Query lcl|NC_019408.1_cdsid_YP_006989117.1 [gene=D869_gp263] [protein=hypothetical protein] [protein_id=YP_006989117.1] [location=55662..56054] Match_columns 130 No_of_seqs 5 out of 8 Neff 2.3 Searched_HMMs 1612 Date Thu Nov 7 17:13:01 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_88 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_88_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:97237 Length: 122 99.1 1E-12 6.5E-16 86.3 9.8 116 1-124 1-122 (122) 2 protein:vir:80382 Length: 122 98.5 2.1E-09 1.3E-12 68.1 9.7 115 1-124 1-122 (122) 3 protein:vir:104346 Length: 123 97.4 4.6E-06 2.9E-09 49.8 10.3 119 1-129 1-123 (123) 4 protein:vir:79639 Length: 123 96.7 1.4E-05 8.9E-09 47.1 7.0 118 1-129 1-123 (123) 5 protein:vir:107669 Length: 123 95.2 0.00023 1.4E-07 40.5 7.0 118 1-129 1-123 (123) 6 protein:vir:95145 Length: 126 93.6 0.0028 1.7E-06 34.6 9.4 113 1-124 1-126 (126) 7 protein:vir:78381 Length: 119 24.6 1.3 0.0008 20.0 3.9 114 1-124 1-119 (119) 8 protein:vir:94992 Length: 78 # 23.2 2 0.0012 19.0 4.6 75 35-124 1-78 (78) 9 protein:vir:5977 Length: 109 # 4.9 14 0.0085 14.3 8.1 107 17-130 1-108 (109) 10 protein:vir:95069 Length: 111 2.6 25 0.016 12.9 2.2 105 14-130 1-107 (111) No 1 >protein:vir:97237 Length: 122 # NCBI annotation: hypothetical protein ORF025 # Family: family:all:704 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294533;genbank:gi:149408254;genbank:GeneID:5237102 Probab=99.08 E-value=1e-12 Score=86.27 Aligned_cols=116 Identities=15% Similarity=0.130 Sum_probs=84.4 Q ss_pred CchHHHHHHHHHHHHhhccchhhhheeeeccCCCCCCCCCCe--eeecceeeecCceEEeeecchhhccCCCeeecC-EE Q lcl|NC_019408. 1 MALEAFIQSQVLVAFNQLDDLCKRWTYVQRSGTGVRDVESGK--TVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGE-KL 77 (130) Q Consensus 1 MgLk~~i~s~~~~aFdaLddl~~kvty~~~Sg~~V~d~~s~t--tT~pst~~~~p~aVf~~F~s~erd~~g~ilvgd-k~ 77 (130) |++-.-+++ .|.+-|...-..||+.+..+....|.+++- .+.+..+|+ .++||.+|+.++.|.. .|+.|| ++ T Consensus 1 M~~y~~~~~---~a~~Li~kfG~~vtl~r~~~g~y~~~~g~~~p~~~t~~~~~-~~gv~~~~~~~~idGt-lI~~GD~~l 75 (122) T protein:vir:97 1 MARFDSAIA---LAKKLIKKNGQAVTLRGFTAGAAPDPAKPWKPGGNVAADQT-IEAVFLDYEQRYIDGQ-TIRMGDQRV 75 (122) T ss_pred CccchHHHH---HHHHHHHHhCCceEEEEeccceeCCCCCceecCCceeeeee-eEEEeeccchhhccCc-EEeecCEEE Confidence 998776766 455555567778887655533333222221 122234554 6999999999988877 999999 77 Q ss_pred EEeeeecCCCccccccceeecCCCeEEEEecCCC---CceeEEEEEEeec Q lcl|NC_019408. 78 LFPRVYLPKGFETKTSDYLIDEADVIWEIMSDLS---DPAKAVAILQVRT 124 (130) Q Consensus 78 LfP~v~Lp~gfe~~t~D~lId~~gv~weiis~~~---DPa~a~~~iQvR~ 124 (130) ++.+-.|+ ++++..| +|--+|+.|+||+-.. ++..++|.||+|+ T Consensus 76 ~~~a~~~~--~~P~~gD-~v~~~g~~~~Vi~v~~i~pa~~~v~y~lqlRk 122 (122) T protein:vir:97 76 FMPAEGLT--APPEVEG-LVLRGLEVWKVIAVKPLNPNGQAIMYELQVRQ 122 (122) T ss_pred EEeeCCCc--cccccCC-EEEeCCEEEEEEeccccCCCCceEEEEEEeeC Confidence 77777775 9999999 6677889999999976 5567899999999 No 2 >protein:vir:80382 Length: 122 # NCBI annotation: BcepGomrgp10 # Family: family:all:704 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210230;genbank:gi:146329922;genbank:GeneID:5123491 Probab=98.49 E-value=2.1e-09 Score=68.12 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=76.1 Q ss_pred CchHH--HHHHHHHHHHhhccchhhhheeee-ccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecC-E Q lcl|NC_019408. 1 MALEA--FIQSQVLVAFNQLDDLCKRWTYVQ-RSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGE-K 76 (130) Q Consensus 1 MgLk~--~i~s~~~~aFdaLddl~~kvty~~-~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgd-k 76 (130) |.==+ -+++--.+.+...+-=|--..+.. ..+...|++..++.. ++-. .+||..|+.++.|.+ .|++|| + T Consensus 1 m~~f~Y~rl~~~A~~Li~kfG~~~tv~~~~~~~~~~~~~~P~t~~~~--~~~v---~gv~~~y~~r~idGt-lIq~GD~~ 74 (122) T protein:vir:80 1 MKSFNYPRLLKTVDRLIEKFGEECFIVEYIDAVDPTRPFDPPVRTEV--RTPV---KGVFVKATEKHADGT-LIHIGDQL 74 (122) T ss_pred CCCcchhHHHHHHHHHHHHhCCCeEEEEeeccCCCCCccccCCCcee--eccc---eEEEecccccccCCc-EEeeCCEE Confidence 65433 355555555554444333222222 235667777655433 2222 589999999999888 999999 5 Q ss_pred EEEeeeecCCCccccccceeecCCCeEEEEecCCC---CceeEEEEEEeec Q lcl|NC_019408. 77 LLFPRVYLPKGFETKTSDYLIDEADVIWEIMSDLS---DPAKAVAILQVRT 124 (130) Q Consensus 77 ~LfP~v~Lp~gfe~~t~D~lId~~gv~weiis~~~---DPa~a~~~iQvR~ 124 (130) +++.+-.|. +++...| +|--+|+.|+||+-.. +...++|++|+|+ T Consensus 75 ~~~~a~~~~--~~P~~~D-~v~~~g~~~~Vi~v~p~~pag~~v~y~~q~Rk 122 (122) T protein:vir:80 75 VLISGSLKR--EAANIKG-DLFRGAEKWKMWNVVPLKPGPVNMLFKIKVSQ 122 (122) T ss_pred EEEeccccc--ccCCcCC-EEEeCCeeEEEEeccccCCCCceEEEEEEEeC Confidence 555555453 6777789 6777888999999865 5556799999999 No 3 >protein:vir:104346 Length: 123 # NCBI annotation: conserved phage-related protein # Family: family:all:704 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398974;genbank:gi:81343958;genbank:GeneID:3778878 Probab=97.42 E-value=4.6e-06 Score=49.82 Aligned_cols=119 Identities=15% Similarity=0.096 Sum_probs=90.0 Q ss_pred CchHHHHHHHHHHHHhhccchhhhheeeeccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecC-EEEE Q lcl|NC_019408. 1 MALEAFIQSQVLVAFNQLDDLCKRWTYVQRSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGE-KLLF 79 (130) Q Consensus 1 MgLk~~i~s~~~~aFdaLddl~~kvty~~~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgd-k~Lf 79 (130) |. =+.|++.-.+..+...+ +..++|..-.+.+|.|+.+..+..|.+.|+ ..+|+..|+.+++|.+ -|+.|| +++| T Consensus 1 mn-Y~~l~~~a~~lI~~f~~-~~gv~~~~t~~~~v~~v~G~ev~~p~~~~~-~~Gv~~~y~~r~IDG~-lIq~gD~~~i~ 76 (123) T protein:vir:10 1 MN-YNEIESITRDGINFFSD-ANGVYEMSTGAGYVEIVNGVEVEVPAQTFQ-LKGLVREIKTRDIDGE-FIQFGDKRGIF 76 (123) T ss_pred CC-hHHHHHHHHHHHHHhCC-CCCceEEecCCCeeeCCCCceeeccceeEe-eEEEeccCChhhccce-eeeeccEEEEE Confidence 87 66677776665554433 245777776788899999999999999997 6899999999999998 999999 6655 Q ss_pred eeeecCCCccccccceeecCCCeEEEEecCC-CCcee--EEEEEEeecccccC Q lcl|NC_019408. 80 PRVYLPKGFETKTSDYLIDEADVIWEIMSDL-SDPAK--AVAILQVRTSRIVT 129 (130) Q Consensus 80 P~v~Lp~gfe~~t~D~lId~~gv~weiis~~-~DPa~--a~~~iQvR~s~~~~ 129 (130) =+ ..|++..| +|.=+|..|+|++.. .-||+ ..|..|+|.-.--- T Consensus 77 ~a-----~~eik~Gd-~i~vdGe~~rVV~~~pikPa~~~v~y~~qlRrv~~~~ 123 (123) T protein:vir:10 77 TA-----QVEIKQGY-QIKVDGETFVVVDPRPVKPTGTTVGYRPILRRVATYG 123 (123) T ss_pred ec-----CceeccCC-EEEECCeEEEEecCCccCccceeEEEeeeeeeeeecC Confidence 32 45778999 688888899999864 34554 46778888644333 No 4 >protein:vir:79639 Length: 123 # NCBI annotation: gp39 # Family: family:all:704 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285528;genbank:gi:148734511;genbank:GeneID:5219997 Probab=96.72 E-value=1.4e-05 Score=47.13 Aligned_cols=118 Identities=18% Similarity=0.093 Sum_probs=85.3 Q ss_pred CchHHHHHHHHHHHHhhccchhhhheeeeccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecC-EEEE Q lcl|NC_019408. 1 MALEAFIQSQVLVAFNQLDDLCKRWTYVQRSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGE-KLLF 79 (130) Q Consensus 1 MgLk~~i~s~~~~aFdaLddl~~kvty~~~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgd-k~Lf 79 (130) |.+. .|++.....-+.+-| +...+|.---++.|.|+.+..+.-|...|. .++|+.+|+.+|+|.. -|+.|| |++| T Consensus 1 mNy~-~l~~~~~~~I~~fsd-~~G~~~~~t~~g~~~dv~G~ev~~p~~~~~-~~Gv~~~~~~reIDg~-lIq~gDvk~i~ 76 (123) T protein:vir:79 1 MNYE-QIRSMASAGINFFSD-GTGEFDCITQPGSVEIVGGIEVEKPEIKVK-IKGLVRAPRTREVDGE-VIRVTDKLGVF 76 (123) T ss_pred CchH-HHHHHHHHHHHhhcc-CCCceeeeecCcceeecCCeeccccceEEe-EEEEeecCCccccCCe-eEEeccEEEEE Confidence 7664 344444444443322 346677776788899999999999999997 7999999999999998 999999 7777 Q ss_pred -eeeecCCCccccccceeecCCCeEEEEecCC-CCceeE--EEEEEeecccccC Q lcl|NC_019408. 80 -PRVYLPKGFETKTSDYLIDEADVIWEIMSDL-SDPAKA--VAILQVRTSRIVT 129 (130) Q Consensus 80 -P~v~Lp~gfe~~t~D~lId~~gv~weiis~~-~DPa~a--~~~iQvR~s~~~~ 129 (130) |.+ |.++-| +|.=+|..|+|++.. .-||+- .|..|+|.----- T Consensus 77 ~a~v------eik~Gd-~i~vDge~~rVV~~~pvkPa~~~I~y~~qLRrv~~~~ 123 (123) T protein:vir:79 77 NADV------ELKNGY-QIDIDGERYVMVETRPIRPTSITVAYRPIMRRVAVHG 123 (123) T ss_pred ecce------eeccCC-EEEECCeEEEEecCccccchhhhhhhhhhhcccccCC Confidence 545 558888 666777799999864 456553 4677777433222 No 5 >protein:vir:107669 Length: 123 # NCBI annotation: hypothetical protein # Family: family:all:704 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003901;genbank:gi:45686317;genbank:GeneID:2773009 Probab=95.18 E-value=0.00023 Score=40.54 Aligned_cols=118 Identities=12% Similarity=0.010 Sum_probs=84.5 Q ss_pred CchHHHHHHHHHHHHhhccchhhhheeeecc-CCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecC-EEE Q lcl|NC_019408. 1 MALEAFIQSQVLVAFNQLDDLCKRWTYVQRS-GTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGE-KLL 78 (130) Q Consensus 1 MgLk~~i~s~~~~aFdaLddl~~kvty~~~S-g~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgd-k~L 78 (130) |. -+-|++...+-.+.+-|=- -.|.-.+ |+.|.|+.+....-|.+.|+ ..++..+|+.+|+|.. -|+.|| |++ T Consensus 1 mN-Y~~i~~~a~~~I~~fsd~~--g~~~l~t~~~~~~~v~G~Ev~~p~~~~~-~~G~~~~y~~reIDG~-lI~~gDvk~i 75 (123) T protein:vir:10 1 MN-YSQIERMARKGVAFFTDPS--RPMNLIKQGEYGYDENGFEIPPMEQVIP-ISGATRRPNAREIDGE-TIRASDILGI 75 (123) T ss_pred CC-hHHHHHHHHHHHhhhcCCC--CeEEeeeCCcccccCCCeecccCCeeee-eEEEEeeccccccccc-eeeeccEEEe Confidence 87 6677887777555442211 2355544 55699999999999999998 6899999999999998 999999 888 Q ss_pred EeeeecCCCccccccceeecCCCeEEEEecCC-CCcee--EEEEEEeecccccC Q lcl|NC_019408. 79 FPRVYLPKGFETKTSDYLIDEADVIWEIMSDL-SDPAK--AVAILQVRTSRIVT 129 (130) Q Consensus 79 fP~v~Lp~gfe~~t~D~lId~~gv~weiis~~-~DPa~--a~~~iQvR~s~~~~ 129 (130) |=+ .+|++.-| .|.=+|..|+|+... --||. ..|.+|+|.-.--- T Consensus 76 f~a-----~veik~Gd-~I~vDg~~~rVV~~~pvkPa~~~I~y~~qLRrv~~~~ 123 (123) T protein:vir:10 76 FNN-----DHEINEGD-YIEIDGIRHVVVDARPVQASLEPVAYRPVLRRVSVGG 123 (123) T ss_pred ecc-----ceeeccCC-EEEECCeEEEEecCcccchhhhhhhhhhhhceeccCC Confidence 833 24668888 566667799999764 34443 35778888533222 No 6 >protein:vir:95145 Length: 126 # NCBI annotation: hypothetical protein ORF014 # Family: family:all:704 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293421;genbank:gi:148912842;genbank:GeneID:5228220 Probab=93.57 E-value=0.0028 Score=34.58 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=78.0 Q ss_pred CchHHHHHHHHHHHHhhccchhhhheeee-ccCCCCCCCC---CCeeeecceeeecCceEEeeecch------hhccCCC Q lcl|NC_019408. 1 MALEAFIQSQVLVAFNQLDDLCKRWTYVQ-RSGTGVRDVE---SGKTVYPTTEIDIPKAVRVRFKKD------EKDKTGQ 70 (130) Q Consensus 1 MgLk~~i~s~~~~aFdaLddl~~kvty~~-~Sg~~V~d~~---s~ttT~pst~~~~p~aVf~~F~s~------erd~~g~ 70 (130) |+-=+-|++...+....-+. +++.-. ++|++.++.. .+.-|.-++.. ..||+-|+-+ -+|-. . T Consensus 1 ma~y~rl~ata~rLIaK~Gq---~~~~r~~~~~~~~DP~~p~~p~~~t~~d~p~---t~v~l~yd~r~~~~~~~idGt-~ 73 (126) T protein:vir:95 1 MAQFDRAIKTAQRLIAKNGE---KVKWRVIEDVTPTDPNKPWEPGPALPEDKDV---TICFLPVDRQTQETFNFIKGT-E 73 (126) T ss_pred CcchHHHHHHHHHHHHHhCC---ceEEEEEeeccCCCCccCCCCCCCceeeccc---ceEEecccccccchhhhcccc-e Confidence 98888888888777664444 344333 3567666666 66667767776 5899988655 24444 7 Q ss_pred eeecCEEEEeeeecCCCccccccceeecCCCeEEEEecC---CCCceeEEEEEEeec Q lcl|NC_019408. 71 VLVGEKLLFPRVYLPKGFETKTSDYLIDEADVIWEIMSD---LSDPAKAVAILQVRT 124 (130) Q Consensus 71 ilvgdk~LfP~v~Lp~gfe~~t~D~lId~~gv~weiis~---~~DPa~a~~~iQvR~ 124 (130) |.-||.+++=+ -|+ ++++.-|.+++ +|..|.|++- .-++...+|.|-..+ T Consensus 74 I~~GD~~i~i~-gl~--~ap~vgd~V~~-~g~~~~ivav~pl~P~gvavLy~l~~~~ 126 (126) T protein:vir:95 74 VPKGSVMGLMG-NVP--FAPNLKDVVIR-NGVELRLAYIDVLSPNGQKVLYTMVFQA 126 (126) T ss_pred eccCcEEEEec-ccc--cccccCceEEE-CcEEEEEEeeeeeCCCcceeeeeeeecC Confidence 89999655545 565 88999997777 8889999874 345667777765555 No 7 >protein:vir:78381 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:704 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110843;genbank:gi:134288604;genbank:GeneID:5179644 Probab=24.57 E-value=1.3 Score=19.97 Aligned_cols=114 Identities=17% Similarity=0.154 Sum_probs=58.1 Q ss_pred CchH--HHHHHHHHHHHhhccchhhhheeeeccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecCEEE Q lcl|NC_019408. 1 MALE--AFIQSQVLVAFNQLDDLCKRWTYVQRSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGEKLL 78 (130) Q Consensus 1 MgLk--~~i~s~~~~aFdaLddl~~kvty~~~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgdk~L 78 (130) ||-. .-+|--=-+... ....-|... +.|..+||+.-|.....+-++--=+||-+--.+. -.+--.|.+||-|+ T Consensus 1 m~t~fskrmqgvgtrll~---k~gstv~lv-r~g~k~wd~vlgeyiw~~d~vlplkavpvpvn~g-lvngttiqagdm~v 75 (119) T protein:vir:78 1 MGTSFSKRMQGVGTRLLS---KYGSTVNLV-RKGQKTWDPVLGEYVWGPDVVLPLKAVPVPVNAG-LVNGTTIQAGDMMV 75 (119) T ss_pred CCcchhhHHhhhhHHHHH---hhcchhhhh-hccchhhhhhhhhhccCCceeeeccccccccccc-ccccceeeccceee Confidence 5432 122211111111 111111111 3478899988877666555443225555555333 33444789999665 Q ss_pred EeeeecCCCccccccceeecCCCeEEEEecCCC---CceeEEEEEEeec Q lcl|NC_019408. 79 FPRVYLPKGFETKTSDYLIDEADVIWEIMSDLS---DPAKAVAILQVRT 124 (130) Q Consensus 79 fP~v~Lp~gfe~~t~D~lId~~gv~weiis~~~---DPa~a~~~iQvR~ 124 (130) =-.- .+-++-.| -+.=+|-.|.+++-+. +---..|-||+|+ T Consensus 76 kad~----svvpkm~d-kv~f~geqwsvvaiekkmvnddvvayfiqvrk 119 (119) T protein:vir:78 76 KADY----SVVPKMDD-KVRFSGEQWSVVAIEKKMVNDDVVAYFIQVRK 119 (119) T ss_pred eccc----eecccccc-ceeecCceeeeeeeehhhcchhheeheeeecC Confidence 3221 12233345 4555667899987543 1223568899999 No 8 >protein:vir:94992 Length: 78 # NCBI annotation: hypothetical protein # Family: family:all:704 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224023;genbank:gi:62327310;genbank:GeneID:5176820 Probab=23.20 E-value=2 Score=18.97 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=36.7 Q ss_pred CCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecCEEEEeeeecCCCccccccceeecCCCeEEEEecCCC--- Q lcl|NC_019408. 35 VRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGEKLLFPRVYLPKGFETKTSDYLIDEADVIWEIMSDLS--- 111 (130) Q Consensus 35 V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgdk~LfP~v~Lp~gfe~~t~D~lId~~gv~weiis~~~--- 111 (130) .|- ....-|-+++. +--.+ --.+--.|.+||-|+--.- .+-++-.| -+.=+|-.|.+++-+. T Consensus 1 ~w~---~d~vlplkavp------vpvn~-glvngttiqagdm~vkad~----svvpkm~d-kvqf~geqwsvvaiekkmv 65 (78) T protein:vir:94 1 MWG---PDVVLPLKAVP------VPVNA-GLVNGTTIQAGDMMVKADY----SVVPKMDD-KVQFSGEQWSVVAIEKKMV 65 (78) T ss_pred CCC---Cceeeeccccc------ccccc-cccccceeeccceEEeccc----eecccccc-ceeecCceeEEEeeeeccc Confidence 332 22334444432 22222 2233346888886543211 12223334 3334556899887543 Q ss_pred CceeEEEEEEeec Q lcl|NC_019408. 112 DPAKAVAILQVRT 124 (130) Q Consensus 112 DPa~a~~~iQvR~ 124 (130) +---..|-||+|+ T Consensus 66 nddvvayfiqvrk 78 (78) T protein:vir:94 66 NDDVVAYFIQVRK 78 (78) T ss_pred cccceeeeeeecC Confidence 2223568999999 No 9 >protein:vir:5977 Length: 109 # NCBI annotation: hypothetical protein # Family: family:all:788 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690677;genbank:geneid:6329133;genbank:gi:22855071;interpro:IPR013045;uniprot:O48446;genbank:GeneID:955315 Probab=4.93 E-value=14 Score=14.34 Aligned_cols=107 Identities=14% Similarity=0.009 Sum_probs=65.3 Q ss_pred hccchhhhheeeeccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCeeecCEEEEeeeecCCCcccccccee Q lcl|NC_019408. 17 QLDDLCKRWTYVQRSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQVLVGEKLLFPRVYLPKGFETKTSDYL 96 (130) Q Consensus 17 aLddl~~kvty~~~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~ilvgdk~LfP~v~Lp~gfe~~t~D~l 96 (130) -+++|-++++.++.+ .+.|-.++.+..=..-.++ .|=......+|..+-+++..--...|=-=+-| | +.+.+-| T Consensus 1 ~~~~L~~RI~i~~~~--~~~D~~G~~~~~w~~~~~~-WA~v~~~sg~E~~~a~~~~~~~~~~i~iRy~~-~--I~~~~Ri 74 (109) T protein:vir:59 1 MYEEFPDVITFQSYV--EQSNGEGGKTYKWVDEFTA-AAHVQPISQEEYYKAQQLQTPIGYNIYTPYDD-R--IDKKMRV 74 (109) T ss_pred CccccCccEEEEeee--eeeCCCCCeeeeeEeeEEE-EEEEecCChhheeeccccceeeEEEEEEeeCC-C--CCcccEE Confidence 677899999999876 4456666655321122221 23233346777777767655554444212233 3 4555544 Q ss_pred ecCCCeEEEEecCCCCceeEEEEEEeecc-cccCC Q lcl|NC_019408. 97 IDEADVIWEIMSDLSDPAKAVAILQVRTS-RIVTP 130 (130) Q Consensus 97 Id~~gv~weiis~~~DPa~a~~~iQvR~s-~~~~~ 130 (130) --+|.+|+|.|...|+-.-+..+.++-. .-.+- T Consensus 75 -~~~gr~y~I~~v~~d~~~~~~~l~~~~~e~g~~~ 108 (109) T protein:vir:59 75 -IYRGKIVTFIGDPVDLSGLQEITRIKGKEDGAYV 108 (109) T ss_pred -EECCeEEEEEeccCCCCCCeEEEEEEEEEeeccC Confidence 4566799999998899889999998743 22222 No 10 >protein:vir:95069 Length: 111 # NCBI annotation: ORF046 # Family: family:all:788 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240826;genbank:gi:66394713;genbank:GeneID:5133863 Probab=2.55 E-value=25 Score=12.88 Aligned_cols=105 Identities=20% Similarity=0.161 Sum_probs=56.5 Q ss_pred HHhhccchhhhheeeeccCCCCCCCCCCeeeecceeeecCceEEeeecchhhccCCCe--eecCEEEEeeeecCCCcccc Q lcl|NC_019408. 14 AFNQLDDLCKRWTYVQRSGTGVRDVESGKTVYPTTEIDIPKAVRVRFKKDEKDKTGQV--LVGEKLLFPRVYLPKGFETK 91 (130) Q Consensus 14 aFdaLddl~~kvty~~~Sg~~V~d~~s~ttT~pst~~~~p~aVf~~F~s~erd~~g~i--lvgdk~LfP~v~Lp~gfe~~ 91 (130) .||-.|..+.++|.++.--.|=-.-..++.+---| + .|--.+.+++|-=+--|. .+.=.|.+|=- + .- T Consensus 1 ~~~~y~efpHtItiqk~~~v~d~g~~~e~wvd~~T-v---~A~v~~ltg~Ey~~aqQmq~~v~~niy~rY~-~-----~I 70 (111) T protein:vir:95 1 MFNPFDEFPHTIEIGEVEVVGTHPKEYERFKSNET-I---KGFMDTPTSSETLKFHQMSKDFDRNLYTPYH-I-----PI 70 (111) T ss_pred CCCcchhcCceEEEEEEEEecCCCccceeecchhH-h---hhhccCCChHHHHHHhhhcCccceEEEEeee-C-----CC Confidence 89999999999998875411100001111111111 1 222223333332222111 11225555532 2 12 Q ss_pred ccceeecCCCeEEEEecCCCCceeEEEEEEeecccccCC Q lcl|NC_019408. 92 TSDYLIDEADVIWEIMSDLSDPAKAVAILQVRTSRIVTP 130 (130) Q Consensus 92 t~D~lId~~gv~weiis~~~DPa~a~~~iQvR~s~~~~~ 130 (130) +-|..|-=+|-+++|+|+-.|+---|-++|+|- +.+| T Consensus 71 ~~~mri~yegRi~~I~s~pvDqgg~hei~~~~~--k~~~ 107 (111) T protein:vir:95 71 TNKTLFNYEGKTYEVVGEPVDQGGQHEINLTRL--RVRP 107 (111) T ss_pred CccceEEECCeEEEEeccccCCCcchhhhhhee--eecc Confidence 334466666889999999999999999999884 4566 Done!