......+ -+.+|+... .|. .|.....-.. +..|.. --..+.++....+. T Consensus 208 ~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~--~i~~y~~~y~---d~~G~~~~~~p~~~v~l~~~~~ 276 (348) T protein:vir:96 208 LIRKAASTVKAIKPLAGDGSSVTKAELQNYVADN------YGV--EIVLENGTYR---NEKGEVSKFFPDGHLTLIPNGP 276 (348) T ss_pred HHhcCHHHHHHHhccCCccccccHHHHHHHHhhh------cCc--eEEEEccEEE---ecCCcEeccccCCeEEEEcCCC Confidence 88531 11111111 122333222 122 2221111100 001000 00011111111110 Q ss_pred c-eEEEe-ecc----------chhc-------cc---ccccCceeEEeeeeeeeeEEEECcceeeeeecC Q lcl|NC_020082. 307 R-NLAMA-NPI----------PFRM-------LA---PQMASLGITVPAEYKISGTEFRYPLCAAYVDMA 354 (354) Q Consensus 307 ~-~~~~~-vp~----------~~~~-------~~---~~~~~~~~~~~~~~~~gGv~i~~P~ai~y~D~~ 354 (354) . ..... +++ .... .+ .+.......+...++ .=..+.+|.++..+++- T Consensus 277 ~G~~~yg~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dP~~~~~~~~s~-plPv~~~~~~~~~a~Vl 345 (348) T protein:vir:96 277 LGNTVFGTTPEESDLFADNTVNADVEIVDSGIAVTTTKTTDPVNVQTKVSMV-ALPSFERLGDVYMLTVI 345 (348) T ss_pred ceeEEeccChhhhhhhhcccccccceecCCeeEEEeeecCCCceEEEEEeee-eeccccCCCcEEEEEEe Confidence 0 00000 000 0000 00 011111222222222 12367778888887776 Done!