Query lcl|NC_019912.1_cdsid_YP_007236404.1 [gene=ISGA_46] [protein=hypothetical protein] [protein_id=YP_007236404.1] [location=30370..30735] Match_columns 121 No_of_seqs 3 out of 6 Neff 1.5 Searched_HMMs 1612 Date Thu Nov 7 17:05:27 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_46 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_46_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:106583 Length: 105 96.9 8.5E-06 5.3E-09 48.4 6.7 103 1-114 2-105 (105) 2 protein:vir:5976 Length: 102 # 96.7 8.3E-06 5.1E-09 48.4 5.8 93 1-108 6-102 (102) 3 protein:vir:106596 Length: 128 96.3 2.2E-05 1.3E-08 46.1 5.8 108 1-114 16-128 (128) 4 protein:vir:95071 Length: 104 96.0 7.4E-05 4.6E-08 43.2 7.3 94 1-113 6-104 (104) 5 protein:vir:1241 Length: 104 # 96.0 7.5E-05 4.7E-08 43.2 7.3 94 1-113 6-104 (104) 6 protein:vir:96128 Length: 98 # 96.0 7.4E-05 4.6E-08 43.2 7.2 88 1-108 6-98 (98) 7 protein:vir:94492 Length: 104 96.0 8.1E-05 5E-08 43.0 7.3 94 1-113 6-104 (104) 8 protein:vir:97430 Length: 104 96.0 8.1E-05 5E-08 43.0 7.3 94 1-113 6-104 (104) 9 protein:vir:93740 Length: 104 95.9 9E-05 5.6E-08 42.8 7.3 94 1-113 6-104 (104) 10 protein:vir:96831 Length: 98 # 95.6 0.00013 8E-08 41.9 6.8 88 1-108 6-98 (98) 11 protein:vir:3615 Length: 110 # 95.6 8.8E-05 5.5E-08 42.8 5.9 103 4-121 1-106 (110) 12 protein:vir:107119 Length: 104 95.5 0.00017 1.1E-07 41.2 7.3 95 1-118 6-104 (104) 13 protein:vir:105327 Length: 104 95.5 0.00017 1.1E-07 41.2 7.3 95 1-118 6-104 (104) 14 protein:vir:97329 Length: 104 95.3 0.00023 1.4E-07 40.5 7.3 95 1-118 6-104 (104) 15 protein:vir:94798 Length: 104 95.3 0.00024 1.5E-07 40.4 7.3 95 1-118 6-104 (104) 16 protein:vir:95891 Length: 104 95.1 0.00028 1.7E-07 40.0 7.3 95 1-118 6-104 (104) 17 protein:vir:96281 Length: 104 95.1 0.00028 1.7E-07 40.0 7.3 95 1-118 6-104 (104) 18 protein:vir:3970 Length: 110 # 94.7 0.00028 1.7E-07 40.1 6.2 103 4-121 1-106 (110) 19 protein:vir:99517 Length: 124 91.3 0.004 2.5E-06 33.7 7.3 111 1-121 3-122 (124) 20 protein:vir:741 Length: 110 # 91.1 0.0029 1.8E-06 34.5 6.3 105 4-121 1-106 (110) 21 protein:vir:96390 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 22 protein:vir:9311 Length: 110 # 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 23 protein:vir:103957 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 24 protein:vir:78849 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 25 protein:vir:97145 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 26 protein:vir:99796 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 27 protein:vir:96221 Length: 110 86.7 0.01 6.2E-06 31.5 6.0 105 4-114 1-110 (110) 28 protein:vir:94507 Length: 113 85.4 0.013 8E-06 31.0 6.0 108 1-114 1-113 (113) 29 protein:vir:96488 Length: 113 82.1 0.023 1.4E-05 29.6 5.8 104 1-114 1-113 (113) 30 protein:vir:95774 Length: 115 80.7 0.033 2E-05 28.7 6.2 106 1-114 1-115 (115) 31 protein:vir:9928 Length: 118 # 80.3 0.041 2.6E-05 28.2 6.6 113 1-121 1-116 (118) 32 protein:vir:9877 Length: 114 # 79.9 0.055 3.4E-05 27.5 7.2 105 3-121 1-112 (114) 33 protein:vir:105899 Length: 116 76.4 0.05 3.1E-05 27.7 5.8 102 1-114 7-116 (116) 34 protein:vir:94126 Length: 116 76.4 0.05 3.1E-05 27.7 5.8 102 1-114 7-116 (116) 35 protein:vir:2738 Length: 112 # 74.8 0.097 6E-05 26.1 7.0 102 1-114 1-112 (112) 36 protein:vir:1887 Length: 108 # 67.4 0.056 3.5E-05 27.4 4.0 100 1-121 6-108 (108) 37 protein:vir:192 Length: 108 # 67.4 0.056 3.5E-05 27.4 4.0 100 1-121 6-108 (108) 38 protein:vir:4857 Length: 104 # 66.1 0.053 3.3E-05 27.6 3.6 103 3-121 1-104 (104) 39 protein:vir:4904 Length: 113 # 64.7 0.3 0.00018 23.5 7.9 103 1-114 2-113 (113) 40 protein:vir:102158 Length: 99 55.5 0.094 5.8E-05 26.2 3.0 96 3-110 1-99 (99) 41 protein:vir:4458 Length: 107 # 52.2 0.11 6.8E-05 25.8 2.8 96 3-110 1-107 (107) 42 protein:vir:94761 Length: 132 50.8 0.6 0.00037 21.8 6.6 113 1-117 1-132 (132) 43 protein:vir:9761 Length: 140 # 50.1 0.51 0.00032 22.2 6.1 116 1-121 1-130 (140) 44 protein:vir:81159 Length: 95 # 45.0 0.21 0.00013 24.3 3.2 95 1-115 1-95 (95) 45 protein:vir:43 Length: 131 # N 38.8 0.89 0.00055 20.9 5.5 113 1-119 1-131 (131) 46 protein:vir:4954 Length: 104 # 37.7 0.47 0.00029 22.4 3.9 100 3-121 1-104 (104) 47 protein:vir:105005 Length: 96 37.5 0.42 0.00026 22.7 3.5 96 3-121 1-96 (96) 48 protein:vir:102083 Length: 96 37.5 0.42 0.00026 22.7 3.5 96 3-121 1-96 (96) 49 protein:vir:107614 Length: 96 37.5 0.42 0.00026 22.7 3.5 96 3-121 1-96 (96) 50 protein:vir:102863 Length: 96 37.5 0.42 0.00026 22.7 3.5 96 3-121 1-96 (96) 51 protein:vir:93592 Length: 108 33.0 1.1 0.00068 20.4 5.1 100 1-112 1-108 (108) 52 protein:vir:100103 Length: 120 33.0 1.1 0.00071 20.3 5.2 97 1-111 5-120 (120) 53 protein:vir:78068 Length: 178 29.5 0.34 0.00021 23.1 1.7 91 1-111 78-178 (178) 54 protein:vir:80967 Length: 131 27.5 1.1 0.00068 20.4 4.1 110 1-119 1-131 (131) 55 protein:vir:9576 Length: 131 # 26.2 2 0.0012 19.0 5.9 112 1-117 1-131 (131) 56 protein:vir:10365 Length: 115 25.9 0.65 0.00041 21.6 2.5 97 3-112 1-115 (115) 57 protein:vir:4512 Length: 107 # 24.6 2 0.0012 18.9 4.9 96 3-111 1-107 (107) 58 protein:vir:100245 Length: 113 21.2 0.94 0.00058 20.7 2.4 96 1-111 1-113 (113) 59 protein:vir:4831 Length: 105 # 20.9 1.3 0.00081 20.0 3.2 104 3-120 1-105 (105) 60 protein:vir:80389 Length: 172 20.3 2.8 0.0017 18.1 6.3 110 1-115 1-172 (172) 61 protein:vir:486 Length: 107 # 20.1 1.1 0.0007 20.3 2.6 95 3-111 1-107 (107) No 1 >protein:vir:106583 Length: 105 # NCBI annotation: putative protein # Family: family:all:6481 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958586;genbank:gi:41179246;genbank:GeneID:2717119 Probab=96.85 E-value=8.5e-06 Score=48.39 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=67.7 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhH-HHHHHHhhhhccccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEV-VAFRLITYHLSGEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeI-IA~rlV~yhl~~e~edvkSE 79 (121) |.- .-.-.--|.-.......||+++. ++|-=..+.+..||+.| +.|+.++. +..-.|.-|--...||..|+ T Consensus 2 ~~~-~~~~e~ik~L~~~~d~~~DelL~-~lieda~~~vl~y~nr~------~ip~~l~~~v~evav~~fNR~G~EG~tS~ 73 (105) T protein:vir:10 2 LNV-DQLTEIVSALSTRLENVNNALLT-ELVKESIAQVLDYTGQK------KLVGSMDIYVKKLAVINYNRLGIEGETQR 73 (105) T ss_pred Cch-HHHHHHHHHHhccCCCchhHHHH-HHHHHHHHHHHHHcCCc------ccchhHHHHHHHHHHHHhcccCCccccee Confidence 100 00001111122223467888888 55666678888999975 89999994 44455667777777999999 Q ss_pred cccceeeeeCccccchHHHHHHHHHhhcCcceeee Q lcl|NC_019912. 80 QMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIR 114 (121) Q Consensus 80 ~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvrir 114 (121) +.|..|+||.+ ++|+.+.++|.+ -|-..|+-- T Consensus 74 SegGvS~sy~~--~~~~~~~~~l~~-yR~~~v~~~ 105 (105) T protein:vir:10 74 SEGGITNYLET--GIPKDIRQGLNS-YRIAKVKKL 105 (105) T ss_pred ecCCeeeeeec--cCcHHHHHHHHH-HhhhcccCC Confidence 99999999965 699999999963 333322211 No 2 >protein:vir:5976 Length: 102 # NCBI annotation: hypothetical protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690676;genbank:geneid:6329129;genbank:gi:22855070;uniprot:Q38584;genbank:GeneID:955305 Probab=96.73 E-value=8.3e-06 Score=48.45 Aligned_cols=93 Identities=19% Similarity=0.421 Sum_probs=67.6 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhcccccc-ccccC-CCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFE-AEGRE-FPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfe-aeg~e-fP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||++..+ +.--+++|+.+ ||..-+|+..|+-|+|+ ..|++ +|..-.+.---++.|++-+ ....| T Consensus 6 VK~ll~i~----------~~s~d~~i~~l-ip~y~e~aedyCN~~F~dkdg~~~lP~gVkkfvAe~ik~y~~~--~niss 72 (102) T protein:vir:59 6 VKRLLSIT----------NDKHDEYLTEM-VPLLVEFAKDECHNPFIDKDGNESIPSGVLIFVAKAAQFYMTN--AGLTG 72 (102) T ss_pred hhhhhcCC----------CCccHHHHHHH-HHHHHHHHHHHhCCccccccccccCCccHHHHHHHHHHhcCCC--CCccc Confidence 55554322 12357889955 99999999999999999 45554 7887773333456666554 77999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRT 108 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRt 108 (121) ++||.-|.||.. .-|+++.+-|+ |||-- T Consensus 73 RsMgtVSYty~T--~iP~~i~~~L~PyRrl~~ 102 (102) T protein:vir:59 73 RSMDTVSYNFAT--EIPSTILKKLNPYRKMAR 102 (102) T ss_pred ccccceeeechh--hhhHHHHHHhhHHHhhcC Confidence 999999999987 68999998886 23321 No 3 >protein:vir:106596 Length: 128 # NCBI annotation: ORF042 # Family: family:all:372 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239495;genbank:gi:66395254;genbank:GeneID:4555750 Probab=96.32 E-value=2.2e-05 Score=46.15 Aligned_cols=108 Identities=9% Similarity=0.050 Sum_probs=73.4 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHH-Hhhhhccccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRL-ITYHLSGEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rl-V~yhl~~e~edvkSE 79 (121) -.|.++.++.-....- -...|+++++ ++|-=....|.-|+|.+.+ ++|+.++.|+..+ |.-+---..||.+|+ T Consensus 16 ~~~m~~Le~vK~~LgI-~d~~~D~lL~-~lI~~a~~~i~~~l~~~~~----~iP~~L~~Iv~evaVkryNR~g~EG~~S~ 89 (128) T protein:vir:10 16 GEVMNYLDDVKSRIGL-NDNEQDKQLN-SIINNVAAELLSRLPVDTI----SIPDKLQFIVVEVSTKRYNRIGAEGMSTD 89 (128) T ss_pred HHHHHHHHHHHHHhCC-CCcchhhHHH-HHHHHHHHHHHHHcCCChh----hhhhhHHHHHHHHHHHHhcccCccCccee Confidence 2345555554332221 2457888888 7788888899999997644 7999999555544 444545667889999 Q ss_pred cccceeeeeC--ccccchHHHHHHHHHhhcC--cceeee Q lcl|NC_019912. 80 QMGSYRVQYG--PEGIYPKTLLTGLSRRMRT--PSVRIR 114 (121) Q Consensus 80 ~lGsy~VtY~--deg~YPk~llkGL~~RlRt--psvrir 114 (121) +-|.+|+||. |-..|...|-+-++.+-.+ +.||.- T Consensus 90 SeeG~S~tf~dnd~~~Y~~~L~~y~~~~~~~~kG~v~F~ 128 (128) T protein:vir:10 90 SQDGRSNTFERNDFEEYQSIIDALYPKLDSSERGSVNFY 128 (128) T ss_pred eeCceeeeeccCCcchhHHHHHHHHhhccCCCCCceeeC Confidence 9999999995 6788988888777653221 223332 No 4 >protein:vir:95071 Length: 104 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240825;genbank:gi:66394717;genbank:GeneID:5133865 Probab=96.03 E-value=7.4e-05 Score=43.24 Aligned_cols=94 Identities=22% Similarity=0.367 Sum_probs=67.9 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ .+.+|..-. .||. ++-| +...... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~--~~~lP~gVkkfvAe-~iky---~~~~Nis 68 (104) T protein:vir:95 6 VKMINGLSLND----------SSNDEQIE-YLIEEYKSVAEDYCNQKFD--DKEVPSGVKKFIAE-CIKF---GTTGNIS 68 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHHhCCCCC--CccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3333 22221 12467788 7899999999999999994 567999988 5565 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcCcceee Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRI 113 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvri 113 (121) |++||.-|.||.. +-|+++.+-|+ ||||=-.--+ T Consensus 69 sRsMgtVSYTy~T--~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:95 69 ARTMGTVSYTYVT--DIPSSAYAYLMPYRKLSWGKRYV 104 (104) T ss_pred cccccceeeechh--hhhHHHHHhhhhhhhhcccccCC Confidence 9999999999987 68999999997 5665432222 No 5 >protein:vir:1241 Length: 104 # NCBI annotation: similar to phage Spp1 gp15 (product required for head morphogenesis) # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510940;genbank:gi:17426274;genbank:GeneID:927373 Probab=96.01 E-value=7.5e-05 Score=43.19 Aligned_cols=94 Identities=22% Similarity=0.365 Sum_probs=67.9 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ .+.+|..-. .||. ++-| +...... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~--~~~lP~gVkkfvAe-~iky---~~~~Nis 68 (104) T protein:vir:12 6 VKMINGLSLND----------SSDDEQIE-YLIEEYKSVAEDYCNQKFD--DKEVPSGVKKFIAE-CIKF---GTTGNIS 68 (104) T ss_pred HHHHhCCCCCC----------CccHHHHH-HHHHHHHHHHHHHhCCCCC--CccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3333 22221 12467788 7899999999999999994 567999988 5565 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcCcceee Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRI 113 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvri 113 (121) |++||.-|.||.. +-|+++.+-|+ ||||=-.--+ T Consensus 69 sRsMgtVSYTy~T--~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:12 69 ARTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred cccccceeeechh--hhhHHHHHhhhhhhhhcccccCC Confidence 9999999999987 68999999997 5665432222 No 6 >protein:vir:96128 Length: 98 # NCBI annotation: ORF050 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240080;genbank:gi:66395776;genbank:GeneID:5133109 Probab=96.01 E-value=7.4e-05 Score=43.22 Aligned_cols=88 Identities=24% Similarity=0.377 Sum_probs=66.6 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ +..+ +.-.+++|+ .+||..-+|+..|+-++|+ ..+|..-. .||. ++.| +...... T Consensus 6 VK~ln~~~i~----------~~~~d~~~~-~li~~y~e~aedyCN~~F~---k~lP~gVkkfiAe-~iky---~~~~nis 67 (98) T protein:vir:96 6 VKQLNLMPIE----------DTSNDDVLG-DLIKFYKGIAEEYCNKTFE---APYPFGVRKFIAE-CIKY---GTNSNVS 67 (98) T ss_pred hHHhhcccCC----------CcchHHHHH-HHHHHHHHHHHHHhCCccc---ccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3444 1111 112478888 7899999999999999998 44998888 5555 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcC Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRT 108 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRt 108 (121) |++||.-|.||.. +-|+++.+-|+ ||||= T Consensus 68 sRsMgtVSYty~T--~iP~~i~~~L~PyRrlrw 98 (98) T protein:vir:96 68 SRTMGTVSYTFVT--DLPKATYRHLKPFRRLRW 98 (98) T ss_pred cccccceeeechh--hhhHHHHHHhhhhhhccC Confidence 9999999999987 68999999997 56766 No 7 >protein:vir:94492 Length: 104 # NCBI annotation: ORF049 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240678;genbank:gi:66396380;genbank:GeneID:5133756 Probab=95.98 E-value=8.1e-05 Score=43.03 Aligned_cols=94 Identities=22% Similarity=0.361 Sum_probs=67.9 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ .+.+|..-. .||. ++-| +...... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~--~~~lP~gVkkfvAe-~iky---~~~~Nis 68 (104) T protein:vir:94 6 VKMINGLSLND----------SSNDEQIE-YLIEEYKGVAEDYCNQKFD--DKEVPSGVKKFIAE-CIKF---GTTGNIS 68 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHHhCCCCC--CccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3333 22221 12467788 7899999999999999994 567999988 5565 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcCcceee Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRI 113 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvri 113 (121) |++||.-|.||.. +-|+++.+-|+ ||||=-.--+ T Consensus 69 sRsMgtVSYTy~T--~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:94 69 ARTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred cccccceeeechh--hhhHHHHHhhhhhhhhcccccCC Confidence 9999999999987 68999999997 5665432222 No 8 >protein:vir:97430 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240751;genbank:gi:66396455;genbank:GeneID:5133786 Probab=95.98 E-value=8.1e-05 Score=43.03 Aligned_cols=94 Identities=22% Similarity=0.361 Sum_probs=67.9 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ .+.+|..-. .||. ++-| +...... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~--~~~lP~gVkkfvAe-~iky---~~~~Nis 68 (104) T protein:vir:97 6 VKMINGLSLND----------SSNDEQIE-YLIEEYKGVAEDYCNQKFD--DKEVPSGVKKFIAE-CIKF---GTTGNIS 68 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHHhCCCCC--CccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3333 22221 12467788 7899999999999999994 567999988 5565 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcCcceee Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRI 113 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvri 113 (121) |++||.-|.||.. +-|+++.+-|+ ||||=-.--+ T Consensus 69 sRsMgtVSYTy~T--~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:97 69 ARTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred cccccceeeechh--hhhHHHHHhhhhhhhhcccccCC Confidence 9999999999987 68999999997 5665432222 No 9 >protein:vir:93740 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240461;genbank:gi:66396159;genbank:GeneID:5133509 Probab=95.92 E-value=9e-05 Score=42.77 Aligned_cols=94 Identities=21% Similarity=0.361 Sum_probs=67.7 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ .+.+|..-. .||. ++-| +...... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~--~~~lP~gVkkfvAe-~iky---~~~~Nis 68 (104) T protein:vir:93 6 VKMINGLSLND----------SSNDEQID-YLIEEYKSVAEDYCNQKFD--DKEVPSGVKKFIAE-CIKF---GTTGNIS 68 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHHhCCCCC--CccCCccHHHHHHH-HHhh---CCCCCcc Confidence 3333 22221 12466777 7899999999999999994 567999988 5565 4555 4556899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcCcceee Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRI 113 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvri 113 (121) |++||.-|.||.. +-|+++.+-|+ ||||=-.--+ T Consensus 69 sRsMgtVSYTy~T--~iP~~i~~~L~PYRrlrw~~~~~ 104 (104) T protein:vir:93 69 ARTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWGKRYV 104 (104) T ss_pred cccccceeeechh--hhhHHHHHhhhhhhhhcccccCC Confidence 9999999999987 68999999997 5665432222 No 10 >protein:vir:96831 Length: 98 # NCBI annotation: ORF052 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240159;genbank:gi:66395852;genbank:GeneID:5133172 Probab=95.57 E-value=0.00013 Score=41.90 Aligned_cols=88 Identities=24% Similarity=0.379 Sum_probs=65.6 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchh-HHHHHHHhhhhccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYE-VVAFRLITYHLSGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~Ye-IIA~rlV~yhl~~e~edvk 77 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|+-++|+ ..+|..-. .||. ++.|-+ ..... T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCN~~F~---~~lP~gVkkfvAe-~iky~~---~~nis 67 (98) T protein:vir:96 6 VKMLNGTRIDD----------VSNDDVIN-KLILAYKQVAEEYCNQVFG---DPLPGGVKKFIAE-CIKYGV---SGNIA 67 (98) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHHhCCccc---ccCCccHHHHHHH-HHhhcc---cCCcc Confidence 3333 22221 12467788 7899999999999999998 35898888 5555 555633 35899 Q ss_pred hhcccceeeeeCccccchHHHHHHHH--HhhcC Q lcl|NC_019912. 78 SEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRT 108 (121) Q Consensus 78 SE~lGsy~VtY~deg~YPk~llkGL~--~RlRt 108 (121) |++||.-|.||.. +-|+++.+-|+ ||||= T Consensus 68 sRsMgtVSYty~T--~iP~~i~~~L~PyRrlrw 98 (98) T protein:vir:96 68 SRSMGTVSYTYVT--DVPSSMYKYLKPYRKLRW 98 (98) T ss_pred cccccceeeechh--hhhHHHHHHhhhhhhccC Confidence 9999999999987 68999999997 56766 No 11 >protein:vir:3615 Length: 110 # NCBI annotation: ORF38 # Family: family:all:372 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112701;genbank:gi:13786569;genbank:GeneID:921067 Probab=95.56 E-value=8.8e-05 Score=42.82 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=67.3 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHH-HHHhhhhccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAF-RLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~-rlV~yhl~~e~edvkSE~lG 82 (121) .++.++.-.-+.- -|++++. ++|--..+.|.-|+|.|.+ ++|+.++.|+. ..|.-|---..||.+|++-| T Consensus 1 M~~L~~vK~~lg~----~~D~lL~-~li~~a~~~i~~~~~~~~~----eiP~~l~~iv~evav~ryNR~g~EG~~S~See 71 (110) T protein:vir:36 1 MAITDDLKMLLGG----SLDERLE-VIEKRTRDRLLLILGSDIK----EVPPELEYVVLDVSLKRFNRIGQEGMQSYSQE 71 (110) T ss_pred ChhHHHHHhhcCC----ChhHHHH-HHHHHHHHHHHHHhCCChh----hhhhHHHHHHHHHHHHHhccccccccceeecC Confidence 3444444333321 2788887 7788888999999998753 69999994444 44555555567889999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ..|++|. |-..|...|-+-++.+ ..++.+--|| T Consensus 72 G~S~sf~~~d~~~y~~~l~~y~~~~------~~~~~~~~g~ 106 (110) T protein:vir:36 72 GLSMTFSESDFDEYADEIESWRKSR------ETEGDKKIGR 106 (110) T ss_pred CceeeecccCcchHHHHHHHHHhhh------ccccCCccee Confidence 9999996 4457777666654322 1222222333 No 12 >protein:vir:107119 Length: 104 # NCBI annotation: conserved phage protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950608;genbank:gi:119953688;genbank:GeneID:4643128 Probab=95.50 E-value=0.00017 Score=41.18 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=67.7 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--||+|+ .+||..-+|+..|+-++|+. ..+|..-++.--.++-| +......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gV~~fvA~~iky---~~~~Niss 69 (104) T protein:vir:10 6 VKLLNNLSLDD----------TSNDETIE-LLIEKYLNVAEEYCNQTFNR--KSLPSNVEKFIANCIKQ---GTTSNISS 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhh---cCCCCccc Confidence 3333 22221 12467788 78999999999999999964 48999988554556666 45568999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSyTy~t--~iP~~i~~~L~PYRklr~~-----~~~~ 104 (104) T protein:vir:10 70 RTMGTVSYTFVT--DLPKETYGYLKPFRRLRWT-----GYHV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----cccC Confidence 999999999875 78999999997 455432 2222 No 13 >protein:vir:105327 Length: 104 # NCBI annotation: putative head morphogenesis protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950671;genbank:gi:119967841;genbank:GeneID:4643206 Probab=95.50 E-value=0.00017 Score=41.18 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=67.7 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--||+|+ .+||..-+|+..|+-++|+. ..+|..-++.--.++-| +......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gV~~fvA~~iky---~~~~Niss 69 (104) T protein:vir:10 6 VKLLNNLSLDD----------TSNDETIE-LLIEKYLNVAEEYCNQTFNR--KSLPSNVEKFIANCIKQ---GTTSNISS 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhh---cCCCCccc Confidence 3333 22221 12467788 78999999999999999964 48999988554556666 45568999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSyTy~t--~iP~~i~~~L~PYRklr~~-----~~~~ 104 (104) T protein:vir:10 70 RTMGTVSYTFVT--DLPKETYGYLKPFRRLRWT-----GYHV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----cccC Confidence 999999999875 78999999997 455432 2222 No 14 >protein:vir:97329 Length: 104 # NCBI annotation: ORF048 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240613;genbank:gi:66396311;genbank:GeneID:5133685 Probab=95.28 E-value=0.00023 Score=40.52 Aligned_cols=95 Identities=20% Similarity=0.302 Sum_probs=67.5 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--|++|+ .+||..-+|+..|.-++|++ ..+|..-++.--.++-|- ......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gV~~fvA~~iky~---~~~Niss 69 (104) T protein:vir:97 6 VKMINGLSLND----------SSNDEQIE-YLIEEYKSVAEDYCNQKFDD--KAVPSGVKKFIAECIKFG---TTGNISA 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhhC---CCCCccc Confidence 3333 22221 12467788 78999999999999999964 489999885545566663 4558999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSYty~t--~iP~~i~~~LkPYRklr~~-----~~~~ 104 (104) T protein:vir:97 70 RTMGTVSYTYVT--DIPSSAYAYLMPYRKLSWG-----KRYV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----ccCC Confidence 999999989875 78999999997 455532 2222 No 15 >protein:vir:94798 Length: 104 # NCBI annotation: ORF043 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240538;genbank:gi:66396233;genbank:GeneID:5133578 Probab=95.26 E-value=0.00024 Score=40.43 Aligned_cols=95 Identities=20% Similarity=0.298 Sum_probs=67.5 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--||+|+ .+||..-+|+..|.-++|++ ..+|..-++.--.++-|- ......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gVk~fvA~~iky~---~~~Niss 69 (104) T protein:vir:94 6 VKMINGLSLND----------SSNDEQIE-YLIEEYKSVAEDYCNQKFDD--KAVPSGVKKFIAECIKFG---TTGNISA 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhhC---CCCCccc Confidence 3333 22221 12467788 78999999999999999964 489999885545566663 4558999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSYTy~T--~iP~~i~~~LkPYRklr~~-----~~~~ 104 (104) T protein:vir:94 70 RTMGTVSYTYIT--DIPSSAYAYLMPYRKLSWG-----KRYV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----ccCC Confidence 999999999875 78999999997 455532 2222 No 16 >protein:vir:95891 Length: 104 # NCBI annotation: ORF051 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240387;genbank:gi:66396087;genbank:GeneID:5133402 Probab=95.11 E-value=0.00028 Score=40.04 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=67.4 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--||+|+ .+||..-+|+..|.-++|++ ..+|..-++.--.++-|- ......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gV~~fvA~~iky~---~~~Niss 69 (104) T protein:vir:95 6 VKMINGLSLND----------SSNDEQIK-YLIEEYKSVAEDYCNQKFDD--KAVPSGVKKFIAECIKFG---TTGNISA 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhhC---CCCCccc Confidence 3333 22221 12467787 78999999999999999964 489999885545566663 4558999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSYTy~t--~iP~~i~~~LkPYRklr~~-----~~~~ 104 (104) T protein:vir:95 70 RTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWG-----KRYV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----ccCC Confidence 999999999875 78999999997 455532 2222 No 17 >protein:vir:96281 Length: 104 # NCBI annotation: ORF047 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240313;genbank:gi:66396008;genbank:GeneID:5133358 Probab=95.11 E-value=0.00028 Score=40.04 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=67.4 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchh Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkS 78 (121) .||+ ++.|. .--||+|+ .+||..-+|+..|.-++|++ ..+|..-++.--.++-|- ......| T Consensus 6 VK~l~~~~~~d----------~~~D~~~~-~li~~y~e~aedyCn~~F~~--~~lP~gV~~fvA~~iky~---~~~Niss 69 (104) T protein:vir:96 6 VKMINGLSLND----------SSNDEQIK-YLIEEYKSVAEDYCNQKFDD--KAVPSGVKKFIAECIKFG---TTGNISA 69 (104) T ss_pred HHHHhCCCCCC----------cccHHHHH-HHHHHHHHHHHHhcCCCCCC--CCCCccHHHHHHHHHhhC---CCCCccc Confidence 3333 22221 12467787 78999999999999999964 489999885545566663 4558999 Q ss_pred hcccceeeeeCccccchHHHHHHHH--HhhcCcceeeeccCC Q lcl|NC_019912. 79 EQMGSYRVQYGPEGIYPKTLLTGLS--RRMRTPSVRIRGRRP 118 (121) Q Consensus 79 E~lGsy~VtY~deg~YPk~llkGL~--~RlRtpsvrirgrrp 118 (121) ++||.-|.||.. .-|+++++-|+ ||||=- |+-- T Consensus 70 RSMGtVSYTy~t--~iP~~i~~~LkPYRklr~~-----~~~~ 104 (104) T protein:vir:96 70 RTMGTVSYTYVT--DIPSSAYAYLLPYRKLSWG-----KRYV 104 (104) T ss_pred ccccceeecccc--hhHHHHHHhhhhhhhhccc-----ccCC Confidence 999999999875 78999999997 455532 2222 No 18 >protein:vir:3970 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663678;genbank:gi:21716115;genbank:GeneID:951203 Probab=94.71 E-value=0.00028 Score=40.05 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=65.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHH-HHhhhhccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFR-LITYHLSGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~r-lV~yhl~~e~edvkSE~lG 82 (121) .++.++.-..+.- -||++++ ++|--..+.|.-|+|-+-+ ++|+.++.|+.. .|.-|--...||.+|++-| T Consensus 1 M~iL~~vK~~lgi----~~D~lL~-~li~~a~~~i~~~l~~~~~----~iP~~l~~iv~evav~ryNR~g~EG~~S~See 71 (110) T protein:vir:39 1 MAITDDLKKLLGG----SSDERLE-VIEKRTRERLLLILSSNIK----EVPPELEYVVLDVSLKRFNRIGQEGMQSYSQE 71 (110) T ss_pred CchHHHHHHhcCC----ChhHHHH-HHHHHHHHHHHHHhCCChh----hhhhHHHHHHHHHHHHHhccccccccceeecC Confidence 3444544433332 2788888 7888888999999996543 699999955544 4555555566789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ..|++|. |-..|...|-+=+.. -.-+|..--|+ T Consensus 72 G~S~sf~~~d~~~y~~~l~~y~~~------~~~~~~~~~g~ 106 (110) T protein:vir:39 72 GLSMTFSESDFDEYADEIESWRKS------KETEGDKKIGR 106 (110) T ss_pred CeeeeecccCcchhHHHHHHHhhh------ccccccCccee Confidence 9999996 445666555433221 12223333344 No 19 >protein:vir:99517 Length: 124 # NCBI annotation: putative protein # Family: family:all:372 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958539;genbank:gi:41179321;genbank:GeneID:2717155 Probab=91.30 E-value=0.004 Score=33.74 Aligned_cols=111 Identities=9% Similarity=0.115 Sum_probs=67.3 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhc-cccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLS-GEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~-~e~edvkSE 79 (121) --|-++.++.-....- -...|+++++ ++|-=....|.-|+|.+ ..+|..++.|+..|+--+.- --.||.+|+ T Consensus 3 ~~~~~~Le~vK~~LgI-~d~~~D~lL~-~lI~~a~~~i~~~l~~~-----e~iP~~L~~Iv~evavkryNR~g~EG~~S~ 75 (124) T protein:vir:99 3 DVLDDQLKKLKTALQL-TDTKHDDLLK-LYLEDATDFLKLRLSIT-----GVIPTEMLAIVRGAAVKKFNRFKNEGMASY 75 (124) T ss_pred cchHHHHHHHHHHhCC-CCcchhHHHH-HHHHHHHHHHHHhcCCc-----ccchhHHHHHHHHHHHHHhcccCCccccee Confidence 1223344443222211 1467888888 77888889999999975 24999999666666544433 345789999 Q ss_pred cccceeeeeCccccchHHHHHHHHHhhcCccee-eec-------cCCCCC Q lcl|NC_019912. 80 QMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVR-IRG-------RRPEGR 121 (121) Q Consensus 80 ~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvr-irg-------rrpegr 121 (121) +-+..|+||.+ .+|+.....|.+ .|-+.-+ =+| -|..|| T Consensus 76 SeeG~S~sf~d--~d~~~y~~~L~~-y~~~~~~~g~~~fi~~~~~~~~~~ 122 (124) T protein:vir:99 76 SQDGESITFAS--SDFDEWEDEINQ-WRKDHTGMNKGMWVNPYEIRQNGR 122 (124) T ss_pred eeCceeeeecc--cChhhHHHHHHH-HhhccCcCCceeeecCccccCCCC Confidence 99999999975 466666666653 3322210 000 022333 No 20 >protein:vir:741 Length: 110 # NCBI annotation: unknown # Family: family:all:372 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108718;genbank:gi:13487840;genbank:GeneID:920873 Probab=91.13 E-value=0.0029 Score=34.48 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=68.7 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhcc-ccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSG-EGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~-e~edvkSE~lG 82 (121) .++.++.-.-+.- -|+++++ ++|--..+.|.-|+|.+.+ ++|+.++.|+..|+-.+... -.||..|++-| T Consensus 1 M~~L~~vK~~lgi----~~D~lL~-~li~~a~~~i~~~l~~~~~----~iP~~l~~iv~evav~ryNR~g~EG~~S~See 71 (110) T protein:vir:74 1 MAITYEIKKLLGG----SSDERLE-IIEKRTRERLLLILGSDLK----EVPPELEYVVLDVSLKRFNRIGQEGMQSYSQE 71 (110) T ss_pred ChHHHHHHHHcCC----ChhHHHH-HHHHHHHHHHHHHhCCChh----hhhHHHHHHHHHHHHHHhcccCccccceeecC Confidence 3444444333332 1678877 7777888899999996553 79999997777766655544 34679999999 Q ss_pred ceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ..|++|.+ .+|+.....|.+-. - .-.-++.+--|+ T Consensus 72 G~S~sf~~--~d~~~y~~~l~~y~-~-~~~~~~~~~~~~ 106 (110) T protein:vir:74 72 GLSMTFSE--SDFDEYADEIESRR-K-SKETEGDKKIGR 106 (110) T ss_pred Ceeeeecc--cchhhHHHHHHHHH-h-hccccccCccee Confidence 99999975 46888888887732 1 111122222233 No 21 >protein:vir:96390 Length: 110 # NCBI annotation: ORF048 # Family: family:all:372 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239650;genbank:gi:66395410;genbank:GeneID:5132866 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:96 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:96 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 22 >protein:vir:9311 Length: 110 # NCBI annotation: phi Mu50B-like protein # Family: family:all:372 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803289;genbank:gi:29028599;genbank:GeneID:1258047 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:93 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:93 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 23 >protein:vir:103957 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873994;genbank:gi:118430769;genbank:GeneID:4525451 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:10 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:10 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 24 >protein:vir:78849 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285363;genbank:gi:148717891;genbank:GeneID:5246980 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:78 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:78 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 25 >protein:vir:97145 Length: 110 # NCBI annotation: ORF049 # Family: family:all:372 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239728;genbank:gi:66394913;genbank:GeneID:5130878 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:97 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:97 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 26 >protein:vir:99796 Length: 110 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004309;genbank:gi:122891763;genbank:GeneID:4712351 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:99 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:99 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 27 >protein:vir:96221 Length: 110 # NCBI annotation: ORF044 # Family: family:all:372 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239573;genbank:gi:66395333;genbank:GeneID:5132767 Probab=86.68 E-value=0.01 Score=31.53 Aligned_cols=105 Identities=12% Similarity=0.137 Sum_probs=64.6 Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhhccc Q lcl|NC_019912. 4 ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSEQMG 82 (121) Q Consensus 4 ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE~lG 82 (121) .++.++.-....-. ...|+++++ ++|--....|.-|.|..- .++|+.++.|+..++-.+. ---.||.+|++-+ T Consensus 1 M~~L~~vK~~lgI~-d~~~D~lL~-~ii~~a~~~i~~~l~~~~----~~iP~~l~~iv~ev~vkryNR~g~EG~~S~S~e 74 (110) T protein:vir:96 1 MTTLADVKKRIGLK-DEKQDEQLE-EIIKSCESQLLSMLPIEV----EQIPERFSYMIKEVAVKRYNRIGAEGMTSEAVD 74 (110) T ss_pred CchHHHHHHHhCCC-CCchhHHHH-HHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcccCccccceeecC Confidence 34444433222211 356788888 677778888888888332 3699999977777766655 3455789999999 Q ss_pred ceeeeeC--ccccchHHHHHHHHHhh--cCcceeee Q lcl|NC_019912. 83 SYRVQYG--PEGIYPKTLLTGLSRRM--RTPSVRIR 114 (121) Q Consensus 83 sy~VtY~--deg~YPk~llkGL~~Rl--Rtpsvrir 114 (121) ..|+||. +-..|-..|-+-+..+- +-..||.- T Consensus 75 G~S~sf~d~d~~~y~~~l~~y~~~~~~~~kG~v~Fl 110 (110) T protein:vir:96 75 GRSNAYELNDFKEYEAIIDNYFNARTRTKKGRAVFF 110 (110) T ss_pred ceeeeecccccchHHHHHHHHHhhcCCCCCceeeeC Confidence 9999996 44556555544433221 11112222 No 28 >protein:vir:94507 Length: 113 # NCBI annotation: putative DNA packaging protein # Family: family:all:372 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223891;genbank:gi:62327103;genbank:GeneID:5075523 Probab=85.43 E-value=0.013 Score=30.95 Aligned_cols=108 Identities=14% Similarity=0.102 Sum_probs=68.3 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkSE 79 (121) |.++. +.-....- -...|+++++ ++|--.+..|.-|.|.|=. .-.++|+.++.|...++-.+. -.-.||.+|+ T Consensus 1 M~~L~---~vK~~lgi-~d~~~D~lL~-~iI~~a~~~i~~~l~~~~~-~~~~iP~~l~~Iv~evavkryNR~g~EG~~S~ 74 (113) T protein:vir:94 1 MALLD---SIKLRIGI-EDTKQDDLLT-DIISDVQARVLAYVNQDGL-VQSELPNGLDFVIKDVTIRIYNKIGDEGKESS 74 (113) T ss_pred CchHH---HHHHHhCC-CCCchhhHHH-HHHHHHHHHHHHHhCCccc-hhhhhhhHHHHHHHHHHHHHhcccCCccceee Confidence 44433 22211111 2467899988 7788889999999997521 124799999966655544443 3456789999 Q ss_pred cccceeeeeCc---cccchHHHHHHHHHh-hcCcceeee Q lcl|NC_019912. 80 QMGSYRVQYGP---EGIYPKTLLTGLSRR-MRTPSVRIR 114 (121) Q Consensus 80 ~lGsy~VtY~d---eg~YPk~llkGL~~R-lRtpsvrir 114 (121) +-+..|+||.+ -..|-..|-+-+..+ =+.+++|.- T Consensus 75 SeeG~S~sf~~~~df~~y~~~l~~~~~~~~~~~~g~rF~ 113 (113) T protein:vir:94 75 SEGNVSNTWDTPADLSEYSDVLDVYRKSYKRRSAGMRFI 113 (113) T ss_pred ecCceeeeecCccchhhHHHHHHHHHhhccCCCCCceeC Confidence 99999999954 366766665544432 233444443 No 29 >protein:vir:96488 Length: 113 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238494;genbank:gi:66391770;genbank:GeneID:5176910 Probab=82.06 E-value=0.023 Score=29.59 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=60.0 Q ss_pred Cccchhhhhhh--hhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhh-hhccccccch Q lcl|NC_019912. 1 MKMITTFDRYA--KSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITY-HLSGEGADVV 77 (121) Q Consensus 1 mkmittfdrya--kstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~y-hl~~e~edvk 77 (121) |- +.+-.- ..-.+.-...|+++++ ++|--+.+.|.-|+|.+ +.|..++.|...++-- |--.-.||.+ T Consensus 1 M~---~L~~~K~l~~ik~~~~~~~D~lL~-~ii~~a~~~i~~~l~~~------~iP~~L~~Iv~evavkryNR~g~EG~~ 70 (113) T protein:vir:96 1 MM---ALDKDKVIKNVSVDLNTDDDVLLK-ILLERVVNHFKSEYGVE------EIDDKLAFIFEDCVIKRFNRRGAEGAK 70 (113) T ss_pred Cc---hhHHHHHHhcCCCCCCCchhHHHH-HHHHHHHHHHHHHhccc------ccchhHHHHHHHHHHHHhcCCCccccc Confidence 21 222110 0111111235788888 77888888999999964 8999999555555433 3344668899 Q ss_pred hhcccceeeeeCc--cccch-HHHHHHHHH---hhcCcceeee Q lcl|NC_019912. 78 SEQMGSYRVQYGP--EGIYP-KTLLTGLSR---RMRTPSVRIR 114 (121) Q Consensus 78 SE~lGsy~VtY~d--eg~YP-k~llkGL~~---RlRtpsvrir 114 (121) |++-+.+|++|.+ ..--| ..++.-.+. ..+.+.||.- T Consensus 71 S~S~eG~S~sf~d~~~df~eY~~~l~~~~~~~~~~~~G~v~Fl 113 (113) T protein:vir:96 71 SESVDGHSMSYYDNENEFKPYDDMLQRLYGTSGQSKEGEVLFL 113 (113) T ss_pred eeccCceeeeecccccccchhHHHHHHHHhhcCCCCCceeeeC Confidence 9999999999954 22222 333333321 2233444444 No 30 >protein:vir:95774 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950592;genbank:gi:119953787;genbank:GeneID:5076844 Probab=80.69 E-value=0.033 Score=28.74 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=65.2 Q ss_pred Cccchhhhhhhhhhh-HHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHH-HHhhhhccccccchh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQ-KEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFR-LITYHLSGEGADVVS 78 (121) Q Consensus 1 mkmittfdryakstq-keytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~r-lV~yhl~~e~edvkS 78 (121) |..- +.++.-.-.. +.-...|+++++ ++|-=+..-|.-|.|.+ ++|+..+.|+.. .|.-|--...||.+| T Consensus 1 md~~-~L~~vK~~LgI~~~D~~~D~lL~-~ii~~a~~~i~~~l~~~------~iP~~L~~Iv~ev~vkryNR~g~EG~~S 72 (115) T protein:vir:95 1 MDTT-QLEKIKRRLGIPADDDKEDKLLE-DLVEDAETYFKLLTSSA------VVDSKYHFMIEAVVYKLYGRKGSEGVTS 72 (115) T ss_pred Cchh-HHHHHHHHhCCCCCCchhhHHHH-HHHHHHHHHHHHhcCch------hcchhHHHHHHHHHHHHhcCCCccccce Confidence 3321 2444322211 112356888888 77888889999999974 799999955544 444444567788999 Q ss_pred hcccceeeeeCc----cccchHHHHHHHHHhhcC---cceeee Q lcl|NC_019912. 79 EQMGSYRVQYGP----EGIYPKTLLTGLSRRMRT---PSVRIR 114 (121) Q Consensus 79 E~lGsy~VtY~d----eg~YPk~llkGL~~RlRt---psvrir 114 (121) ++-+..|++|.+ -..|=.-|-+-+..+-++ ..||.- T Consensus 73 ~S~eG~S~tf~~nD~~f~eY~~~l~~~~~~~~~~~~~G~v~Fl 115 (115) T protein:vir:95 73 ETVDGYSVTYQEWDNLFKPYMAILNKDFGLDGSVREKGKVMFL 115 (115) T ss_pred eecCceeeeccccccccchhHHHHHHHHhccCCccCCcceeeC Confidence 999999999953 344544444433323222 244444 No 31 >protein:vir:9928 Length: 118 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795690;genbank:gi:28876458;genbank:GeneID:1258013 Probab=80.27 E-value=0.041 Score=28.17 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=66.3 Q ss_pred Cccchhhhhhhhhhh-HHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccchh Q lcl|NC_019912. 1 MKMITTFDRYAKSTQ-KEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVVS 78 (121) Q Consensus 1 mkmittfdryakstq-keytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvkS 78 (121) |---+..++.-.-.. +.=...|+++++ ++|--+...|.-|.|.+-+...-+.|..++.|+..++-.+. ---.||.+| T Consensus 1 md~~~~L~~vK~~lgI~~~D~~~D~lL~-~~i~~a~~~i~~~l~~~~~~~~~eiP~~l~~iv~evav~ryNR~g~EG~~S 79 (118) T protein:vir:99 1 MGDKQLIDDIKLFIGISKGDGAQDELIT-LAIYESKERVLAKLNEYSETEITKIPDRLRFIVRDVAIKRFNRINSEGAVE 79 (118) T ss_pred CchhhHHHHHHHHhCCCCCchhhHHHHH-HHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHHHHHHhcCcCCcccce Confidence 433333443321111 011356899998 77888899999999976554556899999977766665555 344568999 Q ss_pred hcccceeeeeCc-cccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 79 EQMGSYRVQYGP-EGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 79 E~lGsy~VtY~d-eg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ++-+..|++|++ -..|-..|-.-+..+. . +| +-..| T Consensus 80 ~SeeG~S~sf~~d~~ey~~~l~~~~~~~~--~----~~-~g~v~ 116 (118) T protein:vir:99 80 DSEEGKTFKWDSYLKEYESTLRSAAIGKV--Y----SG-KGVAR 116 (118) T ss_pred eecCCeeeeeccCchhHHHHHHHHhhhcc--c----Cc-Cccee Confidence 999999999973 2223333332222111 0 01 11112 No 32 >protein:vir:9877 Length: 114 # NCBI annotation: hypothetical protein # Family: family:all:2716 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795639;genbank:gi:28876402;genbank:GeneID:1257933 Probab=79.91 E-value=0.055 Score=27.50 Aligned_cols=105 Identities=16% Similarity=0.122 Sum_probs=65.7 Q ss_pred cchh----hhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHH-hhhhccccccch Q lcl|NC_019912. 3 MITT----FDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLI-TYHLSGEGADVV 77 (121) Q Consensus 3 mitt----fdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV-~yhl~~e~edvk 77 (121) |--+ .++.--... .-..+|+++++ ++|-=...-|.-|.|. .++|...+.|+..++ .-+--.-.||.+ T Consensus 1 m~~~~~~~L~~vK~~Lg-i~d~~~D~lL~-~ii~~~~~~i~~~l~~------~~iP~~L~~Iv~ev~vkryNR~g~EG~~ 72 (114) T protein:vir:98 1 MDETKQAIIDRVRVRLA-DETSLKEELLE-ELTQTAIDRINLKVGD------VVFNPLFNSIAVDVVVKMYRRMYFEGID 72 (114) T ss_pred CchhHHHHHHHHHHHhC-CCCCchhhHHH-HHHHHHHHHHHHhhCc------cccchHHHHHHHHHHHHHhcccCccccc Confidence 2211 222211111 12467899998 6777788888889885 489999995555443 333344558999 Q ss_pred hhcccceeeeeC--ccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 78 SEQMGSYRVQYG--PEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 78 SE~lGsy~VtY~--deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) |++-+.+|+||. +-..|-..|-+=++.+.++-. |+ -+| T Consensus 73 S~S~eG~S~tf~dndf~ey~~~l~~y~~~~~~~~~----g~--~v~ 112 (114) T protein:vir:98 73 TEKADTISTKFIENVLAEYGEELASYKKDRLAILN----KK--VVR 112 (114) T ss_pred eeeccceeeeeeccccchhHHHHHHHHhhhhhhhc----Cc--eee Confidence 999999999996 445688877776665543321 11 123 No 33 >protein:vir:105899 Length: 116 # NCBI annotation: head completion protein # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004377;genbank:gi:122891832;genbank:GeneID:4712370 Probab=76.37 E-value=0.05 Score=27.74 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=62.6 Q ss_pred Cccch--hhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccc-cCCCCchh-HHHHHHHhhhhc-ccccc Q lcl|NC_019912. 1 MKMIT--TFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEG-REFPKSYE-VVAFRLITYHLS-GEGAD 75 (121) Q Consensus 1 mkmit--tfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg-~efP~~Ye-IIA~rlV~yhl~-~e~ed 75 (121) .|||. +.+- .|. .-+++|.- ..+|..-. ...|+-++|-..| .-+|..-+ .||. .+.|+|- ++... T Consensus 7 Vk~ln~k~~~~---~ts----D~~d~~l~-ev~~~l~~-A~dyCnn~F~~dg~~~lP~gVkkFVA~-~iky~~~p~t~~n 76 (116) T protein:vir:10 7 VKLLLKKNGVE---VKS----DEEEIFKM-EVDGILED-VRDITNNDFMKDGQVIYPYSIKKYVAD-VLEYYQRPEVKKN 76 (116) T ss_pred HHHHhcCCCCC---ccc----chHHHHHH-hhHHHHHH-HHHHhcCcccccCCccCcchhHHHHHH-HHHhhcccccccC Confidence 33331 1110 111 11233222 34455444 7889999997644 45888888 5554 6778775 45667 Q ss_pred chhhcccceeeeeCccccchHHHHHHHH--HhhcC-cceeee Q lcl|NC_019912. 76 VVSEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRT-PSVRIR 114 (121) Q Consensus 76 vkSE~lGsy~VtY~deg~YPk~llkGL~--~RlRt-psvrir 114 (121) .+|-+||.-|-||. -+-|+++.+-|+ ||||= |---|| T Consensus 77 lssRSMGTVSYty~--Te~P~~~~~~L~PyRklrw~~~~~~~ 116 (116) T protein:vir:10 77 LKSRSMGTVSYTYN--DGVPDYISGVLNRYKRAKFHPFKPIR 116 (116) T ss_pred cccccccceeeecc--ccchHHHHHhhhhhhhcccCCCCCCC Confidence 99999998776665 458999999997 56663 444455 No 34 >protein:vir:94126 Length: 116 # NCBI annotation: ORF041 # Family: family:all:789 # ACLAME annotation(s): phi:0000067 - phage portal associated protein # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240236;genbank:gi:66395926;genbank:GeneID:5133295 Probab=76.37 E-value=0.05 Score=27.74 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=62.6 Q ss_pred Cccch--hhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccc-cCCCCchh-HHHHHHHhhhhc-ccccc Q lcl|NC_019912. 1 MKMIT--TFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEG-REFPKSYE-VVAFRLITYHLS-GEGAD 75 (121) Q Consensus 1 mkmit--tfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg-~efP~~Ye-IIA~rlV~yhl~-~e~ed 75 (121) .|||. +.+- .|. .-+++|.- ..+|..-. ...|+-++|-..| .-+|..-+ .||. .+.|+|- ++... T Consensus 7 Vk~ln~k~~~~---~ts----D~~d~~l~-ev~~~l~~-A~dyCnn~F~~dg~~~lP~gVkkFVA~-~iky~~~p~t~~n 76 (116) T protein:vir:94 7 VKLLLKKNGVE---VKS----DEEEIFKM-EVDGILED-VRDITNNDFMKDGQVIYPYSIKKYVAD-VLEYYQRPEVKKN 76 (116) T ss_pred HHHHhcCCCCC---ccc----chHHHHHH-hhHHHHHH-HHHHhcCcccccCCccCcchhHHHHHH-HHHhhcccccccC Confidence 33331 1110 111 11233222 34455444 7889999997644 45888888 5554 6778775 45667 Q ss_pred chhhcccceeeeeCccccchHHHHHHHH--HhhcC-cceeee Q lcl|NC_019912. 76 VVSEQMGSYRVQYGPEGIYPKTLLTGLS--RRMRT-PSVRIR 114 (121) Q Consensus 76 vkSE~lGsy~VtY~deg~YPk~llkGL~--~RlRt-psvrir 114 (121) .+|-+||.-|-||. -+-|+++.+-|+ ||||= |---|| T Consensus 77 lssRSMGTVSYty~--Te~P~~~~~~L~PyRklrw~~~~~~~ 116 (116) T protein:vir:94 77 LKSRSMGTVSYTYN--DGVPDYISGVLNRYKRAKFHPFKPIR 116 (116) T ss_pred cccccccceeeecc--ccchHHHHHhhhhhhhcccCCCCCCC Confidence 99999998776665 458999999997 56663 444455 No 35 >protein:vir:2738 Length: 112 # NCBI annotation: hypothetical protein # Family: family:all:372 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695111;genbank:gi:23455880;genbank:GeneID:955641 Probab=74.83 E-value=0.097 Score=26.13 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=56.6 Q ss_pred Cccc--hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccch Q lcl|NC_019912. 1 MKMI--TTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVV 77 (121) Q Consensus 1 mkmi--ttfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvk 77 (121) |.|- .+.++--..+. .-++++++ ++|--+...|.-|+|.+ ++|..++.|...++-.+. -.-.||.+ T Consensus 1 ~~l~~~~~L~~iK~~lg----~~dD~lL~-~ii~~a~~~i~~~l~~~------~iP~~l~~Iv~evavkryNR~g~EG~~ 69 (112) T protein:vir:27 1 MTLDKDKVIKNVSVDLN----TNDDALLK-ILLERVVNHFKSEYGVE------EIDDKLAFIFEDCVIKRFNRRGAEGAK 69 (112) T ss_pred CcchhHHHHHHHHhhcC----CChhHHHH-HHHHHHHHHHHHhcCcc------ccchhHHHHHHHHHHHHhcccCccccc Confidence 3332 12222111110 11366777 67777888999999864 799999955555544433 34457899 Q ss_pred hhcccceeeeeCcc----ccchHHHHHHHHH---hhcCcceeee Q lcl|NC_019912. 78 SEQMGSYRVQYGPE----GIYPKTLLTGLSR---RMRTPSVRIR 114 (121) Q Consensus 78 SE~lGsy~VtY~de----g~YPk~llkGL~~---RlRtpsvrir 114 (121) |++-+..|++|.+. ..|=.-| .-.+. ..+...||.- T Consensus 70 S~SeeG~S~sf~d~~~df~~Y~~~l-~~~~~~~~~~~~G~v~Fl 112 (112) T protein:vir:27 70 SESVDGHSMSYYDNENEFKPYDDML-QRLYGTSGQAKEGEVLFL 112 (112) T ss_pred eeecCceeeeecccccchhhhHHHH-HHHHhhcCCCCCceeeeC Confidence 99999999999542 2333333 22221 1122333333 No 36 >protein:vir:1887 Length: 108 # NCBI annotation: gp6 # Family: family:all:6764 # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037667;genbank:gi:9634125;genbank:GeneID:1262472 Probab=67.44 E-value=0.056 Score=27.44 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=60.9 Q ss_pred Cccchhhhhhhhhh-hHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKST-QKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakst-qkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE 79 (121) |.|||- +. +|.- .-+. .-.|++|+ .+|.-..+.|..|+|.+|...+...|++.. .|..++--|+...+|.+... T Consensus 6 M~~vtL-ee-~K~hLRid~-dddD~lI~-~~i~AA~~~v~~~~~~~~~~~~~~~p~~ik-~AiLllv~~~YenRE~~~~~ 80 (108) T protein:vir:18 6 LDVISL-SL-FKQQIEFEE-DDRDELIT-LYAQAAFDYCMRWCDEPAWKVAADIPAAVK-GAVLLVFADMFEHRTAQSEV 80 (108) T ss_pred ccccCH-HH-HHHHcCCCC-CcchHHHH-HHHHHHHHHHHHHhCCcccccccccchHHH-HHHHHHHHHHHhcccccccc Confidence 777764 21 2211 1122 24788998 899999999999999998777677777665 57777777888888763211 Q ss_pred cccceeeeeCccccchHHHHHHHHHhhcCcceeeeccCC--CCC Q lcl|NC_019912. 80 QMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRP--EGR 121 (121) Q Consensus 80 ~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrp--egr 121 (121) .+ .. |. +. .+|-.|--+.||..- ||. T Consensus 81 ~~----------~~-~~----~~-~~LL~pYR~~~g~~~~~~~~ 108 (108) T protein:vir:18 81 QL----------YE-NA----AA-ERMMFIHRNWRGKAESEEGS 108 (108) T ss_pred hh----------hh-hH----HH-HHHHHHHHhcCCCCCcccCC Confidence 11 00 21 22 355556556666432 333 No 37 >protein:vir:192 Length: 108 # NCBI annotation: Gp6 # Family: family:all:6764 # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037702;genbank:gi:9634167;genbank:GeneID:1262532 Probab=67.44 E-value=0.056 Score=27.44 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=60.9 Q ss_pred Cccchhhhhhhhhh-hHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhh Q lcl|NC_019912. 1 MKMITTFDRYAKST-QKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSE 79 (121) Q Consensus 1 mkmittfdryakst-qkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE 79 (121) |.|||- +. +|.- .-+. .-.|++|+ .+|.-..+.|..|+|.+|...+...|++.. .|..++--|+...+|.+... T Consensus 6 M~~vtL-ee-~K~hLRid~-dddD~lI~-~~i~AA~~~v~~~~~~~~~~~~~~~p~~ik-~AiLllv~~~YenRE~~~~~ 80 (108) T protein:vir:19 6 LDVISL-SL-FKQQIEFEE-DDRDELIT-LYAQAAFDYCMRWCDEPAWKVAADIPAAVK-GAVLLVFADMFEHRTAQSEV 80 (108) T ss_pred ccccCH-HH-HHHHcCCCC-CcchHHHH-HHHHHHHHHHHHHhCCcccccccccchHHH-HHHHHHHHHHHhcccccccc Confidence 777764 21 2211 1122 24788998 899999999999999998777677777665 57777777888888763211 Q ss_pred cccceeeeeCccccchHHHHHHHHHhhcCcceeeeccCC--CCC Q lcl|NC_019912. 80 QMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRP--EGR 121 (121) Q Consensus 80 ~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrp--egr 121 (121) .+ .. |. +. .+|-.|--+.||..- ||. T Consensus 81 ~~----------~~-~~----~~-~~LL~pYR~~~g~~~~~~~~ 108 (108) T protein:vir:19 81 QL----------YE-NA----AA-ERMMFIHRNWRGKAESEEGS 108 (108) T ss_pred hh----------hh-hH----HH-HHHHHHHHhcCCCCCcccCC Confidence 11 00 21 22 355556556666432 333 No 38 >protein:vir:4857 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049397;genbank:gi:9632425;genbank:GeneID:1258493 Probab=66.11 E-value=0.053 Score=27.56 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=55.0 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccc-cccccCCCCchhHHHHHHHhhhhccccccchhhcc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDF-EAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQM 81 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~df-eaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~l 81 (121) |+-|.+..-....-..+ -.|++|+ .+|.--.++|.+++|.+- ..+..++|+.+.+-..+||+ |+...|+-+ ++. T Consensus 1 M~vtLeevK~~LRID~d-~dD~li~-~~i~aA~~~i~~~ig~~~~~~~~~~~~~~~~~Avl~lv~-~~Y~NR~~~-~~~- 75 (104) T protein:vir:48 1 MSVSKETIMQTLNLDET-DDTALIP-AYIESARQYVVNSVGDDPKFYNLDSVRALFDTAVIALTS-SYFTYRVAL-TDT- 75 (104) T ss_pred CcccHHHHHHHcCCCCc-cchHHHH-HHHHHHHHHHHHhhCCCCCcccccCCChhHHHHHHHHHH-HHHhhhhhh-ccc- Confidence 77787765433333333 3789998 899999999999999642 12345678888876666666 666666532 111 Q ss_pred cceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 82 GSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 82 Gsy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ....|-++ =.+|+.-||....+.. .-+|- T Consensus 76 ~~~~ip~~-----v~sli~~lR~~y~~~~------~~~~~ 104 (104) T protein:vir:48 76 ATYPVNLT-----LNSIIGQLRGLYATYS------EERGD 104 (104) T ss_pred ccchhhHH-----HHHHHHHHHHhhhhhc------ccCCC Confidence 01111110 0233333433332211 01111 No 39 >protein:vir:4904 Length: 113 # NCBI annotation: gp113 # Family: family:all:372 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056682;genbank:gi:9635017;genbank:GeneID:1262667 Probab=64.66 E-value=0.3 Score=23.48 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=56.1 Q ss_pred Ccc--chhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhh-ccccccch Q lcl|NC_019912. 1 MKM--ITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHL-SGEGADVV 77 (121) Q Consensus 1 mkm--ittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl-~~e~edvk 77 (121) |.| .++.+.--..+. .-++++++ ++|--....|.-|+|.+ ++|+.++.|...++-.+. -.-.||.+ T Consensus 2 ~~l~~~~~L~~vK~~lg----i~dD~lL~-~li~~a~~~i~~~l~~~------~iP~~l~~Iv~evavkryNR~g~EG~~ 70 (113) T protein:vir:49 2 MALDKEKVIQNVSVDLN----INDDNLLG-ILLERIVNHFKAEYGVD------EVDDNLAFIFEDCLVKRFNRRGAEGAR 70 (113) T ss_pred cchhHHHHHHHHHHhcC----CChhHHHH-HHHHHHHHHHHHHhCcc------ccchHHHHHHHHHHHHHhcccCccccc Confidence 111 111111111110 01366676 67777888899999874 799999966555544433 34557899 Q ss_pred hhcccceeeeeCcc----ccchHHHHHHHHH--hhcCcceeee Q lcl|NC_019912. 78 SEQMGSYRVQYGPE----GIYPKTLLTGLSR--RMRTPSVRIR 114 (121) Q Consensus 78 SE~lGsy~VtY~de----g~YPk~llkGL~~--RlRtpsvrir 114 (121) |++-+..|++|.+. ..|=.-|-+-+.. +.+-..||.- T Consensus 71 S~SeeG~S~sf~d~~~df~eY~~~l~~~~~~~~~~~~G~v~Fl 113 (113) T protein:vir:49 71 SESIDGHSMSYYDNENEFDPYDNMLQRLYGTSGQAKEGEVLFL 113 (113) T ss_pred eeecCceeeeecccccccchhHHHHHHHHhhcCCCCCcceeeC Confidence 99999999999532 2343333222211 1122223332 No 40 >protein:vir:102158 Length: 99 # NCBI annotation: uncharacterized phage protein (possible DNA packaging) # Family: family:all:316 # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699940;genbank:gi:110804046;genbank:GeneID:4206702 Probab=55.53 E-value=0.094 Score=26.21 Aligned_cols=96 Identities=20% Similarity=0.265 Sum_probs=52.1 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhccc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~lG 82 (121) |+-|.+.--+.-.-++.. .|++|+ .+|.-..++|..++|..|. ++++.+.+.+.+|| -|+...|+.+.....- T Consensus 1 M~vtLee~K~~LRID~d~-dD~lI~-~~i~aA~~~i~~~~~~~~~----~~~~~~k~Avl~lv-~~~YenR~~~~~~~~~ 73 (99) T protein:vir:10 1 MILSVDEVKNYLRVDYDE-DDILIQ-DLIESAEDYLYNATGKKFT----EKNKLAKRYCLALV-YDWYKDKGMNIRATKN 73 (99) T ss_pred CcCCHHHHHHHcCCCCCc-chHHHH-HHHHHHHHHHHHhhCCCCC----CCChHHHHHHHHHH-HHhHhcchhhhhhhhc Confidence 776766433322223332 678888 8899999999999999986 56788876666665 4555555543221110 Q ss_pred ---ceeeeeCccccchHHHHHHHHHhhcCcc Q lcl|NC_019912. 83 ---SYRVQYGPEGIYPKTLLTGLSRRMRTPS 110 (121) Q Consensus 83 ---sy~VtY~deg~YPk~llkGL~~RlRtps 110 (121) +..|-|+ =.+|+.-||-.-..-| T Consensus 74 ~~~~~~lp~~-----v~sli~qlr~~~~~~~ 99 (99) T protein:vir:10 74 TTVSEKVKYT-----LQSILLQLKFCKEEDT 99 (99) T ss_pred cchhhhhhHH-----HHHHHHHHhhccCCCC Confidence 0111111 0233333333322222 No 41 >protein:vir:4458 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700381;genbank:gi:23505453;genbank:GeneID:955660 Probab=52.19 E-value=0.11 Score=25.83 Aligned_cols=96 Identities=11% Similarity=0.149 Sum_probs=51.1 Q ss_pred cchhhhhhhhhhhHHHH-HHHHHHHHHHhHHHHHHHHhhhcccccccc----------ccCCCCchhHHHHHHHhhhhcc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYT-AMQKEYIEDILIPVVTEFIVGYTGVDFEAE----------GREFPKSYEVVAFRLITYHLSG 71 (121) Q Consensus 3 mittfdryakstqkeyt-amq~~~ied~~ip~v~~fi~~ytg~dfeae----------g~efP~~YeIIA~rlV~yhl~~ 71 (121) |+.|.+.--..-.-+-. .--|.+|+ .+|.-..++|..|+|..|... |-.+|+++.. |..++.-|+-. T Consensus 1 M~vtLee~K~hLRId~D~~dDD~lI~-~~i~AA~~~i~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~-AiLllv~~~Y~ 78 (107) T protein:vir:44 1 MLLSVEEIKAQLRLDEDFEADERYLQ-LLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRL-GMLMLISHFYE 78 (107) T ss_pred CCCCHHHHHHHcCCCCCCchhHHHHH-HHHHHHHHHHHHhhcCccccccccccccccccccchhhHHH-HHHHHHHHHHh Confidence 88888764333222111 01256888 899999999999999776432 2234566654 55555557777 Q ss_pred ccccchhhcccceeeeeCccccchHHHHHHHHHhhcCcc Q lcl|NC_019912. 72 EGADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRTPS 110 (121) Q Consensus 72 e~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRtps 110 (121) .|+.+...+.. .|.++ =++|+.-+|. =|. T Consensus 79 NRe~~~~~~~~--~lP~~-----v~~Ll~~yR~---~p~ 107 (107) T protein:vir:44 79 NRSSVTEVEKL--DMPQS-----FGWLVGPYRY---FPQ 107 (107) T ss_pred hhhhhcccccc--ccCHH-----HHHHHHHhhh---cCC Confidence 88765322221 12111 0122222211 122 No 42 >protein:vir:94761 Length: 132 # NCBI annotation: unknown # Family: family:all:1271 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996708;genbank:gi:45597423;genbank:GeneID:2769029 Probab=50.76 E-value=0.6 Score=21.80 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=69.4 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhh---hccccccccccCCCCchh----HHHHHHHhhhhcc-- Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVG---YTGVDFEAEGREFPKSYE----VVAFRLITYHLSG-- 71 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~---ytg~dfeaeg~efP~~Ye----IIA~rlV~yhl~~-- 71 (121) |.-..|-|-|.+.. ...+.-+++..+ .||.....+|+. -.|.+..+..-+-|...+ .|+..+|.--|.. T Consensus 1 m~~fAtv~Dl~~r~-r~L~~dE~~ra~-~LL~dAs~~iR~~~~~~~~~~~~~~~~~~d~~~~~~k~V~~~~V~Ral~~~~ 78 (132) T protein:vir:94 1 MNPFATVDDLTMLW-RPLKGDEKERAE-KLLEIVSDTLREEADKVGRDLDVMISEKPSYFSSVVKSVTVDIVARTLMTST 78 (132) T ss_pred CCCcCCHHHHHHHh-ccCChhHHHHHH-HHHHHHHHHHHHHHhhhccccccccCCCCccchhHHHHHHHHHHHHHhcCCC Confidence 77777778777666 366666777777 788888888862 235555555455555545 3555666666643 Q ss_pred cccc--chhhcccce--eeeeC-ccccchHHHHHHHHHhhcCc-----ceeeeccC Q lcl|NC_019912. 72 EGAD--VVSEQMGSY--RVQYG-PEGIYPKTLLTGLSRRMRTP-----SVRIRGRR 117 (121) Q Consensus 72 e~ed--vkSE~lGsy--~VtY~-deg~YPk~llkGL~~RlRtp-----svrirgrr 117 (121) .-++ -.|+..|+| ++||. |.|. --|++..++||+=- ++-+-|.. T Consensus 79 ~~~g~tq~S~TaG~ys~S~T~~np~G~--lylt~~e~~~LGl~~~r~~~i~~~~~~ 132 (132) T protein:vir:94 79 DQEPMTQTTESALGYSVSGSYLVPGGG--LFIKNSELSRLGLKKQRFGVIDFYGND 132 (132) T ss_pred CCCCceeeeeecccceeeeeeecCCCC--ceeChHHHHhhCCCCCceEEEeecCCC Confidence 2234 567999988 88998 5554 23666677777321 11122211 No 43 >protein:vir:9761 Length: 140 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795523;genbank:gi:28876281;genbank:GeneID:1257822 Probab=50.13 E-value=0.51 Score=22.19 Aligned_cols=116 Identities=18% Similarity=0.219 Sum_probs=67.2 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhc---ccccccccc---CCCCchhHHHHHHHhhhh-cc-c Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYT---GVDFEAEGR---EFPKSYEVVAFRLITYHL-SG-E 72 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~yt---g~dfeaeg~---efP~~YeIIA~rlV~yhl-~~-e 72 (121) |--..|-|-+.+.. ...+.-+++.++ .||.....+|+.-- |.+..+..- .++..-..|+..+|..-| .+ + T Consensus 1 m~~fATv~Dv~~rw-r~Lt~dE~~ra~-~LL~dAS~~iR~~~p~~g~~~~~~~~~~~~~~~~~k~V~~~mV~Ral~~~~d 78 (140) T protein:vir:97 1 MGNFATTDDVILLW-RPLSVDELKRAN-ALLKVVSDTLRMEADKVGKDLDKTMVDKPYFVNVIKSVTVDIVARTLMTSTQ 78 (140) T ss_pred CCcCCCHHHHHHHh-cCCCHhHHHHHH-HHHHHHHHHHHHhhhhccCCcchhcccCccchhHHHHHHHHHHHHHhcCCCC Confidence 88788888888777 467777778888 78888889997531 233222211 122222234455555544 23 3 Q ss_pred ccc--chhhcccce--eeeeC-ccc-cchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 73 GAD--VVSEQMGSY--RVQYG-PEG-IYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 73 ~ed--vkSE~lGsy--~VtY~-deg-~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) .++ -.|+.-|+| ++||. |.| -| |++..++||+=-.-|+..--+.|. T Consensus 79 ~~G~tq~S~TaG~ys~S~T~~np~G~ly---lt~~e~~~LGl~~~r~~~i~~~g~ 130 (140) T protein:vir:97 79 GEPMSQESQSALGYTWSGTYLVPGGGLF---IKDNELKRLGLKKQRYGGIELYGE 130 (140) T ss_pred CCcceeeeeeccchhheeeeecCCCCce---eChHHHHHhCCCCCceeeecccCc Confidence 345 567999999 88888 433 34 455566666432233333333333 No 44 >protein:vir:81159 Length: 95 # NCBI annotation: putative DNA packaging protein # Family: family:all:316 # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285813;genbank:gi:148747734;genbank:GeneID:5247202 Probab=45.00 E-value=0.21 Score=24.27 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=48.1 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhc Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQ 80 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~ 80 (121) |-|+| .+.--..-.-++. -.|++|+ .+|--..++|..++|..|+ ++|+.+.+...+||+ |+...|+.+. +. T Consensus 1 Mm~vt-Lee~K~~LRID~d-~dD~lI~-~li~aA~~~i~~~~g~~~~----~~~~~~~~Avl~lv~-~~YeNRe~~~-~~ 71 (95) T protein:vir:81 1 MMIVT-LEEVKNWLRVDFS-DDDALIT-TLINAAEEYLKNATGTTFD----ATNHLAKIFCMTLIA-DWYENRELVG-RA 71 (95) T ss_pred CCcCC-HHHHHHHcCCCCC-cchHHHH-HHHHHHHHHHHHhhccccc----cCchHHHHHHHHHHH-HHHhhccccc-cc Confidence 55544 3332111111222 2578888 7899999999999999886 578888766555555 5555555321 11 Q ss_pred ccceeeeeCccccchHHHHHHHHHhhcCcceeeec Q lcl|NC_019912. 81 MGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRG 115 (121) Q Consensus 81 lGsy~VtY~deg~YPk~llkGL~~RlRtpsvrirg 115 (121) +.. -|.++ ..|=-.||-.+..=.. T Consensus 72 --~~~--------~p~~v-~sll~~lr~~~~~~~~ 95 (95) T protein:vir:81 72 --SDQ--------VRPIL-QSILAQLTYAYGGETA 95 (95) T ss_pred --ccc--------ccHHH-HHHHHHhhhccccccC Confidence 111 23222 1222223322111000 No 45 >protein:vir:43 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463469;swissprot:trembl:q9t1b5;genbank:gi:16798791;uniprot:Q9T1B5;genbank:GeneID:922374 Probab=38.75 E-value=0.89 Score=20.86 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=38.6 Q ss_pred Cccchhhhhhhhhh-hHHHHHHHHHHHHHHhHHHHHHHHhhhc-----cccccccccCCCCchhHHHHHHHhhh-h---- Q lcl|NC_019912. 1 MKMITTFDRYAKST-QKEYTAMQKEYIEDILIPVVTEFIVGYT-----GVDFEAEGREFPKSYEVVAFRLITYH-L---- 69 (121) Q Consensus 1 mkmittfdryakst-qkeytamq~~~ied~~ip~v~~fi~~yt-----g~dfeaeg~efP~~YeIIA~rlV~yh-l---- 69 (121) |--+ |++-|.... .+... +++ .+ -+++-....|..+| ++||+..-..=|......+-.++.|. - T Consensus 1 M~Y~-d~~~Y~~~y~g~~i~--e~~-F~-~l~~rAs~~ID~~T~~ri~~~~~~~~~~~~~~~vk~A~c~q~e~~~~~g~~ 75 (131) T protein:vir:43 1 MPYT-TLEFYNDEYAGEHLE--QDE-FD-KLLKHAERKIDSVTFYRIRKGGIESFSEFIQHQIQLATCNQIEYFKEAGGT 75 (131) T ss_pred CCCC-CHHHHHHhhCCCCCC--HhH-HH-HHHHHHHHHHHHHhcccccccCccccchhhHHHHHHHHHHHHHHHHHhHHH Confidence 3322 333332211 00000 001 11 23333444444444 45555321111111111111122222 1 Q ss_pred -ccccccchhhcccceeeeeCccccch-----HHHHHHHHHhh-cCcceeeeccCCC Q lcl|NC_019912. 70 -SGEGADVVSEQMGSYRVQYGPEGIYP-----KTLLTGLSRRM-RTPSVRIRGRRPE 119 (121) Q Consensus 70 -~~e~edvkSE~lGsy~VtY~deg~YP-----k~llkGL~~Rl-Rtpsvrirgrrpe 119 (121) .....+++||+.|+|||+|+.-+.== ..+-+.+..=| +| -..-||---. T Consensus 76 s~~~~~~~~S~svG~~Svs~~~~~~~~~~~~~~~~~~~a~~~L~~T-GLlyrGV~~~ 131 (131) T protein:vir:43 76 SELAVSKPDNVSIGRTSISDSNFASTATSLNSGLIGSDVRSYLAHT-GLLYNGVGVR 131 (131) T ss_pred hhhhccccCeeecCceEEeecccccchhhhchhhhHHHHHHHHhcc-CCeecCCCCC Confidence 11234589999999999998422100 00112222222 22 2222221111 No 46 >protein:vir:4954 Length: 104 # NCBI annotation: putative DNA packaging protein # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049930;genbank:gi:9632901;genbank:GeneID:1262077 Probab=37.70 E-value=0.47 Score=22.37 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=49.5 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccc-cccCCCCchhHHHHHHHhhhhccccccchhhcc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEA-EGREFPKSYEVVAFRLITYHLSGEGADVVSEQM 81 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfea-eg~efP~~YeIIA~rlV~yhl~~e~edvkSE~l 81 (121) |+-|.+..-+.-.-++. --|++|+ .+|---.++|..++|.+-.. +..++|+.|.+...+||+ |+...|+-+.+-.. T Consensus 1 M~vtLeeiK~~LRID~d-ddD~li~-~~i~aA~~yi~~aig~~~~~~~~~~~~~~~~~Avl~Lv~-~~YeNR~~~~~~~~ 77 (104) T protein:vir:49 1 MSVSKTSIMQTLNLDET-DDTALIP-AYIESAKQYIINAVGSDSKFYDLDSVRALFDTAVIALTS-SYFTYRVALTDTAT 77 (104) T ss_pred CcccHHHHHHHcCCCCc-cchHHHH-HHHHHHHHHHHHhhCCCCccccccCCChHHHHHHHHHHH-HHHhhchhcccccc Confidence 77777654333332333 2688898 88999999999999976221 234567888765555554 55555543221110 Q ss_pred cceeeeeCccccchH---HHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 82 GSYRVQYGPEGIYPK---TLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 82 Gsy~VtY~deg~YPk---~llkGL~~RlRtpsvrirgrrpegr 121 (121) . ..|- +|+.-||-......- - +|- T Consensus 78 --~--------~vp~~v~sli~qLr~~y~~~~e----~--~~~ 104 (104) T protein:vir:49 78 --Y--------PVNLTLNSIIGQLRGLYATYSE----E--RGD 104 (104) T ss_pred --c--------hhhHHHHHHHHHHHHhhhhhhh----c--cCC Confidence 0 1121 222222221111100 0 000 No 47 >protein:vir:105005 Length: 96 # NCBI annotation: putative DNA packaging protein phage # Family: family:all:316 # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459970;genbank:gi:85701385;genbank:GeneID:3882146 Probab=37.47 E-value=0.42 Score=22.67 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=49.8 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhccc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~lG 82 (121) |+-|.+.--+.-.-++. -|++|+ .+|..-.++|..++|..|. +.|+.+.+...+||. |+-..|+-+.... T Consensus 1 M~vtLee~K~~LRID~D--dD~lI~-~~i~aA~~~i~~~~g~~~~----e~~~~~k~Avl~lv~-~~YenR~~~~~~~-- 70 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDGD--DDPTIT-MLIKAAELYIYKATGKTFT----QTNEDAKLLCLFLVA-DWYGNRLLVGEKA-- 70 (96) T ss_pred CcCCHHHHHHHcCCCCc--hhHHHH-HHHHHHHHHHHHhhCCCCC----CCcchHHHHHHHHHH-HHHhhhhhccccc-- Confidence 77777654333333443 478998 7899999999999998875 456777665555554 5555555322111 Q ss_pred ceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ....|-++.. |=-.||.=.-- .-|.+ T Consensus 71 --------~~~ip~~v~s-li~qLr~~~~~----~~e~~ 96 (96) T protein:vir:10 71 --------SEKIRTIVQS-MILQLQYASEP----QEERK 96 (96) T ss_pred --------cchhhHHHHH-HHHHHhhcCCc----ccccC Confidence 1112332221 21223221110 01111 No 48 >protein:vir:102083 Length: 96 # NCBI annotation: DNA packaging protein # Family: family:all:316 # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512316;genbank:gi:89152485;genbank:GeneID:3953076 Probab=37.47 E-value=0.42 Score=22.67 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=49.8 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhccc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~lG 82 (121) |+-|.+.--+.-.-++. -|++|+ .+|..-.++|..++|..|. +.|+.+.+...+||. |+-..|+-+.... T Consensus 1 M~vtLee~K~~LRID~D--dD~lI~-~~i~aA~~~i~~~~g~~~~----e~~~~~k~Avl~lv~-~~YenR~~~~~~~-- 70 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDGD--DDPTIT-MLIKAAELYIYKATGKTFT----QTNEDAKLLCLFLVA-DWYGNRLLVGEKA-- 70 (96) T ss_pred CcCCHHHHHHHcCCCCc--hhHHHH-HHHHHHHHHHHHhhCCCCC----CCcchHHHHHHHHHH-HHHhhhhhccccc-- Confidence 77777654333333443 478998 7899999999999998875 456777665555554 5555555322111 Q ss_pred ceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ....|-++.. |=-.||.=.-- .-|.+ T Consensus 71 --------~~~ip~~v~s-li~qLr~~~~~----~~e~~ 96 (96) T protein:vir:10 71 --------SEKIRTIVQS-MILQLQYASEP----QEERK 96 (96) T ss_pred --------cchhhHHHHH-HHHHHhhcCCc----ccccC Confidence 1112332221 21223221110 01111 No 49 >protein:vir:107614 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338189;genbank:gi:77020184;genbank:GeneID:3703745 Probab=37.47 E-value=0.42 Score=22.67 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=49.8 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhccc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~lG 82 (121) |+-|.+.--+.-.-++. -|++|+ .+|..-.++|..++|..|. +.|+.+.+...+||. |+-..|+-+.... T Consensus 1 M~vtLee~K~~LRID~D--dD~lI~-~~i~aA~~~i~~~~g~~~~----e~~~~~k~Avl~lv~-~~YenR~~~~~~~-- 70 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDGD--DDPTIT-MLIKAAELYIYKATGKTFT----QTNEDAKLLCLFLVA-DWYGNRLLVGEKA-- 70 (96) T ss_pred CcCCHHHHHHHcCCCCc--hhHHHH-HHHHHHHHHHHHhhCCCCC----CCcchHHHHHHHHHH-HHHhhhhhccccc-- Confidence 77777654333333443 478998 7899999999999998875 456777665555554 5555555322111 Q ss_pred ceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ....|-++.. |=-.||.=.-- .-|.+ T Consensus 71 --------~~~ip~~v~s-li~qLr~~~~~----~~e~~ 96 (96) T protein:vir:10 71 --------SEKIRTIVQS-MILQLQYASEP----QEERK 96 (96) T ss_pred --------cchhhHHHHH-HHHHHhhcCCc----ccccC Confidence 1112332221 21223221110 01111 No 50 >protein:vir:102863 Length: 96 # NCBI annotation: conserved phage protein # Family: family:all:316 # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338138;genbank:gi:77020236;genbank:GeneID:3703772 Probab=37.47 E-value=0.42 Score=22.67 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=49.8 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccccchhhccc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGADVVSEQMG 82 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~lG 82 (121) |+-|.+.--+.-.-++. -|++|+ .+|..-.++|..++|..|. +.|+.+.+...+||. |+-..|+-+.... T Consensus 1 M~vtLee~K~~LRID~D--dD~lI~-~~i~aA~~~i~~~~g~~~~----e~~~~~k~Avl~lv~-~~YenR~~~~~~~-- 70 (96) T protein:vir:10 1 MLVTLEEAKEWIRVDGD--DDPTIT-MLIKAAELYIYKATGKTFT----QTNEDAKLLCLFLVA-DWYGNRLLVGEKA-- 70 (96) T ss_pred CcCCHHHHHHHcCCCCc--hhHHHH-HHHHHHHHHHHHhhCCCCC----CCcchHHHHHHHHHH-HHHhhhhhccccc-- Confidence 77777654333333443 478998 7899999999999998875 456777665555554 5555555322111 Q ss_pred ceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCCC Q lcl|NC_019912. 83 SYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEGR 121 (121) Q Consensus 83 sy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpegr 121 (121) ....|-++.. |=-.||.=.-- .-|.+ T Consensus 71 --------~~~ip~~v~s-li~qLr~~~~~----~~e~~ 96 (96) T protein:vir:10 71 --------SEKIRTIVQS-MILQLQYASEP----QEERK 96 (96) T ss_pred --------cchhhHHHHH-HHHHHhhcCCc----ccccC Confidence 1112332221 21223221110 01111 No 51 >protein:vir:93592 Length: 108 # NCBI annotation: hypothetical protein # Family: family:all:1879 # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449297;genbank:gi:157166045;uniprot:Q6H9U4;genbank:GeneID:5580414 Probab=33.04 E-value=1.1 Score=20.35 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=58.0 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhcccccc--------ccccCCCCchhHHHHHHHhhhhccc Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFE--------AEGREFPKSYEVVAFRLITYHLSGE 72 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfe--------aeg~efP~~YeIIA~rlV~yhl~~e 72 (121) |-|+-|.+.--..-.-+.. -.|++|+ .+|.--.++|..|.+...+ +.+.+.|+.. -.|..++.-|+-.. T Consensus 1 mm~~vtLeevK~hLRId~d-~dD~li~-~~i~aA~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~i-~~AvLlLv~~~Yen 77 (108) T protein:vir:93 1 MTALLTLEEIKAHLRVDHD-ADDDMLM-DKVRQATAVLLAYIQGSRDKVIREDGELIPGEALTRM-KGAAMRLTGMLYRN 77 (108) T ss_pred CCcCCCHHHHHHHcCCCCC-cChHHHH-HHHHHHHHHHHHHhccccccccccccccccccCChHH-HHHHHHHHHHHHhc Confidence 6666666654333222332 3688898 7889999999999875433 1122233333 34666666677778 Q ss_pred cccchhhcccceeeeeCccccchHHHHHHHHHhhcCccee Q lcl|NC_019912. 73 GADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVR 112 (121) Q Consensus 73 ~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvr 112 (121) ||.+....+... .=|-+ .+.|=-.+|.|.+- T Consensus 78 Re~~~~~~~~~~--------elP~~-v~~Ll~~~R~p~~~ 108 (108) T protein:vir:93 78 PDLAEREELLQG--------ELPFS-VSVLIYDLRCPTVL 108 (108) T ss_pred cccccccccccc--------cCCHH-HHHHHHHccccccC Confidence 887643322211 12333 34555678999887 No 52 >protein:vir:100103 Length: 120 # NCBI annotation: gp7 # Family: family:all:363 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945037;genbank:gi:38707897;genbank:GeneID:2744150 Probab=33.01 E-value=1.1 Score=20.27 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=54.5 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhccccccccc----------------cCCCCchhHHHHHH Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEG----------------REFPKSYEVVAFRL 64 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg----------------~efP~~YeIIA~rl 64 (121) |.|||- +.-...-.-+.. -.|++|+ .+|.--.++|..|+|..|-... ...|+... .|..+ T Consensus 5 m~~vtL-~e~K~hLRvd~d-~DD~lI~-~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~AvLl 80 (120) T protein:vir:10 5 TPIVSL-EVALAHLREDAG-VADDLIK-IYIGAATQSASDYVDRKLYANDAEMQAAVADATAGADPIVANDAIR-AAILL 80 (120) T ss_pred CCccCH-HHHHHHcCCCCC-cchHHHH-HHHHHHHHHHHHHhCCcccccccccchhhhccccccccccCCHHHH-HHHHH Confidence 887773 332222222222 4688998 7999999999999997764321 22454444 56666 Q ss_pred HhhhhccccccchhhcccceeeeeCccccch---HHHHHHHHHhhcCcce Q lcl|NC_019912. 65 ITYHLSGEGADVVSEQMGSYRVQYGPEGIYP---KTLLTGLSRRMRTPSV 111 (121) Q Consensus 65 V~yhl~~e~edvkSE~lGsy~VtY~deg~YP---k~llkGL~~RlRtpsv 111 (121) +.-|+...+|++..-+.. ....-| ++|+.-+|.+ |-| T Consensus 81 lvg~~YenRe~~~~~~~~-------~~~~lP~~v~~Ll~~yR~~---~gv 120 (120) T protein:vir:10 81 TIGKLYAFREDVVSGASA-------SVTELPSGAKSLLFPYRVG---LGV 120 (120) T ss_pred HHHHHHhchhhhhhcccc-------cccccCHHHHHHHHHhhhc---cCC Confidence 667777777775432211 111223 3344433333 555 No 53 >protein:vir:78068 Length: 178 # NCBI annotation: gp7 # Family: family:all:6563 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468791;genbank:gi:157325372;genbank:GeneID:5601830 Probab=29.48 E-value=0.34 Score=23.14 Aligned_cols=91 Identities=22% Similarity=0.247 Sum_probs=57.1 Q ss_pred CccchhhhhhhhhhhHHHHHHH-HHHHHHHhHHHH--HHHHhhhccccccccccCCCCchhHHHHHHHhhhhccccc-cc Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQ-KEYIEDILIPVV--TEFIVGYTGVDFEAEGREFPKSYEVVAFRLITYHLSGEGA-DV 76 (121) Q Consensus 1 mkmittfdryakstqkeytamq-~~~ied~~ip~v--~~fi~~ytg~dfeaeg~efP~~YeIIA~rlV~yhl~~e~e-dv 76 (121) .-.|+..+-+--. +| ++ |+- ++|-..|-| --+||.+---=++-|+.|--+.-++ +| T Consensus 78 l~~ie~ie~~~~~-------~~v~~-------~vrd~~n~~~~~~~------kV~YP~Di~~Gv~~Lle~D~~~~~k~GV 137 (178) T protein:vir:78 78 IYLIESIEASNNT-------VQLNK-------SVRDTDENPDGYFG------LVMYPEDLLGGAYSLIEYDQQGRQEYGV 137 (178) T ss_pred eeEEEEeecccce-------eeecc-------ccccccccccceee------eeechhhHHHHHHHHHHHHhccCcccce Confidence 1222222211111 11 11 221 245455544 3578988877778888887666554 59 Q ss_pred hhhcccceeeeeCc------cccchHHHHHHHHHhhcCcce Q lcl|NC_019912. 77 VSEQMGSYRVQYGP------EGIYPKTLLTGLSRRMRTPSV 111 (121) Q Consensus 77 kSE~lGsy~VtY~d------eg~YPk~llkGL~~RlRtpsv 111 (121) |||..--+||||=| ++-||++|++=|.+=++-+-- T Consensus 138 KqETiaR~S~TYfD~~~~es~~GYPa~l~~FL~~Ykk~~w~ 178 (178) T protein:vir:78 138 KQETVSRVSKTYYDTTEAESRFGYPAFMTEFLEPYMQGSWE 178 (178) T ss_pred eceeeeeeeeEEeecCcccccccchHHHHHHHHHhhcCCCC Confidence 99999999999964 578999999999876664433 No 54 >protein:vir:80967 Length: 131 # NCBI annotation: gp8 # Family: family:all:3882 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468394;genbank:gi:157324968;genbank:GeneID:5601402 Probab=27.49 E-value=1.1 Score=20.37 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=39.1 Q ss_pred Cccchhhhhhhhhh-hHHHHHHHHHHHHHHhHHHHHHHHhhhc-----cccccccccCCCCchhHHHHHHHhhhhc---- Q lcl|NC_019912. 1 MKMITTFDRYAKST-QKEYTAMQKEYIEDILIPVVTEFIVGYT-----GVDFEAEGREFPKSYEVVAFRLITYHLS---- 70 (121) Q Consensus 1 mkmittfdryakst-qkeytamq~~~ied~~ip~v~~fi~~yt-----g~dfeaeg~efP~~YeIIA~rlV~yhl~---- 70 (121) |--+ |++-|.... .+.. -+++ .+ -+++-....|..+| ++||+.....-|......+-.++.|.-. T Consensus 1 M~Y~-d~~~Y~~~y~G~~i--~e~~-F~-~l~~rAs~~ID~~T~~ri~~~~~d~~~~~~~~~vk~A~c~q~e~~~~~g~~ 75 (131) T protein:vir:80 1 MPYT-TLEFYTNEYAGEHL--EQDE-FA-KLLKHAERKIDSVTFYRIRKSGIEAFSEFIQHQIQLATCNQIEYFKEAGGT 75 (131) T ss_pred CCCC-CHHHHHHhhCCCCC--chhH-HH-HHHHHHHHHHHHHhcccccccccccCchhHHHHHHHHHHHHHHHHHHhhhh Confidence 4333 344443221 0000 0111 11 23333444444444 4455422211111111111112222111 Q ss_pred -c-ccccchhhcccceeeeeCccccchHHHHHH--------HHHhh-cCcceeeeccCCC Q lcl|NC_019912. 71 -G-EGADVVSEQMGSYRVQYGPEGIYPKTLLTG--------LSRRM-RTPSVRIRGRRPE 119 (121) Q Consensus 71 -~-e~edvkSE~lGsy~VtY~deg~YPk~llkG--------L~~Rl-Rtpsvrirgrrpe 119 (121) + ...+++||+.|+|||+|+. +.++..+. +..=| +| -..-||---. T Consensus 76 ~~~~~~~~~S~svG~~Svs~~~---~~~~~~~~~~~~~~~~a~~~L~~T-GLlyrGV~~~ 131 (131) T protein:vir:80 76 SELAVSKPDNVSIGRTSISDSN---FASTATSLNSGLVGSDVRSYLAHT-GLLYNGVGVR 131 (131) T ss_pred hhhcccccCeeeeCceEEeecc---ccchhhhhhhhhhHHHHHHHHhcc-CCeecCCCCC Confidence 1 2345899999999999974 22222222 22222 22 1222221111 No 55 >protein:vir:9576 Length: 131 # NCBI annotation: gp42 # Family: family:all:1271 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862881;genbank:gi:32469473;genbank:GeneID:1461318 Probab=26.20 E-value=2 Score=18.97 Aligned_cols=112 Identities=20% Similarity=0.272 Sum_probs=66.5 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhh---cccccc---ccccCCCCchhHHHHHHHhhhhc-c-c Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGY---TGVDFE---AEGREFPKSYEVVAFRLITYHLS-G-E 72 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~y---tg~dfe---aeg~efP~~YeIIA~rlV~yhl~-~-e 72 (121) |--..|-+-+.+.. ...+.-++..++ .||..+..+|+.= .|.+.. +....++..-..|+..+|..-|. + . T Consensus 1 m~~fAtv~D~~~rw-r~Lt~~E~~ra~-~LL~~As~~ir~~~p~~~~~l~~~~~~~~~~~~~~~~V~~~~V~Ral~~~~~ 78 (131) T protein:vir:95 1 MENFATVEDLKKLW-RALKFDEEKRAE-ALLEVVSHSLRVEAKKVGKDLDGLVATDPSFTMVVKSVTVDVVARTLMTSTD 78 (131) T ss_pred CCccCCHHHHHHHh-cCCCHHHHHHHH-HHHHHHHHHHHHhhhhccCCccccccCCccchHHHHHHHHHHHHHHhcCCCC Confidence 87778888887776 577777888888 8899999999742 223332 22233344444455555666653 2 2 Q ss_pred ccc--chhhcccce--eeeeC-ccc-cchHHHHHHHHHhhcC-----cceeeeccC Q lcl|NC_019912. 73 GAD--VVSEQMGSY--RVQYG-PEG-IYPKTLLTGLSRRMRT-----PSVRIRGRR 117 (121) Q Consensus 73 ~ed--vkSE~lGsy--~VtY~-deg-~YPk~llkGL~~RlRt-----psvrirgrr 117 (121) .++ -.|+.-|+| ++||. +.| -| |++..++||+= =++-|-|-. T Consensus 79 ~~G~tq~S~TaG~ys~S~t~~~p~g~ly---lt~~e~~~LGl~~~r~~~i~~~~~~ 131 (131) T protein:vir:95 79 QEPMTQVAESALGYSFSGSYLVPGGGLF---IKDSELKRLGLKKQRYGVIDIYGTD 131 (131) T ss_pred CCCceeeeeecccceeeeeeecCCCCce---eChHHHHHhCCCCCceeEEeeccCC Confidence 244 467999999 78888 433 33 44455555532 122222222 No 56 >protein:vir:10365 Length: 115 # NCBI annotation: conserved phage protein # Family: family:all:363 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858957;genbank:gi:32128422;genbank:GeneID:2648387 Probab=25.91 E-value=0.65 Score=21.60 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=53.8 Q ss_pred cchhhhhhhhhhhHH--HHHHHHHHHHHHhHHHHHHHHhhhccccccccccCC----------------CCchhHHHHHH Q lcl|NC_019912. 3 MITTFDRYAKSTQKE--YTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGREF----------------PKSYEVVAFRL 64 (121) Q Consensus 3 mittfdryakstqke--ytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~ef----------------P~~YeIIA~rl 64 (121) ||| .+.-...-.-+ ...-.|++|+ .+|.-..+++..|+|..|-....+. |++. ..|.+| T Consensus 1 mvt-Le~~K~hLRid~~d~d~dD~li~-~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i-~~AiLL 77 (115) T protein:vir:10 1 MIT-LAMVQRHLQAELYEDDERDYVMQ-QLLPAARESAELFINRKLYDTQADMLADQAAGVDPAGQLLITRTV-EQAILL 77 (115) T ss_pred CCC-HHHHHHHcCCCCCCCchhhHHHH-HHHHHHHHHHHHHhCCcccccccccccccccccCCcccccCChHH-HHHHHH Confidence 654 44432222221 3445688999 8999999999999997764333332 3222 568888 Q ss_pred HhhhhccccccchhhcccceeeeeCccccchHHHHHHHHHhhcCccee Q lcl|NC_019912. 65 ITYHLSGEGADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSVR 112 (121) Q Consensus 65 V~yhl~~e~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRtpsvr 112 (121) +--|+...+|.+....+. .+-++ =++|+.-+|+ -|-|| T Consensus 78 lvg~~Y~nRe~~~~~~~~--elP~~-----v~~LL~pyR~---~~gv~ 115 (115) T protein:vir:10 78 TVGEWYANREQVWVKGVG--LVTSS-----AQNLLHPYRK---FAGVR 115 (115) T ss_pred HHHHHHhcchhcccchhh--hcCHH-----HHHHHHHHHh---cCCCC Confidence 888888888865432221 11111 1334443332 23333 No 57 >protein:vir:4512 Length: 107 # NCBI annotation: unknown # Family: family:all:363 # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599038;genbank:gi:19548996;genbank:GeneID:935218 Probab=24.59 E-value=2 Score=18.92 Aligned_cols=96 Identities=11% Similarity=0.179 Sum_probs=51.5 Q ss_pred cchhhhhhhhhhhHHHH-HHHHHHHHHHhHHHHHHHHhhhccccccccccC----------CCCchhHHHHHHHhhhhcc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYT-AMQKEYIEDILIPVVTEFIVGYTGVDFEAEGRE----------FPKSYEVVAFRLITYHLSG 71 (121) Q Consensus 3 mittfdryakstqkeyt-amq~~~ied~~ip~v~~fi~~ytg~dfeaeg~e----------fP~~YeIIA~rlV~yhl~~ 71 (121) |+.|.+.--..-.-+-. .-.|++|+ .+|.-..++|.+|+|..|.....+ +|+.... |..++.-|+.. T Consensus 1 M~vtL~e~K~hLRId~D~~ddD~lI~-~~i~AA~~~i~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-AvLllv~~~Y~ 78 (107) T protein:vir:45 1 MLLKMEEIKLQLRLDDDFSDEDELLE-LLGKAAQSRTENFLNRKLYATADDRPADDPDGLVISDDVKL-ALLLLVSHFYE 78 (107) T ss_pred CCCCHHHHHHHcCCCCCCchhHHHHH-HHHHHHHHHHHHHhccccccccccccccccccccCChhHHH-HHHHHHHHHHh Confidence 88888754332222111 12577888 899999999999999877543322 4555544 55555555666 Q ss_pred ccccchhhcccceeeeeCccccchHHHHHHHHHhhcCcce Q lcl|NC_019912. 72 EGADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSV 111 (121) Q Consensus 72 e~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRtpsv 111 (121) .++.+ ++. +...+-++ . ++|+.-+ |-=.| T Consensus 79 NRe~~-~~~-~~~~lp~~---v--~~Ll~~~----R~~~~ 107 (107) T protein:vir:45 79 NRSTV-TDV-EKMELPMS---F--NWLVAPY----RLIPL 107 (107) T ss_pred hhhhc-ccc-chhccchH---H--HHHHHHH----hhcCC Confidence 67654 321 22222111 0 3344333 32222 No 58 >protein:vir:100245 Length: 113 # NCBI annotation: gp74 # Family: family:all:363 # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355410;genbank:gi:77864700;genbank:GeneID:3725967 Probab=21.21 E-value=0.94 Score=20.74 Aligned_cols=96 Identities=17% Similarity=0.190 Sum_probs=52.5 Q ss_pred CccchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccc----------------ccCCCCchhHHHHHH Q lcl|NC_019912. 1 MKMITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFEAE----------------GREFPKSYEVVAFRL 64 (121) Q Consensus 1 mkmittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfeae----------------g~efP~~YeIIA~rl 64 (121) |.||| .+.-...-.-+.. -.|++|+ .+|.-..+.+..|+|..|-.. |...|++.. .|..+ T Consensus 1 M~~vt-Lee~K~hLRvd~d-~dD~lI~-~li~AA~~~ve~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~-~AvLl 76 (113) T protein:vir:10 1 MALVE-LKLALGFVRANAG-VEDDVVQ-MLLDAATQSAVDYLNRQVFETEDAMTTAIEAGTAGQNPMVVNAAIR-AAILK 76 (113) T ss_pred CCCCC-HHHHHHHcCCCCC-cchHHHH-HHHHHHHHHHHHHhCccccccccccccccccccccccccccChHHH-HHHHH Confidence 66554 4432222222222 3788998 899999999999999776322 222455554 56667 Q ss_pred HhhhhccccccchhhcccceeeeeCccccchHHHHHHHHHhhcC-cce Q lcl|NC_019912. 65 ITYHLSGEGADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRT-PSV 111 (121) Q Consensus 65 V~yhl~~e~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRt-psv 111 (121) +.-|+...||.+.-.++ .. =|.++ +-|=.-+|. |-| T Consensus 77 lv~~~Y~nRe~~~~~~~--~~--------lP~~v-~~Ll~~yR~~~g~ 113 (113) T protein:vir:10 77 ITAELYANREDTAFGPI--TE--------LPLNA-RALLRPHRIIPGV 113 (113) T ss_pred HHHHHHhhhhhhchhhh--hc--------cCHHH-HHHHHHhhhhcCC Confidence 77777777776433222 11 23222 222222333 444 No 59 >protein:vir:4831 Length: 105 # NCBI annotation: ORF27 # Family: family:all:734 # ACLAME annotation(s): phi:0000018 - phage genome packaging # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038328;genbank:gi:9634654;genbank:GeneID:1262588 Probab=20.94 E-value=1.3 Score=19.95 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=51.6 Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhhhcccccc-ccccCCCCchhHHHHHHHhhhhccccccchhhcc Q lcl|NC_019912. 3 MITTFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVGYTGVDFE-AEGREFPKSYEVVAFRLITYHLSGEGADVVSEQM 81 (121) Q Consensus 3 mittfdryakstqkeytamq~~~ied~~ip~v~~fi~~ytg~dfe-aeg~efP~~YeIIA~rlV~yhl~~e~edvkSE~l 81 (121) |+-|.+..-..-.-++. --+++|+ .+|--..++|.+++|.+-. .+...+|+.|.+ |..++.-|+...|+-+...+ T Consensus 1 M~vtLee~K~~LRID~d-ddD~lI~-~~i~aA~~yi~~~ig~~~~~~~~~~~~~~~~~-Avl~lv~~~YeNR~~~~~~~- 76 (105) T protein:vir:48 1 MSVSKTSIMQTLNLDET-DDTALIP-AYIESAKQYIINAVGSDSKFYDLENVQPLFDT-AVIALTSSYFTYRVALTDTV- 76 (105) T ss_pred CcccHHHHHHHcCCCCc-cchHHHH-HHHHHHHHHHHHhhCCCCccccccCCchHHHH-HHHHHHHHHHhhhhhccCcc- Confidence 77777653222111222 3677888 8889999999999998633 134456776654 55555667777775432111 Q ss_pred cceeeeeCccccchHHHHHHHHHhhcCcceeeeccCCCC Q lcl|NC_019912. 82 GSYRVQYGPEGIYPKTLLTGLSRRMRTPSVRIRGRRPEG 120 (121) Q Consensus 82 Gsy~VtY~deg~YPk~llkGL~~RlRtpsvrirgrrpeg 120 (121) .+.+.++ =.+|+.-||-...... --.-.| T Consensus 77 -~~~ip~~-----v~sli~~lR~~y~~~~----e~~~~g 105 (105) T protein:vir:48 77 -TYPINLT-----LNSIIGQLRGLYATYS----EVVANG 105 (105) T ss_pred -cchhhHH-----HHHHHHHHhhhhhhhh----hcccCC Confidence 1111111 0133333332221111 001112 No 60 >protein:vir:80389 Length: 172 # NCBI annotation: BcepGomrgp09 # Family: family:all:703 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210229;genbank:gi:146329921;genbank:GeneID:5123498 Probab=20.27 E-value=2.8 Score=18.13 Aligned_cols=110 Identities=22% Similarity=0.279 Sum_probs=51.9 Q ss_pred Cccch----------------hhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHHHhh----hccc--cccccccCCCCch- Q lcl|NC_019912. 1 MKMIT----------------TFDRYAKSTQKEYTAMQKEYIEDILIPVVTEFIVG----YTGV--DFEAEGREFPKSY- 57 (121) Q Consensus 1 mkmit----------------tfdryakstqkeytamq~~~ied~~ip~v~~fi~~----ytg~--dfeaeg~efP~~Y- 57 (121) |-+|. .+|.|+..---..++-| .|-.||- -..||-+ |.|- +- ....+||-.- T Consensus 1 Malived~~g~~~anSYvt~~~a~aY~~~rg~~~~~d~---~e~aL~~-A~dyid~~~~~f~G~r~~~-~Q~l~wPR~g~ 75 (172) T protein:vir:80 1 MALIVEDGTGKPDANTYAGADFVIAYAQARGVTVDADE---AERLILE-AMDYIESFRRRWKGERNTR-EQGLTWPRHDA 75 (172) T ss_pred CeeEeeCCCCCccccccccHHHHHHHHHHcCCCcCHHH---HHHHHHH-HHHHHhhccCccccccCCc-cccccccccCc Confidence 55542 34555543322223222 2434443 4445554 3332 11 1224455421 Q ss_pred --------------h-HHHHHHHhhhhccc--------cccchhhcccceeeeeCcc-------------ccch--HHHH Q lcl|NC_019912. 58 --------------E-VVAFRLITYHLSGE--------GADVVSEQMGSYRVQYGPE-------------GIYP--KTLL 99 (121) Q Consensus 58 --------------e-IIA~rlV~yhl~~e--------~edvkSE~lGsy~VtY~de-------------g~YP--k~ll 99 (121) + +-|-....+.+-.. +..|+||++|+-+|+|+.- ..|| +.|| T Consensus 76 ~~~g~~~~~~~IP~~v~~A~~elA~~~~~g~~~~~~~~~~~v~~ekVG~i~~eY~~~~~~~~~~~~~~~~~~~~~v~~LL 155 (172) T protein:vir:80 76 VVDGFVIPSDVIPKELQSAVAAAVIEQVNGFELQQSQDQWAVRIEKVDVIEVQYAAGGGGQSASANAPMKPTFPKIDALL 155 (172) T ss_pred ccCcccccccchhHHHHHHHHHHHHHHhcCCccCcCCCCceeeEEeccceEEeeecccCccccccccCCccchHHHHHHH Confidence 1 22333333332221 1238999999999999622 1133 4677 Q ss_pred HHHHHh-hcCcceeeec Q lcl|NC_019912. 100 TGLSRR-MRTPSVRIRG 115 (121) Q Consensus 100 kGL~~R-lRtpsvrirg 115 (121) .++-.. ==.+.+++|| T Consensus 156 ~p~l~~~gg~~~~~vrg 172 (172) T protein:vir:80 156 NPLLVGDGGLFLVAVRG 172 (172) T ss_pred hhhhcCCCCeeeeeecC Confidence 666333 2236788898 No 61 >protein:vir:486 Length: 107 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543093;swissprot:trembl:q8w626;genbank:gi:18249905;uniprot:Q8W626;genbank:GeneID:929692 Probab=20.06 E-value=1.1 Score=20.29 Aligned_cols=95 Identities=8% Similarity=0.129 Sum_probs=51.8 Q ss_pred cchhhhhhhhhhhHH--HHHHHHHHHHHHhHHHHHHHHhhhccccccccccC----------CCCchhHHHHHHHhhhhc Q lcl|NC_019912. 3 MITTFDRYAKSTQKE--YTAMQKEYIEDILIPVVTEFIVGYTGVDFEAEGRE----------FPKSYEVVAFRLITYHLS 70 (121) Q Consensus 3 mittfdryakstqke--ytamq~~~ied~~ip~v~~fi~~ytg~dfeaeg~e----------fP~~YeIIA~rlV~yhl~ 70 (121) ||.|.+.--..-.-+ ++ --|++|+ .+|.-..++|..|+|..+-....+ +|++.. .|..++.-|+- T Consensus 1 M~vtL~e~K~hLRid~D~~-ddD~li~-~~i~aA~~~i~~~~~r~l~~~~~~~~~~~~~~~~~~~~ik-~Avlllv~~~Y 77 (107) T protein:vir:48 1 MLLKEEEIKSHLRLDDGLY-SDGDFLK-LLAQAVQKRTETYLNRKLYAPEETIPEDDPDGMHLTDDVR-LAMLMLVSHFY 77 (107) T ss_pred CCCCHHHHHHHcCCCCCCc-hhHHHHH-HHHHHHHHHHHHHhccccccccccccccCccccccchhHH-HHHHHHHHHHH Confidence 888877543332221 11 1367888 889999999999999766433333 445444 46666666888 Q ss_pred cccccchhhcccceeeeeCccccchHHHHHHHHHhhcCcce Q lcl|NC_019912. 71 GEGADVVSEQMGSYRVQYGPEGIYPKTLLTGLSRRMRTPSV 111 (121) Q Consensus 71 ~e~edvkSE~lGsy~VtY~deg~YPk~llkGL~~RlRtpsv 111 (121) ..+|.+...+. ..+-++ =++|+.-+| -=+. T Consensus 78 ~NRe~v~~~~~--~~iP~~-----v~~LL~~yR----~~~l 107 (107) T protein:vir:48 78 ENRSTITDVEK--LETPMS-----FRWLAGPYR----IVPL 107 (107) T ss_pred hhhhhhccccc--cccCHH-----HHHHHHHhh----ccCC Confidence 88886533222 122111 123443332 1111 Done!