Query lcl|NC_019722.1_cdsid_YP_007112479.1 [gene=F861_gp39] [protein=hypothetical protein] [protein_id=YP_007112479.1] [location=2452..2700] Match_columns 82 No_of_seqs 2 out of 5 Neff 1.4 Searched_HMMs 1612 Date Thu Nov 7 16:39:56 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_3 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_3_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3419 Length: 68 # 97.7 1.5E-07 9.6E-11 57.9 5.7 67 5-82 1-67 (68) 2 protein:vir:388 Length: 68 # N 97.6 2.4E-07 1.5E-10 56.8 5.6 67 5-82 1-67 (68) 3 protein:vir:99452 Length: 651 53.6 0.31 0.00019 23.4 5.5 82 1-82 321-411 (651) 4 protein:vir:79544 Length: 70 # 50.0 0.44 0.00027 22.6 5.7 62 6-77 1-70 (70) 5 protein:vir:4156 Length: 542 # 40.9 0.72 0.00045 21.4 5.4 80 1-82 238-326 (542) 6 protein:vir:267 Length: 348 # 40.8 0.74 0.00046 21.3 5.4 81 1-82 207-294 (348) 7 protein:vir:8418 Length: 409 # 37.9 0.65 0.0004 21.6 4.7 75 1-82 214-292 (409) 8 protein:vir:9359 Length: 348 # 37.6 0.67 0.00041 21.5 4.7 75 1-82 151-229 (348) 9 protein:vir:3743 Length: 345 # 34.8 1 0.00063 20.5 5.2 82 1-82 211-298 (345) 10 protein:vir:79207 Length: 351 34.2 1 0.00065 20.5 5.2 81 1-82 216-303 (351) 11 protein:vir:79150 Length: 368 33.8 1.3 0.00081 19.9 5.6 81 1-82 224-311 (368) 12 protein:vir:189 Length: 424 # 33.5 0.86 0.00053 20.9 4.6 77 1-82 230-310 (424) 13 protein:vir:4454 Length: 414 # 33.2 0.85 0.00053 21.0 4.5 77 1-82 214-295 (414) 14 protein:vir:98567 Length: 340 32.2 1.1 0.00071 20.3 5.0 81 1-82 208-295 (340) 15 protein:vir:103971 Length: 376 32.2 1.2 0.00074 20.2 5.1 82 1-82 241-328 (376) 16 protein:vir:6383 Length: 76 # 31.7 0.4 0.00025 22.8 2.4 68 1-76 2-76 (76) 17 protein:vir:78749 Length: 337 30.9 1.5 0.00096 19.6 5.6 81 1-82 202-290 (337) 18 protein:vir:102118 Length: 409 30.0 1.1 0.00068 20.4 4.5 75 1-82 216-297 (409) 19 protein:vir:94426 Length: 409 29.2 1.2 0.00075 20.1 4.6 75 1-82 212-290 (409) 20 protein:vir:483 Length: 413 # 28.7 1.2 0.00076 20.1 4.6 75 1-82 213-294 (413) 21 protein:vir:1884 Length: 424 # 28.4 1.3 0.0008 20.0 4.6 77 1-82 230-310 (424) 22 protein:vir:6240 Length: 457 # 28.4 1.3 0.00078 20.0 4.6 74 1-82 228-309 (457) 23 protein:vir:2683 Length: 412 # 28.1 1.3 0.00083 19.9 4.6 75 1-82 215-293 (412) 24 protein:vir:95599 Length: 563 28.0 1.8 0.0011 19.2 5.3 75 1-82 295-377 (563) 25 protein:vir:99312 Length: 563 28.0 1.8 0.0011 19.2 5.3 75 1-82 295-377 (563) 26 protein:vir:100328 Length: 346 28.0 1.8 0.0011 19.2 5.3 81 1-82 213-300 (346) 27 protein:vir:4337 Length: 434 # 27.4 1.2 0.00073 20.2 4.2 77 1-82 227-309 (434) 28 protein:vir:93610 Length: 454 27.4 1.3 0.00083 19.9 4.5 77 1-82 226-306 (454) 29 protein:vir:78191 Length: 351 27.3 1.7 0.0011 19.3 5.1 81 1-82 216-303 (351) 30 protein:vir:78641 Length: 278 26.2 1.5 0.00092 19.7 4.5 75 1-82 151-229 (278) 31 protein:vir:2013 Length: 344 # 25.1 2.1 0.0013 18.8 5.1 81 1-82 211-298 (344) 32 protein:vir:3868 Length: 417 # 24.5 1.4 0.00086 19.8 4.0 75 1-82 209-287 (417) 33 protein:vir:7853 Length: 518 # 23.4 2.1 0.0013 18.9 4.8 75 1-82 222-303 (518) 34 protein:vir:101648 Length: 518 23.3 2 0.0013 18.9 4.7 75 1-82 222-303 (518) 35 protein:vir:1643 Length: 111 # 23.1 0.62 0.00038 21.7 1.8 57 1-82 54-111 (111) 36 protein:vir:3780 Length: 345 # 21.7 2.6 0.0016 18.4 5.1 81 1-82 211-298 (345) 37 protein:vir:107605 Length: 432 21.5 2.2 0.0014 18.7 4.6 75 1-82 227-308 (432) 38 protein:vir:105002 Length: 432 21.5 2.2 0.0014 18.7 4.6 75 1-82 227-308 (432) 39 protein:vir:102855 Length: 432 21.5 2.2 0.0014 18.7 4.6 75 1-82 227-308 (432) 40 protein:vir:100691 Length: 535 21.0 2.4 0.0015 18.5 4.7 75 1-82 282-364 (535) 41 protein:vir:1266 Length: 416 # 20.6 2.6 0.0016 18.3 4.7 74 1-82 216-293 (416) 42 protein:vir:1326 Length: 457 # 20.4 2.5 0.0016 18.4 4.6 77 1-82 228-309 (457) 43 protein:vir:1380 Length: 422 # 20.2 2.5 0.0016 18.4 4.5 75 1-82 226-307 (422) 44 protein:vir:5691 Length: 344 # 20.0 2.8 0.0018 18.1 5.1 81 1-82 211-298 (344) No 1 >protein:vir:3419 Length: 68 # NCBI annotation: head-tail joining protein # Family: family:all:1709 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040582;genbank:gi:9626246;genbank:GeneID:2703525 Probab=97.71 E-value=1.5e-07 Score=57.93 Aligned_cols=67 Identities=27% Similarity=0.480 Sum_probs=58.4 Q ss_pred ccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcHHHHHHHHHHHHhhhhhccceeeeEEeccCCCC Q lcl|NC_019722. 5 LWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLPQLRKLRREMEAEIAAAQGVESVSVVASSKGLY 82 (82) Q Consensus 5 l~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLPqLR~L~R~~~a~i~~~~~~~~~~~~~s~KGLy 82 (82) .-+.|.|++.++|.-+|-+|++|+.|+++| ++++|.+-+++.||+--.++++.|....++-. .-|.| T Consensus 1 M~~~~~L~eAr~AlH~LltGk~Vv~v~~dG-----r~V~ys~Asi~~L~~YI~~Le~~LG~~~r~R~------Pagv~ 67 (68) T protein:vir:34 1 MTRQEELAAARAALHDLMTGKRVATVQKDG-----RRVEFTATSVSDLKKYIAELEVQTGMTQRRRG------PAGFY 67 (68) T ss_pred CcHHHHHHHHHHHHHHhhhcceeEEEeeCC-----cEEEeeecCHHHHHHHHHHHHHHhccCCCccC------ccccc Confidence 557899999999999999999999999999 99999999999999999999999988554332 33445 No 2 >protein:vir:388 Length: 68 # NCBI annotation: gp3 # Family: family:all:1709 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046898;genbank:gi:9630467;genbank:GeneID:1261642 Probab=97.62 E-value=2.4e-07 Score=56.84 Aligned_cols=67 Identities=22% Similarity=0.489 Sum_probs=58.3 Q ss_pred ccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcHHHHHHHHHHHHhhhhhccceeeeEEeccCCCC Q lcl|NC_019722. 5 LWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLPQLRKLRREMEAEIAAAQGVESVSVVASSKGLY 82 (82) Q Consensus 5 l~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLPqLR~L~R~~~a~i~~~~~~~~~~~~~s~KGLy 82 (82) .-+.+.|.|.++|.-+|-+|++|+.|+++| ++++|.+-|++.||+--.++++.|....++.+ .-|.| T Consensus 1 M~~~~~L~eAr~AlH~LltG~~Vvsv~~dG-----r~V~ys~Asi~~L~~YI~~Le~~LG~~~rrR~------PaGv~ 67 (68) T protein:vir:38 1 MATQTELDAARAALHDLMMGKRVATVQKDG-----RRVEFTATSVSDLKKYIADLESQVGTTSRRRG------PAGFY 67 (68) T ss_pred CcHHHHHHHHHHHHHHhhhCceeEEEeeCC-----cEEEeeecCHHHHHHHHHHHHHHhccCCCccC------ccccc Confidence 557899999999999999999999999999 99999999999999999999999987554332 33555 No 3 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=53.62 E-value=0.31 Score=23.38 Aligned_cols=82 Identities=17% Similarity=0.213 Sum_probs=55.6 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCc-eeeeeee---cccCcccccccccccCc-----HHHHHHHHHHHHhhhhhcccee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGK-RLVRVSF---SGINGSNQTNEYAPVDL-----PQLRKLRREMEAEIAAAQGVES 71 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~-R~~Rvs~---~Gingsn~T~eY~~VDL-----PqLR~L~R~~~a~i~~~~~~~~ 71 (82) +....+++|+.+.+|+.+++..-|+ ++.=+.. .++.+.+...+|-|+++ .|+..++.-...+|+.+-|+.. T Consensus 321 ~~~~~ls~e~~~~lr~~~~~~~~nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~afgVPp 400 (651) T protein:vir:99 321 VTGGELSEESKRDLRQMLNGLREESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKVLEVPP 400 (651) T ss_pred ecCCCCCHHHHHHHHHHHHHHhccCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHHhCCCH Confidence 4556789999999999999865443 2222222 22333344567766653 4678888888999999999987 Q ss_pred eeEEeccCCCC Q lcl|NC_019722. 72 VSVVASSKGLY 82 (82) Q Consensus 72 ~~~~~s~KGLy 82 (82) .-+-.+.++=| T Consensus 401 ~~lG~~~~~~~ 411 (651) T protein:vir:99 401 VKIGVTDSANR 411 (651) T ss_pred HHhccCCCCCc Confidence 66666666656 No 4 >protein:vir:79544 Length: 70 # NCBI annotation: hypothetical protein # Family: family:all:1547 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272516;genbank:gi:148609385;genbank:GeneID:5204380 Probab=49.96 E-value=0.44 Score=22.55 Aligned_cols=62 Identities=24% Similarity=0.294 Sum_probs=42.7 Q ss_pred cCHHHHHHH----HHHHHhhhcCceeeeeeecccCcccccccccccCcHHHHHHHHHHHHhhhhhccc----eeeeEEec Q lcl|NC_019722. 6 WTPEDLAEV----KRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLPQLRKLRREMEAEIAAAQGV----ESVSVVAS 77 (82) Q Consensus 6 ~T~E~LAeV----k~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLPqLR~L~R~~~a~i~~~~~~----~~~~~~~s 77 (82) .|-|++.+. ..|=.++..||- +||+| |+. .-.||+++||=+++.+..+++..++ .+.+++=- T Consensus 1 mt~e~~~~ml~~yleAE~avl~GkS---~ti~g-----r~l--Tre~LseIRkgr~~We~rl~~~~~~r~g~~~~kvarF 70 (70) T protein:vir:79 1 MNQNDIEAMIQRYTEAEMAVLDGKS---VTFNG-----QQM--TMENLSEIRQGRQEWERRLAALITRRRGHPGYRLARF 70 (70) T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCc---eeeCC-----eee--cccCHHHHHHHHHHHHHHHHHHhcccCCCCCcccccC Confidence 677776554 456667889986 56777 554 3469999999999999999887743 22222211 No 5 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=40.94 E-value=0.72 Score=21.37 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=49.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcC-----ceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhcccee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIG-----KRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVES 71 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G-----~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~ 71 (82) ..+.-+++|++..+|+.+.+.-.| .++.-+...| +.....+|-|+.+. ++...+.-...+|+.+-|+.. T Consensus 238 ~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~--~~~~g~~~~pl~~~~~d~qfle~~~~~~~~Ia~afgVPp 315 (542) T protein:vir:41 238 EEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPG--GDTVKVTFTPLNTSQKELSFREYAAEKKYDIAAAHMIDP 315 (542) T ss_pred ccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccC--CcccceeEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCH Confidence 234567899999999999875322 2333333322 22233456555442 566677777888999999887 Q ss_pred eeEEeccCCCC Q lcl|NC_019722. 72 VSVVASSKGLY 82 (82) Q Consensus 72 ~~~~~s~KGLy 82 (82) .-+-.+.++-| T Consensus 316 ~~lG~~~~~t~ 326 (542) T protein:vir:41 316 YRLGIADTGPL 326 (542) T ss_pred HHhCcCCCccc Confidence 66655544444 No 6 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=40.77 E-value=0.74 Score=21.31 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=53.0 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCcee-eeeeecccCcccccccccccCc----HHHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRL-VRVSFSGINGSNQTNEYAPVDL----PQLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~-~Rvs~~Gingsn~T~eY~~VDL----PqLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) |+..-+++||...+|+++++- .|..= -.+-...-+|...-.+|-|+.. -++...+.--..+|+++-|+-..-+- T Consensus 207 ~~~~~ls~e~~~~lk~~~~~~-~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llG 285 (348) T protein:vir:26 207 ATDPNLSEADEKALKEKIASS-KGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGG 285 (348) T ss_pred ecCCCCCHHHHHHHHHHHHHh-cCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHcc Confidence 677789999999999999985 44321 1111122234445567888743 35777777778899999998866543 Q ss_pred --eccCCCC Q lcl|NC_019722. 76 --ASSKGLY 82 (82) Q Consensus 76 --~s~KGLy 82 (82) -++.|-| T Consensus 286 i~~~~~~~~ 294 (348) T protein:vir:26 286 MLPQQGANV 294 (348) T ss_pred ccCCCCCcc Confidence 2445555 No 7 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=37.91 E-value=0.65 Score=21.61 Aligned_cols=75 Identities=19% Similarity=0.195 Sum_probs=48.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ..+.-+++|+.+++++.+.+..-++.-+-|.-.| .+|-+++++ |+...++-...+|+.+-|+...-+-. T Consensus 214 ~~~~~l~~e~~~~~~~~~~~~~~n~g~~~vl~~g-------~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~ 286 (409) T protein:vir:84 214 SSDADLTPDQVKQTQKQWIQSHHNRRLPAVMSAG-------IKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGD 286 (409) T ss_pred ecCCCCCHHHHHHHHHHHHHHhccCCCeeecCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 3456689999999999988765554333333333 356666553 56666777788999999987665533 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) ..++=+ T Consensus 287 ~~~~~~ 292 (409) T protein:vir:84 287 VEKSTS 292 (409) T ss_pred CCCccc Confidence 333322 No 8 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=37.63 E-value=0.67 Score=21.55 Aligned_cols=75 Identities=13% Similarity=0.028 Sum_probs=47.8 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ...+.+++|+...+++++++.--+.-=+-|.- ...+|-+++++ |+-..++-...+|+.+-|+...-+-. T Consensus 151 ~~~~~l~~e~~~~~~~~~~~~~~n~~~~~vl~-------~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~ 223 (348) T protein:vir:93 151 KYGSNVSTEKRQQVLEDFKQYYEENGGILFQE-------PGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNA 223 (348) T ss_pred ecCCCCCHHHHHHHHHHHHHHhhcCCCeeecC-------CCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 56778899999999999987543321111221 22445555543 66677777888899999987655544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) ..++-| T Consensus 224 ~~~~~~ 229 (348) T protein:vir:93 224 RSNTNF 229 (348) T ss_pred CCCCCc Confidence 444444 No 9 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=34.81 E-value=1 Score=20.53 Aligned_cols=82 Identities=12% Similarity=0.071 Sum_probs=51.2 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ++..-.++||...+|+++++..-|..--.+-....+|..-..+|-|+... |+..++.-...+|+++-|+-..-+-. T Consensus 211 ~t~~~l~~e~~~~lk~~~~~~~g~~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi 290 (345) T protein:vir:37 211 STDPDLTEEMEEEIARKISESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGI 290 (345) T ss_pred eCCCCCCHHHHHHHHHHHHHhcCccccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcc Confidence 56667899999999999998643322111112222344445677777553 56677777888999999887654422 Q ss_pred --ccCCCC Q lcl|NC_019722. 77 --SSKGLY 82 (82) Q Consensus 77 --s~KGLy 82 (82) ++.|-| T Consensus 291 ~~~~t~~~ 298 (345) T protein:vir:37 291 IPTNTGGL 298 (345) T ss_pred ccCCCCCc Confidence 222334 No 10 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=34.20 E-value=1 Score=20.47 Aligned_cols=81 Identities=16% Similarity=0.255 Sum_probs=53.3 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCc-eeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGK-RLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~-R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +...-+++||...+|+++++. .|. .--++-..+.+|..--.+|-|+.+. ++...+.-...+|+++-|+-..-+- T Consensus 216 ~~~~~ls~e~~~~lk~~~~~~-~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~VPp~llG 294 (351) T protein:vir:79 216 MTDAAQKQDDVDNMRDALKNA-KGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLG 294 (351) T ss_pred ecCCCCCHHHHHHHHHHHHHh-cCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhc Confidence 555678999999999999985 342 2223333444555556677777654 4667777788899999998866553 Q ss_pred ec--cCCCC Q lcl|NC_019722. 76 AS--SKGLY 82 (82) Q Consensus 76 ~s--~KGLy 82 (82) .. +.|-| T Consensus 295 i~~~~t~~~ 303 (351) T protein:vir:79 295 IVPSNSGGF 303 (351) T ss_pred ccCCCCCCc Confidence 32 22334 No 11 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=33.78 E-value=1.3 Score=19.95 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=50.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) ++..-+++||...+|+++++- .|.. --++-..+-+|...-.+|-|+... |+...+.-...+|+++-||-..-+- T Consensus 224 ~~~~~l~~e~~~~lk~~~~~~-~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llG 302 (368) T protein:vir:79 224 MTDAAQKQEDVDTLREAMKSA-KGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMG 302 (368) T ss_pred eCCCCCCHHHHHHHHHHHHHh-cCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcc Confidence 555678999999999999984 3321 111222223344445567776653 4566777788899999998766554 Q ss_pred eccC--CCC Q lcl|NC_019722. 76 ASSK--GLY 82 (82) Q Consensus 76 ~s~K--GLy 82 (82) ...+ |-| T Consensus 303 i~~~~t~~~ 311 (368) T protein:vir:79 303 IIPNNTGGF 311 (368) T ss_pred ccCCCCCcc Confidence 3332 224 No 12 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=33.53 E-value=0.86 Score=20.94 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=48.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) +.....++|+..++|+.+++.--|..--++-.-. ...+|-+++++ |+...+.-...+|+.+-|+.-.-+-. T Consensus 230 ~~~~~l~~e~~~~~~~~~~~~~~~~nag~~~vl~-----~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~ 304 (424) T protein:vir:18 230 TGEKVLTEQQRSQVEENFKEIAGGPVKKRLWILE-----AGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGD 304 (424) T ss_pred eCCcCCCHHHHHHHHHHHHHHhCCcccCCceecc-----CCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCC Confidence 4456679999999999999875443211111111 23455555443 66777778888999999987555544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) +.++=| T Consensus 305 ~~~~t~ 310 (424) T protein:vir:18 305 VEKSTS 310 (424) T ss_pred CCCccc Confidence 444433 No 13 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=33.19 E-value=0.85 Score=20.97 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=48.4 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) ..+..+++|+..++++.+.+.-.|.. --++-+-+ ...+|-+++++ |+-..+.-...+|+.+-|+...-+- T Consensus 214 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~ 288 (414) T protein:vir:44 214 RTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILE-----MGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQ 288 (414) T ss_pred EeCCCCCHHHHHHHHHHHHHHhcCccccCcceecC-----CCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhC Confidence 34456799999999999987654421 11111111 22456676654 5556666677889999888776665 Q ss_pred eccCCCC Q lcl|NC_019722. 76 ASSKGLY 82 (82) Q Consensus 76 ~s~KGLy 82 (82) .+.++=| T Consensus 289 ~~~~~t~ 295 (414) T protein:vir:44 289 NTDRATF 295 (414) T ss_pred CCCCCCc Confidence 5555555 No 14 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=32.24 E-value=1.1 Score=20.28 Aligned_cols=81 Identities=14% Similarity=0.221 Sum_probs=53.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +...-.++||...+|+++++- .|.. --++-....+|..--.+|-|+... |+..++.-...+|+++-|+-..-+- T Consensus 208 ~~~~~ls~e~~~~lk~~~~~~-~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llG 286 (340) T protein:vir:98 208 VTDPAQSATDVESLRDAMRNS-KGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMG 286 (340) T ss_pred ecCCCCCHHHHHHHHHHHHHh-cCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhc Confidence 555678999999999999984 4432 122333444455556788887653 5677788888899999998765553 Q ss_pred ec--cCCCC Q lcl|NC_019722. 76 AS--SKGLY 82 (82) Q Consensus 76 ~s--~KGLy 82 (82) .. +.|=| T Consensus 287 i~~~~t~~~ 295 (340) T protein:vir:98 287 GKPENIGSL 295 (340) T ss_pred ccCCCCCcc Confidence 32 22223 No 15 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=32.23 E-value=1.2 Score=20.15 Aligned_cols=82 Identities=15% Similarity=0.204 Sum_probs=49.9 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ++..-+++||...+|+++++..-...--++-..+-+|..--.+|-|+... |+...+.-...+|+++-|+-..-+-. T Consensus 241 ~~d~~l~~e~~~~lr~~~~~~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi 320 (376) T protein:vir:10 241 MTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGI 320 (376) T ss_pred ecCCCCCHHHHHHHHHHHHHhcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHhcc Confidence 55567899999999999998532111112222333344444567666542 56667777778899999887665433 Q ss_pred ccC--CCC Q lcl|NC_019722. 77 SSK--GLY 82 (82) Q Consensus 77 s~K--GLy 82 (82) ..+ +-| T Consensus 321 ~~~~t~~~ 328 (376) T protein:vir:10 321 VPSNSGGF 328 (376) T ss_pred cCCCCCCc Confidence 222 224 No 16 >protein:vir:6383 Length: 76 # NCBI annotation: head-tail joining protein Lambda W # Family: family:all:29422 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918996;genbank:gi:34610171;genbank:GeneID:2559595 Probab=31.66 E-value=0.4 Score=22.75 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=48.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeee-eecccCcccccccccccCcHHHHHHHHHHHHhhhhh------ccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRV-SFSGINGSNQTNEYAPVDLPQLRKLRREMEAEIAAA------QGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rv-s~~Gingsn~T~eY~~VDLPqLR~L~R~~~a~i~~~------~~~~~~~ 73 (82) |...--|. ..-|.|.-+|=+|++|++| --|| .+++|.--.-..|-+--+.+||++.++ ..+--.+ T Consensus 2 ~~~~~~~~---~~~R~A~H~LmtGkav~~iV~qnG-----~rVeft~an~q~L~~Yi~~Leaq~g~~~~~gt~r~rGPl~ 73 (76) T protein:vir:63 2 MQPAGSTS---RRRRDAYHKLLTGRSARVIVDQNG-----ERVEFTAANQQALVTYIRQLEAQCGDCGPCGGGRSNGPLQ 73 (76) T ss_pred CCCCccch---hhHHHHHHHhhhhHHHHHHHhcCC-----CEEeeehhcHHHHHHHHHHHHHhhccccccCCCcccCccc Confidence 32222221 3457799999999999987 8899 999999998888999999999999852 2222222 Q ss_pred EEe Q lcl|NC_019722. 74 VVA 76 (82) Q Consensus 74 ~~~ 76 (82) +-| T Consensus 74 F~~ 76 (76) T protein:vir:63 74 FTF 76 (76) T ss_pred ccC Confidence 222 No 17 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=30.88 E-value=1.5 Score=19.55 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=51.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCc-eeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGK-RLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~-R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) |.+.-+++||...+|+++++- .|. .--++-....+|..-..+|-|+... |+...+.--..+|+++-|+...-+- T Consensus 202 ~~~~~l~~e~~~~lk~~~~~~-~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llG 280 (337) T protein:vir:78 202 ATDPNMDDDTEEEMKEMIANS-KGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAG 280 (337) T ss_pred cCCCCCCHHHHHHHHHHHHHh-cCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcc Confidence 677789999999999999884 332 1122223333444455677776543 4666777777889999998765442 Q ss_pred --ecc-CCCC Q lcl|NC_019722. 76 --ASS-KGLY 82 (82) Q Consensus 76 --~s~-KGLy 82 (82) -++ .|=| T Consensus 281 i~~~~~~~~~ 290 (337) T protein:vir:78 281 IIPTNGGGGL 290 (337) T ss_pred cccCCCcCcc Confidence 333 3444 No 18 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=29.97 E-value=1.1 Score=20.36 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=51.0 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce---eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR---LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R---~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+..+.++.+.+.-.|.+ -+-|.-.| .+|-|++++ |+-..++-...+|+.+-|+...- T Consensus 216 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~ 288 (409) T protein:vir:10 216 QYAGDLNPEAEEVFKENFERMSSGLKNAHRIAMLPIG-------YKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQ 288 (409) T ss_pred EcCCCCCHHHHHHHHHHHHHHhccccccCCceecCCC-------ceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHH Confidence 34455899999999999998755532 11122222 456666653 67777788888999999998776 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.+.++-| T Consensus 289 lg~~~~~~~ 297 (409) T protein:vir:10 289 LNDLDRATH 297 (409) T ss_pred cCCCCCCcc Confidence 665666666 No 19 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=29.25 E-value=1.2 Score=20.12 Aligned_cols=75 Identities=15% Similarity=0.018 Sum_probs=48.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ...+..++|+.+.+++++++..-++-=+-|.-. ..+|-|+++. |+-..+.-...+|+.+-|+...-+-. T Consensus 212 ~~~~~l~~e~~~~~~~~~~~~~~~~g~~~vl~~-------g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~ 284 (409) T protein:vir:94 212 KYGSNVGKEKRQQVLEDFKQYYEENGGILFQEP-------GVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNA 284 (409) T ss_pred ecCCCCCHHHHHHHHHHHHHHhhcCCCeeecCC-------CceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 466778999999999999975433211122222 3466666654 56666676778899999987655544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) ..++-| T Consensus 285 ~~~~~~ 290 (409) T protein:vir:94 285 RSNTNF 290 (409) T ss_pred CCCCCc Confidence 444444 No 20 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=28.73 E-value=1.2 Score=20.11 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=48.3 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eee--eeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVR--VSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~R--vs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ..+.-+++|+..++++++++.-.|.. --+ |.-.| .+|-++++. |+-..++-...+|+.+-|+...- T Consensus 213 ~~~~~~~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~ 285 (413) T protein:vir:48 213 RTEQKLTPDAYERLKKDFEERHTGLGNAHRPMILEMG-------LDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHM 285 (413) T ss_pred EeCCCCCHHHHHHHHHHHHHHhcCccccCcceecCCC-------ceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 34455799999999999998755532 111 22222 355555542 55666777788899999987766 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.+.++-| T Consensus 286 lg~~~~~t~ 294 (413) T protein:vir:48 286 VQNTDRATF 294 (413) T ss_pred hCCCcCCCc Confidence 655555555 No 21 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=28.42 E-value=1.3 Score=19.99 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=48.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) +.....++|+..++|+.+++.-.|..--++-.-. ...+|-+++++ |+-..+.-...+|+.+-|+...-+-. T Consensus 230 ~~~~~l~~e~~~~~~~~~~~~~~g~nag~~~vl~-----~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~ 304 (424) T protein:vir:18 230 TGEKVLTEQQRSQVEENFKEIAGGPVKKRLWILE-----AGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGD 304 (424) T ss_pred eCCcCCCHHHHHHHHHHHHHHhCCcccCCceecc-----CCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 4455679999999999998875443322222221 22455555543 56666777788899999987655544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) .+++=| T Consensus 305 ~~~~t~ 310 (424) T protein:vir:18 305 VEKSTS 310 (424) T ss_pred CCCccc Confidence 444433 No 22 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=28.38 E-value=1.3 Score=20.03 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=47.3 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce----eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR----LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESV 72 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R----~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~ 72 (82) ....-+|+|+..++|+.+.+.-.|.. +.=+ - ...+|-++.+. |+...+.-...+|+.+-|+... T Consensus 228 ~~~~~ls~e~~~~~~~~~~~~~~G~~nag~~~vl-~-------~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~ 299 (457) T protein:vir:62 228 EVPGTMSEEGLARAREAWRAANSGVDNAHRVALL-T-------EGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPH 299 (457) T ss_pred EcCCCCCHHHHHHHHHHHHHHhcCccccCcceec-C-------CCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 33456799999999999998744421 2111 1 12355555543 5666667778889999998776 Q ss_pred eEEeccCCCC Q lcl|NC_019722. 73 SVVASSKGLY 82 (82) Q Consensus 73 ~~~~s~KGLy 82 (82) -+-.+.++-| T Consensus 300 ~lg~~~~~~~ 309 (457) T protein:vir:62 300 LISDATNSTS 309 (457) T ss_pred HcCCCCCccc Confidence 5544555443 No 23 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=28.05 E-value=1.3 Score=19.89 Aligned_cols=75 Identities=15% Similarity=0.015 Sum_probs=47.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ...+..++|+...+++++++..-++-=+-|.- .-.+|-|+++. |+...+.-...+|+.+-|+...-+-. T Consensus 215 ~~~~~l~~e~~~~~~~~~~~~~~~~g~~~vl~-------~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~ 287 (412) T protein:vir:26 215 KYGSNVGKEKRQQVLEDFKQYYEENGGILFQE-------PGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNA 287 (412) T ss_pred ecCCCCCHHHHHHHHHHHHHHhhcCCCeeecC-------CCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 45667899999999999987543321111222 22456666553 56666666778899999987655544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) .+++-| T Consensus 288 ~~~~~~ 293 (412) T protein:vir:26 288 RSNTNF 293 (412) T ss_pred CCCCCc Confidence 444444 No 24 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=28.01 E-value=1.8 Score=19.25 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=49.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCc----eeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGK----RLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESV 72 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~----R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~ 72 (82) .+...+++|+..++|+++.+.-.|. ++.-|.-.| .+|-++.++ |+...++-...+|+.+-|+... T Consensus 295 ~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G-------~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPp~ 367 (563) T protein:vir:95 295 RSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADD-------IKFVNMTPTANDMQFEKWLNYLINIISALYGIDPA 367 (563) T ss_pred CCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCC-------ceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 2344589999999999999864432 222333333 467776654 5677778888899999998876 Q ss_pred eEEeccCCCC Q lcl|NC_019722. 73 SVVASSKGLY 82 (82) Q Consensus 73 ~~~~s~KGLy 82 (82) -+-...++=| T Consensus 368 ~lG~~~~~~~ 377 (563) T protein:vir:95 368 EIGFPNRGGA 377 (563) T ss_pred Hccccccccc Confidence 6655444322 No 25 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=28.01 E-value=1.8 Score=19.25 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=49.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCc----eeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGK----RLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESV 72 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~----R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~ 72 (82) .+...+++|+..++|+++.+.-.|. ++.-|.-.| .+|-++.++ |+...++-...+|+.+-|+... T Consensus 295 ~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G-------~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPp~ 367 (563) T protein:vir:99 295 RSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADD-------IKFVNMTPTANDMQFEKWLNYLINIISALYGIDPA 367 (563) T ss_pred CCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCC-------ceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 2344589999999999999864432 222333333 467776654 5677778888899999998876 Q ss_pred eEEeccCCCC Q lcl|NC_019722. 73 SVVASSKGLY 82 (82) Q Consensus 73 ~~~~s~KGLy 82 (82) -+-...++=| T Consensus 368 ~lG~~~~~~~ 377 (563) T protein:vir:99 368 EIGFPNRGGA 377 (563) T ss_pred Hccccccccc Confidence 6655444322 No 26 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=27.95 E-value=1.8 Score=19.19 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=51.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCc----HHHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDL----PQLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDL----PqLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +...-+++||...+|+++++. .|.. --.+-...-+|.....++-|+.. -++...+.-...+|+++-|+...-+- T Consensus 213 ~~d~~l~~e~~~~i~~~~~~~-~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG 291 (346) T protein:vir:10 213 MSDASQKQEDVENIRQQLKQS-KGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMG 291 (346) T ss_pred eCCCCCCHHHHHHHHHHHHHh-cCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhc Confidence 556678999999999999875 3432 11222233334555566777643 34666777888899999998776553 Q ss_pred ec--cCCCC Q lcl|NC_019722. 76 AS--SKGLY 82 (82) Q Consensus 76 ~s--~KGLy 82 (82) .. +.|-| T Consensus 292 ~~~~~~~~~ 300 (346) T protein:vir:10 292 IIPNNTGGF 300 (346) T ss_pred ccCCCCCCc Confidence 32 22334 No 27 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=27.39 E-value=1.2 Score=20.21 Aligned_cols=77 Identities=18% Similarity=0.133 Sum_probs=47.2 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) .....+++|+.++.|+.++....+..--++-+-. ...+|-++.+. |+-..++-...+|+.+-|+...-+-. T Consensus 227 ~~~~~l~~e~~~~~r~~~~~~~g~~nag~~~vl~-----~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~ 301 (434) T protein:vir:43 227 KVDRILQPAQREEFREYVKSVSGAMNSGRSPVLE-----QGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQ 301 (434) T ss_pred ecCCCCCHHHHHHHHHHHHHhcCccccCCccccC-----CCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 3455679999999999998865433322222111 23456666553 66677777888999999987554433 Q ss_pred ccCCC--C Q lcl|NC_019722. 77 SSKGL--Y 82 (82) Q Consensus 77 s~KGL--y 82 (82) +.++= | T Consensus 302 ~~~~~~~~ 309 (434) T protein:vir:43 302 TDKGSNWG 309 (434) T ss_pred CcCCcccc Confidence 33322 1 No 28 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=27.38 E-value=1.3 Score=19.89 Aligned_cols=77 Identities=10% Similarity=0.060 Sum_probs=47.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ....-+++|+..++|+++.+.--|..--++-.-. ...+|-++++. |+-..+.-...+|+.+-|+...-+-. T Consensus 226 ~~~~~l~~e~~~~~~~~~~~~~~g~n~g~~~vl~-----~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~ 300 (454) T protein:vir:93 226 EIPGSITEENAKKLKSNWDSGYTGENAGKTAILS-----NGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGV 300 (454) T ss_pred ecCCCCCHHHHHHHHHHHHHHhcccccCCceecc-----CCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCC Confidence 3445679999999999999875443211111111 12356655542 55566667778899998887665544 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) +.++-| T Consensus 301 ~~~~t~ 306 (454) T protein:vir:93 301 GQPPSS 306 (454) T ss_pred CCCCcc Confidence 445544 No 29 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=27.35 E-value=1.7 Score=19.32 Aligned_cols=81 Identities=16% Similarity=0.248 Sum_probs=50.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +...-+++||...+|+++++. .|.. --++-..+.+|..--.+|-|+... ++...+.-...+|+++-|+-..-+- T Consensus 216 ~~~~~ls~e~~~~lr~~~~~~-~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llG 294 (351) T protein:vir:78 216 MTDAAQKQDDVDNMRDALKNA-KGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLG 294 (351) T ss_pred ecCCCCCHHHHHHHHHHHHHh-cCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhc Confidence 556678999999999999885 3322 122223333444444567776653 4666777778889999998765553 Q ss_pred eccC--CCC Q lcl|NC_019722. 76 ASSK--GLY 82 (82) Q Consensus 76 ~s~K--GLy 82 (82) ...+ |=| T Consensus 295 i~~~~t~~~ 303 (351) T protein:vir:78 295 IVPSNSGGF 303 (351) T ss_pred ccCCCCCCc Confidence 3222 223 No 30 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=26.25 E-value=1.5 Score=19.66 Aligned_cols=75 Identities=16% Similarity=0.052 Sum_probs=46.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ....-.++|+..++++.+++..-+..-+-+.-.| .+|-+++++ ++...+.-...+|+.+-|+...-+-. T Consensus 151 ~~~~~l~~e~~~~~~~~~~~~~~~~g~~~vl~~g-------~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~ 223 (278) T protein:vir:78 151 KYGSNVGKEKRQQVLEDFKQYYEENGGILFQEPG-------VEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNA 223 (278) T ss_pred EeCCCCCHHHHHHHHHHHHHHhccCCCceecCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 5556688999999999988654333212232223 355555543 55666677788899999987655543 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) +..+=| T Consensus 224 ~~~~~~ 229 (278) T protein:vir:78 224 RSNTNF 229 (278) T ss_pred CCCCCc Confidence 333434 No 31 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=25.09 E-value=2.1 Score=18.83 Aligned_cols=81 Identities=9% Similarity=0.192 Sum_probs=50.8 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeee-eeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVR-VSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~R-vs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +...-+++||...+|+++++.. |.-=-| +-.+.-+|.....+|-|+... |+..++.--..+|+++-|+-..-+- T Consensus 211 ~~d~~l~~e~~~~ik~~~~~~~-g~~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llG 289 (344) T protein:vir:20 211 VTDAVQDRNDIEMLRENMVKSK-GRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMG 289 (344) T ss_pred ecCcCCCHHHHHHHHHHHHHhc-CCCCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhc Confidence 5556789999999999998853 221111 112333344455677776543 4667777788899999998765543 Q ss_pred e--ccCCCC Q lcl|NC_019722. 76 A--SSKGLY 82 (82) Q Consensus 76 ~--s~KGLy 82 (82) . ++-|-| T Consensus 290 i~~~~t~~~ 298 (344) T protein:vir:20 290 GKPENVGSL 298 (344) T ss_pred cCCCCCCcc Confidence 2 233334 No 32 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=24.49 E-value=1.4 Score=19.82 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=46.0 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) ..++-+++|+..++|+++++.-.|..--++-.-. ...+|-|++++ |+...+.-...+|+.+-|+...-+- T Consensus 209 ~~~~~l~~e~~~~~~~~~~~~~~g~n~g~~~vl~-----~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg- 282 (417) T protein:vir:38 209 AKESRLSAEARQKIREDFERAQAGADAGSPIIVD-----ATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLA- 282 (417) T ss_pred EeCCCCCHHHHHHHHHHHHHHhcccccCCceecc-----CCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhC- Confidence 5567789999999999998865553211111111 12356555543 5666777778889998888655442 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) ..+-| T Consensus 283 -~~~~~ 287 (417) T protein:vir:38 283 -QNSPN 287 (417) T ss_pred -CCCcc Confidence 22233 No 33 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=23.38 E-value=2.1 Score=18.86 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=48.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-e--eeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-L--VRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~--~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+.+++|+++.+.-.|.. - +-|--.| .+|-++.+. |+...++-...+|+.+-|+...- T Consensus 222 ~~~~~ls~e~~~~~k~~~~~~~~G~~nag~~~vL~~G-------~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~ 294 (518) T protein:vir:78 222 RHEKRLSPEAQQRLREQFDRAHAGSSNTGKTMVVEEG-------MEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPI 294 (518) T ss_pred ecCCCCCHHHHHHHHHHHHHHhcCcccCCceeEcCCC-------ceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 34566899999999999987644421 1 1122222 344444442 46667777778899999998766 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.++++=| T Consensus 295 lg~~~~st~ 303 (518) T protein:vir:78 295 VHILDRATF 303 (518) T ss_pred hccCCCCCc Confidence 666666656 No 34 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=23.28 E-value=2 Score=18.91 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=48.3 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-e--eeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-L--VRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~--~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+..++|+++++.-.|.. - +-|--.| .+|-++.+. |+...++-...+|+.+-|+...- T Consensus 222 ~~~~~ls~e~~~~~k~~~~~~~~G~~nag~v~vL~~G-------~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~ 294 (518) T protein:vir:10 222 RHEKRLSEAAQQRLREQFDRAHSGSSNTGKTMVVEEG-------MEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPI 294 (518) T ss_pred ecCCCCCHHHHHHHHHHHHHHhcCccccCcceEcCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 44566899999999999988655421 1 1121222 345544442 46666777778899999987766 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.++++=| T Consensus 295 lg~~~~~t~ 303 (518) T protein:vir:10 295 VHILDRATF 303 (518) T ss_pred hccCCCCCc Confidence 655556655 No 35 >protein:vir:1643 Length: 111 # NCBI annotation: hypothetical protein # Family: family:all:1269 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695064;genbank:gi:23455755;genbank:GeneID:955492 Probab=23.09 E-value=0.62 Score=21.72 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=34.9 Q ss_pred CCccccCHHHHHH-HHHHHHhhhcCceeeeeeecccCcccccccccccCcHHHHHHHHHHHHhhhhhccceeeeEEeccC Q lcl|NC_019722. 1 MSESLWTPEDLAE-VKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLPQLRKLRREMEAEIAAAQGVESVSVVASSK 79 (82) Q Consensus 1 msesl~T~E~LAe-Vk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLPqLR~L~R~~~a~i~~~~~~~~~~~~~s~K 79 (82) ..+|+|.+++||+ |++|+.+|-...++..+..+|...--. +.++.-|-..++.=. T Consensus 54 w~~S~~eAa~La~~v~~~l~~l~~~~~I~av~~~s~ynf~d------------------------~~tk~~RYQav~~i~ 109 (111) T protein:vir:16 54 YAPSMYEAAKLNEQLKEVVERLIELNEISNVSLNSDYNFTD------------------------TETKEYRYQAVFDIN 109 (111) T ss_pred cchhHHHHHHHHHHHHHHHhhccccccceeeecCCCCcCCC------------------------CCCCCceEEEEEEEe Confidence 7899999999985 899999999999999998888432110 111111111111100 Q ss_pred CCC Q lcl|NC_019722. 80 GLY 82 (82) Q Consensus 80 GLy 82 (82) = | T Consensus 110 ~-~ 111 (111) T protein:vir:16 110 H-Y 111 (111) T ss_pred e-C Confidence 0 0 No 36 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=21.74 E-value=2.6 Score=18.35 Aligned_cols=81 Identities=15% Similarity=0.137 Sum_probs=48.4 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) |+..-.++||...+|+++++-. |.. --.+-...-+|...-.+|-|+... |+..++.-...+|+++-|+...-+- T Consensus 211 ~~d~~l~~e~~~~lk~~~~~~~-g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llG 289 (345) T protein:vir:37 211 STDPDLTEEMEEEIARKISESK-GVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSG 289 (345) T ss_pred ecCCCCCHHHHHHHHHHHHHhc-CcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhC Confidence 5556789999999999998842 221 111111222333344577777542 4556666777889999988766542 Q ss_pred e--ccCCCC Q lcl|NC_019722. 76 A--SSKGLY 82 (82) Q Consensus 76 ~--s~KGLy 82 (82) . ++.+=| T Consensus 290 i~~~~~~~~ 298 (345) T protein:vir:37 290 IIPTNTGGL 298 (345) T ss_pred ccCCCCCCc Confidence 2 223333 No 37 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=21.48 E-value=2.2 Score=18.67 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=49.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce---eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR---LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R---~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+..++++++.+.-.|.. =+-|.-.| .+|-+++++ |+-..+.-...+|+.+-|+...- T Consensus 227 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~ 299 (432) T protein:vir:10 227 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVG-------YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQ 299 (432) T ss_pred EcCCCCCHHHHHHHHHHHHHHhcccccCCcceecCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 44566899999999999988644421 11222233 345566553 56666777788999999998777 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.+.+|=| T Consensus 300 lg~~~~~~~ 308 (432) T protein:vir:10 300 LNDLSKATL 308 (432) T ss_pred hCCCCCCCc Confidence 765666666 No 38 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=21.48 E-value=2.2 Score=18.67 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=49.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce---eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR---LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R---~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+..++++++.+.-.|.. =+-|.-.| .+|-+++++ |+-..+.-...+|+.+-|+...- T Consensus 227 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~ 299 (432) T protein:vir:10 227 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVG-------YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQ 299 (432) T ss_pred EcCCCCCHHHHHHHHHHHHHHhcccccCCcceecCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 44566899999999999988644421 11222233 345566553 56666777788999999998777 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.+.+|=| T Consensus 300 lg~~~~~~~ 308 (432) T protein:vir:10 300 LNDLSKATL 308 (432) T ss_pred hCCCCCCCc Confidence 765666666 No 39 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=21.48 E-value=2.2 Score=18.67 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=49.7 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce---eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR---LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R---~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ....-+++|+..++++++.+.-.|.. =+-|.-.| .+|-+++++ |+-..+.-...+|+.+-|+...- T Consensus 227 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~ 299 (432) T protein:vir:10 227 QYVGDLNEDAKKVFRENFESMSSGLQNSHRIALMPVG-------YQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQ 299 (432) T ss_pred EcCCCCCHHHHHHHHHHHHHHhcccccCCcceecCCC-------ceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 44566899999999999988644421 11222233 345566553 56666777788999999998777 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +-.+.+|=| T Consensus 300 lg~~~~~~~ 308 (432) T protein:vir:10 300 LNDLSKATL 308 (432) T ss_pred hCCCCCCCc Confidence 765666666 No 40 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=20.97 E-value=2.4 Score=18.45 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=47.6 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce---eeeeee-cccCcccccccccccCc----HHHHHHHHHHHHhhhhhccceee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR---LVRVSF-SGINGSNQTNEYAPVDL----PQLRKLRREMEAEIAAAQGVESV 72 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R---~~Rvs~-~Gingsn~T~eY~~VDL----PqLR~L~R~~~a~i~~~~~~~~~ 72 (82) ....-+++|+++.+|+.+.+.-.|.. -+-|-. .| .+|-++.+ -|+-..+.-...+|+.+-|+... T Consensus 282 ~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~~~g-------~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~ 354 (535) T protein:vir:10 282 DGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILAAKD-------AKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPE 354 (535) T ss_pred CCCcccCHHHHHHHHHHHHHHhcCcccccccccccCCC-------ceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 22345899999999999988644431 111111 23 23444433 25677777888999999999877 Q ss_pred eEEeccCCCC Q lcl|NC_019722. 73 SVVASSKGLY 82 (82) Q Consensus 73 ~~~~s~KGLy 82 (82) -+-.++++=| T Consensus 355 ~lG~~~~at~ 364 (535) T protein:vir:10 355 EINFPNNGGS 364 (535) T ss_pred HhccccCccc Confidence 7766665544 No 41 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=20.62 E-value=2.6 Score=18.31 Aligned_cols=74 Identities=15% Similarity=0.185 Sum_probs=47.1 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEEe Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVVA 76 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~~ 76 (82) .....+++|+..++++.+....-+.++. |--.| .+|-+++.. |+-..++-...+|+.+-|+.-.-+-. T Consensus 216 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~-vl~~g-------~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~ 287 (416) T protein:vir:12 216 KVPAFLDEKPKENVRKEWKRVNKVENIA-IIDYG-------LEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNE 287 (416) T ss_pred ecCCCCCHHHHHHHHHHHHHHhcCCCee-ecCCC-------ceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCC Confidence 3345689999999999998776554432 22222 345555543 56667777788899988886554433 Q ss_pred ccCCCC Q lcl|NC_019722. 77 SSKGLY 82 (82) Q Consensus 77 s~KGLy 82 (82) ..++=| T Consensus 288 ~~~~t~ 293 (416) T protein:vir:12 288 LDKATF 293 (416) T ss_pred ccCCCc Confidence 444444 No 42 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=20.44 E-value=2.5 Score=18.38 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=47.0 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-eeeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-LVRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) ....-+|+|+..++++++.+.-.|.. --++-.-. ...+|-++.+. |+-..+.-...+|+.+-|+...-+- T Consensus 228 ~~~~~ls~e~~~~~~~~~~~~~~g~~nag~~~vl~-----~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg 302 (457) T protein:vir:13 228 EVPGTMSEEGLARAREAWRAANSGVDNAHRVALLT-----EGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLIS 302 (457) T ss_pred EcCCCCCHHHHHHHHHHHHHHhcCccccCcceecC-----CCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcC Confidence 33456799999999999998754421 11111111 12455555443 4666677778899999998766554 Q ss_pred eccCCCC Q lcl|NC_019722. 76 ASSKGLY 82 (82) Q Consensus 76 ~s~KGLy 82 (82) .+.++-| T Consensus 303 ~~~~~~~ 309 (457) T protein:vir:13 303 DATNSTS 309 (457) T ss_pred CCCCccc Confidence 4444433 No 43 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=20.17 E-value=2.5 Score=18.39 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=47.6 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCce-e--eeeeecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeee Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKR-L--VRVSFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVS 73 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R-~--~Rvs~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~ 73 (82) ...+-+++|+..++++.+.+.--|.. - +-|--. ..+|-|+++. |+-..+.-...+|+.+-|+...- T Consensus 226 ~~~~~l~~e~~~~~~~~~~~~~~g~~n~~~~~vl~~-------g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~ 298 (422) T protein:vir:13 226 QYVGDLDEKAKKIFKKEFESMSNGLENAHSISLLPF-------GYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYH 298 (422) T ss_pred EeCCCCCHHHHHHHHHHHHHHhcCccccCCceecCC-------CceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHH Confidence 34556799999999999987644421 0 111112 2355555543 56666677788899999987766 Q ss_pred EEeccCCCC Q lcl|NC_019722. 74 VVASSKGLY 82 (82) Q Consensus 74 ~~~s~KGLy 82 (82) +--+.++-| T Consensus 299 lg~~~~~~~ 307 (422) T protein:vir:13 299 LNDLERATF 307 (422) T ss_pred hCCCCCCCc Confidence 655555556 No 44 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=20.02 E-value=2.8 Score=18.09 Aligned_cols=81 Identities=9% Similarity=0.176 Sum_probs=51.5 Q ss_pred CCccccCHHHHHHHHHHHHhhhcCceeeee-eecccCcccccccccccCcH----HHHHHHHHHHHhhhhhccceeeeEE Q lcl|NC_019722. 1 MSESLWTPEDLAEVKRAIKELAIGKRLVRV-SFSGINGSNQTNEYAPVDLP----QLRKLRREMEAEIAAAQGVESVSVV 75 (82) Q Consensus 1 msesl~T~E~LAeVk~AI~eL~~G~R~~Rv-s~~Gingsn~T~eY~~VDLP----qLR~L~R~~~a~i~~~~~~~~~~~~ 75 (82) +..+-.++||...+|+++++-. |.-=-|. -.++.+|.....+|-|+... |+...+.--..+|+++-|+-..-+- T Consensus 211 ~~d~~ls~e~~~~lk~~~~~~~-g~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llG 289 (344) T protein:vir:56 211 VTDAVQDRNDIEMLRENMVKSK-GRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMG 289 (344) T ss_pred ecCCCCCHHHHHHHHHHHHHhc-CCCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhc Confidence 5555689999999999998843 2211111 12333455566778777653 4567777788899999998776553 Q ss_pred ec--cCCCC Q lcl|NC_019722. 76 AS--SKGLY 82 (82) Q Consensus 76 ~s--~KGLy 82 (82) .. +-|-| T Consensus 290 i~~~~t~~~ 298 (344) T protein:vir:56 290 GKPENVGSL 298 (344) T ss_pred cCCCCCCcc Confidence 32 22334 Done!