Query lcl|NC_019450.1_cdsid_YP_007002472.1 [gene=PJG4_068] [protein=hypothetical protein] [protein_id=YP_007002472.1] [location=32579..33142] Match_columns 187 No_of_seqs 2 out of 5 Neff 1.7 Searched_HMMs 1612 Date Thu Nov 7 17:24:16 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_56 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_56_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:94061 Length: 175 97.0 1.4E-05 8.9E-09 47.1 9.4 160 1-173 8-175 (175) 2 protein:vir:3637 Length: 178 # 97.0 2.8E-05 1.7E-08 45.6 10.3 165 1-175 1-178 (178) 3 protein:vir:78612 Length: 178 96.9 2.4E-05 1.5E-08 45.9 9.4 157 1-169 9-178 (178) 4 protein:vir:101569 Length: 178 96.8 3.1E-05 1.9E-08 45.3 9.7 159 1-169 1-178 (178) 5 protein:vir:106763 Length: 178 96.6 5.6E-05 3.5E-08 43.9 9.3 159 1-169 9-178 (178) 6 protein:vir:96106 Length: 183 68.0 0.24 0.00015 23.9 9.5 167 1-170 1-183 (183) 7 protein:vir:99607 Length: 186 42.9 0.87 0.00054 20.9 8.4 172 1-174 1-186 (186) 8 protein:vir:744 Length: 129 # 37.1 1.1 0.0007 20.3 7.5 125 1-148 1-129 (129) 9 protein:vir:3618 Length: 129 # 35.0 1.3 0.00078 20.0 7.5 124 1-148 1-129 (129) 10 protein:vir:3972 Length: 129 # 33.1 1.4 0.00086 19.8 7.5 125 1-148 1-129 (129) No 1 >protein:vir:94061 Length: 175 # NCBI annotation: hypothetical protein # Family: family:all:3176 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453620;genbank:gi:84662656;genbank:GeneID:5142571 Probab=97.03 E-value=1.4e-05 Score=47.15 Aligned_cols=160 Identities=9% Similarity=0.127 Sum_probs=119.9 Q ss_pred CcchhhhHHHHHHHHHHcC----CcceehhhhcCC-CCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhh--hh Q lcl|NC_019450. 1 MIHTELENSLYLMVKELFP----DWRVIQAYTNNQ-EPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQ--DF 73 (187) Q Consensus 1 ~I~T~LE~sLY~~~~~~~~----D~~~i~sY~~NQ-~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~--~~ 73 (187) .-.++|=++|--...++|| |-.|+++|-||- .|+-+...+-|-.--.|.+--+.- ||.+ +++.+++ .+ T Consensus 8 ~Te~di~~alr~fL~~lf~lp~~~~eVi~g~qN~~p~P~g~fi~mt~l~~~~lsT~~~~Y--~~~~---g~~~~~~~~q~ 82 (175) T protein:vir:94 8 PTEDAVFDAMFGFLAKVLDLPDDTQAIIKGFQNLSSTPTGSCVVVSPGMMTRQDFGSRLY--DPGL---SKVVIEAHLTY 82 (175) T ss_pred ccHHHHHHHHHHHHHHHcCCCCCCceEEEeccCCCCccCCCEEEEecccccccccceeee--cccc---cceeeeeeeEE Confidence 2344566666677788888 778999999875 455666777765555555443322 6655 4444444 33 Q ss_pred hheeeeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCcccee-eeEEEEEEeeeeeeeh Q lcl|NC_019450. 74 AAKVVFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMY-MFYQVTCEFGFSVIET 152 (187) Q Consensus 74 ~~K~~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY-~~~~~~~~~~~si~~~ 152 (187) ...+-|- |.. +.++|+.|.-..|++=|-+++.+ .++...+.+.|-.|+--....| ..|.++.|+.|..+-+ T Consensus 83 ~~QvD~Y-----G~~--A~d~A~~~~tl~Rs~~a~~~~~~-~~~PLYad~p~qlp~iN~e~QyE~Rwt~~~~lQ~Np~vt 154 (175) T protein:vir:94 83 SYQVDCY-----GPL--APTWASVISVAWKSMWGVDNTAP-AFAPLYADAPQQLNIVNSEGQFEQRFMVRLFGQVNQRVA 154 (175) T ss_pred EEEEEee-----cCC--hHHHHHHHHHHhcChhHhhhhhc-ccccccCcCccccCccCccccccceEEEEEEEEeeeEEe Confidence 4555553 443 46899999999999999887754 4999999999999998877766 5899999999999999 Q ss_pred hhhhHhhhhccceeeecCCCC Q lcl|NC_019450. 153 TTQEFAAGADIHGVYYDAGRP 173 (187) Q Consensus 153 ~~~~~~~~~~i~~VY~~AGRP 173 (187) ..|.|+.+++++-+=.|+--| T Consensus 155 ~pq~F~d~v~v~~~~~d~~~P 175 (175) T protein:vir:94 155 LPQDFFDSVQLTSLNIADLLP 175 (175) T ss_pred eehhhcccCCcceeeceecCC Confidence 999999999999888888779 No 2 >protein:vir:3637 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705632;genbank:gi:23752317;genbank:gi:47835036;genbank:GeneID:955731 Probab=96.96 E-value=2.8e-05 Score=45.57 Aligned_cols=165 Identities=20% Similarity=0.134 Sum_probs=116.5 Q ss_pred Cc--------chhhhHHHHHHHHHHc---CCcceehhhhcCC-CCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhh Q lcl|NC_019450. 1 MI--------HTELENSLYLMVKELF---PDWRVIQAYTNNQ-EPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQ 68 (187) Q Consensus 1 ~I--------~T~LE~sLY~~~~~~~---~D~~~i~sY~~NQ-~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~ 68 (187) |+ .++|=++|--...++| +|-.|+++|-||- .|.-++..+-|..--.+.+--+.- ||.+--....+ T Consensus 1 m~~~vtl~~Te~di~~alr~fL~~lf~p~~~~eVi~gqqN~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~~~~~ 78 (178) T protein:vir:36 1 MTNPVTLRPSEDEVFDTLWEWVTSLFDPASAAQIAKADQNATSTLYGTYALIRPGVREALNQTIRSY--DATAQTVANEL 78 (178) T ss_pred CCCcccccccHHHHHHHHHHHHHHHcCCCCCceEEeecccCCCcCCCCEEEEecccccccccceeec--CCcchheeeee Confidence 32 3334444444555558 5778999999875 456667888887777776655533 55433333333 Q ss_pred hhhhhhheeeeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCcccee-eeEEEEEEeee Q lcl|NC_019450. 69 VQQDFAAKVVFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMY-MFYQVTCEFGF 147 (187) Q Consensus 69 V~~~~~~K~~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY-~~~~~~~~~~~ 147 (187) .++| ...+-| ||.. +.++|+.|.-..|++-|...+++++++..-+.+.|-.|+--....| ..|.++.|+.| T Consensus 79 ~~~~-~~QvD~-----YG~~--A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~p~qlp~iN~e~QyE~Rwt~~~~lQ~ 150 (178) T protein:vir:36 79 HTGY-WYQVDC-----YGPQ--APDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHAQV 150 (178) T ss_pred eeEE-EEEEEe-----ecCC--hhHHHHHHHHHhcChhHHHHHhcCccccccCCCccccCccCccccccceEEEEEEEEe Confidence 3322 223333 4444 4689999999999999999999999999999999999998877666 68999999999 Q ss_pred eeeehhhhhHhhhhccceeeecCCCCcc Q lcl|NC_019450. 148 SVIETTTQEFAAGADIHGVYYDAGRPGH 175 (187) Q Consensus 148 si~~~~~~~~~~~~~i~~VY~~AGRP~H 175 (187) ..+-+..|.|+..+.+--.----=||-. T Consensus 151 Np~vt~pqdFfd~~~~~~~~~vd~~~~~ 178 (178) T protein:vir:36 151 NQVETAPQLFFTEAPATTATPVDIVPLD 178 (178) T ss_pred eeEEeehhhhcccCccceeeecccccCC Confidence 9999999999988876544333334433 No 3 >protein:vir:78612 Length: 178 # NCBI annotation: BcepNY3gp04 # Family: family:all:3176 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294841;genbank:gi:149882904;genbank:GeneID:5291083 Probab=96.88 E-value=2.4e-05 Score=45.93 Aligned_cols=157 Identities=19% Similarity=0.177 Sum_probs=116.7 Q ss_pred CcchhhhHHHHHHHHHHcCC---cceehhhhcCC-CCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhh--hhh Q lcl|NC_019450. 1 MIHTELENSLYLMVKELFPD---WRVIQAYTNNQ-EPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQ--DFA 74 (187) Q Consensus 1 ~I~T~LE~sLY~~~~~~~~D---~~~i~sY~~NQ-~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~--~~~ 74 (187) .-.++|=++|--....+||+ -.|+++|-||- .|+-++..+-|..--.+.+--+.- ||.+ ++..+++ -+. T Consensus 9 ~Te~di~~alr~fL~~lf~~~~~~eVi~gqqN~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~---~~~~~~~~~~~~ 83 (178) T protein:vir:78 9 PSEDEVFDTLWGWVTSLFDPALASQIAKADQNATSTLYGTYALIRPGVREALNQTIRTY--DATA---GTVSNELHTGYW 83 (178) T ss_pred ccHHHHHHHHHHHHHHhcCcccCceEEEeccCCCCccCCCEEEEecccccccccceeec--cCcc---ceeeeeeeeEEE Confidence 23455666677777889984 47999999875 456677888887777776655433 6654 4444444 233 Q ss_pred heeeeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCcccee-eeEEEEEEeeeeeeehh Q lcl|NC_019450. 75 AKVVFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMY-MFYQVTCEFGFSVIETT 153 (187) Q Consensus 75 ~K~~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY-~~~~~~~~~~~si~~~~ 153 (187) ..+-|- |.. +.++|+.|.-..|++-|...+++++++..-+.+.|-.|+--....| ..|.++.|+.|..+-+. T Consensus 84 ~QvD~Y-----G~~--A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~P~q~p~iN~e~QyE~Rwt~~~~lQ~Np~vt~ 156 (178) T protein:vir:78 84 YQVDCY-----GPQ--APDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGENQFEQRYMVKLHAQVNQVATA 156 (178) T ss_pred EEEEEe-----cCC--hhHHHHHHHHHhcChhHHHHHhcCcccceecCCcccCCccCccccccceEEEEEEEEeeeEEee Confidence 444443 433 4689999999999999999999999998888888999998766555 68999999999999999 Q ss_pred hhhHhhhhccce------eeec Q lcl|NC_019450. 154 TQEFAAGADIHG------VYYD 169 (187) Q Consensus 154 ~~~~~~~~~i~~------VY~~ 169 (187) .|.|+.+++|.- |=.| T Consensus 157 pqdFfd~v~v~~~~~~di~~~~ 178 (178) T protein:vir:78 157 PQQFFTEVPATTATPVDIVPLD 178 (178) T ss_pred hhhhccccccceecccceeccC Confidence 999999998743 2222 No 4 >protein:vir:101569 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958109;genbank:gi:41057655;genbank:GeneID:2716826 Probab=96.84 E-value=3.1e-05 Score=45.34 Aligned_cols=159 Identities=21% Similarity=0.165 Sum_probs=113.9 Q ss_pred Cc--------chhhhHHHHHHHHHHc---CCcceehhhhcCC-CCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhh Q lcl|NC_019450. 1 MI--------HTELENSLYLMVKELF---PDWRVIQAYTNNQ-EPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQ 68 (187) Q Consensus 1 ~I--------~T~LE~sLY~~~~~~~---~D~~~i~sY~~NQ-~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~ 68 (187) |+ .++|=++|--...++| +|-.|+++|-||- .|.-++..+-|..--.+.+--+.- ||.+--....+ T Consensus 1 m~~~vtl~~Te~di~~alr~fL~~lf~p~~~~eVi~gqqN~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~~~~~ 78 (178) T protein:vir:10 1 MTNPVTLRPSEDEVFDTLWEWVTSLFDPASAAQIAKADQNATSTLYGTYALIRPGVREALNQTIRSY--DATAQTVANEL 78 (178) T ss_pred CCCcccccccHHHHHHHHHHHHHHHcCCCCCceEEeecccCCCcCCCCEEEEecccccccccceeec--CCcchheeeee Confidence 32 3334444444555558 5778999999875 456667888887777776655533 55433333333 Q ss_pred hhhhhhheeeeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCcccee-eeEEEEEEeee Q lcl|NC_019450. 69 VQQDFAAKVVFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMY-MFYQVTCEFGF 147 (187) Q Consensus 69 V~~~~~~K~~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY-~~~~~~~~~~~ 147 (187) .++| ...+-| ||.. +.++|+.|.-..|++-|...+++++++..-+.+.|-.|+--....| ..|.++.|+.| T Consensus 79 ~~~~-~~QvD~-----YG~~--A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~p~qlp~iN~e~QyE~Rwt~~~~lQ~ 150 (178) T protein:vir:10 79 HTGY-WYQVDC-----YGPQ--APDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHAQV 150 (178) T ss_pred eeEE-EEEEEe-----ecCC--hhHHHHHHHHHhcChhHHHHHhcCccccccCCCccccCccCccccccceEEEEEEEEe Confidence 3322 223333 4444 4689999999999999999999999999999999999998877666 68999999999 Q ss_pred eeeehhhhhHhhhhccce------eeec Q lcl|NC_019450. 148 SVIETTTQEFAAGADIHG------VYYD 169 (187) Q Consensus 148 si~~~~~~~~~~~~~i~~------VY~~ 169 (187) ..+-+..|.|+.+++|.- |=.| T Consensus 151 Np~vt~pqdFfd~~~i~~~~~~di~~~~ 178 (178) T protein:vir:10 151 NQVATAPQLFFTEAPATTATPVDIVPLD 178 (178) T ss_pred eeEEeehhhhccccccccccccceeccC Confidence 999999999999998743 2222 No 5 >protein:vir:106763 Length: 178 # NCBI annotation: gp05 # Family: family:all:3176 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944313;genbank:gi:38638612;genbank:GeneID:2657394 Probab=96.56 E-value=5.6e-05 Score=43.89 Aligned_cols=159 Identities=19% Similarity=0.159 Sum_probs=116.4 Q ss_pred CcchhhhHHHHHHHHHHcCC---cceehhhhcCC-CCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhhhhhhe Q lcl|NC_019450. 1 MIHTELENSLYLMVKELFPD---WRVIQAYTNNQ-EPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQDFAAK 76 (187) Q Consensus 1 ~I~T~LE~sLY~~~~~~~~D---~~~i~sY~~NQ-~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~~~~~K 76 (187) .-.++|=++|--....+||+ -.|+++|-||- .|.-++..+-|..--.+.+--+.- ||.+--....+.++ +... T Consensus 9 ~Te~di~~alr~fL~~lf~~~~~~eVi~gqqN~~p~P~g~fiimt~l~~~~lsT~~~~Y--~~~~~~~~~~~~~~-~~~Q 85 (178) T protein:vir:10 9 PSEDEVFDTLWGWVTSLFDPALASQIAKADQNATSTLYGTYALIRPGVREALNQTIRTY--DATAGTVSNELHTG-YWYQ 85 (178) T ss_pred ccHHHHHHHHHHHHHHhcCcccCceEEEeccCCCCccCCCEEEEecccccccccceeec--cCCcceeeeeeeeE-EEEE Confidence 23455666677777888984 47999999875 456677888887777776655433 66543333333332 2333 Q ss_pred eeeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCcccee-eeEEEEEEeeeeeeehhhh Q lcl|NC_019450. 77 VVFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMY-MFYQVTCEFGFSVIETTTQ 155 (187) Q Consensus 77 ~~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY-~~~~~~~~~~~si~~~~~~ 155 (187) +-| ||.. +.++|+.|.-..|++-|...+++++++..-+.+.|-.|+--....| ..|.++.|+.|..+-+..| T Consensus 86 vD~-----YG~~--A~d~A~~i~tl~Rs~~a~~~f~~~~iaPLYad~P~q~p~iN~e~QyE~Rwt~~~~lQ~Np~vt~pq 158 (178) T protein:vir:10 86 VDC-----YGPQ--APDWANTIAAMWRTMWSADALRGTALIPLYADQPQQLNIVNGEGQYEQRYMVKLHAQVNQVATAPQ 158 (178) T ss_pred EEe-----ecCC--hhHHHHHHHHHhcChhHHHHHhcCcccceecCCcccCCccCccccccceEEEEEEEEeeeEEeehh Confidence 444 3444 4689999999999999999999999998888888999998776666 6899999999999999999 Q ss_pred hHhhhhccce------eeec Q lcl|NC_019450. 156 EFAAGADIHG------VYYD 169 (187) Q Consensus 156 ~~~~~~~i~~------VY~~ 169 (187) .|+.+++|.- |=.| T Consensus 159 dFfd~v~i~~~~~vd~~~~~ 178 (178) T protein:vir:10 159 QFFTEVPATTATPVDIVPLD 178 (178) T ss_pred hhccccccccccccceeccC Confidence 9999998743 3333 No 6 >protein:vir:96106 Length: 183 # NCBI annotation: hypothetical protein ORF027 # Family: family:all:7160 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294444;genbank:gi:149408341;genbank:GeneID:5237225 Probab=68.01 E-value=0.24 Score=23.95 Aligned_cols=167 Identities=13% Similarity=0.161 Sum_probs=91.9 Q ss_pred CcchhhhHHHHH-----H----HHHHcCCcceehhhhcCCC--CcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhh Q lcl|NC_019450. 1 MIHTELENSLYL-----M----VKELFPDWRVIQAYTNNQE--PQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQV 69 (187) Q Consensus 1 ~I~T~LE~sLY~-----~----~~~~~~D~~~i~sY~~NQ~--~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V 69 (187) |---+|+.+|+. | -++-+||++|+++|---|| +.-|++++.|-.=-+-|----+.-+|+-+-.-.-+ = T Consensus 1 M~D~eLi~~v~~~i~~~~l~~l~~~~~~d~~V~q~fQPtqQG~~~~~~i~f~~i~~~~~Gw~~r~~~yd~~~~~~~~i-e 79 (183) T protein:vir:96 1 MFDGELIEKLVVELTSAMTSAKETLQFPDFEVVQKAQPTQQGTSTKPAIFFQKLFDIPRGWPATDWYLDNAARKYVEI-T 79 (183) T ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCCeeEEecccccccccccCCeEEEEecCCCCCCCcccccccccccchhhhh-h Confidence 777777776665 2 2334689999999977666 34588998552111111111122234433111110 1 Q ss_pred hhhhhheeeeeecc----CCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCccceeee-EEEEEE Q lcl|NC_019450. 70 QQDFAAKVVFELIG----KYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMYMF-YQVTCE 144 (187) Q Consensus 70 ~~~~~~K~~F~~iG----~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY~~-~~~~~~ 144 (187) +|-+..---|..+= +--+---|+|.+.-..+.+..-+=-+++++-|+-...+..+|+..-.-.++=|.| =.+|+. T Consensus 80 tQl~e~TyQiqalv~~d~~~~~~~TA~Dv~~~vR~i~qS~~f~~~l~~q~vgI~RaseIr~~~f~nD~~~~E~~PsFd~~ 159 (183) T protein:vir:96 80 RQHVETTFQISSLHWQNPELDHVVTAADIANYVRAYFQARSTIQRVKELDFLILRVSHISNEAFENDNHQFEFHPSFDMV 159 (183) T ss_pred heeeeeeEEEEEeeccCccchhhhhHHHHHHHHHHHHhhHHHHHHHHhcCcceeccccccccccccCCCCCCcCceeEEE Confidence 12222222233222 2222234667776666667777778999999999999999999887666665543 234555 Q ss_pred eeeeeeehhhhhHhhhhccceeeecC Q lcl|NC_019450. 145 FGFSVIETTTQEFAAGADIHGVYYDA 170 (187) Q Consensus 145 ~~~si~~~~~~~~~~~~~i~~VY~~A 170 (187) ++|...-+.++.-+. -.|||...- T Consensus 160 vTh~~~it~~t~av~--~~~~~~~~~ 183 (183) T protein:vir:96 160 VTYNQYIRLHENAAY--SADGVLIGI 183 (183) T ss_pred EEeeeeEeecchhhh--hcceeeeeC Confidence 555554444433332 334554432 No 7 >protein:vir:99607 Length: 186 # NCBI annotation: hypothetical protein # Family: family:all:7160 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039797;genbank:gi:126011047;genbank:GeneID:4818302 Probab=42.90 E-value=0.87 Score=20.93 Aligned_cols=172 Identities=15% Similarity=0.097 Sum_probs=104.6 Q ss_pred CcchhhhHHHHHHH----HHHcCCcceehhhhcCCC--CcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhh-hhhh Q lcl|NC_019450. 1 MIHTELENSLYLMV----KELFPDWRVIQAYTNNQE--PQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQV-QQDF 73 (187) Q Consensus 1 ~I~T~LE~sLY~~~----~~~~~D~~~i~sY~~NQ~--~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V-~~~~ 73 (187) |---||+.++-.+. ++...+++|+++|---|| +.-|+++|.+-.=++.|----+.-.|+-+ +...++ +|-+ T Consensus 1 M~dneL~~~ir~~L~a~L~sqg~~~~Vv~~fQPtqQG~~~~~~~Ff~~~~~~~~G~~~q~r~y~~~~--~~~~~ietQl~ 78 (186) T protein:vir:99 1 MTDLELIDTVVPYIEAAIASQGWPFLVVQKDQPTQQGVPSIGTVFFELLFNIEYGSPATENQYNAAS--NQFDEIETQLV 78 (186) T ss_pred CCchhHHHHHHHHHHHHHHhcCCCceeeccccCcccCccCCCeEEEEeccCCcccCChhhccccccc--ccceeehheee Confidence 76667766654443 556789999999977666 34688888874334433222244444432 222222 2222 Q ss_pred hheeeeeecc----CCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCcccccccCCccceeee-EEEEEEeeee Q lcl|NC_019450. 74 AAKVVFELIG----KYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPSTRRVPMLRETDMYMF-YQVTCEFGFS 148 (187) Q Consensus 74 ~~K~~F~~iG----~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~~RRi~~~R~~~mY~~-~~~~~~~~~s 148 (187) ..---|..+= +--+---|+|.+.-..+.|..-+=-+++++-|+-...+..||+..-.-.++=|.| =.+|+.++|. T Consensus 79 e~TyQiqalv~~d~~~~~~~TA~Dv~~~vR~i~qS~~fi~~l~~q~vgI~RaseIr~~~f~nD~~~~E~~PsFdi~vTh~ 158 (186) T protein:vir:99 79 ITTIQISALIPQDPKNIDQPTANDVLQYVKRYVASRNIARELVKKKVNIYRVSEVRAQWFEDDNHQFSNHPNFDLEVTHS 158 (186) T ss_pred eeeEEEEEeeccCccchhhhhHHHHHHHHHHHHhhHHHHHHHHhcCcceeccccccccccccCCCCCccCceeEEEEEee Confidence 2233333331 1122234667777667777777778999999999999999999887766665543 2467777777 Q ss_pred eeehhhhhHhhhhcccee-eecCCC-Cc Q lcl|NC_019450. 149 VIETTTQEFAAGADIHGV-YYDAGR-PG 174 (187) Q Consensus 149 i~~~~~~~~~~~~~i~~V-Y~~AGR-P~ 174 (187) ..-+.++.-+..++---| -|..|. |- T Consensus 159 ~~it~~t~av~~~~p~~~~~~~~~~~~~ 186 (186) T protein:vir:99 159 GKVTFSVAAVDRCDPLEVPPYGSGTFPV 186 (186) T ss_pred eeEeechhhhhhcccccCCCCCCCcCCC Confidence 766666666666553332 355665 65 No 8 >protein:vir:744 Length: 129 # NCBI annotation: major structural protein 2 # Family: family:all:504 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108721;genbank:gi:13487843;genbank:GeneID:920879 Probab=37.11 E-value=1.1 Score=20.28 Aligned_cols=125 Identities=16% Similarity=0.222 Sum_probs=73.1 Q ss_pred Ccch---hhhHHHHHHHHHHcCCcceehhhhcCCCCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhhhhhhee Q lcl|NC_019450. 1 MIHT---ELENSLYLMVKELFPDWRVIQAYTNNQEPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQDFAAKV 77 (187) Q Consensus 1 ~I~T---~LE~sLY~~~~~~~~D~~~i~sY~~NQ~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~~~~~K~ 77 (187) |+.| ||=|+||.-.+++ +++| -.|--..+.-=|+++|. +.... .+++-.+.+- ..-+ T Consensus 1 mmksp~qeL~d~~~~~l~~l--G~~v-yD~lP~~~v~YPfV~ig--~~~~~--------~~~tKt~~~g-------~v~l 60 (129) T protein:vir:74 1 MIKTRDQSIFDELFKRIQAL--GYTV-YDYKPMNEVGYPFVELE--NTQTI--------HEANKTDIKG-------TVSL 60 (129) T ss_pred CCcChhHHHHHHHHHHHHhc--CCee-eeccCCCCCCcCEEEee--eeeec--------CCcccccccc-------EEEE Confidence 7765 6777777778775 5664 33443333333555554 32221 1222222111 1223 Q ss_pred eeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCccccc-CCcccccccCCccceeeeEEEEEEeeee Q lcl|NC_019450. 78 VFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFK-LPSTRRVPMLRETDMYMFYQVTCEFGFS 148 (187) Q Consensus 78 ~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~-~~~~RRi~~~R~~~mY~~~~~~~~~~~s 148 (187) ..-.-|.+-.-..+++|+..|..++.. ....+.+.|+++- --+++=++|--+|....|-.++.+|-|. T Consensus 61 tihVW~~~~~R~~v~~i~~~i~~~~~~---~~~t~~y~~~~~~~~~~~q~~~Dtst~~~L~Hgvi~l~f~~r 129 (129) T protein:vir:74 61 SLSVWGLQKKRKEVSDMASNIFNQALN---ISATDGYSWALNSQASTIQMLDDTTTHTPLKRALINLEFRLR 129 (129) T ss_pred EEEEeeCCccchhHHHHHHHHHHHhcc---ccccCCcEEEEeecceeEEEcccCCCCceeeeEEEEEEEEeC Confidence 455567888888999999999888763 2222223333321 2334556666689999999999999988 No 9 >protein:vir:3618 Length: 129 # NCBI annotation: ORF41 # Family: family:all:504 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112704;genbank:gi:13786572;genbank:GeneID:921070 Probab=34.95 E-value=1.3 Score=20.03 Aligned_cols=124 Identities=16% Similarity=0.222 Sum_probs=74.7 Q ss_pred Ccch---hhhHHHHHHHHHHcCCcceehhhhcCCCCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhhhhhhee Q lcl|NC_019450. 1 MIHT---ELENSLYLMVKELFPDWRVIQAYTNNQEPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQDFAAKV 77 (187) Q Consensus 1 ~I~T---~LE~sLY~~~~~~~~D~~~i~sY~~NQ~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~~~~~K~ 77 (187) |+.| ||=|+||.-.+++ +++| -.|--..+.-=|+++|.. .... ..++-.+.+- ..-+ T Consensus 1 mmksp~qeL~d~~f~~l~~l--G~~v-yD~lP~~~v~YPfV~ig~--~~~~--------~~~tKt~~~g-------~v~l 60 (129) T protein:vir:36 1 MIKTRDQSIFDELFKRIQAL--GYTV-YDYKPMNEVGYPFVELEN--TQTI--------HEANKTDIKG-------TVSL 60 (129) T ss_pred CCcChhHHHHHHHHHHHHhc--CCee-eeccCCCCCCcCEEEeee--eeec--------CCcccccccc-------EEEE Confidence 7765 6777778778775 5664 334443333335555543 2221 1222211111 1234 Q ss_pred eeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccccCCc--ccccccCCccceeeeEEEEEEeeee Q lcl|NC_019450. 78 VFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLFKLPS--TRRVPMLRETDMYMFYQVTCEFGFS 148 (187) Q Consensus 78 ~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~~~~~--~RRi~~~R~~~mY~~~~~~~~~~~s 148 (187) ....-|.+-.-..+++|+..|..++... ...+.+.|++ ..++ ++=+.|.-++....|-.++.+|-|. T Consensus 61 tihVW~~~~~R~~v~~i~~~i~~~~~~~---~~t~~y~~~~-~~~~~~~q~~~D~st~~~L~Hgii~l~f~~r 129 (129) T protein:vir:36 61 SLSVWGLQKKRKEVSDMASNIFNQALNI---SATDGYSWAL-NSQASTIQMLDDTTTNTPLKRALINLEFRLR 129 (129) T ss_pred EEEEEeCCcCchhHHHHHHHHHHHhccc---ccCCCeEEEE-EeeeeeEEEeccCCCCceeeEEEEEEEEEeC Confidence 4556677888889999999998887632 3333333333 2233 5668888899999999999999988 No 10 >protein:vir:3972 Length: 129 # NCBI annotation: structural protein # Family: family:all:504 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663680;genbank:gi:21716117;genbank:GeneID:951217 Probab=33.08 E-value=1.4 Score=19.82 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=73.6 Q ss_pred Ccch---hhhHHHHHHHHHHcCCcceehhhhcCCCCcCceeEeehhhHhhhhhhhhccccCCCCcchhhhhhhhhhhhee Q lcl|NC_019450. 1 MIHT---ELENSLYLMVKELFPDWRVIQAYTNNQEPQTPYLAIDIKRLDELGRENVSNMSDPISPSHGTIQVQQDFAAKV 77 (187) Q Consensus 1 ~I~T---~LE~sLY~~~~~~~~D~~~i~sY~~NQ~~QTP~L~I~~~~i~~~~~E~Vs~~~DP~~P~~~~~~V~~~~~~K~ 77 (187) |+.| ||=|+||.-.+++ +++|. .|--..+.-=|+++|.. .... .+|+-.+.+- ..-+ T Consensus 1 mmksp~qeL~d~~f~~l~~l--G~~vy-D~lP~~~v~YPfV~ig~--~~~~--------~~~tKt~~~g-------~v~l 60 (129) T protein:vir:39 1 MIKTRDQSIFDELFKRIQAL--GYTVY-DYKQMNEVGYPFVEMEN--TQTI--------HEPNKTDIKG-------TVSL 60 (129) T ss_pred CCcChhHHHHHHHHHHHHhc--CCeee-eccCCCCCCcCEEEeee--eeec--------CCcccccccc-------EEEE Confidence 7765 6777777778775 56643 34332222235555543 2221 1222221111 1234 Q ss_pred eeeeccCCCchhhHHHHHHHHHHHhcChhhhHHHHhcCcccc-cCCcccccccCCccceeeeEEEEEEeeee Q lcl|NC_019450. 78 VFELIGKYGETASVSDMAMAITRAMRTPAGHAAQRKFNLSLF-KLPSTRRVPMLRETDMYMFYQVTCEFGFS 148 (187) Q Consensus 78 ~F~~iG~~~~~A~~s~~~~~i~~~m~T~~G~~A~~~~~~S~~-~~~~~RRi~~~R~~~mY~~~~~~~~~~~s 148 (187) ....-|.+-.-..+++|+..|..++.+. ...+-+.|+++ .--+++=++|--++....|-.++.+|-|. T Consensus 61 tihVW~~~~~R~~v~~i~~~i~~~~~~~---~~t~~y~~~~~~~~~~~q~~~Dts~~~~L~Hgvi~l~f~~r 129 (129) T protein:vir:39 61 SLSVWGLQKKRKEVSDMASNIFNQALNI---SATDGYSWALNLQASTIQMMDDTTTGTPLKRAFINLEFRLR 129 (129) T ss_pred EEEEEeCCcCchhHHHHHHHHHHHhccc---ccCCCeeEEEeecceeEEEecccCCCceeeeEEEEEEEEeC Confidence 5556677888889999999998877642 22322333332 22345667776689999999999999988 Done!